Database / manifests /18 /zenodo__20353475.json
opsecsystems's picture
Scripts of 2026-09-29: 4 new block(s), 1817 manifest(s), 0 removed
c64ac01 verified
Raw History Blame Contribute Delete
3.73 kB
{
"format": "oscr-script-manifest/1",
"repository": "zenodo:20353475",
"url": "https://doi.org/10.5281/zenodo.20353475",
"host": "zenodo.org",
"commit": "",
"license": "CC-BY-4.0",
"license_confirmed_by": "license of the archive's record",
"redistribution": "yes",
"files": [
{
"path": "Run_Numbat.sh",
"sha256": "6d243ec094e54d6a11d21bcf346be529597c89275c7f8e0c32d98c88eea7bb8f",
"language": "Shell",
"lines": 29,
"truncated": false,
"block": 8,
"row": 7381
},
{
"path": "Run_SComatic.sh",
"sha256": "9eb498dfa90c5b0a0256645e152c46610ed0494794dcb7f225ac1332b4095e46",
"language": "Shell",
"lines": 32,
"truncated": false,
"block": 8,
"row": 7535
},
{
"path": "Run_compass.sh",
"sha256": "2a60b807942edd0a52464e1ff2e166439bb304680eb24569d90601debca44b5c",
"language": "Shell",
"lines": 21,
"truncated": false,
"block": 8,
"row": 6741
},
{
"path": "Step.01.Data Preparing.R",
"sha256": "b20814276f6bb3273a059965d983fbdce318b0a63e33599cef1ceefd88764393",
"language": "R",
"lines": 37,
"truncated": false,
"block": 8,
"row": 1726
},
{
"path": "Step.02.QC_and_Integrated.R",
"sha256": "e176f43215b090b93f87ea8cc1d79ec8076b605737f2a52a20f4136c13672672",
"language": "R",
"lines": 28,
"truncated": false,
"block": 8,
"row": 1563
},
{
"path": "Step.03.vis_for_umap_and_distribution_related_figure1_2.R",
"sha256": "fd49c6f7a1e4f3fa75f0e889a606662c1062b21f9d035ce7383ee73600cec0fd",
"language": "R",
"lines": 220,
"truncated": false,
"block": 8,
"row": 3898
},
{
"path": "Step.04.Cancer_Cells_subtype_analysis_related_figure2.R.R",
"sha256": "4f4d3325791068de6c185d718e238f80129b8bfb756b8989a0b717a976f67f19",
"language": "R",
"lines": 89,
"truncated": false,
"block": 8,
"row": 2514
},
{
"path": "Step.05.Cancer_Cell_Functional_analysis_related_figure3.R",
"sha256": "f824dcecbbc7fe73543fa331d5df2a9ae6ee09fd36cc7b8caa14dce887fb7b92",
"language": "R",
"lines": 682,
"truncated": false,
"block": 8,
"row": 4872
},
{
"path": "Step.06.Spatial_analysis_in_cancer_cells_related_figure4-5.R",
"sha256": "0c543ad8a321022cd2bbc3dad8ec10ea6ca343dd88eec6982e7d7523c1b9b640",
"language": "R",
"lines": 315,
"truncated": false,
"block": 8,
"row": 4385
},
{
"path": "Step.07.Spatial_analysis_for_TIME_related_figure5-6.R",
"sha256": "04b02c97243850abed82752e8a43b77ad9d2e554ca40f343d8dfa020529cd093",
"language": "R",
"lines": 264,
"truncated": false,
"block": 8,
"row": 3947
},
{
"path": "Step.08.Spatial_analysis_for_XENIUM_related_Figure6.R",
"sha256": "7325960c4d8f4195240be84da86bc2af4e3237444b85231644e3d8cf20e39afc",
"language": "R",
"lines": 301,
"truncated": false,
"block": 8,
"row": 4175
},
{
"path": "Xenium_Spatial_Transcriptomic_Analysis.py",
"sha256": "319accbfbce2b3ee74c7984d88aa77cc64b767eb341907b8258089c7346fb773",
"language": "Python",
"lines": 849,
"truncated": false,
"block": 7,
"row": 10110
},
{
"path": "myCellChat.R",
"sha256": "d5f58ea071b59e1cafc5f2be46df419fcfff4382ff4e1d18ae00be55fd9c9526",
"language": "R",
"lines": 86,
"truncated": false,
"block": 8,
"row": 2237
},
{
"path": "myMonocle.R",
"sha256": "f64364705f24d36d8ce624e567468d03c91b3cc3c20f15c787f61dc8c1702667",
"language": "R",
"lines": 32,
"truncated": false,
"block": 8,
"row": 1772
},
{
"path": "myRCTD.R",
"sha256": "084f8313af006abc8a9ce11d5f777f60dde6bb7604349fa500b693d1cb584225",
"language": "R",
"lines": 106,
"truncated": false,
"block": 8,
"row": 2645
}
]
}