Add Braindecode-format MIRepNet checkpoint
Browse files- LICENSE +21 -0
- README.md +80 -0
- config.json +25 -0
- convert_mirepnet_checkpoint.py +43 -0
- mirepnet_channels.json +47 -0
- model.safetensors +3 -0
- pytorch_model.bin +3 -0
LICENSE
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MIT License
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Copyright (c) 2025 Dingkun Liu
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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SOFTWARE.
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README.md
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---
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library_name: braindecode
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license: mit
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tags:
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- braindecode
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- eeg
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- motor-imagery
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- foundation-model
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---
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# MIRepNet
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Braindecode-format re-host of the official MIRepNet checkpoint released by
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Liu et al. The checkpoint can be loaded directly through Braindecode's standard
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Hugging Face integration:
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```python
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from braindecode.models import MIRepNet
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model = MIRepNet.from_pretrained("braindecode/mirepnet-pretrained")
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# Fine-tuning for another task replaces the released three-class head.
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model = MIRepNet.from_pretrained(
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"braindecode/mirepnet-pretrained",
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n_outputs=4,
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)
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```
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## Released configuration
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- 45 channels in the order stored in `mirepnet_channels.json`
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- 1,000 samples at 250 Hz
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- 256-dimensional embedding
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- 6 Transformer blocks with 8 heads
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- 3-output supervised pretraining head
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The paper's 8--30 Hz filtering, resampling, channel-template preparation, and
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Euclidean alignment are preprocessing steps and are not performed by the model.
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## Provenance and conversion
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- Official code: https://github.com/staraink/MIRepNet at revision
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`edb80d7605f75ba8b72b417a124cc9db07385f72`
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- Official checkpoint: https://huggingface.co/starself/MIRepNet at revision
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`9bac0439c0d3e9ffdb40ca675d61a51b439a446e`
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- Source file: `MIRepNet.pth`, SHA-256
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`432288958007e344a5a84a9ffe9d0e5e5c0cb616aef86c85522375a3f4da9aaf`
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All 109 downstream tensors were converted. The 34 pretraining-only tensors
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(`mask_token`, `decoder.*`, and the upstream `embedding.chan_embed.weight`,
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which is not used by the released forward pass) were intentionally omitted.
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Against the official implementation, maximum absolute error was `2.38e-7` for
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pooled features and `1.19e-7` for logits. The conversion is reproducible with
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`convert_mirepnet_checkpoint.py`.
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The source code and checkpoint are distributed under the MIT License. The
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original copyright notice is preserved in `LICENSE`.
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## Limitations
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The official repository does not document the semantic ordering of the three
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pretraining-head outputs. Replace the head with `n_outputs=...` and fine-tune it
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for downstream use unless that label mapping has been independently verified.
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Dataset licenses are separate from the checkpoint's MIT license.
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## Citation
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```bibtex
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@article{LIU2026115966,
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title = {MIRepNet: A pipeline and pre-trained model for EEG-based motor imagery classification},
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journal = {Knowledge-Based Systems},
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volume = {343},
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pages = {115966},
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year = {2026},
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issn = {0950-7051},
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doi = {10.1016/j.knosys.2026.115966},
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url = {https://www.sciencedirect.com/science/article/pii/S0950705126006921},
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author = {Dingkun Liu and Zhu Chen and Jingwei Luo and Shijie Lian and Yuheng Chen and Shaojie Hou and Xiaolian Zhu and Dongrui Wu}
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}
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```
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config.json
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{
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"n_outputs": 3,
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"n_chans": 45,
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"chs_info": null,
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"n_times": 1000,
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"input_window_seconds": null,
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"sfreq": 250,
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"embed_dim": 256,
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"n_filters_time": 64,
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"n_filters_spat": 128,
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"filter_time_length": 25,
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"pool_time_length": 75,
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"pool_time_stride": 15,
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"num_layers": 6,
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"num_heads": 8,
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"feedforward_expansion": 4,
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"activation": "torch.nn.modules.activation.ELU",
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"activation_trans": "torch.nn.modules.activation.GELU",
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"drop_prob": 0.5,
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"att_drop_prob": 0.5,
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"feedforward_drop_prob": 0.5,
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"attention_scale": null,
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"return_features": false,
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"braindecode_version": "1.8.0dev0"
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}
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convert_mirepnet_checkpoint.py
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"""Convert the official MIRepNet checkpoint to Braindecode Hub format."""
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from __future__ import annotations
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import argparse
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import hashlib
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from pathlib import Path
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import torch
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from braindecode.models import MIRepNet
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SOURCE_SHA256 = "432288958007e344a5a84a9ffe9d0e5e5c0cb616aef86c85522375a3f4da9aaf"
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def main() -> None:
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parser = argparse.ArgumentParser()
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parser.add_argument("source", type=Path)
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parser.add_argument("output", type=Path)
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args = parser.parse_args()
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if hashlib.sha256(args.source.read_bytes()).hexdigest() != SOURCE_SHA256:
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raise ValueError("Source checkpoint SHA-256 does not match the official file.")
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source = torch.load(args.source, map_location="cpu", weights_only=True)
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model = MIRepNet(n_chans=45, n_outputs=3, n_times=1000, sfreq=250)
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incompatible = model.load_state_dict(source, strict=False)
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expected_unexpected = {
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"mask_token",
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"embedding.chan_embed.weight",
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*(key for key in source if key.startswith("decoder.")),
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}
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if (
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incompatible.missing_keys
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or set(incompatible.unexpected_keys) != expected_unexpected
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):
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raise RuntimeError(f"Unexpected conversion result: {incompatible}")
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model.save_pretrained(args.output)
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if __name__ == "__main__":
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main()
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mirepnet_channels.json
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[
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"F7",
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"F5",
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"F3",
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"F1",
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"FZ",
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"F2",
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"F4",
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"F6",
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"F8",
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"FT7",
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"FC5",
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"FC3",
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"FC1",
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"FCZ",
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"FC2",
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"FC4",
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"FC6",
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"FT8",
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"T7",
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"C5",
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"C3",
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"C1",
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"CZ",
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"C2",
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"C4",
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"C6",
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"T8",
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"TP7",
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"CP5",
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"CP3",
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"CP1",
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"CPZ",
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"CP2",
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"CP4",
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"CP6",
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"TP8",
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"P7",
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"P5",
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"P3",
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"P1",
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"PZ",
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"P2",
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"P4",
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"P6",
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"P8"
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]
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model.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:a3a7eb0f100b703cd40ee2ed634dbc04d1f6ae04931404299dc2f81c4175559b
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size 20583836
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pytorch_model.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:59aae4feec85074ba7ab7f7e492b281cb861f0e529d5bf1dbd81c0ca04b2a3aa
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size 20613566
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