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README_CELL2.md
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---
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language: [en]
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license: cc-by-4.0
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task_categories: [text-generation,token-classification,question-answering]
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tags: [biology,kluyveromyces-marxianus,yeast,pathways,interactions,structures]
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size_categories: ["10K<n<100K"]
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---
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# 𧬠Kluyveromyces marxianus Cell 2 Dataset v10.0.0
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## Overview
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**CELL 2** expansion for *Kluyveromyces marxianus* - pathways, interactions, structures, repository.
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### Statistics
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| Metric | Value |
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|--------|-------|
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| **Total Collected** | 1,091 |
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| **Total Local Saved** | 1,091 |
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| **Version** | v10.0.0 |
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| **Date** | 2025-11-10 |
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### Data Categories
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- **KEGG Pathways**: 591 records (local: 591)
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- **UniProt Repository**: 500 records (local: 500)
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### Cell 0 Integration
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```
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km_dataset/
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βββ pathway/ # KEGG pathways
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βββ interaction/ # STRING interactions
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βββ structure/ # PDB structures
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βββ repository/ # UniProt entries
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βββ checkpoints/cell2_quantum/
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```
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### HuggingFace (Cell 2)
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- `cell2_pathways` - KEGG pathways
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- `cell2_interactions` - STRING interactions
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- `cell2_structures` - PDB structures
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- `cell2_repository` - UniProt entries
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- `cell2_splits` - Train/val/test splits
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## Usage
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### Load All Cell 2
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```python
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from datasets import load_dataset, concatenate_datasets
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all_data = []
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for phase in ['cell2_pathways', 'cell2_interactions', 'cell2_structures', 'cell2_repository']:
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try:
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ds = load_dataset("Milad96/Kluyveromyces-marxianus", split='train', data_dir=phase)
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all_data.append(ds)
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except:
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pass
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combined = concatenate_datasets(all_data)
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```
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### Load Specific
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```python
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pathways = load_dataset("Milad96/Kluyveromyces-marxianus", split='train', data_dir='cell2_pathways')
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interactions = load_dataset("Milad96/Kluyveromyces-marxianus", split='train', data_dir='cell2_interactions')
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```
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### Load Splits
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```python
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dataset = load_dataset("Milad96/Kluyveromyces-marxianus", data_dir='cell2_splits')
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train = dataset['train']
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val = dataset.get('validation')
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test = dataset.get('test')
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```
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## Citation
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```bibtex
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@dataset{km_cell2_v10_0_0,
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title={Kluyveromyces marxianus Cell 2 Dataset},
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version={v10.0.0},
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year={2025},
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url={https://huggingface.co/datasets/Milad96/Kluyveromyces-marxianus}
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}
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```
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**Status**: β
Production
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**Quality**: π Quantum Grade
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**Pipeline**: Async v10.0
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**Compatibility**: Cell 0 β | Cell 1 β | Cell 2 β
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