dtamayo commited on
Commit
2cf1738
·
1 Parent(s): b559047

update model

Browse files
README.md CHANGED
@@ -51,36 +51,33 @@ Training Hyperparemeters
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  >>> unmasker = pipeline('fill-mask', model='BSC-LT/MrBERT-biomed')
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- >>> pprint(unmasker("El tratamiento prolongado de<mask>puede resultar en hepatotoxicidad clínicamente relevante.",top_k=3))
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- >>> pprint(unmasker("El tratamiento prolongado de<mask>puede resultar en hepatotoxicidad clínicamente relevante.",top_k=3))
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- [{'score': 0.060546875,
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- 'sequence': 'El tratamiento prolongado de esteroides puede resultar en '
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- 'hepatotoxicidad clínicamente relevante.',
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  'token': 215060,
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  'token_str': 'esteroides'},
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- {'score': 0.056884765625,
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- 'sequence': 'El tratamiento prolongado de GC puede resultar en '
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- 'hepatotoxicidad clínicamente relevante.',
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- 'token': 97152,
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- 'token_str': 'GC'},
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- {'score': 0.0208740234375,
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- 'sequence': 'El tratamiento prolongado de AS puede resultar en '
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- 'hepatotoxicidad clínicamente relevante.',
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- 'token': 8976,
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- 'token_str': 'AS'}]
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  >>> pprint(unmasker("Prolonged use of<mask>can cause hepatotoxicity.", top_k=3))
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- [{'score': 0.0625,
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  'sequence': 'Prolonged use of steroids can cause hepatotoxicity.',
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  'token': 232800,
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  'token_str': 'steroids'},
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- {'score': 0.04052734375,
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  'sequence': 'Prolonged use of drugs can cause hepatotoxicity.',
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  'token': 101507,
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  'token_str': 'drugs'},
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- {'score': 0.0230712890625,
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- 'sequence': 'Prolonged use of ASA can cause hepatotoxicity.',
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- 'token': 174247,
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- 'token_str': 'ASA'}]
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  ```
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  ## EVALUATION: Retrieval
 
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  >>> unmasker = pipeline('fill-mask', model='BSC-LT/MrBERT-biomed')
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+ >>> pprint(unmasker("El uso prolongado de<mask>puede causar toxicidad hepática.",top_k=3))
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+ [{'score': 0.19885338842868805,
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+ 'sequence': 'El uso prolongado de esteroides puede causar toxicidad '
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+ 'hepática.',
 
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  'token': 215060,
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  'token_str': 'esteroides'},
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+ {'score': 0.03336358070373535,
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+ 'sequence': 'El uso prolongado de insulina puede causar toxicidad hepática.',
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+ 'token': 131044,
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+ 'token_str': 'insulina'},
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+ {'score': 0.022234393283724785,
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+ 'sequence': 'El uso prolongado de drogas puede causar toxicidad hepática.',
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+ 'token': 99191,
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+ 'token_str': 'drogas'}]
 
 
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  >>> pprint(unmasker("Prolonged use of<mask>can cause hepatotoxicity.", top_k=3))
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+ [{'score': 0.10918917506933212,
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  'sequence': 'Prolonged use of steroids can cause hepatotoxicity.',
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  'token': 232800,
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  'token_str': 'steroids'},
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+ {'score': 0.08295559883117676,
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  'sequence': 'Prolonged use of drugs can cause hepatotoxicity.',
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  'token': 101507,
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  'token_str': 'drugs'},
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+ {'score': 0.049813270568847656,
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+ 'sequence': 'Prolonged use of alcohol can cause hepatotoxicity.',
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+ 'token': 52167,
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+ 'token_str': 'alcohol'}]
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  ```
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  ## EVALUATION: Retrieval
config.json CHANGED
@@ -12,6 +12,7 @@
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  "cls_token_id": 1,
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  "decoder_bias": true,
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  "deterministic_flash_attn": false,
 
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  "embedding_dropout": 0.0,
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  "eos_token_id": 2,
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  "global_attn_every_n_layers": 3,
@@ -35,9 +36,10 @@
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  "num_hidden_layers": 22,
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  "pad_token_id": 3,
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  "position_embedding_type": "absolute",
 
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  "sep_token_id": 2,
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- "tie_word_embeddings": true,
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- "torch_dtype": "bfloat16",
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- "transformers_version": "4.48.0",
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  "vocab_size": 256128
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- }
 
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  "cls_token_id": 1,
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  "decoder_bias": true,
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  "deterministic_flash_attn": false,
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+ "dtype": "float32",
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  "embedding_dropout": 0.0,
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  "eos_token_id": 2,
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  "global_attn_every_n_layers": 3,
 
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  "num_hidden_layers": 22,
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  "pad_token_id": 3,
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  "position_embedding_type": "absolute",
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+ "repad_logits_with_grad": false,
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  "sep_token_id": 2,
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+ "sparse_pred_ignore_index": -100,
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+ "sparse_prediction": false,
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+ "transformers_version": "4.56.2",
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  "vocab_size": 256128
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+ }
model.safetensors CHANGED
@@ -1,3 +1,3 @@
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- size 1231552912
 
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special_tokens_map.json CHANGED
@@ -1,4 +1,7 @@
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  {
 
 
 
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  "bos_token": {
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  "content": "<s>",
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  "lstrip": false,
@@ -15,7 +18,7 @@
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  },
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  "mask_token": {
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  "content": "<mask>",
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- "lstrip": true,
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  "normalized": false,
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  "rstrip": false,
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  "single_word": false
@@ -34,4 +37,4 @@
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  "rstrip": false,
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  "single_word": false
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  }
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- }
 
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  {
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+ "additional_special_tokens": [
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+ "<mask>"
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+ ],
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  "bos_token": {
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  "content": "<s>",
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  "lstrip": false,
 
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  },
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  "mask_token": {
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  "content": "<mask>",
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+ "lstrip": false,
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  "normalized": false,
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  "rstrip": false,
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  "single_word": false
 
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  "rstrip": false,
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  "single_word": false
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  }
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+ }
tokenizer.json CHANGED
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- size 37007531
 
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+ size 37007965
tokenizer_config.json CHANGED
@@ -1090,8 +1090,9 @@
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  "bos_token": "<s>",
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  "clean_up_tokenization_spaces": false,
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  "eos_token": "</s>",
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- "mask_token": "<mask>",
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  "legacy": true,
 
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  "model_max_length": 8192,
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  "pad_token": "<pad>",
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  "sp_model_kwargs": {},
 
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  "bos_token": "<s>",
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  "clean_up_tokenization_spaces": false,
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  "eos_token": "</s>",
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+ "extra_special_tokens": {},
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  "legacy": true,
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+ "mask_token": "<mask>",
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  "model_max_length": 8192,
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  "pad_token": "<pad>",
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  "sp_model_kwargs": {},