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README.md
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### *Predicting Clinical Neuroplasticity via Deep Genomic Regression*
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[](https://huggingface.co/spaces/assix-research/stroke-recovery-analyser)
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---
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## ๐ Project Overview
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The model serves as the **Biological Modality** in a multi-modal fusion pipeline, intended to be integrated with MRI-based lesion volumetry to create personalized 3D recovery forecasts.
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---
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### ๐ฎ Live Demo
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**Test the model in real-time here:** [**Stroke-Recovery-Analyser Space**](https://huggingface.co/spaces/assix-research/stroke-recovery-analyser)
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## ๐ Technical Specifications
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- **Base Backbone:** `InstaDeepAI/nucleotide-transformer-v2-500m-multi-species`
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- **Architecture Head:** Custom Linear Regression Head for continuous score prediction.
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| **Optimizer** | AdamW (Weight Decay = 0.01) |
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## ๐ Dataset: ARC-Aphasia
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The model was fine-tuned on a curated genomic subset of the **Aphasia Recovery Cohort (ARC)**, consisting of 902 subjects. The training focus was localized to genetic regions associated with
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- **APOE** (Apolipoprotein E)
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## ๐ฅ๏ธ Usage & Inference
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To run this model locally on your DGX or a compatible Blackwell environment:
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print(f"Predicted WAB-AQ: {prediction:.2f}/100")
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```
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โ ๏ธ Clinical Disclaimer
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This model is a Biomedical Research Tool developed for the study of neuroplasticity.
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### *Predicting Clinical Neuroplasticity via Deep Genomic Regression*
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[](https://huggingface.co/spaces/assix-research/stroke-recovery-analyser)
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[](https://www.nvidia.com/en-us/data-center/dgx-spark/)
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---
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## ๐ Project Overview
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The model serves as the **Biological Modality** in a multi-modal fusion pipeline, intended to be integrated with MRI-based lesion volumetry to create personalized 3D recovery forecasts.
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---
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### ๐ฎ Live Demo
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**Test the model in real-time here:** [**Stroke-Recovery-Analyser Space**](https://huggingface.co/spaces/assix-research/stroke-recovery-analyser)
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---
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## ๐ Technical Specifications
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- **Base Backbone:** `InstaDeepAI/nucleotide-transformer-v2-500m-multi-species`
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- **Architecture Head:** Custom Linear Regression Head for continuous score prediction.
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| **Optimizer** | AdamW (Weight Decay = 0.01) |
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## ๐ Dataset: ARC-Aphasia
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The model was fine-tuned on a curated genomic subset of the **Aphasia Recovery Cohort (ARC)**, consisting of 902 subjects. The training focus was localized to genetic regions associated with neuroplasticity-related markers, including **BDNF**, **COMT**, and **APOE**.
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## ๐ฅ๏ธ Usage & Inference
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To run this model locally on your DGX or a compatible Blackwell environment:
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print(f"Predicted WAB-AQ: {prediction:.2f}/100")
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```
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โ ๏ธ Clinical Disclaimer
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This model is a Biomedical Research Tool developed for the study of neuroplasticity. Predicted WAB-AQ scores are statistical estimates based on a specific research cohort and must be interpreted by a neurologist in conjunction with structural neuroimaging (MRI/DTI).
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