dataset stringclasses 1
value | source_file stringclasses 1
value | n_peptides int64 253k 253k | peptide_len int64 28 28 | tokens_per_row int64 30 30 | model stringclasses 2
values | subdir stringclasses 2
values | n_layers int64 6 33 | dim int64 320 1.28k | layers listlengths 8 35 | dtype stringclasses 1
value | compressed bool 1
class | shard_rows int64 253k 253k | masking stringclasses 1
value | labels listlengths 4 4 | labels_included bool 1
class | token_layout stringclasses 1
value | filters listlengths 2 2 | tiling stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Internal_Zhang2023_252502 | Zhang2023_Int.xlsx | 252,502 | 28 | 30 | facebook/esm2_t33_650M_UR50D | ESM2_650M | 33 | 1,280 | [
"L0",
"L1",
"L2",
"L3",
"L4",
"L5",
"L6",
"L7",
"L8",
"L9",
"L10",
"L11",
"L12",
"L13",
"L14",
"L15",
"L16",
"L17",
"L18",
"L19",
"L20",
"L21",
"L22",
"L23",
"L24",
"L25",
"L26",
"L27",
"L28",
"L29",
"L30",
"L31",
"L32",
"L33",
"L33_pre"
] | float16 | false | 252,502 | none (raw forward) | [
"control_psi",
"mln4924_delta_psi",
"svm_predicted_psi",
"degron_index"
] | false | axis1 length 30: index0=<cls>(BOS), index1..28=residue 1..28, index29=<eos> | [
"drop C-terminal (sequence ends with '*')",
"N-terminal tiles (tile_idx == 1) KEPT"
] | 28-mer, step 23 (overlap 5) |
Internal_Zhang2023_252502 | Zhang2023_Int.xlsx | 252,502 | 28 | 30 | facebook/esm2_t6_8M_UR50D | ESM2_8M | 6 | 320 | [
"L0",
"L1",
"L2",
"L3",
"L4",
"L5",
"L6",
"L6_pre"
] | float16 | false | 252,502 | none (raw forward) | [
"control_psi",
"mln4924_delta_psi",
"svm_predicted_psi",
"degron_index"
] | false | axis1 length 30: index0=<cls>(BOS), index1..28=residue 1..28, index29=<eos> | [
"drop C-terminal (sequence ends with '*')",
"N-terminal tiles (tile_idx == 1) KEPT"
] | 28-mer, step 23 (overlap 5) |
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