Instructions to use ctheodoris/Geneformer with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use ctheodoris/Geneformer with Transformers:
# Use a pipeline as a high-level helper from transformers import pipeline pipe = pipeline("fill-mask", model="ctheodoris/Geneformer")# Load model directly from transformers import AutoTokenizer, AutoModelForMaskedLM tokenizer = AutoTokenizer.from_pretrained("ctheodoris/Geneformer") model = AutoModelForMaskedLM.from_pretrained("ctheodoris/Geneformer", device_map="auto") - Inference
- Notebooks
- Google Colab
- Kaggle
Upload ensembl_mapping_dict_gc30M.pkl
Browse files
geneformer/gene_dictionaries_30m/ensembl_mapping_dict_gc30M.pkl
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version https://git-lfs.github.com/spec/v1
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oid sha256:eac0fb0b3007267871b6305ac0003ceba19d4f28d85686cb9067ecf142787869
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size 584125
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