{ "dataset": "Internal_Zhang2023_252502", "source_file": "Zhang2023_Int.xlsx", "n_peptides": 252502, "peptide_len": 28, "tokens_per_row": 30, "model": "facebook/esm2_t33_650M_UR50D", "subdir": "ESM2_650M", "n_layers": 33, "dim": 1280, "layers": [ "L0", "L1", "L2", "L3", "L4", "L5", "L6", "L7", "L8", "L9", "L10", "L11", "L12", "L13", "L14", "L15", "L16", "L17", "L18", "L19", "L20", "L21", "L22", "L23", "L24", "L25", "L26", "L27", "L28", "L29", "L30", "L31", "L32", "L33", "L33_pre" ], "dtype": "float16", "compressed": false, "shard_rows": 252502, "masking": "none (raw forward)", "labels": [ "control_psi", "mln4924_delta_psi", "svm_predicted_psi", "degron_index" ], "labels_included": false, "token_layout": "axis1 length 30: index0=(BOS), index1..28=residue 1..28, index29=", "filters": [ "drop C-terminal (sequence ends with '*')", "N-terminal tiles (tile_idx == 1) KEPT" ], "tiling": "28-mer, step 23 (overlap 5)" }