manifest for ESM2_8M
Browse files- ESM2_8M/_manifest.json +38 -0
ESM2_8M/_manifest.json
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{
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"dataset": "Internal_Zhang2023_252502",
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"source_file": "Zhang2023_Int.xlsx",
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"n_peptides": 252502,
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"peptide_len": 28,
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"tokens_per_row": 30,
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"model": "facebook/esm2_t6_8M_UR50D",
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"subdir": "ESM2_8M",
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"n_layers": 6,
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"dim": 320,
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"layers": [
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"L0",
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"L1",
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"L2",
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"L3",
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"L4",
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"L5",
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"L6",
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"L6_pre"
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],
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"dtype": "float16",
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"compressed": false,
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"shard_rows": 252502,
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"masking": "none (raw forward)",
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"labels": [
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"control_psi",
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"mln4924_delta_psi",
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"svm_predicted_psi",
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"degron_index"
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],
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"labels_included": false,
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"token_layout": "axis1 length 30: index0=<cls>(BOS), index1..28=residue 1..28, index29=<eos>",
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"filters": [
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"drop C-terminal (sequence ends with '*')",
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"N-terminal tiles (tile_idx == 1) KEPT"
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],
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"tiling": "28-mer, step 23 (overlap 5)"
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}
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