{ "dataset": "Internal_Zhang2023_252502", "source_file": "Zhang2023_Int.xlsx", "n_peptides": 252502, "peptide_len": 28, "tokens_per_row": 30, "model": "facebook/esm2_t6_8M_UR50D", "subdir": "ESM2_8M", "n_layers": 6, "dim": 320, "layers": [ "L0", "L1", "L2", "L3", "L4", "L5", "L6", "L6_pre" ], "dtype": "float16", "compressed": false, "shard_rows": 252502, "masking": "none (raw forward)", "labels": [ "control_psi", "mln4924_delta_psi", "svm_predicted_psi", "degron_index" ], "labels_included": false, "token_layout": "axis1 length 30: index0=(BOS), index1..28=residue 1..28, index29=", "filters": [ "drop C-terminal (sequence ends with '*')", "N-terminal tiles (tile_idx == 1) KEPT" ], "tiling": "28-mer, step 23 (overlap 5)" }