dataset
stringclasses
1 value
source_file
stringclasses
1 value
n_peptides
int64
253k
253k
peptide_len
int64
28
28
tokens_per_row
int64
30
30
model
stringclasses
2 values
subdir
stringclasses
2 values
n_layers
int64
6
33
dim
int64
320
1.28k
layers
listlengths
8
35
dtype
stringclasses
1 value
compressed
bool
1 class
shard_rows
int64
253k
253k
masking
stringclasses
1 value
labels
listlengths
4
4
labels_included
bool
1 class
token_layout
stringclasses
1 value
filters
listlengths
2
2
tiling
stringclasses
1 value
Internal_Zhang2023_252502
Zhang2023_Int.xlsx
252,502
28
30
facebook/esm2_t33_650M_UR50D
ESM2_650M
33
1,280
[ "L0", "L1", "L2", "L3", "L4", "L5", "L6", "L7", "L8", "L9", "L10", "L11", "L12", "L13", "L14", "L15", "L16", "L17", "L18", "L19", "L20", "L21", "L22", "L23", "L24", "L25", "L26", "L27", "L28", "L29", "L30", "L31", "L32", "L33", "L33_pre" ]
float16
false
252,502
none (raw forward)
[ "control_psi", "mln4924_delta_psi", "svm_predicted_psi", "degron_index" ]
false
axis1 length 30: index0=<cls>(BOS), index1..28=residue 1..28, index29=<eos>
[ "drop C-terminal (sequence ends with '*')", "N-terminal tiles (tile_idx == 1) KEPT" ]
28-mer, step 23 (overlap 5)
Internal_Zhang2023_252502
Zhang2023_Int.xlsx
252,502
28
30
facebook/esm2_t6_8M_UR50D
ESM2_8M
6
320
[ "L0", "L1", "L2", "L3", "L4", "L5", "L6", "L6_pre" ]
float16
false
252,502
none (raw forward)
[ "control_psi", "mln4924_delta_psi", "svm_predicted_psi", "degron_index" ]
false
axis1 length 30: index0=<cls>(BOS), index1..28=residue 1..28, index29=<eos>
[ "drop C-terminal (sequence ends with '*')", "N-terminal tiles (tile_idx == 1) KEPT" ]
28-mer, step 23 (overlap 5)