task stringclasses 3
values | instruction stringclasses 6
values | input stringlengths 318 2.22k | output stringlengths 49 891 | meta unknown |
|---|---|---|---|---|
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Elevated cell-free mitochondrial DNA levels are associated with mortality.
CANDIDATE_ABSTRACT:
TITLE: Efficacy of the 6-month thrice-weekly regimen in the treatment of new sputum smear-positive pulmonary tuberculosis under clinical trial conditions.
ABSTRACT: BACKGROUND Under the Revised National Tuberculosis C... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 375,
"doc_id": "341324",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Human embryonic stem cells give rise to cell types from all three embryonic germ layers.
CANDIDATE_ABSTRACT:
TITLE: microRNAs: A Safeguard against Turmoil?
ABSTRACT: Emerging data suggest that microRNAs (miRNAs) are instrumental in a variety of stress responses in addition to their more recognized role in devel... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 529,
"doc_id": "2251426",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Taking 400mg of α-tocopheryl acetate helps to prevent prostate cancer.
CANDIDATE_PASSAGE:
Vegan proteins may reduce risk of cancer, obesity, and cardiovascular disease by promoting increased glucagon activity. Amino acids modulate the secretion of both insulin and glucagon; the composition of dietary protein th... | {"label": 1, "rationale": "The passage is loosely related but does not directly answer the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1140",
"doc_id": "6327940",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Bone marrow cells contribute to adult macrophage compartments.
CANDIDATE_PASSAGE:
Core binding factors are necessary for natural killer cell development and cooperate with Notch signaling during T-cell specification. CBFbeta is the non-DNA binding subunit of the core binding factors (CBFs). Mice with reduced CB... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "183",
"doc_id": "28206748",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: PrimPol generates short DNA replication intermediates on the leading strand during DNA replication.
CANDIDATE_PASSAGE:
Managing finances of shipping living donor kidneys for donor exchanges. Kidney donor exchanges enable recipients with immunologically incompatible donors to receive compatible living donor graf... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "970",
"doc_id": "21203899",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Auditory entrainment is strengthened when people see congruent visual and auditory information.
CANDIDATE_PASSAGE:
p53 induces formation of NEAT1 lncRNA-containing paraspeckles that modulate replication stress response and chemosensitivity In a search for mediators of the p53 tumor suppressor pathway, which ind... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "141",
"doc_id": "21521236",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Incidence of 10/66 dementia is higher than the incidence of DSM-IV dementia.
CANDIDATE_PASSAGE:
Association between smoking and risk of bladder cancer among men and women. CONTEXT Previous studies indicate that the population attributable risk (PAR) of bladder cancer for tobacco smoking is 50% to 65% in men and... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "591",
"doc_id": "17124832",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Healthy volunteers exhibit rapid and transient increase of cellular ATP after being bolus-injected with fructose.
CANDIDATE_ABSTRACT:
TITLE: Alterations in liver ATP homeostasis in human nonalcoholic steatohepatitis: a pilot study.
ABSTRACT: CONTEXT The mechanisms that drive progression from fatty liver to stea... | {"label": "REFUTES", "rationale": "Evidence snippet: \"Liver ATP levels were similar in the 2 groups before fructose infusion and decreased similarly in both after fructose infusion (P = .01 vs initial ATP levels).\". The claim is refutes by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 504,
"doc_id": "10883736",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: TRAP+ osteoclasts regulate mature osteoblast maintenance.
CANDIDATE_ABSTRACT:
TITLE: Neutrophil extracellular traps enriched in oxidized mitochondrial DNA are interferogenic and contribute to lupus-like disease
ABSTRACT: Neutrophil extracellular traps (NETs) are implicated in autoimmunity, but how they are gene... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 1138,
"doc_id": "1049501",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Physical activity level has no association with the difference in maximal oxygen consumption between black and white youth.
CANDIDATE_PASSAGE:
Prevalence of the Metabolic Syndrome Among Us Adults: Findings From the Third National Health and Nutrition Examination Survey Metabolic syndrome is diagnosed when three... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "945",
"doc_id": "75636923",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Radioiodine treatment of non-toxic multinodular goitre reduces thyroid volume.
CANDIDATE_PASSAGE:
Body-mass index and risk of 22 specific cancers: a population-based cohort study of 5·24 million UK adults BACKGROUND High body-mass index (BMI) predisposes to several site-specific cancers, but a large-scale syste... | {"label": 1, "rationale": "The passage is loosely related but does not directly answer the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1012",
"doc_id": "4828631",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Answer with yes, no, or maybe from the abstract, then provide a short rationale. Return JSON label and rationale. | QUESTION: Is activation of microglia within paraventricular nucleus of hypothalamus involved in maintenance of established hypertension?
ABSTRACT:
Inflammation within paraventricular nucleus of the hypothalamus (PVN), a key circulatory control center in the hypothalamus, is an important pathology of sympathetic hypera... | {"label": "no", "rationale": "Activated microglia with morphological alteration within PVN are not involved in the maintenance of established severe hypertension, and inflammation within PVN could not be the therapeutic target of established hypertension."} | {
"source_dataset": "PubMedQA",
"source_split": "pqa_artificial",
"task_name": "qa",
"pubid": 26874752,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Broadly HIV-1 Neutralizing Antibodies (bnAb) 10EB have no affinity for phospholipids.
CANDIDATE_PASSAGE:
Reversing the tide — diagnosis and prevention of T2DM in populations of African descent Abstract | Populations of African descent are at the forefront of the worldwide epidemic of type 2 diabetes mellitus (T... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "189",
"doc_id": "12662435",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Integrated care is ineffective at tackling multiple comorbidities.
CANDIDATE_PASSAGE:
Malaria eradication back on the table. After a lapse of almost 40 years, malaria eradication is back on the global health agenda. Inspired by the Gates Malaria Forum in October 2007,1,2 key organizations are starting to debate... | {"label": 1, "rationale": "The passage is loosely related but does not directly answer the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "647",
"doc_id": "37248570",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Answer with yes, no, or maybe from the abstract, then provide a short rationale. Return JSON label and rationale. | QUESTION: Are ribosomal protein mRNAs translationally-regulated during human dendritic cells activation by LPS?
ABSTRACT:
Dendritic cells (DCs) are the sentinels of the mammalian immune system, characterized by a complex maturation process driven by pathogen detection. Although multiple studies have described the anal... | {"label": "yes", "rationale": "Our observations highlight the importance of translation regulation during the immune response, and may favor the identification of novel protein networks relevant for immunity. Our study also provides information on the potential absence of correlation between gene expression and protein... | {
"source_dataset": "PubMedQA",
"source_split": "pqa_artificial",
"task_name": "qa",
"pubid": 19943945,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Determine whether the abstract supports a yes/no/maybe answer. Return JSON label and rationale. | QUESTION: Does activation of beta3 adrenergic receptor decrease DNA synthesis in human skin fibroblasts via cyclic GMP/nitric oxide pathway?
ABSTRACT:
Evidences have shown that beta1 and beta2 adrenoceptors co-exist in human fibroblasts, but it is not yet clear the functional expression of beta3 adrenoceptor in these ... | {"label": "yes", "rationale": "beta3 adrenoceptor activation exerts inhibitory effect on human fibroblast DNA synthesis as a result of the activation of NO-cGMP pathway and the inhibition of adenylate cyclase activity. The mechanism appears to occurs secondarily to stimulation of PLC and CaM. This in turn triggers casc... | {
"source_dataset": "PubMedQA",
"source_split": "pqa_artificial",
"task_name": "qa",
"pubid": 16301818,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Chinese individuals with TT homozygosity in the MTHFR gene are less vulnerable to strokes caused by low levels of folate intake.
CANDIDATE_PASSAGE:
Adult cervicocerebral artery dissection: a single-center study of 301 Finnish patients. BACKGROUND AND PURPOSE There are only few small studies assessing potential ... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "253",
"doc_id": "14726759",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: New drugs for tuberculosis often do not penetrate the necrotic portion of a tuberculosis lesion in high concentrations.
CANDIDATE_ABSTRACT:
TITLE: The association between sterilizing activity and drug distribution into tuberculosis lesions
ABSTRACT: Finding new treatment-shortening antibiotics to improve cure r... | {"label": "REFUTES", "rationale": "Evidence snippet: \"Rifampicin even accumulates in necrotic caseum, a critical lesion site where persisting tubercle bacilli reside.\". The claim is refutes by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 847,
"doc_id": "16787954",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Deamination of cytidine to uridine on the minus strand of viral DNA results in catastrophic G-to-A mutations in the viral genome.
CANDIDATE_PASSAGE:
IL-17 promotes tumor development through the induction of tumor promoting microenvironments at tumor sites and myeloid-derived suppressor cells. The role of immune... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "314",
"doc_id": "25726838",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Genetic deletion of JAM-A increases gut permeability.
CANDIDATE_PASSAGE:
Compromised intestinal epithelial barrier induces adaptive immune compensation that protects from colitis. Mice lacking junctional adhesion molecule A (JAM-A, encoded by F11r) exhibit enhanced intestinal epithelial permeability, bacterial ... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "461",
"doc_id": "40096222",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: JMJD6 catalyzes the hydroxylation of C-terminal lysine and supresses transcriptional activity.
CANDIDATE_ABSTRACT:
TITLE: Isolation from African Sykes' monkeys (Cercopithecus mitis) of a lentivirus related to human and simian immunodeficiency viruses.
ABSTRACT: Analysis of serum samples from 100 wild-caught or ... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 661,
"doc_id": "798152",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Type 1 Diabetes is associated with subtle perturbations in T reg development.
CANDIDATE_PASSAGE:
Vegetarian diet improves insulin resistance and oxidative stress markers more than conventional diet in subjects with Type 2 diabetes AIMS The aim of this study was to compare the effects of calorie-restricted veget... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1334",
"doc_id": "5687200",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Recurrent mutations occur frequently within CTCF anchor sites adjacent to oncogenes.
CANDIDATE_ABSTRACT:
TITLE: Hyperglycemia is associated with increased bone mineral density and decreased trabecular bone score in elderly Japanese men: The Fujiwara-kyo osteoporosis risk in men (FORMEN) study.
ABSTRACT: PURPOSE... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 1024,
"doc_id": "1711571",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Hypothalamic glutamate neurotransmission is unrelated to energy balance.
CANDIDATE_ABSTRACT:
TITLE: Topographic mapping of VMH → arcuate nucleus microcircuits and their reorganization by fasting
ABSTRACT: In the hypothalamic arcuate nucleus (ARC), pro-opiomelanocortin (POMC) neurons inhibit feeding and neuropep... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 541,
"doc_id": "25007443",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Klf4 is important for proper myeloid cell differentiation.
CANDIDATE_ABSTRACT:
TITLE: Kruppel-like factor 4 is essential for inflammatory monocyte differentiation in vivo.
ABSTRACT: Several members of the Kruppel-like factor (KLF) family of transcription factors play important roles in differentiation, survival... | {"label": "SUPPORTS", "rationale": "Evidence snippet: \"In addition, inducible expression of KLF4 in the HL60 human acute myeloid leukemia cell line stimulated monocytic differentiation and enhanced 12-O-tetradecanoylphorbol 13-acetate induced macrophage differentiation, but blocked all-trans-retinoic acid induced gran... | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 668,
"doc_id": "25148216",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Chenodeosycholic acid treatment reduces whole-body energy expenditure.
CANDIDATE_ABSTRACT:
TITLE: The Bile Acid Chenodeoxycholic Acid Increases Human Brown Adipose Tissue Activity.
ABSTRACT: The interest in brown adipose tissue (BAT) as a target to combat metabolic disease has recently been renewed with the dis... | {"label": "REFUTES", "rationale": "Evidence snippet: \"Whole-body energy expenditure was also increased upon CDCA treatment.\". The claim is refutes by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 249,
"doc_id": "1568684",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Hypothalamic glutamate neurotransmission is unrelated to energy balance.
CANDIDATE_PASSAGE:
Glutamate mediates the function of melanocortin receptor 4 on Sim1 neurons in body weight regulation. The melanocortin receptor 4 (MC4R) is a well-established mediator of body weight homeostasis. However, the neurotransm... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "541",
"doc_id": "45154987",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Physical activity level is associated with the difference in maximal oxygen consumption between black and white youth.
CANDIDATE_PASSAGE:
Effect of Health Literacy on Quality of Life amongst Patients with Ischaemic Heart Disease in Australian General Practice BACKGROUND Appropriate understanding of health infor... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "946",
"doc_id": "17693849",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: 90% of patients with melanoma and an objective response to PD-1 blockade will experience a progression in their melanoma.
CANDIDATE_PASSAGE:
Partitioning the symptoms of hypoglycaemia using multi-sample confirmatory factor analysis The allocation of hypoglycaemic symptoms to autonomie or neuroglycopenic groups ... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "24",
"doc_id": "1904291",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Autologous transplantation of mesenchymal stem cells has lower rates of rejection than induction therapy with anti-interleukin-2 receptor antibodies.
CANDIDATE_PASSAGE:
FBW7 ubiquitin ligase: a tumour suppressor at the crossroads of cell division, growth and differentiation FBW7 (F-box and WD repeat domain-cont... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "146",
"doc_id": "13277623",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Increased microtubule acetylation worsens interference of axonal transport caused by LRRK2 Roc-COR domain mutations.
CANDIDATE_PASSAGE:
Estimation of nuclear DNA content in plants using flow cytometry Flow cytometry (FCM) using DNA-selective fluorochromes is now the prevailing method for the measurement of nucl... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "615",
"doc_id": "8025177",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Inhibiting glucose-6-phospate dehydrogenase improves lipogenesis by deactivating LKB1-AMPK signaling.
CANDIDATE_ABSTRACT:
TITLE: 6-phosphogluconate dehydrogenase links oxidative PPP, lipogenesis and tumor growth by inhibiting LKB1-AMPK signaling
ABSTRACT: The oxidative pentose phosphate pathway (PPP) contribute... | {"label": "REFUTES", "rationale": "Evidence snippet: \"We found that suppression of 6PGD decreased lipogenesis and RNA biosynthesis and elevated ROS levels in cancer cells, attenuating cell proliferation and tumour growth. 6PGD-mediated production of ribulose-5-phosphate (Ru-5-P) inhibits AMPK activation by disrupting ... | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 635,
"doc_id": "1686997",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Replacement of histone H2A with H2A.Z accelerates gene activation in yeasts by destabilizing +1 nucleosomes.
CANDIDATE_PASSAGE:
Regulated nucleo/cytoplasmic exchange of HOG1 MAPK requires the importin beta homologs NMD5 and XPO1. MAP kinase signaling modules serve to transduce extracellular signals to the nucle... | {"label": 1, "rationale": "The passage is loosely related but does not directly answer the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1040",
"doc_id": "33063763",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: There is no known interaction between Pioneer factor OCT3/4 and major chromatin remodeling factors.
CANDIDATE_ABSTRACT:
TITLE: Mechanisms linking obesity to insulin resistance and type 2 diabetes
ABSTRACT: Obesity is associated with an increased risk of developing insulin resistance and type 2 diabetes. In obes... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 1294,
"doc_id": "120626",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Reduced responsiveness to interleukin-2 in regulatory T cells is associated with greater resistance to autoimmune diseases such as Type 1 Diabetes.
CANDIDATE_PASSAGE:
Anti-CD3 monoclonal antibody in new-onset type 1 diabetes mellitus. BACKGROUND Type 1 diabetes mellitus is a chronic autoimmune disease caused by... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1029",
"doc_id": "36642096",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Increased microtubule acetylation exacerbates LRRK2 Roc-COR domain mutation induced locomotor deficits.
CANDIDATE_PASSAGE:
Increasing microtubule acetylation rescues axonal transport and locomotor deficits caused by LRRK2 Roc-COR domain mutations Leucine-rich repeat kinase 2 (LRRK2) mutations are the most commo... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "612",
"doc_id": "9638032",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Free histones are degraded by a Rad53-dependent mechanism once DNA has been replicated.
CANDIDATE_PASSAGE:
N348I in HIV-1 reverse transcriptase can counteract the nevirapine-mediated bias toward RNase H cleavage during plus-strand initiation. Drug resistance-associated mutations in HIV-1 reverse transcriptase (... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "436",
"doc_id": "2319305",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: VgrG (Tssl) protein punctures membranes by forming a spike at the tip of the tube apparatus.
CANDIDATE_PASSAGE:
Comparison of the intrinsic kinase activity and substrate specificity of c-Abl and Bcr-Abl. We studied the intrinsic tyrosine kinase activity and substrate specificity of c-Abl and Bcr-Abl protein tyr... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1366",
"doc_id": "30379039",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: The RANK-RANK-Ligand (RANKL) pathway is involved in the development of Aire-expressing medullary thymic epithelial cells (mTECs).
CANDIDATE_PASSAGE:
Differentiation of effector CD4 T cell populations (*). CD4 T cells play critical roles in mediating adaptive immunity to a variety of pathogens. They are also inv... | {"label": 1, "rationale": "The passage is loosely related but does not directly answer the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1181",
"doc_id": "13798951",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Answer with yes, no, or maybe from the abstract, then provide a short rationale. Return JSON label and rationale. | QUESTION: Do contribution of method of conception on pregnancy outcome after the 11-13 weeks scan?
ABSTRACT:
To examine the effect of method of conception on adverse pregnancy outcome after the 11-13 weeks scan. Prospective screening study for adverse obstetric outcomes in women with singleton pregnancies and live fet... | {"label": "yes", "rationale": "Conception by IVF and OI is associated with increased risk for adverse pregnancy outcome."} | {
"source_dataset": "PubMedQA",
"source_split": "pqa_artificial",
"task_name": "qa",
"pubid": 21346323,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Men are more susceptible to death due to pneumonia when compared to women.
CANDIDATE_PASSAGE:
The progression from hypertension to congestive heart failure. OBJECTIVES - To study the relative and population-attributable risks of hypertension for the development of congestive heart failure (CHF), to assess the t... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "767",
"doc_id": "31889025",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Progerin induces premature aging in stem cells.
CANDIDATE_PASSAGE:
Ionizing radiation-induced long-term expression of senescence markers in mice is independent of p53 and immune status. Exposure to IR has been shown to induce the formation of senescence markers, a phenotype that coincides with lifelong delayed ... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "979",
"doc_id": "31293581",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Answer with yes, no, or maybe from the abstract, then provide a short rationale. Return JSON label and rationale. | QUESTION: Do sOD1-G93A mice exhibit muscle-fiber-type-specific decreases in glucose uptake in the absence of whole-body changes in metabolism?
ABSTRACT:
Skeletal muscles play an important role in systemic glucose homeostasis and are purported to be the origin of the altered metabolic state observed in amyotrophic late... | {"label": "yes", "rationale": "These results suggest that alterations in muscle metabolism occur in a fiber-type-specific manner in ALS, but do not necessarily lead to whole-body metabolic changes in SOD1-G93A mice."} | {
"source_dataset": "PubMedQA",
"source_split": "pqa_artificial",
"task_name": "qa",
"pubid": 24021858,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: MafA ubiquitination increases the recruitment of coavtivator P/CAF by MafA.
CANDIDATE_ABSTRACT:
TITLE: GSK-3-mediated phosphorylation enhances Maf-transforming activity.
ABSTRACT: The Maf oncoproteins are b-Zip transcription factors of the AP-1 superfamily. They are involved in developmental, metabolic, and tum... | {"label": "SUPPORTS", "rationale": "Evidence snippet: \"Paradoxically, this phosphorylation increases MafA-transcriptional activity through the recruitment of the coactivator P/CAF.\". The claim is supports by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 748,
"doc_id": "11291348",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Dscam1 acts as a hypervariable pattern-recognition receptor for the immune system.
CANDIDATE_ABSTRACT:
TITLE: AgDscam, a Hypervariable Immunoglobulin Domain-Containing Receptor of the Anopheles gambiae Innate Immune System
ABSTRACT: Activation of the insect innate immune system is dependent on a limi... | {"label": "SUPPORTS", "rationale": "Evidence snippet: \"AgDscam is mediating phagocytosis of bacteria with which it can associate and defend against in a splice form–specific manner.\". The claim is supports by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 356,
"doc_id": "6144337",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Alteration of origin firing causes changes in termination zones of Okazaki fragments.
CANDIDATE_ABSTRACT:
TITLE: Reliability of patient responses in pay for performance schemes: analysis of national General Practitioner Patient Survey data in England
ABSTRACT: OBJECTIVE To assess the robustness of patient respo... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 105,
"doc_id": "841371",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Inhibiting focal adhesion formation increases the rate at which cells convert mechanical strain into inflammation and fibrosis.
CANDIDATE_PASSAGE:
Fingolimod provides long-term protection in rodent models of cerebral ischemia. OBJECTIVE The sphingosine-1-phosphate (S1P) receptor agonist fingolimod (FTY720), tha... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "633",
"doc_id": "33884866",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Prescribed exercise training improves quality of life.
CANDIDATE_ABSTRACT:
TITLE: Effects of exercise training on health status in patients with chronic heart failure: HF-ACTION randomized controlled trial.
ABSTRACT: CONTEXT Findings from previous studies of the effects of exercise training on patient-reported ... | {"label": "SUPPORTS", "rationale": "Evidence snippet: \"CONCLUSIONS Exercise training conferred modest but statistically significant improvements in self-reported health status compared with usual care without training.\". The claim is supports by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 965,
"doc_id": "40817021",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: siRNA knockdown of A20 slows tumor progression in an in vivo murine xenograft model.
CANDIDATE_PASSAGE:
A20 is overexpressed in glioma cells and may serve as a potential therapeutic target. OBJECTIVE A20 is a TNF-inducible primary response gene, which has been found to have antiapoptotic function in several can... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1404",
"doc_id": "38355793",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Answer with yes, no, or maybe from the abstract, then provide a short rationale. Return JSON label and rationale. | QUESTION: Rectal cancer threatening or affecting the prostatic plane: is partial prostatectomy oncologically adequate?
ABSTRACT:
A multicentre, retrospective study was conducted of patients with rectal cancer threatening or affecting the prostatic plane, but not the bladder, judged by magnetic resonance imaging (MRI).... | {"label": "maybe", "rationale": "Preoperative chemoradiation is mandatory in male patients with a threatened or affected anterior circumferential margin on preoperative MRI. In patients with preoperative prostatic infiltration, prostatic resection is necessary. In this group of patients partial prostatectomy seems to b... | {
"source_dataset": "PubMedQA",
"source_split": "pqa_labeled",
"task_name": "qa",
"pubid": 25735444,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: There is an inverse relationship between hip fractures and statin use.
CANDIDATE_ABSTRACT:
TITLE: HMG-CoA reductase inhibitors and the risk of hip fractures in elderly patients.
ABSTRACT: CONTEXT Recent animal studies have found that 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) lipid-lowering drugs (statins)... | {"label": "SUPPORTS", "rationale": "Evidence snippet: \"After adjusting for extent of statin use in the prior 3 years, current use (on the index date) was associated with a 71% reduction in risk (adjusted OR, 0.29; 95% CI, 0.10-0.81).\". The claim is supports by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 1290,
"doc_id": "4687948",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Ly6C hi monocytes have a lower inflammatory capacity compared to their Ly6C lo counterparts.
CANDIDATE_PASSAGE:
Coxibs and other nonsteroidal anti-inflammatory drugs in animal models of cancer chemoprevention. Coxibs, including celecoxib, and other nonsteroidal anti-inflammatory drugs (NSAID), including aspirin... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "727",
"doc_id": "6407356",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Pre-mRNAs associated with spliceosomal components are more stable than unassociated splicing substrates.
CANDIDATE_PASSAGE:
Analysis of the interaction of primate retroviruses with the human RNA interference machinery. The question of whether retroviruses, including human immunodeficiency virus type 1 (HIV-1), ... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "964",
"doc_id": "5867846",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Glycan adaptation involves insertion-deletion events.
CANDIDATE_PASSAGE:
Broad neutralization coverage of HIV by multiple highly potent antibodies Broadly neutralizing antibodies against highly variable viral pathogens are much sought after to treat or protect against global circulating viruses. Here we probed ... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "473",
"doc_id": "4373433",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Ca2+ cycling controls whole-body energy homeostasis in beige fat.
CANDIDATE_ABSTRACT:
TITLE: UCP1-independent signaling involving SERCA2b-mediated calcium cycling regulates beige fat thermogenesis and systemic glucose homeostasis
ABSTRACT: Uncoupling protein 1 (UCP1) plays a central role in nonshivering thermog... | {"label": "SUPPORTS", "rationale": "Evidence snippet: \"Conversely, enhanced Ca2+ cycling by activation of α1- and/or β3-adrenergic receptors or the SERCA2b-RyR2 pathway stimulates UCP1-independent thermogenesis in beige adipocytes. In the absence of UCP1, beige fat dynamically expends glucose through enhanced glycolys... | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 220,
"doc_id": "19205437",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Diabetes remission occurs more in people treated with conventional therapy than in people treated with laparoscopic adjustable gastric banding surgery.
CANDIDATE_ABSTRACT:
TITLE: Adjustable gastric banding and conventional therapy for type 2 diabetes: a randomized controlled trial.
ABSTRACT: CONTEXT Observation... | {"label": "REFUTES", "rationale": "Evidence snippet: \"Remission of type 2 diabetes was achieved by 22 (73%) in the surgical group and 4 (13%) in the conventional-therapy group.\". The claim is refutes by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 341,
"doc_id": "7098463",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Chenodeoxycholic acid treatment decreases brown adipose tissue activity.
CANDIDATE_ABSTRACT:
TITLE: The behaviour change wheel: A new method for characterising and designing behaviour change interventions
ABSTRACT: BACKGROUND Improving the design and implementation of evidence-based practice depends on successf... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 250,
"doc_id": "704526",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Depletion of nitric oxide is responsible for vasospasm.
CANDIDATE_PASSAGE:
Angiopoietin-2 is increased in sepsis and inversely associated with nitric oxide-dependent microvascular reactivity INTRODUCTION Angiopoietin-2 (ang-2), an angiogenic peptide released by endothelial cell Weibel-Palade bodies (WPBs), incr... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "334",
"doc_id": "11459139",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Insomnia can be effectively treated with cognitive behavioral therapy.
CANDIDATE_PASSAGE:
Influence of CYP2D6 Polymorphisms on Serum Levels of Tamoxifen Metabolites in Spanish Women with Breast Cancer BACKGROUND Estrogen receptor-positive breast cancer tumors depend on estrogen signaling for their growth and re... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "641",
"doc_id": "13069283",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Determine whether the abstract supports a yes/no/maybe answer. Return JSON label and rationale. | QUESTION: Are testosterone and estradiol affected in male and female patients with obstructive sleep apnea treated with continuous positive airway pressure?
ABSTRACT:
Continuous positive airway pressure (CPAP) improves symptoms in patients with obstructive sleep apnea syndrome (OSAS). It is currently unclear, whether ... | {"label": "no", "rationale": "The results are in line with previous smaller studies. However, our study is larger and longer than previously published studies. In addition, this is the first study analyzing the effects of CPAP on testosterone and estradiol and in both genders."} | {
"source_dataset": "PubMedQA",
"source_split": "pqa_artificial",
"task_name": "qa",
"pubid": 24464445,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: The composition of myosin-II isoform switches from the polarizable B isoform to the more homogenous A isoform during hematopoietic differentiation.
CANDIDATE_PASSAGE:
Olanzapine depot exposure in male rats: Dose-dependent lipogenic effects without concomitant weight gain. Treatment with second-generation antips... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1207",
"doc_id": "45153864",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Obesity is determined solely by environmental factors.
CANDIDATE_ABSTRACT:
TITLE: Familial obesity and leanness.
ABSTRACT: Using the Princeton School District Family Study cohort, our specific aim was to estimate the prevalence of suspected familial ponderosity and leanness, to provide empirical risk estimates ... | {"label": "REFUTES", "rationale": "Evidence snippet: \"Suspected familial obesity was observed in 2.4 percent and 6 percent respectively of random and hyperlipidemic recall group whites.\". The claim is refutes by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 873,
"doc_id": "19307912",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Helminths interfere with immune system control of coinfections by microbial pathogens 16.
CANDIDATE_PASSAGE:
Age-structured red blood cell susceptibility and the dynamics of malaria infections. Malaria parasites and immune responses in an infected human interact on a dynamic landscape, in which a population of ... | {"label": 1, "rationale": "The passage is loosely related but does not directly answer the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "506",
"doc_id": "26474812",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Pretreatment with the Arp2/3 inhibitor CK-666 affects lamelliopodia formation.
CANDIDATE_PASSAGE:
Ribosome biogenesis: Achilles heel of cancer? It is long been known that cancer and non-cancer cells can be distinguished on the basis of their nucleolar morphologies. As early as the 19th century, it was reported ... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "967",
"doc_id": "6670101",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Fz/PCP-dependent Pk localizes to the anterior membrane of notochord cells during zebrafish neuralation.
CANDIDATE_PASSAGE:
Response to self antigen imprints regulatory memory in tissues Immune homeostasis in tissues is achieved through a delicate balance between pathogenic T-cell responses directed at tissue-sp... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "440",
"doc_id": "4380287",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Upon developing tyrosine-kinase inhibitor resistance, new mutations in epidermal growth factor receptors emerge and cause treatment failure.
CANDIDATE_ABSTRACT:
TITLE: The polycomb group protein Suz12 is required for embryonic stem cell differentiation.
ABSTRACT: Polycomb group (PcG) proteins form multiprotein ... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 1346,
"doc_id": "1744097",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Lice attenuated SIV vaccines induce a stronger antigen-specific T cell response in lymph node cells.
CANDIDATE_ABSTRACT:
TITLE: Cost-effectiveness of 10-Year Risk Thresholds for Initiation of Statin Therapy for Primary Prevention of Cardiovascular Disease.
ABSTRACT: IMPORTANCE The American College of Cardiology... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 694,
"doc_id": "1287809",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: In S. cerevisiae, the absence of RNA surveillance pathways causes sensitivity to high iron conditions.
CANDIDATE_ABSTRACT:
TITLE: The journey of developing hematopoietic stem cells.
ABSTRACT: Hematopoietic stem cells (HSCs) develop during embryogenesis in a complex process that involves multiple anatomical site... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 565,
"doc_id": "92499",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Differentiated E2f-1, -2, -3 TKO cells in the intestine do not exhibit apoptosis.
CANDIDATE_PASSAGE:
E2F1-3 Switch from Activators in Progenitor Cells to Repressors in Differentiating Cells In the established model of mammalian cell cycle control, the retinoblastoma protein (Rb) functions to restrict cells from... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "345",
"doc_id": "4394817",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Repressing IL-18 has negative effects on atherosclerotic lesion composition and progression.
CANDIDATE_ABSTRACT:
TITLE: Expression of interleukin-18 in human atherosclerotic plaques and relation to plaque instability.
ABSTRACT: BACKGROUND Interleukin (IL)-18 is a potent proinflammatory cytokine with potential a... | {"label": "REFUTES", "rationale": "Evidence snippet: \"Interestingly, significantly higher levels of IL-18 mRNA were found in symptomatic (unstable) plaques than asymptomatic (stable) plaques (P<0.01).\". The claim is refutes by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 1042,
"doc_id": "17421851",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: UCB T cells reduce TCR diversity after transplantation.
CANDIDATE_PASSAGE:
Butyrate greatly enhances derivation of human induced pluripotent stem cells by promoting epigenetic remodeling and the expression of pluripotency-associated genes. We report here that butyrate, a naturally occurring fatty acid commonly ... | {"label": 1, "rationale": "The passage is loosely related but does not directly answer the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1336",
"doc_id": "8150638",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: ART substantially reduces infectiveness of HIV-positive people.
CANDIDATE_ABSTRACT:
TITLE: Elimination of HIV in South Africa through Expanded Access to Antiretroviral Therapy: A Model Comparison Study
ABSTRACT: BACKGROUND Expanded access to antiretroviral therapy (ART) using universal test and treat (UTT) has ... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 61,
"doc_id": "13901073",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Cognitive behavioral therapy is an ineffective treatment for insomnia
CANDIDATE_ABSTRACT:
TITLE: Cognitive behavioral therapy vs zopiclone for treatment of chronic primary insomnia in older adults: a randomized controlled trial.
ABSTRACT: CONTEXT Insomnia is a common condition in older adults and is associated ... | {"label": "REFUTES", "rationale": "Evidence snippet: \"Participants in the CBT group spent much more time in slow-wave sleep (stages 3 and 4) compared with those in other groups, and spent less time awake during the night.\". The claim is refutes by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 267,
"doc_id": "5912283",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: MICAL redox enzymes regulate actin dynamics.
CANDIDATE_PASSAGE:
Thioredoxin mediates oxidation-dependent phosphorylation of CRMP2 and growth cone collapse. Semaphorin3A (Sema3A) is a repulsive guidance molecule for axons, which acts by inducing growth cone collapse through phosphorylation of CRMP2 (collapsin re... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "738",
"doc_id": "33912020",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Articles published in open access format are less likely to be cited than traditional journals.
CANDIDATE_ABSTRACT:
TITLE: Open Access Increases Citation Rate
ABSTRACT: PLoS Biology publishes today a research article by Gunther Eysenbach that is not about biology. It is about citations. It provides robust evide... | {"label": "REFUTES", "rationale": "Evidence snippet: \"It provides robust evidence that open-access articles (OA articles) are more immediately recognized and cited than non-OA articles.\". The claim is refutes by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 129,
"doc_id": "27768226",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Primary cervical cancer screening with HPV detection has higher longitudinal sensitivity than conventional cytology to detect cervical intraepithelial neoplasia grade 2.
CANDIDATE_PASSAGE:
Evaluation of human papillomavirus testing in primary screening for cervical abnormalities: comparison of sensitivity, spec... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "971",
"doc_id": "19140422",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: ADAR1 binds to Dicer to cleave pre-miRNA.
CANDIDATE_ABSTRACT:
TITLE: ADAR1 Forms a Complex with Dicer to Promote MicroRNA Processing and RNA-Induced Gene Silencing
ABSTRACT: Adenosine deaminases acting on RNA (ADARs) are involved in RNA editing that converts adenosine residues to inosine specifically in double-... | {"label": "SUPPORTS", "rationale": "Evidence snippet: \"In this study, we investigated the interaction of the RNA editing mechanism with the RNA interference (RNAi) machinery and found that ADAR1 forms a complex with Dicer through direct protein-protein interaction.\". The claim is supports by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 49,
"doc_id": "5953485",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Energy balance requires hypothalamic glutamate neurotransmission.
CANDIDATE_PASSAGE:
Leptin regulates glutamate and glucose transporters in hypothalamic astrocytes. Glial cells perform critical functions that alter the metabolism and activity of neurons, and there is increasing interest in their role in appetit... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "378",
"doc_id": "17150648",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: ATF4 is a general endoplasmic reticulum stress marker.
CANDIDATE_PASSAGE:
Wolfram syndrome 1 and adenylyl cyclase 8 interact at the plasma membrane to regulate insulin production and secretion Endoplasmic reticulum (ER) stress causes pancreatic β-cell dysfunction and contributes to β-cell loss and the progressi... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "62",
"doc_id": "32587939",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Patients with microcytosis and higher erythrocyte count were more resistant to severe malarial anaemia when infected with Plasmodium falciparum.
CANDIDATE_ABSTRACT:
TITLE: Blood stem cells emerge from aortic endothelium by a novel type of cell transition
ABSTRACT: The ontogeny of haematopoietic stem cells (HSCs... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 929,
"doc_id": "243694",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Answer with yes, no, or maybe from the abstract, then provide a short rationale. Return JSON label and rationale. | QUESTION: Women with synchronous primary cancers of the endometrium and ovary: do they have Lynch syndrome?
ABSTRACT:
Lynch syndrome (hereditary nonpolyposis colorectal cancer; HNPCC) is an autosomal-dominant cancer predisposition syndrome that increases risk for multiple cancers, including colon, endometrial, and ova... | {"label": "maybe", "rationale": "Overall, 7% of women in our cohort met either clinical or molecular criteria for Lynch syndrome. All of these women had a prior history or a first-degree relative with an HNPCC-associated cancer. Limiting genetic evaluation to women with synchronous endometrial and ovarian cancer who ha... | {
"source_dataset": "PubMedQA",
"source_split": "pqa_labeled",
"task_name": "qa",
"pubid": 16361634,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Bacterial meningitis can be diagnosed on the basis of positive cerebrospinal fluid (CSF) cultures.
CANDIDATE_PASSAGE:
Foxp3(+) T cells regulate immunoglobulin a selection and facilitate diversification of bacterial species responsible for immune homeostasis. Foxp3(+) T cells play a critical role for the mainten... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "160",
"doc_id": "42693833",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Exposure to fine particulate air pollution is unrelated to anxiety prevalence.
CANDIDATE_ABSTRACT:
TITLE: The relation between past exposure to fine particulate air pollution and prevalent anxiety: observational cohort study
ABSTRACT: OBJECTIVE To determine whether higher past exposure to particulate air pollut... | {"label": "REFUTES", "rationale": "Evidence snippet: \"Significantly increased odds of high anxiety symptoms were observed with higher exposure to PM2.5 for multiple averaging periods (for example, odds ratio per 10 µg/m(3) increase in prior one month average PM2.5: 1.12, 95% confidence interval 1.06 to 1.19; in prior ... | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 400,
"doc_id": "791050",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Angiotensin converting enzyme inhibitors are associated with increased risk for functional renal insufficiency.
CANDIDATE_ABSTRACT:
TITLE: Renal considerations in angiotensin converting enzyme inhibitor therapy: a statement for healthcare professionals from the Council on the Kidney in Cardiovascular Disease an... | {"label": "SUPPORTS", "rationale": "Evidence snippet: \"Understanding the pathophysiological mechanisms and the common risk factors for ACE inhibitor–induced functional ARF is critical, because preventive strategies for ARF exist, and if effectively used, they may permit use of these compounds in a less restricted fash... | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 113,
"doc_id": "6157837",
"truncated": true,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Classify the claim against the candidate abstract. Return JSON with keys label and rationale. | CLAIM: Mice defective for deoxyribonucleic acid (DNA) polymerase m (polm) reveal increased sensitivity to ionizing radiation (IR).
CANDIDATE_ABSTRACT:
TITLE: Nonoverlapping functions of DNA polymerases mu, lambda, and terminal deoxynucleotidyltransferase during immunoglobulin V(D)J recombination in vivo.
ABSTRACT: DNA... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 777,
"doc_id": "32275758",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: The tissue surrounding the granuloma in an immune cell induces an anti-inflammatory immune response.
CANDIDATE_ABSTRACT:
TITLE: Intermittent prophylaxis with oral truvada protects macaques from rectal SHIV infection.
ABSTRACT: HIV continues to spread globally, mainly through sexual contact. Despite advances in ... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 1276,
"doc_id": "708425",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Determine whether the abstract supports a yes/no/maybe answer. Return JSON label and rationale. | QUESTION: Does nonselective matrix metalloproteinase but not tumor necrosis factor-α inhibition effectively preserve the early critical colon anastomotic integrity?
ABSTRACT:
Increased matrix metalloproteinase (MMP) activity has been implicated in the pathogenesis of colorectal anastomotic leakage. Tumor necrosis fact... | {"label": "yes", "rationale": "Pharmacological nonselective MMP inhibition ought to be explored as a prophylactic regimen to reduce anastomotic complications following colorectal resection. The involvement of TNF-α was insignificant in anastomotic wound healing in an experimental model."} | {
"source_dataset": "PubMedQA",
"source_split": "pqa_artificial",
"task_name": "qa",
"pubid": 21193914,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Anthrax spores can be disposed of easily after they are dispersed.
CANDIDATE_PASSAGE:
Secondary aerosolization of viable Bacillus anthracis spores in a contaminated US Senate Office. CONTEXT Bioterrorist attacks involving letters and mail-handling systems in Washington, DC, resulted in Bacillus anthracis (anthr... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "115",
"doc_id": "33872649",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Answer with yes, no, or maybe from the abstract, then provide a short rationale. Return JSON label and rationale. | QUESTION: Could different follow-up modalities play a role in the diagnosis of asymptomatic endometrial cancer relapses?
ABSTRACT:
To determine current practice and to assess the value of routine follow-up procedures for endometrial cancer surveillance. To discuss whether such procedures are feasible and effective to ... | {"label": "maybe", "rationale": "Follow-up after endometrial cancer treatment varies in Italy. In this retrospective study, women with asymptomatic recurrence have shown a better clinical outcome compared with those with symptomatic relapse. The optimal approach is actually unknown, and guidelines comparing follow-up p... | {
"source_dataset": "PubMedQA",
"source_split": "pqa_labeled",
"task_name": "qa",
"pubid": 22706226,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: Walking in traffic areas in London did not improve lung function in elderly adults.
CANDIDATE_PASSAGE:
Cognitive behavioral therapy vs zopiclone for treatment of chronic primary insomnia in older adults: a randomized controlled trial. CONTEXT Insomnia is a common condition in older adults and is associated with... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1372",
"doc_id": "5912283",
"truncated": true,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Determine whether the abstract supports a yes/no/maybe answer. Return JSON label and rationale. | QUESTION: Are anticardiolipin antibodies associated with restenosis or endothelial activation after percutaneous transluminal angioplasty?
ABSTRACT:
Restenosis following percutaneous transluminal angioplasty (PTA) continues to be a major clinical problem. Anticardiolipin antibodies (aCL) have been established as risk ... | {"label": "no", "rationale": "Our findings suggest that: a) patients with PAOD have a slightly higher prevalence of positive aCL compared to the general population, but no association is evident between positive aCL and restenosis within 6 months after PTA, b) no seroconversion from negative to positive aCL occurred wi... | {
"source_dataset": "PubMedQA",
"source_split": "pqa_artificial",
"task_name": "qa",
"pubid": 9257668,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: CHEK2 is not associated with breast cancer.
CANDIDATE_ABSTRACT:
TITLE: Improved variant discovery through local re-alignment of short-read next-generation sequencing data using SRMA
ABSTRACT: A primary component of next-generation sequencing analysis is to align short reads to a reference genome, with each read... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 208,
"doc_id": "1544804",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: The morphology change from large white adipocytes to small brown adipocytes is a sign of decreased energy expenditure potential in white adipose tissue.
CANDIDATE_PASSAGE:
Human ‘brite / beige’ adipocytes develop from capillary networks and their implantation improves metabolic homeostasis in mice Uncoupling pr... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1235",
"doc_id": "17973161",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:QA> | <TASK:QA> Answer with yes, no, or maybe from the abstract, then provide a short rationale. Return JSON label and rationale. | QUESTION: Do second lumbrical muscle recordings improve localization in severe carpal tunnel syndrome?
ABSTRACT:
To determine how often the second lumbrical motor potential is present when the abductor pollicis brevis (APB) motor potential is absent in severe carpal tunnel syndrome (CTS). Prospective study of consecut... | {"label": "yes", "rationale": "Second lumbrical recordings improve localization in many patients with severe CTS when routine median sensory and motor conduction studies produce no potentials."} | {
"source_dataset": "PubMedQA",
"source_split": "pqa_artificial",
"task_name": "qa",
"pubid": 17270527,
"truncated": false,
"label_space": [
"yes",
"no",
"maybe"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Venules have a thinner or absent smooth layer compared to arterioles.
CANDIDATE_PASSAGE:
Broad and potent neutralization of HIV-1 by a gp41-specific human antibody Characterization of human monoclonal antibodies is providing considerable insight into mechanisms of broad HIV-1 neutralization. Here we report an H... | {"label": 0, "rationale": "The passage is irrelevant to the query intent."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1363",
"doc_id": "4421578",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: Venules have less significant tunica adventitia than arterioles.
CANDIDATE_PASSAGE:
Scaffold-based three-dimensional human fibroblast culture provides a structural matrix that supports angiogenesis in infarcted heart tissue. BACKGROUND We have developed techniques to implant angiogenic patches onto the epicardi... | {"label": 3, "rationale": "The passage directly answers or verifies the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1364",
"doc_id": "8290953",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Human embryonic stem cells have the capacity to give rise to differentiated progeny representative of all three embryonic germ layers.
CANDIDATE_ABSTRACT:
TITLE: Establishment and in vitro differentiation of a new embryonic stem cell line from human blastocyst.
ABSTRACT: Embryonic stem cells have the ability to... | {"label": "SUPPORTS", "rationale": "Evidence snippet: \"Embryonic stem cells have the ability to remain undifferentiated and proliferate indefinitely in vitro while maintaining the potential to differentiate into derivatives of all three embryonic germ layers.\". The claim is supports by this abstract."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 531,
"doc_id": "36651210",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Score candidate passage relevance on 0-3 and return JSON with label and rationale. | QUERY: PPAR-RXRs are inhibited by PPAR ligands.
CANDIDATE_PASSAGE:
Notch activation promotes cell proliferation and the formation of neural stem cell-like colonies in human glioma cells Since Notch signaling plays a critical role in stem cells and oncogenesis, we hypothesized that Notch signaling might play roles in c... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "913",
"doc_id": "25050969",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
<TASK:VERIFY> | <TASK:VERIFY> Decide SUPPORTS, REFUTES, or NEI using only the candidate abstract. Return JSON label and rationale. | CLAIM: Angiotensin converting enzyme inhibitors are associated with decreased risk for functional renal insufficiency.
CANDIDATE_ABSTRACT:
TITLE: Variants at 6q21 implicate PRDM1 in the etiology of therapy-induced second malignancies after Hodgkin's lymphoma
ABSTRACT: Survivors of pediatric Hodgkin's lymphoma are at r... | {"label": "NEI", "rationale": "The abstract does not contain direct evidence to support or refute the claim."} | {
"source_dataset": "SciFact",
"task_name": "verification",
"claim_id": 112,
"doc_id": "1649738",
"truncated": false,
"label_space": [
"SUPPORTS",
"REFUTES",
"NEI"
],
"output_schema": {
"label": "string",
"rationale": "string"
}
} |
<TASK:RERANK> | <TASK:RERANK> Assign relevance class 0,1,2,3 for query-passage matching and return JSON label and rationale. | QUERY: The innate immune response struggles to remove small numbers of parasites.
CANDIDATE_PASSAGE:
Mice deficient in CD4 T cells have only transiently diminished levels of IFN-gamma, yet succumb to tuberculosis. CD4 T cells are important in the protective immune response against tuberculosis. Two mouse models defici... | {"label": 2, "rationale": "The passage provides closely relevant background for the query."} | {
"source_dataset": "mteb/scifact",
"task_name": "rerank",
"query_id": "1223",
"doc_id": "21878751",
"truncated": false,
"label_space": [
0,
1,
2,
3
],
"output_schema": {
"label": "integer",
"rationale": "string"
}
} |
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