Christina Theodoris commited on
Commit ·
79788b6
1
Parent(s): cf0d7d4
update type of null_dict_list in docstring
Browse files
geneformer/in_silico_perturber_stats.py
CHANGED
|
@@ -19,7 +19,7 @@ Geneformer in silico perturber stats generator.
|
|
| 19 |
|
| 20 |
**Description:**
|
| 21 |
|
| 22 |
-
|
|
| 23 |
| Input data is raw in silico perturbation results in the form of dictionaries outputted by ``in_silico_perturber``.
|
| 24 |
|
| 25 |
"""
|
|
@@ -864,8 +864,8 @@ class InSilicoPerturberStats:
|
|
| 864 |
| Path to directory where perturbation data will be saved as .csv
|
| 865 |
output_prefix : str
|
| 866 |
| Prefix for output .csv
|
| 867 |
-
null_dict_list: dict
|
| 868 |
-
| List of loaded null
|
| 869 |
|
| 870 |
**Outputs:**
|
| 871 |
|
|
|
|
| 19 |
|
| 20 |
**Description:**
|
| 21 |
|
| 22 |
+
| Aggregates data or calculates stats for in silico perturbations based on type of statistics specified in InSilicoPerturberStats.
|
| 23 |
| Input data is raw in silico perturbation results in the form of dictionaries outputted by ``in_silico_perturber``.
|
| 24 |
|
| 25 |
"""
|
|
|
|
| 864 |
| Path to directory where perturbation data will be saved as .csv
|
| 865 |
output_prefix : str
|
| 866 |
| Prefix for output .csv
|
| 867 |
+
null_dict_list: list[dict]
|
| 868 |
+
| List of loaded null distribution dictionary if more than one comparison vs. the null is to be performed
|
| 869 |
|
| 870 |
**Outputs:**
|
| 871 |
|