Database / manifests /17 /github.com__lugia-xiao__ndreamer_reproducible.json
opsecsystems's picture
Scripts of 2026-09-27: 2 new block(s), 375 manifest(s), 0 removed
f22351b verified
Raw History Blame Contribute Delete
7.27 kB
{
"format": "oscr-script-manifest/1",
"repository": "github.com/lugia-xiao/ndreamer_reproducible",
"url": "https://github.com/lugia-xiao/NDreamer_reproducible",
"host": "github.com",
"commit": "118684aa70fe23fcb60985c54121984a27ede9d2",
"license": "GPL-3.0",
"license_confirmed_by": "license file LICENSE",
"redistribution": "yes",
"files": [
{
"path": "LICENSE",
"sha256": "81cbae84a29ce7e770bf2bc7b178e50bda0ce8de6067aba661b0bc7b05b562f8",
"language": "License",
"lines": 674,
"truncated": false,
"block": 1,
"row": 2237
},
{
"path": "R_plot_codes/AD_ADNC_code/AD_neurons_GO.R",
"sha256": "ac73119c25574f400902373bc2fa7fb3b56368d19f3240b5ad6587e99541e508",
"language": "R",
"lines": 51,
"truncated": false,
"block": 1,
"row": 10192
},
{
"path": "R_plot_codes/AD_ADNC_code/AD_respiration_GO.R",
"sha256": "eb42f4f29dcd22cfcc985337faa48333ccc27242e2b66d90561984dd39d20cfe",
"language": "R",
"lines": 36,
"truncated": false,
"block": 1,
"row": 10008
},
{
"path": "R_plot_codes/AD_ADNC_code/GO_AD.R",
"sha256": "4fb84f86e64a173ca2d46994e66764392197bdd2dada21b63224b26469f44cb0",
"language": "R",
"lines": 48,
"truncated": false,
"block": 1,
"row": 10037
},
{
"path": "R_plot_codes/AD_ADNC_code/common_genes.R",
"sha256": "d41935d34085629004b661c890b88ad0e0ca6c06a4de5a7c8757b2ccb6b3f903",
"language": "R",
"lines": 20,
"truncated": false,
"block": 1,
"row": 9974
},
{
"path": "R_plot_codes/case_control_code/radar.R",
"sha256": "f64a37c217af9d97e357763171d12dd2a67886ff34c32de1a039d44df0168e24",
"language": "R",
"lines": 139,
"truncated": false,
"block": 1,
"row": 10270
},
{
"path": "R_plot_codes/case_control_code/radar_mouse.R",
"sha256": "3869f6493d80de956b9c6de13b714064b79ae4c4b9d6e4aa506db7156b45c62f",
"language": "R",
"lines": 127,
"truncated": false,
"block": 1,
"row": 10231
},
{
"path": "R_plot_codes/case_control_code/simple_GO.R",
"sha256": "5e2b26b566b13fee1dcff1330d9c5067836900d1bf99bc94d715b4b567e67f4c",
"language": "R",
"lines": 52,
"truncated": false,
"block": 1,
"row": 10413
},
{
"path": "R_plot_codes/case_control_code/simple_GO_mouse.R",
"sha256": "c63c05ff1715cc4d6a0b8c692e2c3ec6b7354427b4faeed2314a810db45850f5",
"language": "R",
"lines": 46,
"truncated": false,
"block": 1,
"row": 10360
},
{
"path": "R_plot_codes/experimental_benchmark_plot_codes/ablation.R",
"sha256": "61534d86217609401b215731a0377df3d9bcf47c336520c0348f67516ff162fd",
"language": "R",
"lines": 43,
"truncated": false,
"block": 1,
"row": 10046
},
{
"path": "R_plot_codes/experimental_benchmark_plot_codes/overall_plot_experimental.R",
"sha256": "41fc8fcc2a5ab20cf5e0c377dc30fbae8c20e1d60e37d7869b3716bf1d7ff12d",
"language": "R",
"lines": 92,
"truncated": false,
"block": 1,
"row": 10174
},
{
"path": "R_plot_codes/experimental_benchmark_plot_codes/plot_experimental.R",
"sha256": "82b38bf695e1ee477f24b749272c03e88d99d0fec31499e83baaee6f01630ebe",
"language": "R",
"lines": 93,
"truncated": false,
"block": 1,
"row": 10190
},
{
"path": "R_plot_codes/experimental_benchmark_plot_codes/plot_experimental_have_batch.R",
"sha256": "995d14e7f24fa510b4fadc773110e6b81eec9c066246a5810319bad468b8243d",
"language": "R",
"lines": 104,
"truncated": false,
"block": 1,
"row": 10227
},
{
"path": "R_plot_codes/experimental_benchmark_plot_codes/plot_experimental_have_batch_ndreamer.R",
"sha256": "43e8b43b75d310863851b5a6edf07b8a10f2375b2328f730044353520e99feee",
"language": "R",
"lines": 104,
"truncated": false,
"block": 1,
"row": 10226
},
{
"path": "benchmark/cellanova.ipynb",
"sha256": "2beffdc4b44d0e04739f8db7752d334c3b29825ba0d72dadb9d7cf7f348af7c1",
"language": "Jupyter",
"lines": 160,
"truncated": false,
"block": 1,
"row": 1821
},
{
"path": "benchmark/cellanova.nbconvert.ipynb",
"sha256": "2beffdc4b44d0e04739f8db7752d334c3b29825ba0d72dadb9d7cf7f348af7c1",
"language": "Jupyter",
"lines": 160,
"truncated": false,
"block": 1,
"row": 1821
},
{
"path": "benchmark/cinema_ot.ipynb",
"sha256": "86d23886a20adb21931f669333cf6928b817201edac19a56a21d91b504abcdd8",
"language": "Jupyter",
"lines": 140,
"truncated": false,
"block": 1,
"row": 1793
},
{
"path": "benchmark/cinema_ot.nbconvert.ipynb",
"sha256": "86d23886a20adb21931f669333cf6928b817201edac19a56a21d91b504abcdd8",
"language": "Jupyter",
"lines": 140,
"truncated": false,
"block": 1,
"row": 1793
},
{
"path": "benchmark/cinema_ot_ITE.ipynb",
"sha256": "2c8552d1793a5984f45bca2e89f822b1eddcdb572e3a9b1a66d51ffea7171ff4",
"language": "Jupyter",
"lines": 113,
"truncated": false,
"block": 1,
"row": 1733
},
{
"path": "benchmark/cinema_ot_ITE.nbconvert.ipynb",
"sha256": "2c8552d1793a5984f45bca2e89f822b1eddcdb572e3a9b1a66d51ffea7171ff4",
"language": "Jupyter",
"lines": 113,
"truncated": false,
"block": 1,
"row": 1733
},
{
"path": "benchmark/evaluate_batch.ipynb",
"sha256": "35e7f513279691fa13710a7bdded77ac6eec6b34437969f827aa6980c07b9d12",
"language": "Jupyter",
"lines": 147,
"truncated": false,
"block": 1,
"row": 1803
},
{
"path": "benchmark/evaluate_batch.nbconvert.ipynb",
"sha256": "35e7f513279691fa13710a7bdded77ac6eec6b34437969f827aa6980c07b9d12",
"language": "Jupyter",
"lines": 147,
"truncated": false,
"block": 1,
"row": 1803
},
{
"path": "benchmark/evaluate_cellanova.ipynb",
"sha256": "caa1dc718a6969e4d1e87bd5136ed2f7427d7f5d04f0e0b1c398e9bf825ff68d",
"language": "Jupyter",
"lines": 268,
"truncated": false,
"block": 1,
"row": 1926
},
{
"path": "benchmark/evaluate_scd.ipynb",
"sha256": "0f9af9eaa920bfd658163e02d62ca46aa7e8a8b2663a8cb6bae92641b35c8038",
"language": "Jupyter",
"lines": 291,
"truncated": false,
"block": 1,
"row": 1940
},
{
"path": "benchmark/get_cellanova_mse.ipynb",
"sha256": "d827f3333a087004f2a911fb4bb4099797d1b0b4a2277124d37629703771fb4d",
"language": "Jupyter",
"lines": 144,
"truncated": false,
"block": 1,
"row": 1800
},
{
"path": "benchmark/metrics.py",
"sha256": "e3ba29bcec7438a86ec273b3c7764961e930fb96e28379255f48c600833cdf41",
"language": "Python",
"lines": 275,
"truncated": false,
"block": 1,
"row": 8441
},
{
"path": "benchmark/mixscape.ipynb",
"sha256": "bccb9a50cdef699f51e0b92dd2a055f428b3440d68602089bec979d68448c04a",
"language": "Jupyter",
"lines": 172,
"truncated": false,
"block": 1,
"row": 1827
},
{
"path": "benchmark/mixscape.nbconvert.ipynb",
"sha256": "bccb9a50cdef699f51e0b92dd2a055f428b3440d68602089bec979d68448c04a",
"language": "Jupyter",
"lines": 172,
"truncated": false,
"block": 1,
"row": 1827
},
{
"path": "benchmark/plot_cellanova.ipynb",
"sha256": "8af35f7fe592167a2c0b30eda936d8c9874176272da54ab4fd647d87fb2a2a0f",
"language": "Jupyter",
"lines": 104,
"truncated": false,
"block": 1,
"row": 1763
}
]
}