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Geneformer

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Geneformer / geneformer /__init__.py

Commit History

fix cell state gene embeddings bug (#345)
c0e7b19
verified

ctheodoris commited on

Prevent ruff/isort on init
941390d

Christina Theodoris commited on

Add classifier module and examples
9e9cca9

Christina Theodoris commited on

Add function to extract and plot cell embeddings
d154fee

Christina Theodoris commited on

Subclass collator for cell classification
402ba9b

Christina Theodoris commited on

add in silico perturbation module
efec1c4

Christina Theodoris commited on

Add data collator for cell classification and example for cell classification
088ea6e

Christina Theodoris commited on

Add Geneformer tokenizer and updated model card
5426788

Christina Theodoris commited on