Scripts of 2026-10-07: 1 new block(s), 326 manifest(s), 0 removed
Browse filesThis view is limited to 50 files because it contains too many changes. See raw diff
- README.md +19 -19
- blocks/00019.parquet +3 -0
- manifests/00/github.com__kellywhiteford__musicianship.json +606 -0
- manifests/01/github.com__grivlis__utcs3_rgm.json +0 -0
- manifests/01/github.com__moothalab__ercc1-mouse-rob.json +102 -0
- manifests/04/github.com__meldayeghaian__mmtsimtanet.json +201 -0
- manifests/04/github.com__mmunibas__halobenzenes.json +30 -0
- manifests/05/github.com__franculino__vgm.json +462 -0
- manifests/06/zenodo__1304771.json +93 -0
- manifests/0a/zenodo__7598955.json +30 -0
- manifests/0a/zenodo__7612119.json +1650 -0
- manifests/0b/github.com__cfy2yue__tcm-navigator.json +30 -0
- manifests/10/figshare__26336812.json +426 -0
- manifests/10/zenodo__15192327.json +129 -0
- manifests/12/github.com__hugocwb__chowwingbometal_2025_elife.json +66 -0
- manifests/12/github.com__nellaker-group__placenta.json +237 -0
- manifests/12/zenodo__14499167.json +273 -0
- manifests/13/zenodo__15801774.json +66 -0
- manifests/13/zenodo__16880929.json +48 -0
- manifests/14/zenodo__15718273.json +93 -0
- manifests/16/github.com__ccicb__conshla.json +48 -0
- manifests/16/github.com__susuneu__genderbias_adhd.json +48 -0
- manifests/16/zenodo__16734066.json +174 -0
- manifests/18/github.com__denisbrunet__cartool.json +0 -0
- manifests/19/github.com__kellywhiteford__musicianshipeeg.json +651 -0
- manifests/1a/gitlab.com__tommyclausner__meglyon-experiment-runner.json +183 -0
- manifests/1a/zenodo__15478572.json +84 -0
- manifests/1b/github.com__lizhang30__gpcndta.json +264 -0
- manifests/1b/github.com__soffiafdz__hvr_validation.json +570 -0
- manifests/1c/github.com__ednahuang__subnetwork-clustering-lme-modeling.json +1461 -0
- manifests/1c/zenodo__15526615.json +21 -0
- manifests/1d/github.com__hpwei82__2022_hpwei.json +183 -0
- manifests/1d/github.com__sankaranlab__scavenge.json +174 -0
- manifests/1d/github.com__zhangzehao626__pansci.json +57 -0
- manifests/1f/github.com__memcolab__kang2025communbiol.json +39 -0
- manifests/1f/zenodo__14166452.json +21 -0
- manifests/21/github.com__jbonaiuto__cued_action_selection.json +165 -0
- manifests/21/zenodo__15005128.json +39 -0
- manifests/23/github.com__farrowlab__reinhard_2019.json +660 -0
- manifests/24/github.com__yliu38__egnf.json +183 -0
- manifests/24/zenodo__14219743.json +21 -0
- manifests/24/zenodo__16218569.json +174 -0
- manifests/24/zenodo__16266612.json +282 -0
- manifests/25/github.com__julianreiser__grail_switch.json +219 -0
- manifests/26/github.com__hilab-git__word.json +48 -0
- manifests/26/github.com__kmnp__vpt.json +615 -0
- manifests/27/zenodo__16218570.json +174 -0
- manifests/28/github.com__danclab__laminar_motor_erf.json +183 -0
- manifests/28/github.com__tinayiluo0322__ad-dfc-signatures.json +93 -0
- manifests/28/zenodo__14860402.json +21 -0
README.md
CHANGED
|
@@ -19,8 +19,8 @@ The code published by the authors of open-access neuroscience papers, as found a
|
|
| 19 |
verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified
|
| 20 |
commit, **under the license of its repository**.
|
| 21 |
|
| 22 |
-
- **
|
| 23 |
-
in
|
| 24 |
- **Only files whose repository's license allows redistribution**, confirmed by the
|
| 25 |
repository's own license file (or, for an archive without one, by its record). Files
|
| 26 |
without such a license are never copied here: Open Scientific Code Registry (OSCR) links to them at the source.
|
|
@@ -43,26 +43,26 @@ Each file keeps the license of its repository, given in the repository's manifes
|
|
| 43 |
|
| 44 |
| license | repositories |
|
| 45 |
|---|---|
|
| 46 |
-
| MIT |
|
| 47 |
-
| CC-BY-4.0 |
|
| 48 |
-
| GPL-3.0 |
|
| 49 |
-
| Apache-2.0 |
|
| 50 |
-
| BSD-3-Clause |
|
| 51 |
-
| CC0-1.0 |
|
| 52 |
-
| GPL-2.0 |
|
| 53 |
-
| BSD-2-Clause |
|
| 54 |
-
| AGPL-3.0 |
|
| 55 |
-
| CC-BY-NC-4.0 |
|
| 56 |
-
| other-open |
|
| 57 |
-
| CC-BY-NC-SA-4.0 |
|
| 58 |
-
|
|
| 59 |
-
|
|
|
|
|
| 60 |
| MPL-2.0 | 15 |
|
| 61 |
| LGPL-2.1 | 15 |
|
| 62 |
-
|
|
| 63 |
-
|
|
| 64 |
| CECILL-2.1 | 5 |
|
| 65 |
-
| Unlicense | 4 |
|
| 66 |
| EUPL-1.2 | 4 |
|
| 67 |
| CC-BY-ND-4.0 | 3 |
|
| 68 |
|
|
|
|
| 19 |
verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified
|
| 20 |
commit, **under the license of its repository**.
|
| 21 |
|
| 22 |
+
- **346,303 unique files** (3,120 MB of text) from **7,426 repositories**,
|
| 23 |
+
in 19 Parquet block(s).
|
| 24 |
- **Only files whose repository's license allows redistribution**, confirmed by the
|
| 25 |
repository's own license file (or, for an archive without one, by its record). Files
|
| 26 |
without such a license are never copied here: Open Scientific Code Registry (OSCR) links to them at the source.
|
|
|
|
| 43 |
|
| 44 |
| license | repositories |
|
| 45 |
|---|---|
|
| 46 |
+
| MIT | 3037 |
|
| 47 |
+
| CC-BY-4.0 | 1696 |
|
| 48 |
+
| GPL-3.0 | 1116 |
|
| 49 |
+
| Apache-2.0 | 566 |
|
| 50 |
+
| BSD-3-Clause | 340 |
|
| 51 |
+
| CC0-1.0 | 123 |
|
| 52 |
+
| GPL-2.0 | 100 |
|
| 53 |
+
| BSD-2-Clause | 87 |
|
| 54 |
+
| AGPL-3.0 | 77 |
|
| 55 |
+
| CC-BY-NC-4.0 | 60 |
|
| 56 |
+
| other-open | 48 |
|
| 57 |
+
| CC-BY-NC-SA-4.0 | 48 |
|
| 58 |
+
| CC-BY-NC-ND-4.0 | 28 |
|
| 59 |
+
| LGPL-3.0 | 26 |
|
| 60 |
+
| CC-BY-SA-4.0 | 17 |
|
| 61 |
| MPL-2.0 | 15 |
|
| 62 |
| LGPL-2.1 | 15 |
|
| 63 |
+
| Artistic-2.0 | 10 |
|
| 64 |
+
| Unlicense | 5 |
|
| 65 |
| CECILL-2.1 | 5 |
|
|
|
|
| 66 |
| EUPL-1.2 | 4 |
|
| 67 |
| CC-BY-ND-4.0 | 3 |
|
| 68 |
|
blocks/00019.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:7229a7cf54c7d0f4c0457cbcbd1e18c56c362cbb90a773c1f0548add9c40a87c
|
| 3 |
+
size 26168652
|
manifests/00/github.com__kellywhiteford__musicianship.json
ADDED
|
@@ -0,0 +1,606 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/kellywhiteford/musicianship",
|
| 4 |
+
"url": "https://github.com/kellywhiteford/Musicianship",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "f6bb813d2200625263c10a1df5aae1775b4ba1cb",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "1)F0DLs/F0DLs_cfg.m",
|
| 13 |
+
"sha256": "69dc6dfda07d7b5e90debc27e78b89acbac01180f0c1126bea495daeec0a33cd",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 41,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 6228
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "1)F0DLs/F0DLs_msg.m",
|
| 22 |
+
"sha256": "37ec1d4b7e1594c75d664240bdaead8951d170dffd3f2a961c4e94305f1ff906",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 39,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 5498
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "1)F0DLs/F0DLs_set.m",
|
| 31 |
+
"sha256": "a27fd42f77f0ddb2c6b825d4013ddc47e2a39fb8f83f17476b2bacaf25bcfdbd",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 16,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 4715
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "1)F0DLs/F0DLs_user.m",
|
| 40 |
+
"sha256": "a9b2f8592b1be3160c0b60bc01aceb941121387d2bd2d1171e845d7c490e1730",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 102,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 6392
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "1)F0DLs/generate_ct.m",
|
| 49 |
+
"sha256": "25ef813f40c962fa6468d15b1d2c35aba1caceeeee1d848583dbd777d9c81d82",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 48,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 5481
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "1)F0DLs/psd_da.m",
|
| 58 |
+
"sha256": "2c05597bc4a86ccbe557c9fc0ba3bc080b6b9dff0745c984878fffdd5a04b420",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 34,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 4953
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "1)F0DLs/specEnvLPC.m",
|
| 67 |
+
"sha256": "b60a02b3fe3be2b613d26378aac24009279f1871e76a8d1d89f269432b645ef3",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 45,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 5485
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "1)F0DLs/spec_klw.m",
|
| 76 |
+
"sha256": "2864ef7ae436b86461322438769fc85257f139004b926741fb1fb1cf0d8d6ef6",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 49,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 5243
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "11)EEG_da/EEG_da.m",
|
| 85 |
+
"sha256": "37a7d2df719edbd7c8323a2d965c60f951a2a54c2e5c85eecbde74ab2172ee0d",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 105,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 6617
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "11)EEG_da/resample_babble.m",
|
| 94 |
+
"sha256": "25aaa4026e72c6bbfb210446718eb7605ab76154c2f8de14e99062b3fef3c73d",
|
| 95 |
+
"language": "MATLAB",
|
| 96 |
+
"lines": 54,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 5426
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "12)EEG_mi3/EEG_mi3.m",
|
| 103 |
+
"sha256": "2a43475bf6032a0eec5674e1e10151d28bcd6d20a52204bc463fcd3206cc628e",
|
| 104 |
+
"language": "MATLAB",
|
| 105 |
+
"lines": 100,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 6501
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "12)EEG_mi3/resample_mi3.m",
|
| 112 |
+
"sha256": "0e8fbbae362a9fb82ec6d79a47da6fb4d077ed4ffcee8ee9f2146d41c1719a34",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 56,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 5338
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "2)AbsProbe/AbsProbe_cfg.m",
|
| 121 |
+
"sha256": "ceafa40c86fbd560f885b883ca33110d986f1f7c820bfd3e7edbf53c5cbc2926",
|
| 122 |
+
"language": "MATLAB",
|
| 123 |
+
"lines": 40,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 6420
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "2)AbsProbe/AbsProbe_msg.m",
|
| 130 |
+
"sha256": "746ac7d3e9cd753a236d77db59271e1bfa16e2b4fd0ceb15aacb32570bd88947",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 39,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 5461
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "2)AbsProbe/AbsProbe_set.m",
|
| 139 |
+
"sha256": "ca48b28089ef7fc4967d9e5e3fbd28d3110f83389d896dd5bc321c1e26dd1fe3",
|
| 140 |
+
"language": "MATLAB",
|
| 141 |
+
"lines": 20,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 4777
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "2)AbsProbe/AbsProbe_user.m",
|
| 148 |
+
"sha256": "5ba4451fe04d9022b27f98706b2eac10fa9d151b777770e8c96583411c83b48c",
|
| 149 |
+
"language": "MATLAB",
|
| 150 |
+
"lines": 50,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 5630
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "3)FrequencyTuning/FrequencyTuning.m",
|
| 157 |
+
"sha256": "32efe269cd61a3cf5d73eaa12a0070d248d797441fd5b09b813c4f868a9ff0c2",
|
| 158 |
+
"language": "MATLAB",
|
| 159 |
+
"lines": 535,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 8155
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "3)FrequencyTuning/PsychtoolboxPostInstallRoutine.m",
|
| 166 |
+
"sha256": "029d6c3d7023c3495b988c1558c30bc8854e5df4abb89cd4393cc86a7a2dd3f3",
|
| 167 |
+
"language": "MATLAB",
|
| 168 |
+
"lines": 721,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 8293
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "3)FrequencyTuning/makeNoiseSweep.m",
|
| 175 |
+
"sha256": "9f1805813c3e0ba29844bcb06869a2159bfc11d3ca0524a4f72f3aed359bfc31",
|
| 176 |
+
"language": "MATLAB",
|
| 177 |
+
"lines": 100,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 6488
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "4)Abs/Abs_cfg.m",
|
| 184 |
+
"sha256": "a864d20fc2a57ece7872eee37d28021cc4e2852ae2305c011e95187410c684b2",
|
| 185 |
+
"language": "MATLAB",
|
| 186 |
+
"lines": 40,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 6207
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "4)Abs/Abs_msg.m",
|
| 193 |
+
"sha256": "dd32c8796b38bc8164e22ae63dec3a055a0e5f81666de306f86e922fb20e110f",
|
| 194 |
+
"language": "MATLAB",
|
| 195 |
+
"lines": 39,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 5475
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "4)Abs/Abs_set.m",
|
| 202 |
+
"sha256": "6f9c7f9d1ecc7a3c22af41d98c03fdf35457a57904aefa9e3f2034b1757684c8",
|
| 203 |
+
"language": "MATLAB",
|
| 204 |
+
"lines": 17,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 4714
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "4)Abs/Abs_user.m",
|
| 211 |
+
"sha256": "ecd0c0f17359d6da96ca5d7debd5f956576eafc756eabbb15a642ba7983bcb06",
|
| 212 |
+
"language": "MATLAB",
|
| 213 |
+
"lines": 63,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 5869
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "5)NonSpeechInfo/MBSMBD_cfg.m",
|
| 220 |
+
"sha256": "33a98b9b1cd73ef7759e868846f7371fddf4011cfb1a863c119cf0e705773918",
|
| 221 |
+
"language": "MATLAB",
|
| 222 |
+
"lines": 42,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 6449
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "5)NonSpeechInfo/MBSMBD_msg.m",
|
| 229 |
+
"sha256": "4a9562f5bbd399b4ca499152bdfceb9d41d31b5d6c097f86f92297aa37a7aa8d",
|
| 230 |
+
"language": "MATLAB",
|
| 231 |
+
"lines": 39,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 5430
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "5)NonSpeechInfo/MBSMBD_set.m",
|
| 238 |
+
"sha256": "969945284bcc135979bf0b8be5d45900a61c9e7279e6c4454561819bcf3beb49",
|
| 239 |
+
"language": "MATLAB",
|
| 240 |
+
"lines": 31,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 5240
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "5)NonSpeechInfo/MBSMBD_user.m",
|
| 247 |
+
"sha256": "361668baaaca0be4428c807834623b1d8333883f03b15de313a82dfd927a5cb9",
|
| 248 |
+
"language": "MATLAB",
|
| 249 |
+
"lines": 150,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 7190
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "6)QuickSIN/1)Practice/NewSubject_QuickSIN_Practice.m",
|
| 256 |
+
"sha256": "b42677f33c73e42d8fe106f44e5b476f113f7e50d806209a77f54a219a717f94",
|
| 257 |
+
"language": "MATLAB",
|
| 258 |
+
"lines": 33,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 5316
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "6)QuickSIN/1)Practice/QuickSIN_Practice_parameters.m",
|
| 265 |
+
"sha256": "4e18396e03b69da688a82847e4609a61866b0914bd8d7746284499b0710bb764",
|
| 266 |
+
"language": "MATLAB",
|
| 267 |
+
"lines": 22,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 5320
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "6)QuickSIN/1)Practice/SpeechTest.m",
|
| 274 |
+
"sha256": "163dcb1b9bffca5445a55f15f4b4f976b5f167bc3b91c16d3c1b0ce2410a1cc1",
|
| 275 |
+
"language": "MATLAB",
|
| 276 |
+
"lines": 255,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 19,
|
| 279 |
+
"row": 7839
|
| 280 |
+
},
|
| 281 |
+
{
|
| 282 |
+
"path": "6)QuickSIN/2)Check Practice/checkPractice.m",
|
| 283 |
+
"sha256": "76f6629c7b822d41949d8344ff9b3780f0c43ec59fd28aba3dd617c2810213e6",
|
| 284 |
+
"language": "MATLAB",
|
| 285 |
+
"lines": 12,
|
| 286 |
+
"truncated": false,
|
| 287 |
+
"block": 19,
|
| 288 |
+
"row": 4632
|
| 289 |
+
},
|
| 290 |
+
{
|
| 291 |
+
"path": "6)QuickSIN/3)Run Task/NewSubject_QuickSIN.m",
|
| 292 |
+
"sha256": "b6dbdfb1d4899f6c9c0b9d8d5fa8ffd3c5cd771e99f869cd2532715bcd24c057",
|
| 293 |
+
"language": "MATLAB",
|
| 294 |
+
"lines": 32,
|
| 295 |
+
"truncated": false,
|
| 296 |
+
"block": 19,
|
| 297 |
+
"row": 5401
|
| 298 |
+
},
|
| 299 |
+
{
|
| 300 |
+
"path": "6)QuickSIN/3)Run Task/QuickSIN_parameters.m",
|
| 301 |
+
"sha256": "498958eafd378489128ac67eca5b5b5240ca0e44ea6d31ce9bc9cb24ac37baad",
|
| 302 |
+
"language": "MATLAB",
|
| 303 |
+
"lines": 22,
|
| 304 |
+
"truncated": false,
|
| 305 |
+
"block": 19,
|
| 306 |
+
"row": 5296
|
| 307 |
+
},
|
| 308 |
+
{
|
| 309 |
+
"path": "6)QuickSIN/3)Run Task/SpeechTest.m",
|
| 310 |
+
"sha256": "94bdc050a252684707975fe17d5a410cbc7093c44775e899ad16c0317d5bf88b",
|
| 311 |
+
"language": "MATLAB",
|
| 312 |
+
"lines": 256,
|
| 313 |
+
"truncated": false,
|
| 314 |
+
"block": 19,
|
| 315 |
+
"row": 7830
|
| 316 |
+
},
|
| 317 |
+
{
|
| 318 |
+
"path": "7)HINT/1)Practice/HINT_Practice_parameters.m",
|
| 319 |
+
"sha256": "f0919be462c12fb7b31d0d8b39ec2bb6b73aa241492b1974f40a50540f5b996f",
|
| 320 |
+
"language": "MATLAB",
|
| 321 |
+
"lines": 25,
|
| 322 |
+
"truncated": false,
|
| 323 |
+
"block": 19,
|
| 324 |
+
"row": 5342
|
| 325 |
+
},
|
| 326 |
+
{
|
| 327 |
+
"path": "7)HINT/1)Practice/NewSubject_HINT_Practice.m",
|
| 328 |
+
"sha256": "bad436242f21f29bed8d8fa84c8c154356a43ba7be7d121fce7e73300cdf0f8d",
|
| 329 |
+
"language": "MATLAB",
|
| 330 |
+
"lines": 33,
|
| 331 |
+
"truncated": false,
|
| 332 |
+
"block": 19,
|
| 333 |
+
"row": 5333
|
| 334 |
+
},
|
| 335 |
+
{
|
| 336 |
+
"path": "7)HINT/1)Practice/SpeechTest.m",
|
| 337 |
+
"sha256": "d906769229e94dd43105e44c3a724d2b9147ce72d14fc393709d44b01959ca86",
|
| 338 |
+
"language": "MATLAB",
|
| 339 |
+
"lines": 279,
|
| 340 |
+
"truncated": false,
|
| 341 |
+
"block": 19,
|
| 342 |
+
"row": 7884
|
| 343 |
+
},
|
| 344 |
+
{
|
| 345 |
+
"path": "7)HINT/2)Check Practice/checkPractice.m",
|
| 346 |
+
"sha256": "bd6b4386cf5729d0fa07f335a49a4413b85dda1aaed4c9c61681decdd8959edc",
|
| 347 |
+
"language": "MATLAB",
|
| 348 |
+
"lines": 12,
|
| 349 |
+
"truncated": false,
|
| 350 |
+
"block": 19,
|
| 351 |
+
"row": 4630
|
| 352 |
+
},
|
| 353 |
+
{
|
| 354 |
+
"path": "7)HINT/3)Run Task/HINT_parameters.m",
|
| 355 |
+
"sha256": "77feebeb61f81cc14d4e6aa0cf5ddc4e69e199f2366b49e8e639e3eed41bc91e",
|
| 356 |
+
"language": "MATLAB",
|
| 357 |
+
"lines": 25,
|
| 358 |
+
"truncated": false,
|
| 359 |
+
"block": 19,
|
| 360 |
+
"row": 5324
|
| 361 |
+
},
|
| 362 |
+
{
|
| 363 |
+
"path": "7)HINT/3)Run Task/NewSubject_HINT.m",
|
| 364 |
+
"sha256": "f0bf1ae8db8ba66a8e8d45c9ec594182dcdd6a04c185b84ac995189500883cc6",
|
| 365 |
+
"language": "MATLAB",
|
| 366 |
+
"lines": 33,
|
| 367 |
+
"truncated": false,
|
| 368 |
+
"block": 19,
|
| 369 |
+
"row": 5381
|
| 370 |
+
},
|
| 371 |
+
{
|
| 372 |
+
"path": "7)HINT/3)Run Task/SpeechTest.m",
|
| 373 |
+
"sha256": "8e45c8332ebeef80fa5015d52d4a05d87dd15962e2d0d38ce5a7cf771d967db8",
|
| 374 |
+
"language": "MATLAB",
|
| 375 |
+
"lines": 295,
|
| 376 |
+
"truncated": false,
|
| 377 |
+
"block": 19,
|
| 378 |
+
"row": 7903
|
| 379 |
+
},
|
| 380 |
+
{
|
| 381 |
+
"path": "8)SpeechInformational/1)Practice/NewSubject_Practice_Info.m",
|
| 382 |
+
"sha256": "b31233094408d51ae5be804c0d78690a1cee3228c5aaac69d3745f5c130e037b",
|
| 383 |
+
"language": "MATLAB",
|
| 384 |
+
"lines": 37,
|
| 385 |
+
"truncated": false,
|
| 386 |
+
"block": 19,
|
| 387 |
+
"row": 5422
|
| 388 |
+
},
|
| 389 |
+
{
|
| 390 |
+
"path": "8)SpeechInformational/1)Practice/SpeechInformational_Practice.m",
|
| 391 |
+
"sha256": "e18ad97d1eb1daf211283260dca1adaf13da129cf83ff675c2f01cab13fd60f3",
|
| 392 |
+
"language": "MATLAB",
|
| 393 |
+
"lines": 391,
|
| 394 |
+
"truncated": false,
|
| 395 |
+
"block": 19,
|
| 396 |
+
"row": 8143
|
| 397 |
+
},
|
| 398 |
+
{
|
| 399 |
+
"path": "8)SpeechInformational/1)Practice/buttonColumnGUI.m",
|
| 400 |
+
"sha256": "5ac52bf00af4935e80ae61d023cc1741a06fa623d538fba7c915f3cde994e57d",
|
| 401 |
+
"language": "MATLAB",
|
| 402 |
+
"lines": 626,
|
| 403 |
+
"truncated": false,
|
| 404 |
+
"block": 19,
|
| 405 |
+
"row": 8138
|
| 406 |
+
},
|
| 407 |
+
{
|
| 408 |
+
"path": "8)SpeechInformational/1)Practice/parameters_practice.m",
|
| 409 |
+
"sha256": "5d61d28f7d540338d012f03cb706155e9431a4c858f795f6c61ca7bf47e18b92",
|
| 410 |
+
"language": "MATLAB",
|
| 411 |
+
"lines": 17,
|
| 412 |
+
"truncated": false,
|
| 413 |
+
"block": 19,
|
| 414 |
+
"row": 5025
|
| 415 |
+
},
|
| 416 |
+
{
|
| 417 |
+
"path": "8)SpeechInformational/2)CheckPractice/checkPractice.m",
|
| 418 |
+
"sha256": "f3a1faafc5ea24a708da8ced120f838adb48ea6b331775794d5d117a3352ad96",
|
| 419 |
+
"language": "MATLAB",
|
| 420 |
+
"lines": 12,
|
| 421 |
+
"truncated": false,
|
| 422 |
+
"block": 19,
|
| 423 |
+
"row": 4613
|
| 424 |
+
},
|
| 425 |
+
{
|
| 426 |
+
"path": "8)SpeechInformational/3)Run Task/NewSubject_Info.m",
|
| 427 |
+
"sha256": "bb834fa273c605d4b4f12faaddd85a4bc9fd4861c61fca87ed652dcc3b808495",
|
| 428 |
+
"language": "MATLAB",
|
| 429 |
+
"lines": 37,
|
| 430 |
+
"truncated": false,
|
| 431 |
+
"block": 19,
|
| 432 |
+
"row": 5427
|
| 433 |
+
},
|
| 434 |
+
{
|
| 435 |
+
"path": "8)SpeechInformational/3)Run Task/SpeechInformational.m",
|
| 436 |
+
"sha256": "191b01d225e832dde5616d952b53c68421e844ff9fefd57b54fab5c01e68dcec",
|
| 437 |
+
"language": "MATLAB",
|
| 438 |
+
"lines": 392,
|
| 439 |
+
"truncated": false,
|
| 440 |
+
"block": 19,
|
| 441 |
+
"row": 8142
|
| 442 |
+
},
|
| 443 |
+
{
|
| 444 |
+
"path": "8)SpeechInformational/3)Run Task/buttonColumnGUI.m",
|
| 445 |
+
"sha256": "5ac52bf00af4935e80ae61d023cc1741a06fa623d538fba7c915f3cde994e57d",
|
| 446 |
+
"language": "MATLAB",
|
| 447 |
+
"lines": 626,
|
| 448 |
+
"truncated": false,
|
| 449 |
+
"block": 19,
|
| 450 |
+
"row": 8138
|
| 451 |
+
},
|
| 452 |
+
{
|
| 453 |
+
"path": "8)SpeechInformational/3)Run Task/parameters.m",
|
| 454 |
+
"sha256": "5d61d28f7d540338d012f03cb706155e9431a4c858f795f6c61ca7bf47e18b92",
|
| 455 |
+
"language": "MATLAB",
|
| 456 |
+
"lines": 17,
|
| 457 |
+
"truncated": false,
|
| 458 |
+
"block": 19,
|
| 459 |
+
"row": 5025
|
| 460 |
+
},
|
| 461 |
+
{
|
| 462 |
+
"path": "9)HighFrequencyThresh/HighFrequencyThresh.m",
|
| 463 |
+
"sha256": "f533927f0830c660f348e4037821776d2e3f63ecb2dc3b40c988b80dc3e2bd27",
|
| 464 |
+
"language": "MATLAB",
|
| 465 |
+
"lines": 600,
|
| 466 |
+
"truncated": false,
|
| 467 |
+
"block": 19,
|
| 468 |
+
"row": 8203
|
| 469 |
+
},
|
| 470 |
+
{
|
| 471 |
+
"path": "9)HighFrequencyThresh/PsychtoolboxPostInstallRoutine.m",
|
| 472 |
+
"sha256": "029d6c3d7023c3495b988c1558c30bc8854e5df4abb89cd4393cc86a7a2dd3f3",
|
| 473 |
+
"language": "MATLAB",
|
| 474 |
+
"lines": 721,
|
| 475 |
+
"truncated": false,
|
| 476 |
+
"block": 19,
|
| 477 |
+
"row": 8293
|
| 478 |
+
},
|
| 479 |
+
{
|
| 480 |
+
"path": "9)HighFrequencyThresh/findnextpow2.m",
|
| 481 |
+
"sha256": "994ee972a87e6501181c3a3385c5922d6b73313812bb2d13c7d63ac0469e68a8",
|
| 482 |
+
"language": "MATLAB",
|
| 483 |
+
"lines": 12,
|
| 484 |
+
"truncated": false,
|
| 485 |
+
"block": 19,
|
| 486 |
+
"row": 4371
|
| 487 |
+
},
|
| 488 |
+
{
|
| 489 |
+
"path": "9)HighFrequencyThresh/makeNoiseBands.m",
|
| 490 |
+
"sha256": "f858e411869cbde5f4a099aa3e0c6a29c56de6c9e5e94c38785f290507ea533a",
|
| 491 |
+
"language": "MATLAB",
|
| 492 |
+
"lines": 87,
|
| 493 |
+
"truncated": false,
|
| 494 |
+
"block": 19,
|
| 495 |
+
"row": 6008
|
| 496 |
+
},
|
| 497 |
+
{
|
| 498 |
+
"path": "9)HighFrequencyThresh/pnoise.m",
|
| 499 |
+
"sha256": "f974119e7519f250e7c0598a7be941e871fa867ae984a8c2e1b70803978e0729",
|
| 500 |
+
"language": "MATLAB",
|
| 501 |
+
"lines": 51,
|
| 502 |
+
"truncated": false,
|
| 503 |
+
"block": 19,
|
| 504 |
+
"row": 5259
|
| 505 |
+
},
|
| 506 |
+
{
|
| 507 |
+
"path": "EEG_TopOfPath/AudioController.m",
|
| 508 |
+
"sha256": "89f52cbf2d8a142bae3e1264f90adef8c9090c34a8f5e700a892b78450c02a01",
|
| 509 |
+
"language": "MATLAB",
|
| 510 |
+
"lines": 301,
|
| 511 |
+
"truncated": false,
|
| 512 |
+
"block": 19,
|
| 513 |
+
"row": 7596
|
| 514 |
+
},
|
| 515 |
+
{
|
| 516 |
+
"path": "EEG_TopOfPath/cleanupError.m",
|
| 517 |
+
"sha256": "3c76f739af2036b6e2e8a7ae99a85b37a567053ef48bc785204ebd3bfd28a227",
|
| 518 |
+
"language": "MATLAB",
|
| 519 |
+
"lines": 14,
|
| 520 |
+
"truncated": false,
|
| 521 |
+
"block": 19,
|
| 522 |
+
"row": 4384
|
| 523 |
+
},
|
| 524 |
+
{
|
| 525 |
+
"path": "EEG_TopOfPath/closeCircuit.m",
|
| 526 |
+
"sha256": "0f67d798707af9e689e9be2b786f98479be760723492efc79b95240fef3a10e0",
|
| 527 |
+
"language": "MATLAB",
|
| 528 |
+
"lines": 11,
|
| 529 |
+
"truncated": false,
|
| 530 |
+
"block": 19,
|
| 531 |
+
"row": 4503
|
| 532 |
+
},
|
| 533 |
+
{
|
| 534 |
+
"path": "EEG_TopOfPath/getTDTRates.m",
|
| 535 |
+
"sha256": "9622756abb022f81d05d510fe373f362e912b4346eee165b2315f27e4cad5e47",
|
| 536 |
+
"language": "MATLAB",
|
| 537 |
+
"lines": 5,
|
| 538 |
+
"truncated": false,
|
| 539 |
+
"block": 19,
|
| 540 |
+
"row": 4409
|
| 541 |
+
},
|
| 542 |
+
{
|
| 543 |
+
"path": "EEG_TopOfPath/loadCircuit.m",
|
| 544 |
+
"sha256": "419f3da3c16c337e4ad3db1bd3512c788c49c8928098d3c3e9d309d01eed2938",
|
| 545 |
+
"language": "MATLAB",
|
| 546 |
+
"lines": 86,
|
| 547 |
+
"truncated": false,
|
| 548 |
+
"block": 19,
|
| 549 |
+
"row": 6161
|
| 550 |
+
},
|
| 551 |
+
{
|
| 552 |
+
"path": "LICENSE",
|
| 553 |
+
"sha256": "12ff360fb2a209682b9ddf2fd4eee315866a40972ebe71b1c9c3958ed2243742",
|
| 554 |
+
"language": "License",
|
| 555 |
+
"lines": 21,
|
| 556 |
+
"truncated": false,
|
| 557 |
+
"block": 19,
|
| 558 |
+
"row": 4221
|
| 559 |
+
},
|
| 560 |
+
{
|
| 561 |
+
"path": "README.md",
|
| 562 |
+
"sha256": "f10cfc7a83e21885e42663fe29d77c8723190dd834b4531357449d7f18a88687",
|
| 563 |
+
"language": "Text",
|
| 564 |
+
"lines": 25,
|
| 565 |
+
"truncated": false,
|
| 566 |
+
"block": 19,
|
| 567 |
+
"row": 16055
|
| 568 |
+
},
|
| 569 |
+
{
|
| 570 |
+
"path": "TopOfPath/hann.m",
|
| 571 |
+
"sha256": "2b486dbebff4d70ccda72ac562c6e80a9b29c8364563bfd2e5242b0d1e3f5f13",
|
| 572 |
+
"language": "MATLAB",
|
| 573 |
+
"lines": 29,
|
| 574 |
+
"truncated": false,
|
| 575 |
+
"block": 19,
|
| 576 |
+
"row": 4915
|
| 577 |
+
},
|
| 578 |
+
{
|
| 579 |
+
"path": "TopOfPath/scale.m",
|
| 580 |
+
"sha256": "f6e4b70cabc4f00fcbdf792d970ba95bcafec1b160843d3a73af749e2a171452",
|
| 581 |
+
"language": "MATLAB",
|
| 582 |
+
"lines": 10,
|
| 583 |
+
"truncated": false,
|
| 584 |
+
"block": 19,
|
| 585 |
+
"row": 4365
|
| 586 |
+
},
|
| 587 |
+
{
|
| 588 |
+
"path": "TopOfPath/spec.m",
|
| 589 |
+
"sha256": "26e78cb70e85a12ff64907fad9e2ad33e123fc8a55e6648dd2c183a277050d09",
|
| 590 |
+
"language": "MATLAB",
|
| 591 |
+
"lines": 35,
|
| 592 |
+
"truncated": false,
|
| 593 |
+
"block": 19,
|
| 594 |
+
"row": 4983
|
| 595 |
+
},
|
| 596 |
+
{
|
| 597 |
+
"path": "TopOfPath/tone.m",
|
| 598 |
+
"sha256": "a39f89de6008312688740a3d01bd738e490c115f52605180b4cae9746d872b1b",
|
| 599 |
+
"language": "MATLAB",
|
| 600 |
+
"lines": 21,
|
| 601 |
+
"truncated": false,
|
| 602 |
+
"block": 19,
|
| 603 |
+
"row": 4637
|
| 604 |
+
}
|
| 605 |
+
]
|
| 606 |
+
}
|
manifests/01/github.com__grivlis__utcs3_rgm.json
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
manifests/01/github.com__moothalab__ercc1-mouse-rob.json
ADDED
|
@@ -0,0 +1,102 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/moothalab/ercc1-mouse-rob",
|
| 4 |
+
"url": "https://github.com/MoothaLab/ercc1-mouse-rob",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "3be9367e02bedcd49ac022a0f5c14cb9a3dfec7a",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "085568b54afea18cdace1b300faae28777ad7260744a69aca0d84715e16c5e75",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 21,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4188
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "9ba74a51ac471344d13f216574bdeddcc333f2f81c51cb2f3192f0a2b3072cd0",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 8,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 15967
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "bulk_DNA_alignment_pipeline.py",
|
| 31 |
+
"sha256": "9feb39222bad14ac7208d0c5f3d9ed84aa762955c79c7261cb10f6c42c2c1f9e",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 216,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 13159
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "bulk_rna-seq_pipeline.py",
|
| 40 |
+
"sha256": "a49e86e341a4d245fd9c674c9a8643e47e63473ada05c94a99d4aef687d07ed9",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 324,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 13907
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "numt_masking_pipeline.py",
|
| 49 |
+
"sha256": "54127d57b45d41a9f8e009257ce29f681c3c6b7201a46282ae597069b3b447ce",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 433,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 14218
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "prioritize_chrM_over_numts.py",
|
| 58 |
+
"sha256": "b6daaf7d3572827e60d20a1dd12a84b5d091c3c08b2784781684da7621921e86",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 80,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 11655
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "reconcile_alignments.py",
|
| 67 |
+
"sha256": "41a4a0e505b8480afbe3ff39c33ca9713d4fc619eeffb465314b3fa46155b5c4",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 98,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 11675
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "run_custom_varcall.multiproc.py",
|
| 76 |
+
"sha256": "1858222bc4b41efef108fccece43c3769681c5df6cbee5fbf13aafe623be9fd2",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 801,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 14557
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "unshift_chrM_coords.py",
|
| 85 |
+
"sha256": "494083dcd9bdb19be51be04dd24240bf9e0e30b2803fa5f0e3325fbf3452b325",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 51,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 9956
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "wait_for_qsub_jobs.py",
|
| 94 |
+
"sha256": "8bf26ddc65ffecd342f6b930356d38045e5fb9b9310a3a3f304ee8d9f5f4bae9",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 57,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 10121
|
| 100 |
+
}
|
| 101 |
+
]
|
| 102 |
+
}
|
manifests/04/github.com__meldayeghaian__mmtsimtanet.json
ADDED
|
@@ -0,0 +1,201 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/meldayeghaian/mmtsimtanet",
|
| 4 |
+
"url": "https://github.com/MeldaYeghaian/MMTSimTANet",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "605995eba9319ad2e2801b692cce268e4f21b39a",
|
| 7 |
+
"license": "Apache-2.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "c71d239df91726fc519c6eb72d318ec65820627232b2f796219e87dcf35d0ab4",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 201,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2216
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "957a4b5f28e74d389fad8b48e8dce3edf5a10669f596f92dc908e5cb40b9ae0d",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 34,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16084
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "config/multimodal_cfg.py",
|
| 31 |
+
"sha256": "f722b1ce6a0d92b4e89a964be2583cfd8223c98071d4fef9880d830a81a8d990",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 92,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 9900
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "config/unimodal_cfg.py",
|
| 40 |
+
"sha256": "6cd93d7e3b42a5a1b69f490c7aed49c838025aa8125725971a99bdcaccb1c029",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 166,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 11528
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "dataset/dataset.py",
|
| 49 |
+
"sha256": "f4dfe747b485bfd1d4f95c5c99b0e33f158e8e156a6c696b96fb4cf29534ec0a",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 484,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 14207
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "engine/base_engine.py",
|
| 58 |
+
"sha256": "49f851a0a4bbfb8c1fe65da3e3d861e774564f354df7c4bcc31b07ba2cf80d9c",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 390,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 13954
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "engine/engines.py",
|
| 67 |
+
"sha256": "b6d95cfa8223adfd09993ce68fd48913dad94b836eea12c519411db924ad63b2",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 58,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 10144
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "logs/logging_config.py",
|
| 76 |
+
"sha256": "9420bf79cc22c2e6d8d26abe41965551d720de5a698c4b450d43b2ab0babb47f",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 15,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 8856
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "models/simta.py",
|
| 85 |
+
"sha256": "36b172fed60351d379038e2ba05f623e14cd7f04ac6c7eac3e53c2a71644fb66",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 284,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 13337
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "models/simta_transformer.py",
|
| 94 |
+
"sha256": "1df0c4abf5f2c0fb6f4f9428e53447a4dc50cf0e50ba0169f129609e44f6e9cf",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 254,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 13291
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "models/temporal_PE.py",
|
| 103 |
+
"sha256": "81d4fe43a3a3c902b669a4ac2182bdbef3085e075e94ffc90c6c839ac7aa2cc7",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 39,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 9493
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "run/evaluate_multimodel.py",
|
| 112 |
+
"sha256": "b18195fc74046702567d499d066d85a094d82b51353f8b0ace06b97677dad52a",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 79,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 10733
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "run/evaluate_unimodal.py",
|
| 121 |
+
"sha256": "12376708e64e93a7232eec79e654f169fc44223c646ce43f78768487034cf57f",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 73,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 10347
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "run/main_multimodal.py",
|
| 130 |
+
"sha256": "1d8ce58bcd7fcf93f5c2611bad49f1a4a76df57789b4bdd889b0f04f03925a77",
|
| 131 |
+
"language": "Python",
|
| 132 |
+
"lines": 79,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 11142
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "run/main_unimodal.py",
|
| 139 |
+
"sha256": "a614ea338b09e6cac44427ee327948a9093a83d842bcd9335f137153fe2f7db2",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 76,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 10862
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "utils/auc.py",
|
| 148 |
+
"sha256": "022f0c61d74fa82de11280ac1e26f7530222e89fb59f98984daa8d6022d054c9",
|
| 149 |
+
"language": "Python",
|
| 150 |
+
"lines": 14,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 8861
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "utils/base_metric.py",
|
| 157 |
+
"sha256": "3d14bbf471a6b769ff1f473838a519b33042fa2060e53ad9d3f2d314a91cabc2",
|
| 158 |
+
"language": "Python",
|
| 159 |
+
"lines": 91,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 10423
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "utils/cuda.py",
|
| 166 |
+
"sha256": "b2ff7aa8e24a9c31e74dd3390bf759c38f0746c78e0e6eb280e130413c14283f",
|
| 167 |
+
"language": "Python",
|
| 168 |
+
"lines": 15,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 8833
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "utils/focal_loss.py",
|
| 175 |
+
"sha256": "b7afeb8204e297a511270501f5f984ca212b84561566f8b600d9acd4e4893a6d",
|
| 176 |
+
"language": "Python",
|
| 177 |
+
"lines": 24,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 9174
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "utils/general.py",
|
| 184 |
+
"sha256": "c8e619dea7fbec02c848a6d51644a6f85584a9bd4506b539bcc8bf21d19143f1",
|
| 185 |
+
"language": "Python",
|
| 186 |
+
"lines": 181,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 12040
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "utils/record.py",
|
| 193 |
+
"sha256": "59f6f136b344fbaedcc22d938a219ef0de0c8b3d86badaa34dd0811fbabc388d",
|
| 194 |
+
"language": "Python",
|
| 195 |
+
"lines": 54,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 9798
|
| 199 |
+
}
|
| 200 |
+
]
|
| 201 |
+
}
|
manifests/04/github.com__mmunibas__halobenzenes.json
ADDED
|
@@ -0,0 +1,30 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/mmunibas/halobenzenes",
|
| 4 |
+
"url": "https://github.com/MMunibas/halobenzenes",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "ef4acdcac6ec3aefac4141e0fbb70993f0c1b5ac",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 674,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2235
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "33681700885f981cce5ebbf6c53c4527edb133faf6dfc8acbdcdb680c8b6b253",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 2,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 15945
|
| 28 |
+
}
|
| 29 |
+
]
|
| 30 |
+
}
|
manifests/05/github.com__franculino__vgm.json
ADDED
|
@@ -0,0 +1,462 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/franculino/vgm",
|
| 4 |
+
"url": "https://github.com/Franculino/vgm.git",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "92834c4b11787c6216af17134b0bba3aff299f06",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 674,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2235
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README",
|
| 22 |
+
"sha256": "b9d99e3fe4ae78564b4ffafb1165b418e2084ffcd439a7f2a3ee2178dfa8515d",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 24,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16008
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "__init__.py",
|
| 31 |
+
"sha256": "bc684ff7da9fac20be5e99d4583a73b5ae776f057dcfebacb7cc4a3eb4866e27",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 36,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 9288
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "core/__init__.py",
|
| 40 |
+
"sha256": "e4aa7eb97dc8c4e22c3a68598741d1291100680e0cf7177e7d6a0e10ec9cb523",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 55,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 9730
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "core/activation_and_barrels.py",
|
| 49 |
+
"sha256": "7be7bdacab94c91db5e4b27d36d4eea71881615445c158ab5ed32ea32477e641",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 1253,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 14603
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "core/dilation_and_splits.py",
|
| 58 |
+
"sha256": "44208c09e57aa2e23ded849c0803bf96bf92d01718ad58544250e803167a0237",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 260,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 13366
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "core/g_input.py",
|
| 67 |
+
"sha256": "fb908dda77434da353a8c6fec6c83252bfafffd7eb1896fdd5a7039b71aa597e",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 462,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 13957
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "core/hierarchicalApproach.py",
|
| 76 |
+
"sha256": "b6c409cea2548d23f1ce926f5d4938fbda8d69850fa96340216679f52da21a1b",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 128,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 12007
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "core/linearSystem.py",
|
| 85 |
+
"sha256": "a3eececb2241c7eb8f9aa3abaff7180ae61b74fa6af37836fa91d915c2733f78",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 247,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 13351
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "core/linearSystem_htd.py",
|
| 94 |
+
"sha256": "05bf4e5324d0c7ae9e3217eb3682cdfdd0070a3958ce40196c6d7166229f0ae5",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 1391,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 14591
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "core/linearSystem_htd_TotFixedDT.py",
|
| 103 |
+
"sha256": "fca01a42eaa47190cee8947526f337cf070fd532c7d6aeca92a7d8128872684d",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 2952,
|
| 106 |
+
"truncated": true,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 14659
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "core/linearSystem_htd_TotFixedDT_NEW.py",
|
| 112 |
+
"sha256": "9dfd8cde219d0f5e49a57eea0afae62b7dd6c54b0c80f8fc2a5a6cf9b35009f1",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 2727,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 14640
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "core/linearSystem_htd_TotFixedDT_NewNew.py",
|
| 121 |
+
"sha256": "b9606897768bc556849a9fb21a840914040ab9d15797ad367b99ed7b6786ec43",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 3351,
|
| 124 |
+
"truncated": true,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 14656
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "core/linearSystem_htd_TotFixedDT_StempRBCs.py",
|
| 130 |
+
"sha256": "8e2e4b5fea46401f7cdf18be2f337444e8342293015d5db30a2d614cd8be5b25",
|
| 131 |
+
"language": "Python",
|
| 132 |
+
"lines": 2959,
|
| 133 |
+
"truncated": true,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 14654
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "core/linearSystem_htd_TotFixedDT_StempRBCs_AvgBox.py",
|
| 139 |
+
"sha256": "7289f43232cb126d6d8eb51fb893552bffe6b625b8ffcab9036a70477ac7de9a",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 2967,
|
| 142 |
+
"truncated": true,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 14649
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "core/linearSystem_htd_TotFixedDT_nRBCint.py",
|
| 148 |
+
"sha256": "89f57701c6786b231c5146a21d7326e399f4d5ce22f3af29e0a0fc40d78bb2d9",
|
| 149 |
+
"language": "Python",
|
| 150 |
+
"lines": 2957,
|
| 151 |
+
"truncated": true,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 14652
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "core/linearSystem_htd_TotFixedDT_noBifRule.py",
|
| 157 |
+
"sha256": "cac9d8eb798250bd0afca60d926bbb8f96fd9e7ce6583675cb7c983da7a373ca",
|
| 158 |
+
"language": "Python",
|
| 159 |
+
"lines": 2958,
|
| 160 |
+
"truncated": true,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 14657
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "core/linearSystem_htd_TotFixedDT_passiveTracers.py",
|
| 166 |
+
"sha256": "7f2fd5b87787d070a1e16fd993d46ab505c72596ad5ed1684c72dedc2647b9e6",
|
| 167 |
+
"language": "Python",
|
| 168 |
+
"lines": 2958,
|
| 169 |
+
"truncated": true,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 14650
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "core/linearSystem_htd_TotFixedDT_withTracking.py",
|
| 175 |
+
"sha256": "4c2a6d209e33d890f59f17dcb6acd7d9e21082d8f8d16529094dc259486d3eab",
|
| 176 |
+
"language": "Python",
|
| 177 |
+
"lines": 2943,
|
| 178 |
+
"truncated": true,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 14646
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "core/linearSystem_htd_TotFixedDT_withTrackingBox.py",
|
| 184 |
+
"sha256": "64b8756cb83bda97bba2088c303eac89181076201592c146cc421f35c6ca7da6",
|
| 185 |
+
"language": "Python",
|
| 186 |
+
"lines": 3049,
|
| 187 |
+
"truncated": true,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 14648
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "core/linearSystem_htd_TotFixedDT_withTracking_passiveTracers.py",
|
| 193 |
+
"sha256": "b1df299e6cbc842037bd7f33862d070468744dfde08875dbceb5ca14845268a5",
|
| 194 |
+
"language": "Python",
|
| 195 |
+
"lines": 2943,
|
| 196 |
+
"truncated": true,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 14655
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "core/linearSystem_htd_TotFixedDT_withoutCount.py",
|
| 202 |
+
"sha256": "535f5a8354172a766acfa7dcecda203a85256ea3a04c4f01efabfe8a1351980e",
|
| 203 |
+
"language": "Python",
|
| 204 |
+
"lines": 2963,
|
| 205 |
+
"truncated": true,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 14647
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "core/linearSystem_pries.py",
|
| 211 |
+
"sha256": "65864fd7b4801f29a0f1c833d21ff01412dcdda616612cb2379b9a3f96d8c642",
|
| 212 |
+
"language": "Python",
|
| 213 |
+
"lines": 571,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 14337
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "core/linearSystem_timeCourse.py",
|
| 220 |
+
"sha256": "d74e518fcdefae8202fe6774d690b9498a9c9cb123751e28a993b2fd4e0e7cf3",
|
| 221 |
+
"language": "Python",
|
| 222 |
+
"lines": 294,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 13642
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "core/misc.py",
|
| 229 |
+
"sha256": "1ef27ad8d14fbdd623750cbff4fd1032e79127593d58f6b9233e0cb625b0f7cc",
|
| 230 |
+
"language": "Python",
|
| 231 |
+
"lines": 818,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 14438
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "core/paths.py",
|
| 238 |
+
"sha256": "2d7cf4d62598a7b739b12ddcf7b5c2dadb8557e7d1e0820fb95febe1a5ac4f79",
|
| 239 |
+
"language": "Python",
|
| 240 |
+
"lines": 574,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 14302
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "core/preprocessingKleinfeldNW.py",
|
| 247 |
+
"sha256": "eeed1e0d81ee6731fe5a42228ecbf6c8bcce9e66fa34fb3acf52cb88f9d1df60",
|
| 248 |
+
"language": "Python",
|
| 249 |
+
"lines": 1441,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 14605
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "core/units.py",
|
| 256 |
+
"sha256": "c4089fde65bff16132af8d874f78b7b4d3f14d6ed64e99ab5c09b9bc2a71d96f",
|
| 257 |
+
"language": "Python",
|
| 258 |
+
"lines": 45,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 9726
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "core/vascularGraph.py",
|
| 265 |
+
"sha256": "537179eca427273cee5deac9f860b60dd71c870a97f522d974686f0c3bde503b",
|
| 266 |
+
"language": "Python",
|
| 267 |
+
"lines": 2877,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 14637
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "doc/_build/html/_static/doctools.js",
|
| 274 |
+
"sha256": "8b9faeae765ee1e9afa8145ba4695652b2c4eebdaf698bc74f779e56e7f56415",
|
| 275 |
+
"language": "JavaScript",
|
| 276 |
+
"lines": 247,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 5,
|
| 279 |
+
"row": 14947
|
| 280 |
+
},
|
| 281 |
+
{
|
| 282 |
+
"path": "doc/_build/html/_static/jquery.js",
|
| 283 |
+
"sha256": "e23a2a4e2d7c2b41ebcdd8ffc0679df7140eb7f52e1eebabf827a88182643c59",
|
| 284 |
+
"language": "JavaScript",
|
| 285 |
+
"lines": 154,
|
| 286 |
+
"truncated": false,
|
| 287 |
+
"block": 19,
|
| 288 |
+
"row": 3744
|
| 289 |
+
},
|
| 290 |
+
{
|
| 291 |
+
"path": "doc/_build/html/_static/searchtools.js",
|
| 292 |
+
"sha256": "a7469788210da2c5ee8583b28f7aeafb8a5a7c56137d2b9e2a9bec8a8f690d45",
|
| 293 |
+
"language": "JavaScript",
|
| 294 |
+
"lines": 560,
|
| 295 |
+
"truncated": false,
|
| 296 |
+
"block": 19,
|
| 297 |
+
"row": 3732
|
| 298 |
+
},
|
| 299 |
+
{
|
| 300 |
+
"path": "doc/_build/html/_static/sidebar.js",
|
| 301 |
+
"sha256": "6b0e4fd814cedd6bb1369cf8926d4f397ec1e37637d00cff0e21dc265594c424",
|
| 302 |
+
"language": "JavaScript",
|
| 303 |
+
"lines": 151,
|
| 304 |
+
"truncated": false,
|
| 305 |
+
"block": 19,
|
| 306 |
+
"row": 3722
|
| 307 |
+
},
|
| 308 |
+
{
|
| 309 |
+
"path": "doc/_build/html/_static/underscore.js",
|
| 310 |
+
"sha256": "d5e0c52ccd3aee99f6562c12f8e261bb97c44795bafc4fe9bca29961d6843547",
|
| 311 |
+
"language": "JavaScript",
|
| 312 |
+
"lines": 23,
|
| 313 |
+
"truncated": false,
|
| 314 |
+
"block": 19,
|
| 315 |
+
"row": 3729
|
| 316 |
+
},
|
| 317 |
+
{
|
| 318 |
+
"path": "doc/_build/html/_static/websupport.js",
|
| 319 |
+
"sha256": "9a8a2f3ed9471f795195fe3340ff3263223f851a9a584637d30663d8ec7e13ed",
|
| 320 |
+
"language": "JavaScript",
|
| 321 |
+
"lines": 808,
|
| 322 |
+
"truncated": false,
|
| 323 |
+
"block": 19,
|
| 324 |
+
"row": 3737
|
| 325 |
+
},
|
| 326 |
+
{
|
| 327 |
+
"path": "doc/_build/html/searchindex.js",
|
| 328 |
+
"sha256": "808f757954b5855c307327efccea26856212a1ce0a6329ae6e799f02cdc2092f",
|
| 329 |
+
"language": "JavaScript",
|
| 330 |
+
"lines": 1,
|
| 331 |
+
"truncated": false,
|
| 332 |
+
"block": 19,
|
| 333 |
+
"row": 3734
|
| 334 |
+
},
|
| 335 |
+
{
|
| 336 |
+
"path": "doc/conf.py",
|
| 337 |
+
"sha256": "e6a889acb555d45333177ef86bd7bb313ac13faded51835cc540e43cee6ac7bc",
|
| 338 |
+
"language": "Python",
|
| 339 |
+
"lines": 251,
|
| 340 |
+
"truncated": false,
|
| 341 |
+
"block": 19,
|
| 342 |
+
"row": 12930
|
| 343 |
+
},
|
| 344 |
+
{
|
| 345 |
+
"path": "doc/patch/cython.py",
|
| 346 |
+
"sha256": "e302d4ece02844c7cb6bd0f5fbb22af19bc5d31c0bab15f8bd773066da0fe7d3",
|
| 347 |
+
"language": "Python",
|
| 348 |
+
"lines": 588,
|
| 349 |
+
"truncated": false,
|
| 350 |
+
"block": 19,
|
| 351 |
+
"row": 14146
|
| 352 |
+
},
|
| 353 |
+
{
|
| 354 |
+
"path": "logger.py",
|
| 355 |
+
"sha256": "137b64e746702085fd40a39ac0a0d9826822a71b099d809465523ba46757357f",
|
| 356 |
+
"language": "Python",
|
| 357 |
+
"lines": 101,
|
| 358 |
+
"truncated": false,
|
| 359 |
+
"block": 19,
|
| 360 |
+
"row": 10889
|
| 361 |
+
},
|
| 362 |
+
{
|
| 363 |
+
"path": "oldFiles_johannes/boundary_conditions.py",
|
| 364 |
+
"sha256": "847a25eb04a41abb9d5d9c5b22bd92765b29333cc735fd44e7ab7bc680ac123e",
|
| 365 |
+
"language": "Python",
|
| 366 |
+
"lines": 176,
|
| 367 |
+
"truncated": false,
|
| 368 |
+
"block": 19,
|
| 369 |
+
"row": 12877
|
| 370 |
+
},
|
| 371 |
+
{
|
| 372 |
+
"path": "oldFiles_johannes/connector.py",
|
| 373 |
+
"sha256": "0c097cd126205d52c76ea24f72b2d8d97d23a36c70c7dfce022cbdd4cc4df53c",
|
| 374 |
+
"language": "Python",
|
| 375 |
+
"lines": 120,
|
| 376 |
+
"truncated": false,
|
| 377 |
+
"block": 19,
|
| 378 |
+
"row": 11874
|
| 379 |
+
},
|
| 380 |
+
{
|
| 381 |
+
"path": "oldFiles_johannes/exchange.py",
|
| 382 |
+
"sha256": "2e9b8e2e40d2cff5f76ae17daa7cc0322b605baf00573acd81165e5cf8789924",
|
| 383 |
+
"language": "Python",
|
| 384 |
+
"lines": 159,
|
| 385 |
+
"truncated": false,
|
| 386 |
+
"block": 19,
|
| 387 |
+
"row": 12386
|
| 388 |
+
},
|
| 389 |
+
{
|
| 390 |
+
"path": "oldFiles_johannes/guiTools.py",
|
| 391 |
+
"sha256": "84c0e0339f519135682f441b65c5e41291303399fe15d59a27e1a7de72d44009",
|
| 392 |
+
"language": "Python",
|
| 393 |
+
"lines": 60,
|
| 394 |
+
"truncated": false,
|
| 395 |
+
"block": 19,
|
| 396 |
+
"row": 9732
|
| 397 |
+
},
|
| 398 |
+
{
|
| 399 |
+
"path": "oldFiles_johannes/preprocessing/__init__.py",
|
| 400 |
+
"sha256": "f6f03b02a7aea9bd11035edb2de36d3f9f0768f56c2f20d2e411656fb3019c1e",
|
| 401 |
+
"language": "Python",
|
| 402 |
+
"lines": 9,
|
| 403 |
+
"truncated": false,
|
| 404 |
+
"block": 19,
|
| 405 |
+
"row": 8642
|
| 406 |
+
},
|
| 407 |
+
{
|
| 408 |
+
"path": "oldFiles_johannes/preprocessing/reconnection.py",
|
| 409 |
+
"sha256": "0b49cf8b25061e8d43db4246697370b64c7779ca2962b655c3205fd42a73d1b4",
|
| 410 |
+
"language": "Python",
|
| 411 |
+
"lines": 451,
|
| 412 |
+
"truncated": false,
|
| 413 |
+
"block": 19,
|
| 414 |
+
"row": 14170
|
| 415 |
+
},
|
| 416 |
+
{
|
| 417 |
+
"path": "oldFiles_johannes/preprocessing/rescaling.py",
|
| 418 |
+
"sha256": "6684563a2f5750b0589b9f20c33cfbebfa43387d35e4716c9b4eefe7d036b53c",
|
| 419 |
+
"language": "Python",
|
| 420 |
+
"lines": 374,
|
| 421 |
+
"truncated": false,
|
| 422 |
+
"block": 19,
|
| 423 |
+
"row": 13931
|
| 424 |
+
},
|
| 425 |
+
{
|
| 426 |
+
"path": "oldFiles_johannes/preprocessing/slabs.py",
|
| 427 |
+
"sha256": "8850d453b9c308bacdfbb9ee00f72efc112b84d52c38aa7bfe79ece131e40860",
|
| 428 |
+
"language": "Python",
|
| 429 |
+
"lines": 55,
|
| 430 |
+
"truncated": false,
|
| 431 |
+
"block": 19,
|
| 432 |
+
"row": 9604
|
| 433 |
+
},
|
| 434 |
+
{
|
| 435 |
+
"path": "oldFiles_johannes/preprocessing/transformation.py",
|
| 436 |
+
"sha256": "c94b6e7ee366e0d9fe5866b1c805dd559596d66e0d5ac388e57b1b8f2c01724f",
|
| 437 |
+
"language": "Python",
|
| 438 |
+
"lines": 194,
|
| 439 |
+
"truncated": false,
|
| 440 |
+
"block": 19,
|
| 441 |
+
"row": 12656
|
| 442 |
+
},
|
| 443 |
+
{
|
| 444 |
+
"path": "oldFiles_johannes/upscaling.py",
|
| 445 |
+
"sha256": "4f4de7fd554676674d9e9b696ccafde1637fc13b3c6860316dc5d1bc14cc676b",
|
| 446 |
+
"language": "Python",
|
| 447 |
+
"lines": 115,
|
| 448 |
+
"truncated": false,
|
| 449 |
+
"block": 19,
|
| 450 |
+
"row": 11571
|
| 451 |
+
},
|
| 452 |
+
{
|
| 453 |
+
"path": "setup.py",
|
| 454 |
+
"sha256": "02995c02fa088697587766975723d2874d01f1d2e3eab196637350d4117d5094",
|
| 455 |
+
"language": "Python",
|
| 456 |
+
"lines": 8,
|
| 457 |
+
"truncated": false,
|
| 458 |
+
"block": 19,
|
| 459 |
+
"row": 8727
|
| 460 |
+
}
|
| 461 |
+
]
|
| 462 |
+
}
|
manifests/06/zenodo__1304771.json
ADDED
|
@@ -0,0 +1,93 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:1304771",
|
| 4 |
+
"url": "https://zenodo.org/records/1304771",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "DataViewer.m",
|
| 13 |
+
"sha256": "4a40333fcf574304a9c595f48c851142b2581a9adde22e91e1baf0da230e3ab0",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 736,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 8256
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "PalaPetersen_Analysis.m",
|
| 22 |
+
"sha256": "03d3cc4ff3f49692e5f9eff69520d174c3e1ad2afd670b6213e75f2339878ef2",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 993,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 8316
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "PalaPetersen_Plot.m",
|
| 31 |
+
"sha256": "991305306c26c2b07e46a6918993456319cd2ec3b117a88d97f2c07016a7a966",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 1143,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 8335
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "blankAPs.m",
|
| 40 |
+
"sha256": "25b7ea1c24178ab00fada8225684f51b681c89b26eaade626effd49a4a0f2a8e",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 24,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 4771
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "lowpassfilt.m",
|
| 49 |
+
"sha256": "563acf8cbd565c81417c7020c58c12e3c9ede69950e9ea0d28e3fec9d1613a2f",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 18,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 4687
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "medianFiltAPs.m",
|
| 58 |
+
"sha256": "cf77c4f24fbce17d58856cea3f893125234699cb985625b591ceab59d31c8363",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 7,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 4363
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "remTrialswithAPs.m",
|
| 67 |
+
"sha256": "8b4ddc1eed310ff78e3ae1c5194159925791c84679c05036ee047302490069ea",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 12,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 4595
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "retrieveSegDur.m",
|
| 76 |
+
"sha256": "c11dc1afa8f095b447ab9cbce7754bb2c0095e0053e79bd954f57080ef431222",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 38,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 4917
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "suptitleAP.m",
|
| 85 |
+
"sha256": "173c3902d4232dd1874343e3a88352fd0e5bceba5d12ed18a6bc333b4ce755f9",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 111,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 6286
|
| 91 |
+
}
|
| 92 |
+
]
|
| 93 |
+
}
|
manifests/0a/zenodo__7598955.json
ADDED
|
@@ -0,0 +1,30 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:7598955",
|
| 4 |
+
"url": "10.5281/ZENODO.7598955",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "589ed823e9a84c56feb95ac58e7cf384626b9cbf4fda2a907bc36e103de1bad2",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 674,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2232
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "a7396eae2cda0a1e577df727adffe1c7be7500dd1470f2b0993b60d26f280808",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 35,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16039
|
| 28 |
+
}
|
| 29 |
+
]
|
| 30 |
+
}
|
manifests/0a/zenodo__7612119.json
ADDED
|
@@ -0,0 +1,1650 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:7612119",
|
| 4 |
+
"url": "10.5281/zenodo.7612119",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "BSD-3-Clause",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE.txt",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE.txt",
|
| 13 |
+
"sha256": "ea5f5c0b584998435f1cd3f9d4d27848f7faf45004b0a117ffb61c37f4ccfe46",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 29,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4281
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "c98db3c6cf121f2c41c08dc743598625b9bf2c246f80a2b81938bf0ebf9be0e2",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 147,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16200
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "data/code/create_dataset_description_json.sh",
|
| 31 |
+
"sha256": "116d81bbb64b4619752a00eba814349505305a6d70cbff56dcf2ae527a41fb86",
|
| 32 |
+
"language": "Shell",
|
| 33 |
+
"lines": 23,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 15345
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "data/code/create_scan_preproc_json.sh",
|
| 40 |
+
"sha256": "cdaae2952febb9eda7d944d78cf19c949238ac3c996f7c4de63e0ebe3bc7340e",
|
| 41 |
+
"language": "Shell",
|
| 42 |
+
"lines": 25,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 15361
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "data/code/superresolution_batch.sh",
|
| 49 |
+
"sha256": "8b052b1b8899ee19f0420ead0f2f79958238e50d43063cfcb0c8c878232c86ff",
|
| 50 |
+
"language": "Shell",
|
| 51 |
+
"lines": 118,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 15765
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "data/code/superresolution_pipeline.sh",
|
| 58 |
+
"sha256": "dc84a1831326fb95c87ad3bba78f20a13fc31127e6df8d8c36daa1421f30cc4c",
|
| 59 |
+
"language": "Shell",
|
| 60 |
+
"lines": 392,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 15905
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "docker/bidsapp/entrypoints/run_srr.sh",
|
| 67 |
+
"sha256": "f8ac4f94cd40db36c5acf9c5bc2b7b3d034e90205d5e001678a22100d242bb75",
|
| 68 |
+
"language": "Shell",
|
| 69 |
+
"lines": 6,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 15250
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "docker/bidsapp/entrypoints/run_srr_coverage.sh",
|
| 76 |
+
"sha256": "f0db336b97249c8edfadebcf741941af73ded0dbcbda3810c80279d68027a134",
|
| 77 |
+
"language": "Shell",
|
| 78 |
+
"lines": 11,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 15336
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "docker/bidsapp/run.py",
|
| 85 |
+
"sha256": "8555ce65fef8d168d88f267792b12d68352fa953512b698c166b847fed3ca460",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 513,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 14019
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "documentation/conf.py",
|
| 94 |
+
"sha256": "0326efbc78284f5e3b997e864b34bf91d3f56d1f360212afbcc4683fa20f495f",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 385,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 13440
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "documentation/doxygen_html/dynsections.js",
|
| 103 |
+
"sha256": "ba0983534deeb671b855f484d2736a7841a689645afd0908618d5fe81b8e09c8",
|
| 104 |
+
"language": "JavaScript",
|
| 105 |
+
"lines": 97,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 3714
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "documentation/doxygen_html/jquery.js",
|
| 112 |
+
"sha256": "41be88ac0efcea8e7c62a8d2b1662b2245ebd49abf250cfab234b2a94786562b",
|
| 113 |
+
"language": "JavaScript",
|
| 114 |
+
"lines": 31,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 3745
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "documentation/doxygen_html/search/all_0.js",
|
| 121 |
+
"sha256": "5421f54fbc7362c3669003cadc87d42fccef9af5481adb188ccf28b019807049",
|
| 122 |
+
"language": "JavaScript",
|
| 123 |
+
"lines": 13,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 3723
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "documentation/doxygen_html/search/all_1.js",
|
| 130 |
+
"sha256": "8ec45911ea49acec99088abb1ba7f79991cc856055b19b55b4a0e1139e8915d7",
|
| 131 |
+
"language": "JavaScript",
|
| 132 |
+
"lines": 9,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 3669
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "documentation/doxygen_html/search/all_10.js",
|
| 139 |
+
"sha256": "a67ffc27042753f60f8340bcd9d6bdf5e4e8708437303a09c8453bfa9a551304",
|
| 140 |
+
"language": "JavaScript",
|
| 141 |
+
"lines": 12,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 3719
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "documentation/doxygen_html/search/all_11.js",
|
| 148 |
+
"sha256": "abf6297cdc762270d93e9d070adc3c7d97cf339f5d705e8a00a6d781dc9ae738",
|
| 149 |
+
"language": "JavaScript",
|
| 150 |
+
"lines": 12,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 3715
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "documentation/doxygen_html/search/all_12.js",
|
| 157 |
+
"sha256": "3bee46f347343ded75451c8e132980b970118c3541cb80bd5c59107c599e7c44",
|
| 158 |
+
"language": "JavaScript",
|
| 159 |
+
"lines": 9,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 3686
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "documentation/doxygen_html/search/all_13.js",
|
| 166 |
+
"sha256": "cd2168dc64739db796d8b55b96c0e40976cff0dd3833a605fba26c3f4a958252",
|
| 167 |
+
"language": "JavaScript",
|
| 168 |
+
"lines": 9,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 3694
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "documentation/doxygen_html/search/all_14.js",
|
| 175 |
+
"sha256": "a6d2c6f6e4781e0dc708f1c6cdd5847c758fc10f28a489d7c84631dc9d8efaa4",
|
| 176 |
+
"language": "JavaScript",
|
| 177 |
+
"lines": 10,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 3681
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "documentation/doxygen_html/search/all_2.js",
|
| 184 |
+
"sha256": "e41d1e7778e9e3a77b27f850a08d6396db4b43372286801155b0db2af52ab64b",
|
| 185 |
+
"language": "JavaScript",
|
| 186 |
+
"lines": 30,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 3728
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "documentation/doxygen_html/search/all_3.js",
|
| 193 |
+
"sha256": "123635210b1fdef1390698f27dc524c9c715ed5a55c9116f9a89ec20120448d6",
|
| 194 |
+
"language": "JavaScript",
|
| 195 |
+
"lines": 5,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 3667
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "documentation/doxygen_html/search/all_4.js",
|
| 202 |
+
"sha256": "fc839f6db619196a0e507a5247fe0523d1796136133d8a0d43504db5a8c07c8c",
|
| 203 |
+
"language": "JavaScript",
|
| 204 |
+
"lines": 11,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 3700
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "documentation/doxygen_html/search/all_5.js",
|
| 211 |
+
"sha256": "41c792d1ce0751e7e546f0c2a7f521d72f83a18ede3aeba2ff3246a05d8f9857",
|
| 212 |
+
"language": "JavaScript",
|
| 213 |
+
"lines": 12,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 3688
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "documentation/doxygen_html/search/all_6.js",
|
| 220 |
+
"sha256": "014317b7df256582d059eb21f52aecf4fa044f06f3ad6ba32c9151e07d7ebdc3",
|
| 221 |
+
"language": "JavaScript",
|
| 222 |
+
"lines": 47,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 3731
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "documentation/doxygen_html/search/all_7.js",
|
| 229 |
+
"sha256": "8a7724f19365f94fada549b7c91cd4699f95861032cf5669c545366dca53a733",
|
| 230 |
+
"language": "JavaScript",
|
| 231 |
+
"lines": 48,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 3742
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "documentation/doxygen_html/search/all_8.js",
|
| 238 |
+
"sha256": "6b6503f7f2f47387e97ad9074ebb789ec534b4cd788ebef5581da1f814ee1a8e",
|
| 239 |
+
"language": "JavaScript",
|
| 240 |
+
"lines": 4,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 3631
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "documentation/doxygen_html/search/all_9.js",
|
| 247 |
+
"sha256": "d53dfa0207911f95815f1e47c8a9d596206df34880368c8dd4fbe90b76783483",
|
| 248 |
+
"language": "JavaScript",
|
| 249 |
+
"lines": 7,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 3676
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "documentation/doxygen_html/search/all_a.js",
|
| 256 |
+
"sha256": "9744505fe2eefaad0c97b1f3e854d049f4405c0c32e681bdd5bbf5e9be065d50",
|
| 257 |
+
"language": "JavaScript",
|
| 258 |
+
"lines": 20,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 3710
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "documentation/doxygen_html/search/all_b.js",
|
| 265 |
+
"sha256": "1f3f87213ed872096f523454b7310a1589b16c325ce4450ee8c547212c094d92",
|
| 266 |
+
"language": "JavaScript",
|
| 267 |
+
"lines": 6,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 3641
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "documentation/doxygen_html/search/all_c.js",
|
| 274 |
+
"sha256": "657e17f9cef8ddd05d815b17432826cda53c340fad66759244c0c218589c3b84",
|
| 275 |
+
"language": "JavaScript",
|
| 276 |
+
"lines": 10,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 19,
|
| 279 |
+
"row": 3707
|
| 280 |
+
},
|
| 281 |
+
{
|
| 282 |
+
"path": "documentation/doxygen_html/search/all_d.js",
|
| 283 |
+
"sha256": "2fe5e6467256ec6c22d2028ffb49a988905ee8c5e3b7b57f69d8278668e9f12d",
|
| 284 |
+
"language": "JavaScript",
|
| 285 |
+
"lines": 12,
|
| 286 |
+
"truncated": false,
|
| 287 |
+
"block": 19,
|
| 288 |
+
"row": 3717
|
| 289 |
+
},
|
| 290 |
+
{
|
| 291 |
+
"path": "documentation/doxygen_html/search/all_e.js",
|
| 292 |
+
"sha256": "1784f100705fd76c58ffd6ca0afa7e30a95c62bd8ace379e992a7143e3dcaf64",
|
| 293 |
+
"language": "JavaScript",
|
| 294 |
+
"lines": 16,
|
| 295 |
+
"truncated": false,
|
| 296 |
+
"block": 19,
|
| 297 |
+
"row": 3704
|
| 298 |
+
},
|
| 299 |
+
{
|
| 300 |
+
"path": "documentation/doxygen_html/search/all_f.js",
|
| 301 |
+
"sha256": "61b6a4fab1832a055ffc13ee51d1c14c1df8027ef92bfd68546ef889a22fe7aa",
|
| 302 |
+
"language": "JavaScript",
|
| 303 |
+
"lines": 82,
|
| 304 |
+
"truncated": false,
|
| 305 |
+
"block": 19,
|
| 306 |
+
"row": 3738
|
| 307 |
+
},
|
| 308 |
+
{
|
| 309 |
+
"path": "documentation/doxygen_html/search/classes_0.js",
|
| 310 |
+
"sha256": "0ea010ff0a7d88a8886e0ba6e254957b9aa13c8d9d067e9abde78668bd42be90",
|
| 311 |
+
"language": "JavaScript",
|
| 312 |
+
"lines": 6,
|
| 313 |
+
"truncated": false,
|
| 314 |
+
"block": 19,
|
| 315 |
+
"row": 3643
|
| 316 |
+
},
|
| 317 |
+
{
|
| 318 |
+
"path": "documentation/doxygen_html/search/classes_1.js",
|
| 319 |
+
"sha256": "40e5e13d0e7ce1f26175f7230b1481bf7677a3a755c91cb17c89157e97ad5e3b",
|
| 320 |
+
"language": "JavaScript",
|
| 321 |
+
"lines": 7,
|
| 322 |
+
"truncated": false,
|
| 323 |
+
"block": 19,
|
| 324 |
+
"row": 3653
|
| 325 |
+
},
|
| 326 |
+
{
|
| 327 |
+
"path": "documentation/doxygen_html/search/classes_10.js",
|
| 328 |
+
"sha256": "4d41933c29e14b20fce78e029b7c72149653f2d976cfc2a00448181b09041ab0",
|
| 329 |
+
"language": "JavaScript",
|
| 330 |
+
"lines": 4,
|
| 331 |
+
"truncated": false,
|
| 332 |
+
"block": 19,
|
| 333 |
+
"row": 3608
|
| 334 |
+
},
|
| 335 |
+
{
|
| 336 |
+
"path": "documentation/doxygen_html/search/classes_2.js",
|
| 337 |
+
"sha256": "700b3a14ac2c1020dae7d25e20ecb1e52b5bb0bae140002dbcb203d301ea90c5",
|
| 338 |
+
"language": "JavaScript",
|
| 339 |
+
"lines": 5,
|
| 340 |
+
"truncated": false,
|
| 341 |
+
"block": 19,
|
| 342 |
+
"row": 3625
|
| 343 |
+
},
|
| 344 |
+
{
|
| 345 |
+
"path": "documentation/doxygen_html/search/classes_3.js",
|
| 346 |
+
"sha256": "a6bc089cb531610a76b8f5ec49fd85e052af6c08fee702c4de19f24d70c8f639",
|
| 347 |
+
"language": "JavaScript",
|
| 348 |
+
"lines": 5,
|
| 349 |
+
"truncated": false,
|
| 350 |
+
"block": 19,
|
| 351 |
+
"row": 3626
|
| 352 |
+
},
|
| 353 |
+
{
|
| 354 |
+
"path": "documentation/doxygen_html/search/classes_4.js",
|
| 355 |
+
"sha256": "078d5c59190b42364f34ecb5be29de5eac1c85aba403779d71d523d5b9045e8d",
|
| 356 |
+
"language": "JavaScript",
|
| 357 |
+
"lines": 10,
|
| 358 |
+
"truncated": false,
|
| 359 |
+
"block": 19,
|
| 360 |
+
"row": 3675
|
| 361 |
+
},
|
| 362 |
+
{
|
| 363 |
+
"path": "documentation/doxygen_html/search/classes_5.js",
|
| 364 |
+
"sha256": "6b6503f7f2f47387e97ad9074ebb789ec534b4cd788ebef5581da1f814ee1a8e",
|
| 365 |
+
"language": "JavaScript",
|
| 366 |
+
"lines": 4,
|
| 367 |
+
"truncated": false,
|
| 368 |
+
"block": 19,
|
| 369 |
+
"row": 3631
|
| 370 |
+
},
|
| 371 |
+
{
|
| 372 |
+
"path": "documentation/doxygen_html/search/classes_6.js",
|
| 373 |
+
"sha256": "d74c0f2dfd51f19296820651fbdc7438ff8526e7d5fa7c00618c56a9cdd7116b",
|
| 374 |
+
"language": "JavaScript",
|
| 375 |
+
"lines": 6,
|
| 376 |
+
"truncated": false,
|
| 377 |
+
"block": 19,
|
| 378 |
+
"row": 3649
|
| 379 |
+
},
|
| 380 |
+
{
|
| 381 |
+
"path": "documentation/doxygen_html/search/classes_7.js",
|
| 382 |
+
"sha256": "dce745dfff6c486ad3df379cc0bc2d27a9ce94dd739c8c29182c4a1aee2e465c",
|
| 383 |
+
"language": "JavaScript",
|
| 384 |
+
"lines": 5,
|
| 385 |
+
"truncated": false,
|
| 386 |
+
"block": 19,
|
| 387 |
+
"row": 3633
|
| 388 |
+
},
|
| 389 |
+
{
|
| 390 |
+
"path": "documentation/doxygen_html/search/classes_8.js",
|
| 391 |
+
"sha256": "31b64edf8a88dfb0e374ea29b8f83bd607e6586bdb01f9b14f2ad3d2a6984dc9",
|
| 392 |
+
"language": "JavaScript",
|
| 393 |
+
"lines": 5,
|
| 394 |
+
"truncated": false,
|
| 395 |
+
"block": 19,
|
| 396 |
+
"row": 3604
|
| 397 |
+
},
|
| 398 |
+
{
|
| 399 |
+
"path": "documentation/doxygen_html/search/classes_9.js",
|
| 400 |
+
"sha256": "eac234399a378ff5c2d60d47147968fc973fce985989da84ec6ca21ed9b16835",
|
| 401 |
+
"language": "JavaScript",
|
| 402 |
+
"lines": 4,
|
| 403 |
+
"truncated": false,
|
| 404 |
+
"block": 19,
|
| 405 |
+
"row": 3611
|
| 406 |
+
},
|
| 407 |
+
{
|
| 408 |
+
"path": "documentation/doxygen_html/search/classes_a.js",
|
| 409 |
+
"sha256": "9c2cc5d1d8f29e2f2a47e40857782cd40e9af9e95b58428809fe061fd06bdf3a",
|
| 410 |
+
"language": "JavaScript",
|
| 411 |
+
"lines": 4,
|
| 412 |
+
"truncated": false,
|
| 413 |
+
"block": 19,
|
| 414 |
+
"row": 3598
|
| 415 |
+
},
|
| 416 |
+
{
|
| 417 |
+
"path": "documentation/doxygen_html/search/classes_b.js",
|
| 418 |
+
"sha256": "6b23566ce5e3f5e0ef1dd266a4ced8f8d7c5c9cb41c54fdaed22d1263aea7de4",
|
| 419 |
+
"language": "JavaScript",
|
| 420 |
+
"lines": 8,
|
| 421 |
+
"truncated": false,
|
| 422 |
+
"block": 19,
|
| 423 |
+
"row": 3662
|
| 424 |
+
},
|
| 425 |
+
{
|
| 426 |
+
"path": "documentation/doxygen_html/search/classes_c.js",
|
| 427 |
+
"sha256": "191b964a383e39c48e7821ae5ad1d44207d7219d7c2dabe91582fb4384e61eb5",
|
| 428 |
+
"language": "JavaScript",
|
| 429 |
+
"lines": 8,
|
| 430 |
+
"truncated": false,
|
| 431 |
+
"block": 19,
|
| 432 |
+
"row": 3664
|
| 433 |
+
},
|
| 434 |
+
{
|
| 435 |
+
"path": "documentation/doxygen_html/search/classes_d.js",
|
| 436 |
+
"sha256": "5f449898c915b0dd43884567cc47e71b5138d3211a0536ab7aa4d4822f090623",
|
| 437 |
+
"language": "JavaScript",
|
| 438 |
+
"lines": 5,
|
| 439 |
+
"truncated": false,
|
| 440 |
+
"block": 19,
|
| 441 |
+
"row": 3646
|
| 442 |
+
},
|
| 443 |
+
{
|
| 444 |
+
"path": "documentation/doxygen_html/search/classes_e.js",
|
| 445 |
+
"sha256": "1155de78b20fd417922e9e2c96038cc0c94bd3d1b1781a527143bec18089afae",
|
| 446 |
+
"language": "JavaScript",
|
| 447 |
+
"lines": 4,
|
| 448 |
+
"truncated": false,
|
| 449 |
+
"block": 19,
|
| 450 |
+
"row": 3621
|
| 451 |
+
},
|
| 452 |
+
{
|
| 453 |
+
"path": "documentation/doxygen_html/search/classes_f.js",
|
| 454 |
+
"sha256": "3cb913e7728d309f9a50ae97214c507b148f0be2ad92c86fc06d53f121da753b",
|
| 455 |
+
"language": "JavaScript",
|
| 456 |
+
"lines": 5,
|
| 457 |
+
"truncated": false,
|
| 458 |
+
"block": 19,
|
| 459 |
+
"row": 3632
|
| 460 |
+
},
|
| 461 |
+
{
|
| 462 |
+
"path": "documentation/doxygen_html/search/enums_0.js",
|
| 463 |
+
"sha256": "25eccd7ef91b7c54495fa0d2b49ed57cccacba03baf8ff8810d89353d854a1f8",
|
| 464 |
+
"language": "JavaScript",
|
| 465 |
+
"lines": 4,
|
| 466 |
+
"truncated": false,
|
| 467 |
+
"block": 19,
|
| 468 |
+
"row": 3619
|
| 469 |
+
},
|
| 470 |
+
{
|
| 471 |
+
"path": "documentation/doxygen_html/search/enums_1.js",
|
| 472 |
+
"sha256": "1c2fa4e403bd899333563566e762a82f861ca45cb4150b612d0ee6d0ec8d3283",
|
| 473 |
+
"language": "JavaScript",
|
| 474 |
+
"lines": 4,
|
| 475 |
+
"truncated": false,
|
| 476 |
+
"block": 19,
|
| 477 |
+
"row": 3616
|
| 478 |
+
},
|
| 479 |
+
{
|
| 480 |
+
"path": "documentation/doxygen_html/search/functions_0.js",
|
| 481 |
+
"sha256": "b8a1c0ca9a298cceac4aaadf87aa25d2a2d409bc2299ebd79044e22a795abacb",
|
| 482 |
+
"language": "JavaScript",
|
| 483 |
+
"lines": 12,
|
| 484 |
+
"truncated": false,
|
| 485 |
+
"block": 19,
|
| 486 |
+
"row": 3721
|
| 487 |
+
},
|
| 488 |
+
{
|
| 489 |
+
"path": "documentation/doxygen_html/search/functions_1.js",
|
| 490 |
+
"sha256": "fdf59ab167e6074d167b1adce3bf5c07e365a06ea655addd6a85f2e02328fef6",
|
| 491 |
+
"language": "JavaScript",
|
| 492 |
+
"lines": 6,
|
| 493 |
+
"truncated": false,
|
| 494 |
+
"block": 19,
|
| 495 |
+
"row": 3650
|
| 496 |
+
},
|
| 497 |
+
{
|
| 498 |
+
"path": "documentation/doxygen_html/search/functions_10.js",
|
| 499 |
+
"sha256": "6c1b8d6acc8121ffe02be0b9c6144cc0d84cb1530dabf86c57aef96fcd466255",
|
| 500 |
+
"language": "JavaScript",
|
| 501 |
+
"lines": 8,
|
| 502 |
+
"truncated": false,
|
| 503 |
+
"block": 19,
|
| 504 |
+
"row": 3690
|
| 505 |
+
},
|
| 506 |
+
{
|
| 507 |
+
"path": "documentation/doxygen_html/search/functions_11.js",
|
| 508 |
+
"sha256": "a6d2c6f6e4781e0dc708f1c6cdd5847c758fc10f28a489d7c84631dc9d8efaa4",
|
| 509 |
+
"language": "JavaScript",
|
| 510 |
+
"lines": 10,
|
| 511 |
+
"truncated": false,
|
| 512 |
+
"block": 19,
|
| 513 |
+
"row": 3681
|
| 514 |
+
},
|
| 515 |
+
{
|
| 516 |
+
"path": "documentation/doxygen_html/search/functions_2.js",
|
| 517 |
+
"sha256": "5da4ac2d23bb17a000db594d22ee69210091ff832c1af2f9014396479cf004c0",
|
| 518 |
+
"language": "JavaScript",
|
| 519 |
+
"lines": 20,
|
| 520 |
+
"truncated": false,
|
| 521 |
+
"block": 19,
|
| 522 |
+
"row": 3725
|
| 523 |
+
},
|
| 524 |
+
{
|
| 525 |
+
"path": "documentation/doxygen_html/search/functions_3.js",
|
| 526 |
+
"sha256": "5b3f21fb678c094c84def5ee33995c6b29411f96e859415ffdd3f75d7936633c",
|
| 527 |
+
"language": "JavaScript",
|
| 528 |
+
"lines": 4,
|
| 529 |
+
"truncated": false,
|
| 530 |
+
"block": 19,
|
| 531 |
+
"row": 3606
|
| 532 |
+
},
|
| 533 |
+
{
|
| 534 |
+
"path": "documentation/doxygen_html/search/functions_4.js",
|
| 535 |
+
"sha256": "fc839f6db619196a0e507a5247fe0523d1796136133d8a0d43504db5a8c07c8c",
|
| 536 |
+
"language": "JavaScript",
|
| 537 |
+
"lines": 11,
|
| 538 |
+
"truncated": false,
|
| 539 |
+
"block": 19,
|
| 540 |
+
"row": 3700
|
| 541 |
+
},
|
| 542 |
+
{
|
| 543 |
+
"path": "documentation/doxygen_html/search/functions_5.js",
|
| 544 |
+
"sha256": "649393db3c213f03d9a6ab7af7cf47e9a32d5d886764958b9cd5ca53bc902eec",
|
| 545 |
+
"language": "JavaScript",
|
| 546 |
+
"lines": 7,
|
| 547 |
+
"truncated": false,
|
| 548 |
+
"block": 19,
|
| 549 |
+
"row": 3652
|
| 550 |
+
},
|
| 551 |
+
{
|
| 552 |
+
"path": "documentation/doxygen_html/search/functions_6.js",
|
| 553 |
+
"sha256": "a2b82ab3cef628c64a52a52cfc69c2bea685d7b909353cd2ab3e493464905e75",
|
| 554 |
+
"language": "JavaScript",
|
| 555 |
+
"lines": 44,
|
| 556 |
+
"truncated": false,
|
| 557 |
+
"block": 19,
|
| 558 |
+
"row": 3730
|
| 559 |
+
},
|
| 560 |
+
{
|
| 561 |
+
"path": "documentation/doxygen_html/search/functions_7.js",
|
| 562 |
+
"sha256": "e4f88a367d151bb7dae3acad395a8256c375229388b7b6a4c4d30ff7c84b61eb",
|
| 563 |
+
"language": "JavaScript",
|
| 564 |
+
"lines": 20,
|
| 565 |
+
"truncated": false,
|
| 566 |
+
"block": 19,
|
| 567 |
+
"row": 3740
|
| 568 |
+
},
|
| 569 |
+
{
|
| 570 |
+
"path": "documentation/doxygen_html/search/functions_8.js",
|
| 571 |
+
"sha256": "db946c5fe15e3b1b1610086a6b79927b0ca271a61063e93dfb773c2ea37be8a5",
|
| 572 |
+
"language": "JavaScript",
|
| 573 |
+
"lines": 4,
|
| 574 |
+
"truncated": false,
|
| 575 |
+
"block": 19,
|
| 576 |
+
"row": 3651
|
| 577 |
+
},
|
| 578 |
+
{
|
| 579 |
+
"path": "documentation/doxygen_html/search/functions_9.js",
|
| 580 |
+
"sha256": "82a502bafbb22def86294b8ce449586d4e654ce8635f499dd5507d4a41d98abe",
|
| 581 |
+
"language": "JavaScript",
|
| 582 |
+
"lines": 4,
|
| 583 |
+
"truncated": false,
|
| 584 |
+
"block": 19,
|
| 585 |
+
"row": 3609
|
| 586 |
+
},
|
| 587 |
+
{
|
| 588 |
+
"path": "documentation/doxygen_html/search/functions_a.js",
|
| 589 |
+
"sha256": "08870a4978e682c028957affd5389c38aa4504f7bd87958f76aeb18e9414ad3f",
|
| 590 |
+
"language": "JavaScript",
|
| 591 |
+
"lines": 7,
|
| 592 |
+
"truncated": false,
|
| 593 |
+
"block": 19,
|
| 594 |
+
"row": 3682
|
| 595 |
+
},
|
| 596 |
+
{
|
| 597 |
+
"path": "documentation/doxygen_html/search/functions_b.js",
|
| 598 |
+
"sha256": "ea97f8589054287de664a2a256b5965774a308515b55f2685f45c0899c5a838f",
|
| 599 |
+
"language": "JavaScript",
|
| 600 |
+
"lines": 7,
|
| 601 |
+
"truncated": false,
|
| 602 |
+
"block": 19,
|
| 603 |
+
"row": 3668
|
| 604 |
+
},
|
| 605 |
+
{
|
| 606 |
+
"path": "documentation/doxygen_html/search/functions_c.js",
|
| 607 |
+
"sha256": "bebd6dea691f092a145581ad9e3b52499ac50aaa59fd0a8b490e324b7582168d",
|
| 608 |
+
"language": "JavaScript",
|
| 609 |
+
"lines": 72,
|
| 610 |
+
"truncated": false,
|
| 611 |
+
"block": 19,
|
| 612 |
+
"row": 3733
|
| 613 |
+
},
|
| 614 |
+
{
|
| 615 |
+
"path": "documentation/doxygen_html/search/functions_d.js",
|
| 616 |
+
"sha256": "192c00d809316f55e0fc6171e93f1a672f8e671dcf47fd80c29b61b7941447fa",
|
| 617 |
+
"language": "JavaScript",
|
| 618 |
+
"lines": 6,
|
| 619 |
+
"truncated": false,
|
| 620 |
+
"block": 19,
|
| 621 |
+
"row": 3702
|
| 622 |
+
},
|
| 623 |
+
{
|
| 624 |
+
"path": "documentation/doxygen_html/search/functions_e.js",
|
| 625 |
+
"sha256": "056f75a310e3e6b317e8cc9358c63980f26724e0af0aaa731022e60b920ddadf",
|
| 626 |
+
"language": "JavaScript",
|
| 627 |
+
"lines": 11,
|
| 628 |
+
"truncated": false,
|
| 629 |
+
"block": 19,
|
| 630 |
+
"row": 3713
|
| 631 |
+
},
|
| 632 |
+
{
|
| 633 |
+
"path": "documentation/doxygen_html/search/functions_f.js",
|
| 634 |
+
"sha256": "18c813b3df6dfdfdb8012895f4cd45ced0367274ab7cb16aeb5001734a92a4d5",
|
| 635 |
+
"language": "JavaScript",
|
| 636 |
+
"lines": 5,
|
| 637 |
+
"truncated": false,
|
| 638 |
+
"block": 19,
|
| 639 |
+
"row": 3645
|
| 640 |
+
},
|
| 641 |
+
{
|
| 642 |
+
"path": "documentation/doxygen_html/search/pages_0.js",
|
| 643 |
+
"sha256": "c150725e0de841500f61a7d238cb2d83a491a1f334db73b8363f21f14fc2ea69",
|
| 644 |
+
"language": "JavaScript",
|
| 645 |
+
"lines": 4,
|
| 646 |
+
"truncated": false,
|
| 647 |
+
"block": 19,
|
| 648 |
+
"row": 3614
|
| 649 |
+
},
|
| 650 |
+
{
|
| 651 |
+
"path": "documentation/doxygen_html/search/search.js",
|
| 652 |
+
"sha256": "5b268e2d46fded5f4e880fa9efe0eba2a98c1092e27d9db8e0647bf4073773a1",
|
| 653 |
+
"language": "JavaScript",
|
| 654 |
+
"lines": 803,
|
| 655 |
+
"truncated": false,
|
| 656 |
+
"block": 19,
|
| 657 |
+
"row": 3735
|
| 658 |
+
},
|
| 659 |
+
{
|
| 660 |
+
"path": "documentation/doxygen_html/search/typedefs_0.js",
|
| 661 |
+
"sha256": "faf66b3b756fa2c905795cee595aec54783ba20cb6b816b82b647e917f58f06d",
|
| 662 |
+
"language": "JavaScript",
|
| 663 |
+
"lines": 4,
|
| 664 |
+
"truncated": false,
|
| 665 |
+
"block": 19,
|
| 666 |
+
"row": 3639
|
| 667 |
+
},
|
| 668 |
+
{
|
| 669 |
+
"path": "documentation/doxygen_html/search/typedefs_1.js",
|
| 670 |
+
"sha256": "a87cad271ca61fc3729d1a24a8aa6bc4c1a1b2f716a3101f04d10ad6db3c0bae",
|
| 671 |
+
"language": "JavaScript",
|
| 672 |
+
"lines": 9,
|
| 673 |
+
"truncated": false,
|
| 674 |
+
"block": 19,
|
| 675 |
+
"row": 3695
|
| 676 |
+
},
|
| 677 |
+
{
|
| 678 |
+
"path": "documentation/doxygen_html/search/typedefs_2.js",
|
| 679 |
+
"sha256": "de867bfef46afab54fb5518a97eedfe518daad8b9b8a55d753d459746c530b66",
|
| 680 |
+
"language": "JavaScript",
|
| 681 |
+
"lines": 4,
|
| 682 |
+
"truncated": false,
|
| 683 |
+
"block": 19,
|
| 684 |
+
"row": 3659
|
| 685 |
+
},
|
| 686 |
+
{
|
| 687 |
+
"path": "documentation/doxygen_html/search/typedefs_3.js",
|
| 688 |
+
"sha256": "ebff286722ce79551e600dd233ab36550dfba366ef24020c575686f0aef41c6b",
|
| 689 |
+
"language": "JavaScript",
|
| 690 |
+
"lines": 6,
|
| 691 |
+
"truncated": false,
|
| 692 |
+
"block": 19,
|
| 693 |
+
"row": 3671
|
| 694 |
+
},
|
| 695 |
+
{
|
| 696 |
+
"path": "documentation/doxygen_html/search/typedefs_4.js",
|
| 697 |
+
"sha256": "3df873ae205ca07a7898efaac1c8cf29c745f386b475bfbd83521421ff0614f5",
|
| 698 |
+
"language": "JavaScript",
|
| 699 |
+
"lines": 4,
|
| 700 |
+
"truncated": false,
|
| 701 |
+
"block": 19,
|
| 702 |
+
"row": 3624
|
| 703 |
+
},
|
| 704 |
+
{
|
| 705 |
+
"path": "documentation/doxygen_html/search/typedefs_5.js",
|
| 706 |
+
"sha256": "99b5924f2e2253bfd316988fe56057507a6df67362bbdeb755ff8b33b7c4f45e",
|
| 707 |
+
"language": "JavaScript",
|
| 708 |
+
"lines": 24,
|
| 709 |
+
"truncated": false,
|
| 710 |
+
"block": 19,
|
| 711 |
+
"row": 3727
|
| 712 |
+
},
|
| 713 |
+
{
|
| 714 |
+
"path": "documentation/doxygen_html/search/typedefs_6.js",
|
| 715 |
+
"sha256": "c290f4b95bdfa33aef7d5c82587a39598b5fcee69d2306ef02d969c5a1f860f5",
|
| 716 |
+
"language": "JavaScript",
|
| 717 |
+
"lines": 6,
|
| 718 |
+
"truncated": false,
|
| 719 |
+
"block": 19,
|
| 720 |
+
"row": 3674
|
| 721 |
+
},
|
| 722 |
+
{
|
| 723 |
+
"path": "documentation/doxygen_html/search/typedefs_7.js",
|
| 724 |
+
"sha256": "85969ba83f2d8128142a49b554210ff994129804f7d5e3e25adf17a27d951d9d",
|
| 725 |
+
"language": "JavaScript",
|
| 726 |
+
"lines": 4,
|
| 727 |
+
"truncated": false,
|
| 728 |
+
"block": 19,
|
| 729 |
+
"row": 3628
|
| 730 |
+
},
|
| 731 |
+
{
|
| 732 |
+
"path": "documentation/doxygen_html/search/typedefs_8.js",
|
| 733 |
+
"sha256": "745c1d2e67963820d20a7809fc0eb72ac75527dad3c52b1eed93ed18b4460c7c",
|
| 734 |
+
"language": "JavaScript",
|
| 735 |
+
"lines": 9,
|
| 736 |
+
"truncated": false,
|
| 737 |
+
"block": 19,
|
| 738 |
+
"row": 3705
|
| 739 |
+
},
|
| 740 |
+
{
|
| 741 |
+
"path": "documentation/doxygen_html/search/typedefs_9.js",
|
| 742 |
+
"sha256": "4dc41b6327268904e2fbfd9f0e326916af279473ac26391ff23f5b2431934417",
|
| 743 |
+
"language": "JavaScript",
|
| 744 |
+
"lines": 6,
|
| 745 |
+
"truncated": false,
|
| 746 |
+
"block": 19,
|
| 747 |
+
"row": 3696
|
| 748 |
+
},
|
| 749 |
+
{
|
| 750 |
+
"path": "documentation/doxygen_html/search/typedefs_a.js",
|
| 751 |
+
"sha256": "384b28ae470287f95b33302dc692485053cc068794b0fb47ac64bb33e20cc9d8",
|
| 752 |
+
"language": "JavaScript",
|
| 753 |
+
"lines": 7,
|
| 754 |
+
"truncated": false,
|
| 755 |
+
"block": 19,
|
| 756 |
+
"row": 3663
|
| 757 |
+
},
|
| 758 |
+
{
|
| 759 |
+
"path": "documentation/doxygen_html/search/typedefs_b.js",
|
| 760 |
+
"sha256": "8e8090a2ab16d6db2aa8e37488e2c63efeb4bea962913a4600f734317dff5553",
|
| 761 |
+
"language": "JavaScript",
|
| 762 |
+
"lines": 7,
|
| 763 |
+
"truncated": false,
|
| 764 |
+
"block": 19,
|
| 765 |
+
"row": 3720
|
| 766 |
+
},
|
| 767 |
+
{
|
| 768 |
+
"path": "documentation/doxygen_html/search/typedefs_c.js",
|
| 769 |
+
"sha256": "4aafc3ba2f53a69d04130206399141035c3379c54cf4cd5d3cc7323fbe4562ce",
|
| 770 |
+
"language": "JavaScript",
|
| 771 |
+
"lines": 7,
|
| 772 |
+
"truncated": false,
|
| 773 |
+
"block": 19,
|
| 774 |
+
"row": 3697
|
| 775 |
+
},
|
| 776 |
+
{
|
| 777 |
+
"path": "documentation/doxygen_html/search/typedefs_d.js",
|
| 778 |
+
"sha256": "46e298ca77921db871318fdd6156679a5e43dc95ece448249aa8837190ce8932",
|
| 779 |
+
"language": "JavaScript",
|
| 780 |
+
"lines": 5,
|
| 781 |
+
"truncated": false,
|
| 782 |
+
"block": 19,
|
| 783 |
+
"row": 3658
|
| 784 |
+
},
|
| 785 |
+
{
|
| 786 |
+
"path": "documentation/doxygen_html/search/variables_0.js",
|
| 787 |
+
"sha256": "be80fd544c9a3ae46843ca63f73d61fb6ed897842d7fdb85411ea549ab89c370",
|
| 788 |
+
"language": "JavaScript",
|
| 789 |
+
"lines": 14,
|
| 790 |
+
"truncated": false,
|
| 791 |
+
"block": 19,
|
| 792 |
+
"row": 3687
|
| 793 |
+
},
|
| 794 |
+
{
|
| 795 |
+
"path": "documentation/notebooks/brainHack.ipynb",
|
| 796 |
+
"sha256": "01aa677ff79719e46c7336f05e525b9900f7c3e89c98cfdd995636b3b6c573e2",
|
| 797 |
+
"language": "Jupyter",
|
| 798 |
+
"lines": 353,
|
| 799 |
+
"truncated": false,
|
| 800 |
+
"block": 19,
|
| 801 |
+
"row": 4037
|
| 802 |
+
},
|
| 803 |
+
{
|
| 804 |
+
"path": "examples/run_docker_jupyter.sh",
|
| 805 |
+
"sha256": "d68751d96ae1e11c885b99e7df0509eec61a95632d2b4b8d49320bc1aba9af60",
|
| 806 |
+
"language": "Shell",
|
| 807 |
+
"lines": 18,
|
| 808 |
+
"truncated": false,
|
| 809 |
+
"block": 19,
|
| 810 |
+
"row": 15358
|
| 811 |
+
},
|
| 812 |
+
{
|
| 813 |
+
"path": "get_version.py",
|
| 814 |
+
"sha256": "6bb8ea4e2c9eabaef1e4867a26eb993bfa6e6dcff387e6dcc97a36755e949c99",
|
| 815 |
+
"language": "Python",
|
| 816 |
+
"lines": 21,
|
| 817 |
+
"truncated": false,
|
| 818 |
+
"block": 19,
|
| 819 |
+
"row": 8897
|
| 820 |
+
},
|
| 821 |
+
{
|
| 822 |
+
"path": "notebooks/CorrectSliceIntensity.ipynb",
|
| 823 |
+
"sha256": "d1384cc9f8b32062d2743307184617c490790284dcd628fe0595f5d4c5025d91",
|
| 824 |
+
"language": "Jupyter",
|
| 825 |
+
"lines": 67,
|
| 826 |
+
"truncated": false,
|
| 827 |
+
"block": 19,
|
| 828 |
+
"row": 3822
|
| 829 |
+
},
|
| 830 |
+
{
|
| 831 |
+
"path": "notebooks/ImageReconstruction-dev.ipynb",
|
| 832 |
+
"sha256": "68b800af3fb8d9876a8f82952f9d1cdbe22074bec72ab3a9e12f89ae4ae7da98",
|
| 833 |
+
"language": "Jupyter",
|
| 834 |
+
"lines": 228,
|
| 835 |
+
"truncated": false,
|
| 836 |
+
"block": 19,
|
| 837 |
+
"row": 3948
|
| 838 |
+
},
|
| 839 |
+
{
|
| 840 |
+
"path": "notebooks/IntensityStandardization.ipynb",
|
| 841 |
+
"sha256": "3a05d75469813d38f76d68a5d2c5ab09c2d93271acd544a920b07f1736bb2fb3",
|
| 842 |
+
"language": "Jupyter",
|
| 843 |
+
"lines": 80,
|
| 844 |
+
"truncated": false,
|
| 845 |
+
"block": 19,
|
| 846 |
+
"row": 3829
|
| 847 |
+
},
|
| 848 |
+
{
|
| 849 |
+
"path": "notebooks/NiLearnPlotAnatSR.ipynb",
|
| 850 |
+
"sha256": "a5a431a5346a50f2d9087af149f9616bb0db0c8cbcccfaed95a87dd05086a5c9",
|
| 851 |
+
"language": "Jupyter",
|
| 852 |
+
"lines": 96,
|
| 853 |
+
"truncated": false,
|
| 854 |
+
"block": 19,
|
| 855 |
+
"row": 3826
|
| 856 |
+
},
|
| 857 |
+
{
|
| 858 |
+
"path": "notebooks/SliceBySliceN4BiasFieldCorrection.ipynb",
|
| 859 |
+
"sha256": "e128307b99a385123e845f6fc78b70d2ee5d046b8a5cac382bfe1fbe335d4a41",
|
| 860 |
+
"language": "Jupyter",
|
| 861 |
+
"lines": 67,
|
| 862 |
+
"truncated": false,
|
| 863 |
+
"block": 19,
|
| 864 |
+
"row": 3823
|
| 865 |
+
},
|
| 866 |
+
{
|
| 867 |
+
"path": "notebooks/StacksOrderSelection.ipynb",
|
| 868 |
+
"sha256": "e982e696fd48de2b5a30e86bc7325d30af4c77d9dcce71851853384bb01c7ec7",
|
| 869 |
+
"language": "Jupyter",
|
| 870 |
+
"lines": 104,
|
| 871 |
+
"truncated": false,
|
| 872 |
+
"block": 19,
|
| 873 |
+
"row": 3839
|
| 874 |
+
},
|
| 875 |
+
{
|
| 876 |
+
"path": "notebooks/SubjectReport.ipynb",
|
| 877 |
+
"sha256": "736500a340fbdae0df60c0e488ce8879686bd8e5ce322e95df769f83c49dfaed",
|
| 878 |
+
"language": "Jupyter",
|
| 879 |
+
"lines": 36,
|
| 880 |
+
"truncated": false,
|
| 881 |
+
"block": 19,
|
| 882 |
+
"row": 3785
|
| 883 |
+
},
|
| 884 |
+
{
|
| 885 |
+
"path": "notebooks/brainExtraction.ipynb",
|
| 886 |
+
"sha256": "fd2d8020032b21e31f7db0879cf28b7bf0be74b515e5443311f23182990f181a",
|
| 887 |
+
"language": "Jupyter",
|
| 888 |
+
"lines": 164,
|
| 889 |
+
"truncated": false,
|
| 890 |
+
"block": 19,
|
| 891 |
+
"row": 3921
|
| 892 |
+
},
|
| 893 |
+
{
|
| 894 |
+
"path": "notebooks/brainExtractionU-Net.ipynb",
|
| 895 |
+
"sha256": "35ee06f45b6a75899e168f51db632430cabcfbfc172d8b51327faf5b1e3cc71a",
|
| 896 |
+
"language": "Jupyter",
|
| 897 |
+
"lines": 153,
|
| 898 |
+
"truncated": false,
|
| 899 |
+
"block": 19,
|
| 900 |
+
"row": 3934
|
| 901 |
+
},
|
| 902 |
+
{
|
| 903 |
+
"path": "notebooks/brainHack.ipynb",
|
| 904 |
+
"sha256": "260faad1a045867599a5ef2040a2b94a0f881aaf4b17e7c5acbccf6ded64eb18",
|
| 905 |
+
"language": "Jupyter",
|
| 906 |
+
"lines": 347,
|
| 907 |
+
"truncated": false,
|
| 908 |
+
"block": 19,
|
| 909 |
+
"row": 4033
|
| 910 |
+
},
|
| 911 |
+
{
|
| 912 |
+
"path": "notebooks/histogramNormalization.ipynb",
|
| 913 |
+
"sha256": "e57d0a9f32e097e50e00a0a357a7462a9fe408a97bc2de28717213f19b11ef37",
|
| 914 |
+
"language": "Jupyter",
|
| 915 |
+
"lines": 160,
|
| 916 |
+
"truncated": false,
|
| 917 |
+
"block": 19,
|
| 918 |
+
"row": 3924
|
| 919 |
+
},
|
| 920 |
+
{
|
| 921 |
+
"path": "notebooks/optimize_tensorflow_checkpoint.ipynb",
|
| 922 |
+
"sha256": "b25a4ce89a73413ea526d70c81a49800762409c6cbcccc2e349b2284e5bde6bc",
|
| 923 |
+
"language": "Jupyter",
|
| 924 |
+
"lines": 795,
|
| 925 |
+
"truncated": false,
|
| 926 |
+
"block": 19,
|
| 927 |
+
"row": 4134
|
| 928 |
+
},
|
| 929 |
+
{
|
| 930 |
+
"path": "notebooks/orientImage.ipynb",
|
| 931 |
+
"sha256": "b9f498cd6af5a22e2f480b565d22caa295a57c7095d40f293261b4d734d75f50",
|
| 932 |
+
"language": "Jupyter",
|
| 933 |
+
"lines": 161,
|
| 934 |
+
"truncated": false,
|
| 935 |
+
"block": 19,
|
| 936 |
+
"row": 3920
|
| 937 |
+
},
|
| 938 |
+
{
|
| 939 |
+
"path": "notebooks/srr.ipynb",
|
| 940 |
+
"sha256": "a8b05db2c4014a393b2dc692d9b24430f3d878bc265b5266b554cc60c3235d86",
|
| 941 |
+
"language": "Jupyter",
|
| 942 |
+
"lines": 341,
|
| 943 |
+
"truncated": false,
|
| 944 |
+
"block": 19,
|
| 945 |
+
"row": 4066
|
| 946 |
+
},
|
| 947 |
+
{
|
| 948 |
+
"path": "notebooks/superResolution.ipynb",
|
| 949 |
+
"sha256": "8225803ca8dede11f478842d73173c71d076b5df37938d68259f23701a4f5dd0",
|
| 950 |
+
"language": "Jupyter",
|
| 951 |
+
"lines": 164,
|
| 952 |
+
"truncated": false,
|
| 953 |
+
"block": 19,
|
| 954 |
+
"row": 3932
|
| 955 |
+
},
|
| 956 |
+
{
|
| 957 |
+
"path": "pymialsrtk/bids/utils.py",
|
| 958 |
+
"sha256": "9e1273c2bf360d95e4919d96f883711c0eab2849d3c1be1a954d678e44ac43f6",
|
| 959 |
+
"language": "Python",
|
| 960 |
+
"lines": 105,
|
| 961 |
+
"truncated": false,
|
| 962 |
+
"block": 19,
|
| 963 |
+
"row": 10782
|
| 964 |
+
},
|
| 965 |
+
{
|
| 966 |
+
"path": "pymialsrtk/cli/__init__.py",
|
| 967 |
+
"sha256": "0ea732b68ec6646e9deceb028e0205324df5d1c962dcc2b096c78482e83d88fe",
|
| 968 |
+
"language": "Python",
|
| 969 |
+
"lines": 1,
|
| 970 |
+
"truncated": false,
|
| 971 |
+
"block": 19,
|
| 972 |
+
"row": 8537
|
| 973 |
+
},
|
| 974 |
+
{
|
| 975 |
+
"path": "pymialsrtk/cli/mialsuperresolutiontoolkit_docker.py",
|
| 976 |
+
"sha256": "5c1efeffa4e8d25c187fe9ac1e4e2e5f28ca35e5320b2219265f5d983614ad16",
|
| 977 |
+
"language": "Python",
|
| 978 |
+
"lines": 140,
|
| 979 |
+
"truncated": false,
|
| 980 |
+
"block": 19,
|
| 981 |
+
"row": 11899
|
| 982 |
+
},
|
| 983 |
+
{
|
| 984 |
+
"path": "pymialsrtk/cli/mialsuperresolutiontoolkit_singularity.py",
|
| 985 |
+
"sha256": "0f0bd5b424a8679590633ff8affc4f59bc46eb9053bc0b670f7ec16c72d7cb12",
|
| 986 |
+
"language": "Python",
|
| 987 |
+
"lines": 139,
|
| 988 |
+
"truncated": false,
|
| 989 |
+
"block": 19,
|
| 990 |
+
"row": 11916
|
| 991 |
+
},
|
| 992 |
+
{
|
| 993 |
+
"path": "pymialsrtk/info.py",
|
| 994 |
+
"sha256": "21c963f03664ff769e6b258dd9d406766093e8c9c1dfa317b8728049d5c611af",
|
| 995 |
+
"language": "Python",
|
| 996 |
+
"lines": 38,
|
| 997 |
+
"truncated": false,
|
| 998 |
+
"block": 19,
|
| 999 |
+
"row": 9420
|
| 1000 |
+
},
|
| 1001 |
+
{
|
| 1002 |
+
"path": "pymialsrtk/interfaces/postprocess.py",
|
| 1003 |
+
"sha256": "db55ee67986f7dbf5ec42d5f3aaf68f7d9c1b7b833cd7df340f25cd9f4a10e45",
|
| 1004 |
+
"language": "Python",
|
| 1005 |
+
"lines": 1348,
|
| 1006 |
+
"truncated": false,
|
| 1007 |
+
"block": 19,
|
| 1008 |
+
"row": 14541
|
| 1009 |
+
},
|
| 1010 |
+
{
|
| 1011 |
+
"path": "pymialsrtk/interfaces/preprocess.py",
|
| 1012 |
+
"sha256": "0c640b99c392964d385d23900f6288ddd676bb0240bed4bd76561d084a698d91",
|
| 1013 |
+
"language": "Python",
|
| 1014 |
+
"lines": 2712,
|
| 1015 |
+
"truncated": false,
|
| 1016 |
+
"block": 19,
|
| 1017 |
+
"row": 14626
|
| 1018 |
+
},
|
| 1019 |
+
{
|
| 1020 |
+
"path": "pymialsrtk/interfaces/reconstruction.py",
|
| 1021 |
+
"sha256": "827af2ae29b736cc155990dfb6f99b73b3d4c6969a8c0ee43e6e09b14dbcce62",
|
| 1022 |
+
"language": "Python",
|
| 1023 |
+
"lines": 754,
|
| 1024 |
+
"truncated": false,
|
| 1025 |
+
"block": 19,
|
| 1026 |
+
"row": 14332
|
| 1027 |
+
},
|
| 1028 |
+
{
|
| 1029 |
+
"path": "pymialsrtk/interfaces/utils.py",
|
| 1030 |
+
"sha256": "c1e3f07a89c83ffe139b0a76b87b3b995194880c469c9fa0ea90224198edbbfc",
|
| 1031 |
+
"language": "Python",
|
| 1032 |
+
"lines": 142,
|
| 1033 |
+
"truncated": false,
|
| 1034 |
+
"block": 19,
|
| 1035 |
+
"row": 11360
|
| 1036 |
+
},
|
| 1037 |
+
{
|
| 1038 |
+
"path": "pymialsrtk/parser.py",
|
| 1039 |
+
"sha256": "4b0ce70d109b4805f616a0eaf1bb26ef6aa5765efe3255f08e295b1612354220",
|
| 1040 |
+
"language": "Python",
|
| 1041 |
+
"lines": 152,
|
| 1042 |
+
"truncated": false,
|
| 1043 |
+
"block": 19,
|
| 1044 |
+
"row": 12010
|
| 1045 |
+
},
|
| 1046 |
+
{
|
| 1047 |
+
"path": "pymialsrtk/pipelines/anatomical/__init__.py",
|
| 1048 |
+
"sha256": "f441032f9bdf596e7b8d0f9198dcfbd5585a21a210eae91551e76b9aba17375f",
|
| 1049 |
+
"language": "Python",
|
| 1050 |
+
"lines": 5,
|
| 1051 |
+
"truncated": false,
|
| 1052 |
+
"block": 19,
|
| 1053 |
+
"row": 8584
|
| 1054 |
+
},
|
| 1055 |
+
{
|
| 1056 |
+
"path": "pymialsrtk/pipelines/anatomical/abstract.py",
|
| 1057 |
+
"sha256": "c007c44b6021b972ed40709327e29050597043e121f1886ed9cc4f9e9890b7ce",
|
| 1058 |
+
"language": "Python",
|
| 1059 |
+
"lines": 303,
|
| 1060 |
+
"truncated": false,
|
| 1061 |
+
"block": 19,
|
| 1062 |
+
"row": 13282
|
| 1063 |
+
},
|
| 1064 |
+
{
|
| 1065 |
+
"path": "pymialsrtk/pipelines/anatomical/preprocessing.py",
|
| 1066 |
+
"sha256": "f9b5ed290afe1519fd6b31cd405db5a0b1c003543273e5e011060c3844363579",
|
| 1067 |
+
"language": "Python",
|
| 1068 |
+
"lines": 391,
|
| 1069 |
+
"truncated": false,
|
| 1070 |
+
"block": 19,
|
| 1071 |
+
"row": 13587
|
| 1072 |
+
},
|
| 1073 |
+
{
|
| 1074 |
+
"path": "pymialsrtk/pipelines/anatomical/srr.py",
|
| 1075 |
+
"sha256": "b556eb31beabad1078c4df27b6b37583fb7008cf7392702b220c8a7296c88a48",
|
| 1076 |
+
"language": "Python",
|
| 1077 |
+
"lines": 686,
|
| 1078 |
+
"truncated": false,
|
| 1079 |
+
"block": 19,
|
| 1080 |
+
"row": 14256
|
| 1081 |
+
},
|
| 1082 |
+
{
|
| 1083 |
+
"path": "pymialsrtk/sphinxext/documenter.py",
|
| 1084 |
+
"sha256": "5858334de7d58dc1eabff1ee3df20fff63b641af0b6713ff542ad7097762b415",
|
| 1085 |
+
"language": "Python",
|
| 1086 |
+
"lines": 89,
|
| 1087 |
+
"truncated": false,
|
| 1088 |
+
"block": 19,
|
| 1089 |
+
"row": 10356
|
| 1090 |
+
},
|
| 1091 |
+
{
|
| 1092 |
+
"path": "pymialsrtk/sphinxext/gh.py",
|
| 1093 |
+
"sha256": "97aaf93bfc412fb0c4f2f0b4bbc45a5c3f94a5345ed82b1493a12619b4d0e125",
|
| 1094 |
+
"language": "Python",
|
| 1095 |
+
"lines": 32,
|
| 1096 |
+
"truncated": false,
|
| 1097 |
+
"block": 19,
|
| 1098 |
+
"row": 9346
|
| 1099 |
+
},
|
| 1100 |
+
{
|
| 1101 |
+
"path": "pymialsrtk/utils.py",
|
| 1102 |
+
"sha256": "f7dd8b659568a4e78e412cb9f95e74af134448c9f5963f97b1a750f30c698781",
|
| 1103 |
+
"language": "Python",
|
| 1104 |
+
"lines": 4,
|
| 1105 |
+
"truncated": false,
|
| 1106 |
+
"block": 19,
|
| 1107 |
+
"row": 8563
|
| 1108 |
+
},
|
| 1109 |
+
{
|
| 1110 |
+
"path": "pymialsrtk/workflows/input_stage.py",
|
| 1111 |
+
"sha256": "554fca2e05f2e60285f883220b956f75b46cfd610e56a4fb9b6a56bc328297ea",
|
| 1112 |
+
"language": "Python",
|
| 1113 |
+
"lines": 303,
|
| 1114 |
+
"truncated": false,
|
| 1115 |
+
"block": 19,
|
| 1116 |
+
"row": 13138
|
| 1117 |
+
},
|
| 1118 |
+
{
|
| 1119 |
+
"path": "pymialsrtk/workflows/output_stage.py",
|
| 1120 |
+
"sha256": "fb4e8607b172e56998b24bd351adc73335b1abac7a9127ae0d696a2fd8b5c316",
|
| 1121 |
+
"language": "Python",
|
| 1122 |
+
"lines": 407,
|
| 1123 |
+
"truncated": false,
|
| 1124 |
+
"block": 19,
|
| 1125 |
+
"row": 13809
|
| 1126 |
+
},
|
| 1127 |
+
{
|
| 1128 |
+
"path": "pymialsrtk/workflows/postproc_stage.py",
|
| 1129 |
+
"sha256": "06333cb0ee1a2a31dcaaf190789a3cf6412ac3add0dd79a09b9bc72dd2e0e502",
|
| 1130 |
+
"language": "Python",
|
| 1131 |
+
"lines": 299,
|
| 1132 |
+
"truncated": false,
|
| 1133 |
+
"block": 19,
|
| 1134 |
+
"row": 12979
|
| 1135 |
+
},
|
| 1136 |
+
{
|
| 1137 |
+
"path": "pymialsrtk/workflows/preproc_stage.py",
|
| 1138 |
+
"sha256": "8147efbacfdcc1f20d540b02aaacd8e3344715e6a79362d70523c456db6a0158",
|
| 1139 |
+
"language": "Python",
|
| 1140 |
+
"lines": 432,
|
| 1141 |
+
"truncated": false,
|
| 1142 |
+
"block": 19,
|
| 1143 |
+
"row": 13720
|
| 1144 |
+
},
|
| 1145 |
+
{
|
| 1146 |
+
"path": "pymialsrtk/workflows/recon_labelmap_stage.py",
|
| 1147 |
+
"sha256": "e1854633facd003dd1429523f4cd62b743d30084e3da89a69136ccb495a6d552",
|
| 1148 |
+
"language": "Python",
|
| 1149 |
+
"lines": 206,
|
| 1150 |
+
"truncated": false,
|
| 1151 |
+
"block": 19,
|
| 1152 |
+
"row": 12302
|
| 1153 |
+
},
|
| 1154 |
+
{
|
| 1155 |
+
"path": "pymialsrtk/workflows/recon_stage.py",
|
| 1156 |
+
"sha256": "eece03ff94c6a0173b39dfeccaa7949432679960f875942738d3fc9ed8c2418b",
|
| 1157 |
+
"language": "Python",
|
| 1158 |
+
"lines": 452,
|
| 1159 |
+
"truncated": false,
|
| 1160 |
+
"block": 19,
|
| 1161 |
+
"row": 13724
|
| 1162 |
+
},
|
| 1163 |
+
{
|
| 1164 |
+
"path": "pymialsrtk/workflows/registration_stage.py",
|
| 1165 |
+
"sha256": "929825cc64493ed91775cbd8416d43f41172fb23b696f06aa3426bc5ddc3177a",
|
| 1166 |
+
"language": "Python",
|
| 1167 |
+
"lines": 171,
|
| 1168 |
+
"truncated": false,
|
| 1169 |
+
"block": 19,
|
| 1170 |
+
"row": 12038
|
| 1171 |
+
},
|
| 1172 |
+
{
|
| 1173 |
+
"path": "pymialsrtk/workflows/srr_assessment_stage.py",
|
| 1174 |
+
"sha256": "092257b30f31a36c9be4eaa79d672f2ab732d79e11a93ac4500fbcb1751e80e0",
|
| 1175 |
+
"language": "Python",
|
| 1176 |
+
"lines": 300,
|
| 1177 |
+
"truncated": false,
|
| 1178 |
+
"block": 19,
|
| 1179 |
+
"row": 13163
|
| 1180 |
+
},
|
| 1181 |
+
{
|
| 1182 |
+
"path": "scripts/build_bidsapp.sh",
|
| 1183 |
+
"sha256": "b7df3cedefe3a2c9e3f2d9512aeb2ac99aa278700da1cdefeef69e2ea2cbc888",
|
| 1184 |
+
"language": "Shell",
|
| 1185 |
+
"lines": 28,
|
| 1186 |
+
"truncated": false,
|
| 1187 |
+
"block": 19,
|
| 1188 |
+
"row": 15490
|
| 1189 |
+
},
|
| 1190 |
+
{
|
| 1191 |
+
"path": "scripts/build_jupyter.sh",
|
| 1192 |
+
"sha256": "31bfde6adbfab91d39376cacd62a9ca62d3e6a7fc1be9e73739848bb1c0eee7b",
|
| 1193 |
+
"language": "Shell",
|
| 1194 |
+
"lines": 29,
|
| 1195 |
+
"truncated": false,
|
| 1196 |
+
"block": 19,
|
| 1197 |
+
"row": 15521
|
| 1198 |
+
},
|
| 1199 |
+
{
|
| 1200 |
+
"path": "scripts/build_sphinx_docs.sh",
|
| 1201 |
+
"sha256": "9591202fe3a340878459773e042bd83aebc793a632d5aecd2645e26a285f1f2f",
|
| 1202 |
+
"language": "Shell",
|
| 1203 |
+
"lines": 10,
|
| 1204 |
+
"truncated": false,
|
| 1205 |
+
"block": 19,
|
| 1206 |
+
"row": 15273
|
| 1207 |
+
},
|
| 1208 |
+
{
|
| 1209 |
+
"path": "scripts/test_bidsapp.sh",
|
| 1210 |
+
"sha256": "a87ee361215ffca0ba859bd3667a046a55eb8ed7610d0909c69d88b6e772dd04",
|
| 1211 |
+
"language": "Shell",
|
| 1212 |
+
"lines": 15,
|
| 1213 |
+
"truncated": false,
|
| 1214 |
+
"block": 19,
|
| 1215 |
+
"row": 15405
|
| 1216 |
+
},
|
| 1217 |
+
{
|
| 1218 |
+
"path": "scripts/test_bidsapp_docker_wrapper.sh",
|
| 1219 |
+
"sha256": "665f19ad9a5d04ef73ebd1e986e1d48d39366fe11d7694f2dcb0711803c6433b",
|
| 1220 |
+
"language": "Shell",
|
| 1221 |
+
"lines": 12,
|
| 1222 |
+
"truncated": false,
|
| 1223 |
+
"block": 19,
|
| 1224 |
+
"row": 15333
|
| 1225 |
+
},
|
| 1226 |
+
{
|
| 1227 |
+
"path": "setup.py",
|
| 1228 |
+
"sha256": "75854f6a94bfe63d2410c37ab04230bc797e4998c2e163641d5f26a571f5987a",
|
| 1229 |
+
"language": "Python",
|
| 1230 |
+
"lines": 136,
|
| 1231 |
+
"truncated": false,
|
| 1232 |
+
"block": 19,
|
| 1233 |
+
"row": 11876
|
| 1234 |
+
},
|
| 1235 |
+
{
|
| 1236 |
+
"path": "setup_pypi.py",
|
| 1237 |
+
"sha256": "656ade9d72fb628e7cf7f452ca40e6163773c13fc9b069b2ca13b715fd39423a",
|
| 1238 |
+
"language": "Python",
|
| 1239 |
+
"lines": 136,
|
| 1240 |
+
"truncated": false,
|
| 1241 |
+
"block": 19,
|
| 1242 |
+
"row": 11757
|
| 1243 |
+
},
|
| 1244 |
+
{
|
| 1245 |
+
"path": "src/BrainLocalizationExtraction/brainExtractionTwoSteps.py",
|
| 1246 |
+
"sha256": "83657da164faad54fd876c82d6afef06419c5dd4bca728c7d25a64ac9bd27161",
|
| 1247 |
+
"language": "Python",
|
| 1248 |
+
"lines": 514,
|
| 1249 |
+
"truncated": false,
|
| 1250 |
+
"block": 19,
|
| 1251 |
+
"row": 14236
|
| 1252 |
+
},
|
| 1253 |
+
{
|
| 1254 |
+
"path": "src/BrainLocalizationExtraction/mialsrtkFetalBrainExtractionGUI.py",
|
| 1255 |
+
"sha256": "fae8e0d0183db4820e9ea96afd78c360423f4730b1afa4021f3dc8efb16441e8",
|
| 1256 |
+
"language": "Python",
|
| 1257 |
+
"lines": 674,
|
| 1258 |
+
"truncated": false,
|
| 1259 |
+
"block": 19,
|
| 1260 |
+
"row": 14487
|
| 1261 |
+
},
|
| 1262 |
+
{
|
| 1263 |
+
"path": "src/BrainLocalizationExtraction/mialsrtkSegmentationWeightedFusion.h",
|
| 1264 |
+
"sha256": "64ce936ec516ee2920d6d9e597bbbdd0f9660d6b73a097df44c0cafa71058505",
|
| 1265 |
+
"language": "C/C++",
|
| 1266 |
+
"lines": 150,
|
| 1267 |
+
"truncated": false,
|
| 1268 |
+
"block": 19,
|
| 1269 |
+
"row": 2215
|
| 1270 |
+
},
|
| 1271 |
+
{
|
| 1272 |
+
"path": "src/BrainLocalizationExtraction/mialsrtkSegmentationWeightedFusionWithUnanimousConsensus.h",
|
| 1273 |
+
"sha256": "bbe3a51dc007145c5d39ca9ff1c62a3ff3e8129c7dcc4d8a701b9ab29129dced",
|
| 1274 |
+
"language": "C/C++",
|
| 1275 |
+
"lines": 152,
|
| 1276 |
+
"truncated": false,
|
| 1277 |
+
"block": 19,
|
| 1278 |
+
"row": 2240
|
| 1279 |
+
},
|
| 1280 |
+
{
|
| 1281 |
+
"path": "src/Code/BTK/btkBoxCarPSF.h",
|
| 1282 |
+
"sha256": "3efe9d12e2e0ab52bac21d05b774d4204d45df756a75bc6627e6e4dadab5bee4",
|
| 1283 |
+
"language": "C/C++",
|
| 1284 |
+
"lines": 113,
|
| 1285 |
+
"truncated": false,
|
| 1286 |
+
"block": 19,
|
| 1287 |
+
"row": 2015
|
| 1288 |
+
},
|
| 1289 |
+
{
|
| 1290 |
+
"path": "src/Code/BTK/btkCommandIterationUpdate.h",
|
| 1291 |
+
"sha256": "47754714df9d320fc0f702d88ca78424436377335f4ce766e22b2a4ed54861e9",
|
| 1292 |
+
"language": "C/C++",
|
| 1293 |
+
"lines": 85,
|
| 1294 |
+
"truncated": false,
|
| 1295 |
+
"block": 19,
|
| 1296 |
+
"row": 1829
|
| 1297 |
+
},
|
| 1298 |
+
{
|
| 1299 |
+
"path": "src/Code/BTK/btkCommandProgressUpdate.h",
|
| 1300 |
+
"sha256": "0e8e62d96ffdd4d66235c7ac6199f02bf407c552c6a9afe5232fa74071875f3c",
|
| 1301 |
+
"language": "C/C++",
|
| 1302 |
+
"lines": 101,
|
| 1303 |
+
"truncated": false,
|
| 1304 |
+
"block": 19,
|
| 1305 |
+
"row": 1873
|
| 1306 |
+
},
|
| 1307 |
+
{
|
| 1308 |
+
"path": "src/Code/BTK/btkCropImageUsingMaskFilter.h",
|
| 1309 |
+
"sha256": "1ed3609006c782e6ca5ad8132fbfec86db4a4b90184c0ce0070c4e111fe6463f",
|
| 1310 |
+
"language": "C/C++",
|
| 1311 |
+
"lines": 113,
|
| 1312 |
+
"truncated": false,
|
| 1313 |
+
"block": 19,
|
| 1314 |
+
"row": 1925
|
| 1315 |
+
},
|
| 1316 |
+
{
|
| 1317 |
+
"path": "src/Code/BTK/btkFileHelper.h",
|
| 1318 |
+
"sha256": "d86364cd96b5e0c91c9d7bfa5dc5878d9065a26e00550fcbcd8ce80352cd9314",
|
| 1319 |
+
"language": "C/C++",
|
| 1320 |
+
"lines": 116,
|
| 1321 |
+
"truncated": false,
|
| 1322 |
+
"block": 19,
|
| 1323 |
+
"row": 1966
|
| 1324 |
+
},
|
| 1325 |
+
{
|
| 1326 |
+
"path": "src/Code/BTK/btkGaussianPSF.h",
|
| 1327 |
+
"sha256": "baa9faddf125cf4723197aef79654c6e614b78f7ba2c328d2617a9063f89f555",
|
| 1328 |
+
"language": "C/C++",
|
| 1329 |
+
"lines": 140,
|
| 1330 |
+
"truncated": false,
|
| 1331 |
+
"block": 19,
|
| 1332 |
+
"row": 2075
|
| 1333 |
+
},
|
| 1334 |
+
{
|
| 1335 |
+
"path": "src/Code/BTK/btkGradientDirection.h",
|
| 1336 |
+
"sha256": "48d24a9a68888ea139e4c2bc7508d061707b94483a0d2113acf15f289ae80089",
|
| 1337 |
+
"language": "C/C++",
|
| 1338 |
+
"lines": 120,
|
| 1339 |
+
"truncated": false,
|
| 1340 |
+
"block": 19,
|
| 1341 |
+
"row": 1972
|
| 1342 |
+
},
|
| 1343 |
+
{
|
| 1344 |
+
"path": "src/Code/BTK/btkIOImageHelper.h",
|
| 1345 |
+
"sha256": "79e14753d10e25e957cfcae80529e0cef482db94facb6bea631c777bdab373ff",
|
| 1346 |
+
"language": "C/C++",
|
| 1347 |
+
"lines": 91,
|
| 1348 |
+
"truncated": false,
|
| 1349 |
+
"block": 19,
|
| 1350 |
+
"row": 1726
|
| 1351 |
+
},
|
| 1352 |
+
{
|
| 1353 |
+
"path": "src/Code/BTK/btkImageHelper.h",
|
| 1354 |
+
"sha256": "8a82f018a7af374894ddbe5f489d478f69f9e4116bd6b80ef088bc4243315245",
|
| 1355 |
+
"language": "C/C++",
|
| 1356 |
+
"lines": 212,
|
| 1357 |
+
"truncated": false,
|
| 1358 |
+
"block": 19,
|
| 1359 |
+
"row": 2483
|
| 1360 |
+
},
|
| 1361 |
+
{
|
| 1362 |
+
"path": "src/Code/BTK/btkLinearInterpolateImageFunctionWithWeights.h",
|
| 1363 |
+
"sha256": "34798639e1c4ed12d3a678c2209a21f92ce138ee90dabc5c7f599839038e6bdc",
|
| 1364 |
+
"language": "C/C++",
|
| 1365 |
+
"lines": 170,
|
| 1366 |
+
"truncated": false,
|
| 1367 |
+
"block": 19,
|
| 1368 |
+
"row": 2218
|
| 1369 |
+
},
|
| 1370 |
+
{
|
| 1371 |
+
"path": "src/Code/BTK/btkMacro.h",
|
| 1372 |
+
"sha256": "d5befdf993b57f486e1104ed9fa3ad66fd7cadd67710aa93ffc22f116d141046",
|
| 1373 |
+
"language": "C/C++",
|
| 1374 |
+
"lines": 334,
|
| 1375 |
+
"truncated": false,
|
| 1376 |
+
"block": 19,
|
| 1377 |
+
"row": 2646
|
| 1378 |
+
},
|
| 1379 |
+
{
|
| 1380 |
+
"path": "src/Code/BTK/btkNLMTool.h",
|
| 1381 |
+
"sha256": "1bb4c4fd125b1657e23d7590f3c4387775a0da9c276beb57af96e1187dbe1e50",
|
| 1382 |
+
"language": "C/C++",
|
| 1383 |
+
"lines": 294,
|
| 1384 |
+
"truncated": false,
|
| 1385 |
+
"block": 19,
|
| 1386 |
+
"row": 2405
|
| 1387 |
+
},
|
| 1388 |
+
{
|
| 1389 |
+
"path": "src/Code/BTK/btkPSF.h",
|
| 1390 |
+
"sha256": "aed69ec4f234c3c6106015f1b385081f32befa296ee71e263a19d38d520c9db1",
|
| 1391 |
+
"language": "C/C++",
|
| 1392 |
+
"lines": 206,
|
| 1393 |
+
"truncated": false,
|
| 1394 |
+
"block": 19,
|
| 1395 |
+
"row": 2241
|
| 1396 |
+
},
|
| 1397 |
+
{
|
| 1398 |
+
"path": "src/Code/BTK/btkResampleImagesToBiggestImageFilter.h",
|
| 1399 |
+
"sha256": "f9c107a9ff00b1c2526ef6a3133876721b9a096ef31000ce81e79309005bd369",
|
| 1400 |
+
"language": "C/C++",
|
| 1401 |
+
"lines": 124,
|
| 1402 |
+
"truncated": false,
|
| 1403 |
+
"block": 19,
|
| 1404 |
+
"row": 1994
|
| 1405 |
+
},
|
| 1406 |
+
{
|
| 1407 |
+
"path": "src/Code/BTK/btkSphericalDirection.h",
|
| 1408 |
+
"sha256": "8631419e95033c1ca7ac15e02c301d15fcd115b168ae687b9fb1688b13a9caad",
|
| 1409 |
+
"language": "C/C++",
|
| 1410 |
+
"lines": 73,
|
| 1411 |
+
"truncated": false,
|
| 1412 |
+
"block": 19,
|
| 1413 |
+
"row": 1654
|
| 1414 |
+
},
|
| 1415 |
+
{
|
| 1416 |
+
"path": "src/Code/BTK/btkUserMacro.h",
|
| 1417 |
+
"sha256": "122d9fa6fda9faabbd732f76c067ad6f6e348635e19e63f6da662905800ca4cb",
|
| 1418 |
+
"language": "C/C++",
|
| 1419 |
+
"lines": 131,
|
| 1420 |
+
"truncated": false,
|
| 1421 |
+
"block": 19,
|
| 1422 |
+
"row": 2058
|
| 1423 |
+
},
|
| 1424 |
+
{
|
| 1425 |
+
"path": "src/Code/BTK/btkWeightedSumOfImagesFilter.h",
|
| 1426 |
+
"sha256": "b81b25a38fec827dda90b0248092ea6cc637ca6ccf326836249ed16d13813cc5",
|
| 1427 |
+
"language": "C/C++",
|
| 1428 |
+
"lines": 108,
|
| 1429 |
+
"truncated": false,
|
| 1430 |
+
"block": 19,
|
| 1431 |
+
"row": 1869
|
| 1432 |
+
},
|
| 1433 |
+
{
|
| 1434 |
+
"path": "src/Code/CRKit/crlMSTAPLEImageFilter.h",
|
| 1435 |
+
"sha256": "0db15e7c197026d83f635f4ca8374a6eef3920758026c5133d6bccede83964d1",
|
| 1436 |
+
"language": "C/C++",
|
| 1437 |
+
"lines": 358,
|
| 1438 |
+
"truncated": false,
|
| 1439 |
+
"block": 19,
|
| 1440 |
+
"row": 2635
|
| 1441 |
+
},
|
| 1442 |
+
{
|
| 1443 |
+
"path": "src/Code/Maths/ComputeNormalizedCrossCorrelationImageFilter.h",
|
| 1444 |
+
"sha256": "8ff8252531c4ab65da0b2f32351b83cb9d05b58a84f0bfa092403a34bbc188f7",
|
| 1445 |
+
"language": "C/C++",
|
| 1446 |
+
"lines": 151,
|
| 1447 |
+
"truncated": false,
|
| 1448 |
+
"block": 19,
|
| 1449 |
+
"row": 2087
|
| 1450 |
+
},
|
| 1451 |
+
{
|
| 1452 |
+
"path": "src/Code/Maths/itkFFTPadImageFilter.h",
|
| 1453 |
+
"sha256": "86abd73b7074bbcd87955259985cf3a3be6be4fa9dbfd4a40024f0d2d6061c4c",
|
| 1454 |
+
"language": "C/C++",
|
| 1455 |
+
"lines": 232,
|
| 1456 |
+
"truncated": false,
|
| 1457 |
+
"block": 19,
|
| 1458 |
+
"row": 2325
|
| 1459 |
+
},
|
| 1460 |
+
{
|
| 1461 |
+
"path": "src/Code/Maths/mialsrtkMaths.h",
|
| 1462 |
+
"sha256": "0e9a9123f7b813d281c555261c90f916dcd8dfa5785ec1d4120b02b96131501c",
|
| 1463 |
+
"language": "C/C++",
|
| 1464 |
+
"lines": 639,
|
| 1465 |
+
"truncated": false,
|
| 1466 |
+
"block": 19,
|
| 1467 |
+
"row": 2743
|
| 1468 |
+
},
|
| 1469 |
+
{
|
| 1470 |
+
"path": "src/Code/Maths/vnl_index_sort.h",
|
| 1471 |
+
"sha256": "c74734c8bc84f053445c9520a713453fbe6f3117d185c8678a6d5c3cd641b623",
|
| 1472 |
+
"language": "C/C++",
|
| 1473 |
+
"lines": 176,
|
| 1474 |
+
"truncated": false,
|
| 1475 |
+
"block": 19,
|
| 1476 |
+
"row": 2002
|
| 1477 |
+
},
|
| 1478 |
+
{
|
| 1479 |
+
"path": "src/Code/Reconstruction/mialsrtkImageIntersectionCalculator.h",
|
| 1480 |
+
"sha256": "bbcdcc5be1f204804b6aeae508716e55c4c6ed12c69efd56ec96342f8194fda9",
|
| 1481 |
+
"language": "C/C++",
|
| 1482 |
+
"lines": 127,
|
| 1483 |
+
"truncated": false,
|
| 1484 |
+
"block": 19,
|
| 1485 |
+
"row": 2000
|
| 1486 |
+
},
|
| 1487 |
+
{
|
| 1488 |
+
"path": "src/Code/Reconstruction/mialsrtkJointRobustTVGMMCostFunctionWithImplicitGradientDescent.h",
|
| 1489 |
+
"sha256": "fe5279c718b9478d3bd7bc29342cc4a3eef56872d6cb928b00f5f88fb345a103",
|
| 1490 |
+
"language": "C/C++",
|
| 1491 |
+
"lines": 408,
|
| 1492 |
+
"truncated": false,
|
| 1493 |
+
"block": 19,
|
| 1494 |
+
"row": 2595
|
| 1495 |
+
},
|
| 1496 |
+
{
|
| 1497 |
+
"path": "src/Code/Reconstruction/mialsrtkLowToHighImageResolutionMethod.h",
|
| 1498 |
+
"sha256": "b5ca4883d09d297b382444394ebb498d6c6695823de5fa2774e49df96efcdb0f",
|
| 1499 |
+
"language": "C/C++",
|
| 1500 |
+
"lines": 292,
|
| 1501 |
+
"truncated": false,
|
| 1502 |
+
"block": 19,
|
| 1503 |
+
"row": 2520
|
| 1504 |
+
},
|
| 1505 |
+
{
|
| 1506 |
+
"path": "src/Code/Reconstruction/mialsrtkOrientedSpatialFunction.h",
|
| 1507 |
+
"sha256": "df8e13f6d75ec9984219100217640c32a37fc4dbb380d1c859c59c8023493668",
|
| 1508 |
+
"language": "C/C++",
|
| 1509 |
+
"lines": 238,
|
| 1510 |
+
"truncated": false,
|
| 1511 |
+
"block": 19,
|
| 1512 |
+
"row": 2278
|
| 1513 |
+
},
|
| 1514 |
+
{
|
| 1515 |
+
"path": "src/Code/Reconstruction/mialsrtkResampleImageByInjectionFilter.h",
|
| 1516 |
+
"sha256": "5940137c239e59560ac5fb29486b053ac0215e9856a6fc68634f5a4bcd43e7cc",
|
| 1517 |
+
"language": "C/C++",
|
| 1518 |
+
"lines": 336,
|
| 1519 |
+
"truncated": false,
|
| 1520 |
+
"block": 19,
|
| 1521 |
+
"row": 2612
|
| 1522 |
+
},
|
| 1523 |
+
{
|
| 1524 |
+
"path": "src/Code/Reconstruction/mialsrtkRobustSuperResolutionRigidImageFilterWithGMM.h",
|
| 1525 |
+
"sha256": "9e2d78afd0f7a196520a65cfa299b325823be2533647a57f7268957608063e3d",
|
| 1526 |
+
"language": "C/C++",
|
| 1527 |
+
"lines": 540,
|
| 1528 |
+
"truncated": false,
|
| 1529 |
+
"block": 19,
|
| 1530 |
+
"row": 2829
|
| 1531 |
+
},
|
| 1532 |
+
{
|
| 1533 |
+
"path": "src/Code/Reconstruction/mialsrtkSuperResolutionRigidImageFilterWithImplicitGradientDescent.h",
|
| 1534 |
+
"sha256": "efe9d6d6f4febf99384e5a8ae2db4878cb3173cd4f4405892a80148cc2569aca",
|
| 1535 |
+
"language": "C/C++",
|
| 1536 |
+
"lines": 483,
|
| 1537 |
+
"truncated": false,
|
| 1538 |
+
"block": 19,
|
| 1539 |
+
"row": 2774
|
| 1540 |
+
},
|
| 1541 |
+
{
|
| 1542 |
+
"path": "src/Code/Reconstruction/mialsrtkTotalVariationCostFunctionWithImplicitGradientDescent.h",
|
| 1543 |
+
"sha256": "154670f6f982992b9f671679ffe88fed02df910018ae352f516949a8bf01b2bf",
|
| 1544 |
+
"language": "C/C++",
|
| 1545 |
+
"lines": 345,
|
| 1546 |
+
"truncated": false,
|
| 1547 |
+
"block": 19,
|
| 1548 |
+
"row": 2499
|
| 1549 |
+
},
|
| 1550 |
+
{
|
| 1551 |
+
"path": "src/Code/Registration/mialsrtkBSplineInterpolateImageFunction.h",
|
| 1552 |
+
"sha256": "a6545e3d57c6017bf75b6c5b02bbcf535791095ea3232e6fc5eabdf7f0b02171",
|
| 1553 |
+
"language": "C/C++",
|
| 1554 |
+
"lines": 429,
|
| 1555 |
+
"truncated": false,
|
| 1556 |
+
"block": 19,
|
| 1557 |
+
"row": 2807
|
| 1558 |
+
},
|
| 1559 |
+
{
|
| 1560 |
+
"path": "src/Code/Registration/mialsrtkBSplineResampleImageFunction.h",
|
| 1561 |
+
"sha256": "b918a103ab892e2d3fa4c788f0e92f9c60af0dde656cafea4a95b181bfc2c6e9",
|
| 1562 |
+
"language": "C/C++",
|
| 1563 |
+
"lines": 97,
|
| 1564 |
+
"truncated": false,
|
| 1565 |
+
"block": 19,
|
| 1566 |
+
"row": 1851
|
| 1567 |
+
},
|
| 1568 |
+
{
|
| 1569 |
+
"path": "src/Code/Registration/mialsrtkImageRegistrationFilter.h",
|
| 1570 |
+
"sha256": "10574f34ae5998b8ec6c01807fb08aca5d67d12bef6799de32534d58dc86a95a",
|
| 1571 |
+
"language": "C/C++",
|
| 1572 |
+
"lines": 208,
|
| 1573 |
+
"truncated": false,
|
| 1574 |
+
"block": 19,
|
| 1575 |
+
"row": 2392
|
| 1576 |
+
},
|
| 1577 |
+
{
|
| 1578 |
+
"path": "src/Code/Registration/mialsrtkRegistration.h",
|
| 1579 |
+
"sha256": "f507a04e40f39c6db19740fc9be71314ef1212300eaebd9349bc39fb92196729",
|
| 1580 |
+
"language": "C/C++",
|
| 1581 |
+
"lines": 253,
|
| 1582 |
+
"truncated": false,
|
| 1583 |
+
"block": 19,
|
| 1584 |
+
"row": 2448
|
| 1585 |
+
},
|
| 1586 |
+
{
|
| 1587 |
+
"path": "src/Code/Registration/mialsrtkRigidRegistration.h",
|
| 1588 |
+
"sha256": "7aea42c9bc5afbba90b3a934d17214e56be8e966f171d17c2b892c4584105b26",
|
| 1589 |
+
"language": "C/C++",
|
| 1590 |
+
"lines": 234,
|
| 1591 |
+
"truncated": false,
|
| 1592 |
+
"block": 19,
|
| 1593 |
+
"row": 2397
|
| 1594 |
+
},
|
| 1595 |
+
{
|
| 1596 |
+
"path": "src/Code/Registration/mialsrtkSliceBySliceRigidRegistration.h",
|
| 1597 |
+
"sha256": "1f0d6c707a9e4e1998abcd493dd8e8a6eef031df48aec93c556796dba406e072",
|
| 1598 |
+
"language": "C/C++",
|
| 1599 |
+
"lines": 250,
|
| 1600 |
+
"truncated": false,
|
| 1601 |
+
"block": 19,
|
| 1602 |
+
"row": 2455
|
| 1603 |
+
},
|
| 1604 |
+
{
|
| 1605 |
+
"path": "src/Code/Timer/mialsrtkTimeHelper.h",
|
| 1606 |
+
"sha256": "c79d864b2b964b9deb1c755b1f928c1b8b5b187bcaebe9c16b555914a95e9ea4",
|
| 1607 |
+
"language": "C/C++",
|
| 1608 |
+
"lines": 110,
|
| 1609 |
+
"truncated": false,
|
| 1610 |
+
"block": 19,
|
| 1611 |
+
"row": 1802
|
| 1612 |
+
},
|
| 1613 |
+
{
|
| 1614 |
+
"path": "src/Code/Transformations/mialsrtkSliceBySliceTransform.h",
|
| 1615 |
+
"sha256": "8f1762e9d741b6cc0f682f0aaa1c2632eaacd770a9f339b3677c4c0f88048126",
|
| 1616 |
+
"language": "C/C++",
|
| 1617 |
+
"lines": 209,
|
| 1618 |
+
"truncated": false,
|
| 1619 |
+
"block": 19,
|
| 1620 |
+
"row": 2347
|
| 1621 |
+
},
|
| 1622 |
+
{
|
| 1623 |
+
"path": "src/Code/Transformations/mialsrtkSliceBySliceTransformBase.h",
|
| 1624 |
+
"sha256": "f8d95ab94cd85dbba31c6274a113b5f9a215118618ed8b68ec0706819dceb6bb",
|
| 1625 |
+
"language": "C/C++",
|
| 1626 |
+
"lines": 214,
|
| 1627 |
+
"truncated": false,
|
| 1628 |
+
"block": 19,
|
| 1629 |
+
"row": 2391
|
| 1630 |
+
},
|
| 1631 |
+
{
|
| 1632 |
+
"path": "src/Code/Transformations/mialsrtkVersorSliceBySliceTransform.h",
|
| 1633 |
+
"sha256": "543bc016221bfb6ae2e53a02d7266725c22eaf4b854d8847abe73e0b41770ee6",
|
| 1634 |
+
"language": "C/C++",
|
| 1635 |
+
"lines": 209,
|
| 1636 |
+
"truncated": false,
|
| 1637 |
+
"block": 19,
|
| 1638 |
+
"row": 2349
|
| 1639 |
+
},
|
| 1640 |
+
{
|
| 1641 |
+
"path": "src/IntensityStandardization/mialsrtkHistogramNormalization.py",
|
| 1642 |
+
"sha256": "52e6ce656a486291cab8fa81e4aa2eea8ac0f5eec94852d4c3917bf45d9359d0",
|
| 1643 |
+
"language": "Python",
|
| 1644 |
+
"lines": 488,
|
| 1645 |
+
"truncated": false,
|
| 1646 |
+
"block": 19,
|
| 1647 |
+
"row": 13837
|
| 1648 |
+
}
|
| 1649 |
+
]
|
| 1650 |
+
}
|
manifests/0b/github.com__cfy2yue__tcm-navigator.json
ADDED
|
@@ -0,0 +1,30 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/cfy2yue/tcm-navigator",
|
| 4 |
+
"url": "https://github.com/cfy2yue/TCM-Navigator",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "c972d194ab66a76a606c98313d9e5db925eeb4f2",
|
| 7 |
+
"license": "Apache-2.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "c71d239df91726fc519c6eb72d318ec65820627232b2f796219e87dcf35d0ab4",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 201,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2216
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "a5599337c355e7f7e11257052bd539b6178d9ae1d19db54c5bf2dc85de014c1a",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 136,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16117
|
| 28 |
+
}
|
| 29 |
+
]
|
| 30 |
+
}
|
manifests/10/figshare__26336812.json
ADDED
|
@@ -0,0 +1,426 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "figshare:26336812",
|
| 4 |
+
"url": "https://doi.org/10.6084/m9.figshare.26336812.v1",
|
| 5 |
+
"host": "figshare.com",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "DH_to_LR.m",
|
| 13 |
+
"sha256": "9e4957ca7b71a6f3b6a82f78db66cf36c74c5ed5bfd7a1b49c378f8c31fa62c6",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 28,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 5244
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "MLP_affected_unaffected.ipynb",
|
| 22 |
+
"sha256": "62cafb25b91e31ffd92e685df605556e55704d3617b6022ecc20ba70aea0c521",
|
| 23 |
+
"language": "Jupyter",
|
| 24 |
+
"lines": 173,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 3928
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "MLP_healthy_patient.ipynb",
|
| 31 |
+
"sha256": "fde636752c22657d1659c646b3db8b003c9d84eef38af51b7dc36324d0833d9a",
|
| 32 |
+
"language": "Jupyter",
|
| 33 |
+
"lines": 169,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 3925
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "MLP_severity.ipynb",
|
| 40 |
+
"sha256": "3eb3d99a1d9517bce526e0f080f462119a954bfdc761c83bb29da84cd2bef367",
|
| 41 |
+
"language": "Jupyter",
|
| 42 |
+
"lines": 172,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 3935
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "R_squared.m",
|
| 49 |
+
"sha256": "40e73020819351792f8b05ef726c05a01ed78d040dddcaeb21539a4012f6e49a",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 37,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 5266
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "SVM.ipynb",
|
| 58 |
+
"sha256": "66b211628fb734a7244a3295c4ac36062ac7e6b6e3ccb3177519218e6318bf6b",
|
| 59 |
+
"language": "Jupyter",
|
| 60 |
+
"lines": 139,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 3889
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "cleaning.m",
|
| 67 |
+
"sha256": "5923c06b59d96eb4dfd722a6756cc3fad20365bb2e77e44df4b4a6761fed9510",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 1175,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 8346
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "dataset_process.m",
|
| 76 |
+
"sha256": "9fc22670c9a8195b1677af26d3e599a84f87b05f518fdb84eeb2ca06f91cd230",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 553,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 8241
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "extractData.m",
|
| 85 |
+
"sha256": "f24472d09ae367e92912c3e0ad6f2639939b3520c15ad4e822753e9e614c016c",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 113,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 6632
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "extractFeature.m",
|
| 94 |
+
"sha256": "bfdec5fa74c2bbcc962ce839314cc91a3b67d1d8debb074a80570b1610dd5bbb",
|
| 95 |
+
"language": "MATLAB",
|
| 96 |
+
"lines": 152,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 7189
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "extract_data_RNN.m",
|
| 103 |
+
"sha256": "01e1b5927419e197288437dc53108863f6142fd3c43689025b22192f0a01bb24",
|
| 104 |
+
"language": "MATLAB",
|
| 105 |
+
"lines": 194,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 7605
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "extract_data_scatter_box.m",
|
| 112 |
+
"sha256": "7562122e118a2c3a5c572303efe71fd5e397c014884e9f2cd8c43a2ee0d5759b",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 82,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 7027
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "gait_path_area_after_D.m",
|
| 121 |
+
"sha256": "a95ebf1a6c61e7ec3ac2dafcf32511c2fa8fec20fb0a15fb5e24b77e2ac0fd22",
|
| 122 |
+
"language": "MATLAB",
|
| 123 |
+
"lines": 87,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 6098
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "gait_path_area_after_H.m",
|
| 130 |
+
"sha256": "85fd29dce187415ee97897cec308f5480aef31c3f70be0a4b890641f1883e9ca",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 87,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 6106
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "gait_path_area_before_D.m",
|
| 139 |
+
"sha256": "1dd355e3857be7c9a5f3b947c32b76b321bb2a22924b3b92854cc100567dafd5",
|
| 140 |
+
"language": "MATLAB",
|
| 141 |
+
"lines": 125,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 6606
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "gait_path_area_before_H.m",
|
| 148 |
+
"sha256": "1245361666d451c547cee7e7104ac5f7e5101130135294b42570e84894bf252d",
|
| 149 |
+
"language": "MATLAB",
|
| 150 |
+
"lines": 132,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 6745
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "kruskal.m",
|
| 157 |
+
"sha256": "6a63f7cf8826731b7e4850af6ba82ed5ff481c08f71bfa16f23a0ec35e562cdf",
|
| 158 |
+
"language": "MATLAB",
|
| 159 |
+
"lines": 35,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 5147
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "limit_cycle_hip_area_after_D.m",
|
| 166 |
+
"sha256": "a74a069680c77acbd08a34db0bb14fc5559cf41fe79a506f938bc74f86e3aa96",
|
| 167 |
+
"language": "MATLAB",
|
| 168 |
+
"lines": 72,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 5907
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "limit_cycle_hip_area_after_H.m",
|
| 175 |
+
"sha256": "7d87464c7f238f99aeb35616bfe1c0477003f212f852ffca84c6eafdb64cf236",
|
| 176 |
+
"language": "MATLAB",
|
| 177 |
+
"lines": 75,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 5952
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "limit_cycle_hip_area_before_D.m",
|
| 184 |
+
"sha256": "dcf2e839f61b04b8d57d5753bd964fd9f6d2ec10cbeebde8300f71c5bfcdc54f",
|
| 185 |
+
"language": "MATLAB",
|
| 186 |
+
"lines": 103,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 6393
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "limit_cycle_hip_area_before_H.m",
|
| 193 |
+
"sha256": "27eac65de8b6f1d3845cd73e2b51f5aec0382610e5b98a11a8bd9f4175301f3d",
|
| 194 |
+
"language": "MATLAB",
|
| 195 |
+
"lines": 96,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 6324
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "limit_cycle_knee_area_after_D.m",
|
| 202 |
+
"sha256": "a98eb2b0b07b48cd92128e4eb1cf78f6c7b7a85cced2dc3fc5ba4e44044a9f53",
|
| 203 |
+
"language": "MATLAB",
|
| 204 |
+
"lines": 97,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 6178
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "limit_cycle_knee_area_after_H.m",
|
| 211 |
+
"sha256": "83d21b455e662311f52072e380f2e7bc324f1d653dd1507bcc5d90e552bf7470",
|
| 212 |
+
"language": "MATLAB",
|
| 213 |
+
"lines": 115,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 6396
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "limit_cycle_knee_area_before_D.m",
|
| 220 |
+
"sha256": "31cb9136fce57ea867dc1a7266b9611e776a2b229ebbc59a637798f8be3c13b2",
|
| 221 |
+
"language": "MATLAB",
|
| 222 |
+
"lines": 144,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 6703
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "limit_cycle_knee_area_before_H.m",
|
| 229 |
+
"sha256": "77048ad9aae52f4cc6586a339cc27a43dc91b4a544f7f5d582b8dec8a59c32f0",
|
| 230 |
+
"language": "MATLAB",
|
| 231 |
+
"lines": 151,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 6867
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "little_circle_area_after_D.m",
|
| 238 |
+
"sha256": "1f3e64a59dfef43056a228f18896786c68d0998067524fd164bd01b6b688be49",
|
| 239 |
+
"language": "MATLAB",
|
| 240 |
+
"lines": 148,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 6794
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "little_circle_area_after_H.m",
|
| 247 |
+
"sha256": "1f3a3b48ca5d972e8e1c2b61cbe9e22399ac11c36cbf55a3c6f663b8a40564f1",
|
| 248 |
+
"language": "MATLAB",
|
| 249 |
+
"lines": 179,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 7032
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "little_circle_area_before_D.m",
|
| 256 |
+
"sha256": "6518c2336138664b8a2e537ccff08121fe14a057ce442830a17da5c90d70e8be",
|
| 257 |
+
"language": "MATLAB",
|
| 258 |
+
"lines": 251,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 7413
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "little_circle_area_before_H.m",
|
| 265 |
+
"sha256": "9ae98aff697d0d6f6aab0174e510b543fb9fcd3d3949ca86bd5270dfce1274bc",
|
| 266 |
+
"language": "MATLAB",
|
| 267 |
+
"lines": 266,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 7499
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "main.m",
|
| 274 |
+
"sha256": "8da453b464d4dea68d260c642cd9223f6f4a0236d01ea63f7a85c817671d2e2f",
|
| 275 |
+
"language": "MATLAB",
|
| 276 |
+
"lines": 131,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 19,
|
| 279 |
+
"row": 7580
|
| 280 |
+
},
|
| 281 |
+
{
|
| 282 |
+
"path": "path_speed_area_after_D.m",
|
| 283 |
+
"sha256": "ef4860586f5a3e9fc6cb49588b65e51646ff103f7964b9160d2525710145c39e",
|
| 284 |
+
"language": "MATLAB",
|
| 285 |
+
"lines": 54,
|
| 286 |
+
"truncated": false,
|
| 287 |
+
"block": 19,
|
| 288 |
+
"row": 5698
|
| 289 |
+
},
|
| 290 |
+
{
|
| 291 |
+
"path": "path_speed_area_after_H.m",
|
| 292 |
+
"sha256": "d946812f8378e0c9d68ee31bc75304551303215d8343d361616d10008f73c745",
|
| 293 |
+
"language": "MATLAB",
|
| 294 |
+
"lines": 59,
|
| 295 |
+
"truncated": false,
|
| 296 |
+
"block": 19,
|
| 297 |
+
"row": 5771
|
| 298 |
+
},
|
| 299 |
+
{
|
| 300 |
+
"path": "path_speed_area_before_D.m",
|
| 301 |
+
"sha256": "3e88e6b9b7f39531f984617166782aab194afd72260cdb336504445bf1f45fba",
|
| 302 |
+
"language": "MATLAB",
|
| 303 |
+
"lines": 96,
|
| 304 |
+
"truncated": false,
|
| 305 |
+
"block": 19,
|
| 306 |
+
"row": 6345
|
| 307 |
+
},
|
| 308 |
+
{
|
| 309 |
+
"path": "path_speed_area_before_H.m",
|
| 310 |
+
"sha256": "3ca33d8d90bc991af841790b86df119e97709f348613caedf5e7e9ce87d833b5",
|
| 311 |
+
"language": "MATLAB",
|
| 312 |
+
"lines": 76,
|
| 313 |
+
"truncated": false,
|
| 314 |
+
"block": 19,
|
| 315 |
+
"row": 6141
|
| 316 |
+
},
|
| 317 |
+
{
|
| 318 |
+
"path": "plot_R_squared.m",
|
| 319 |
+
"sha256": "7c7587a082033132fa79b011f2dfa5c7da166b0e1ec0a9596284ae2c461bf6a5",
|
| 320 |
+
"language": "MATLAB",
|
| 321 |
+
"lines": 23,
|
| 322 |
+
"truncated": false,
|
| 323 |
+
"block": 19,
|
| 324 |
+
"row": 4921
|
| 325 |
+
},
|
| 326 |
+
{
|
| 327 |
+
"path": "plot_boxes_grades.m",
|
| 328 |
+
"sha256": "fbce872286d2afe75efcff6662e3c181cba541beb3f14b67710a9018097dc9f2",
|
| 329 |
+
"language": "MATLAB",
|
| 330 |
+
"lines": 35,
|
| 331 |
+
"truncated": false,
|
| 332 |
+
"block": 19,
|
| 333 |
+
"row": 5459
|
| 334 |
+
},
|
| 335 |
+
{
|
| 336 |
+
"path": "plot_boxes_legs.m",
|
| 337 |
+
"sha256": "31379dc9ec3d77e8dbe0833d98b1976beecf28f3fd03dc3206e3ad03f12ab357",
|
| 338 |
+
"language": "MATLAB",
|
| 339 |
+
"lines": 36,
|
| 340 |
+
"truncated": false,
|
| 341 |
+
"block": 19,
|
| 342 |
+
"row": 5508
|
| 343 |
+
},
|
| 344 |
+
{
|
| 345 |
+
"path": "plot_corr_map_LR.m",
|
| 346 |
+
"sha256": "b6e837d38bd9a3508e62dfc357979a05e57719a35fb7c5da54bb8421ab5acb1d",
|
| 347 |
+
"language": "MATLAB",
|
| 348 |
+
"lines": 28,
|
| 349 |
+
"truncated": false,
|
| 350 |
+
"block": 19,
|
| 351 |
+
"row": 5043
|
| 352 |
+
},
|
| 353 |
+
{
|
| 354 |
+
"path": "plot_joint_trajectories.m",
|
| 355 |
+
"sha256": "61eb502e335b649f1148a3bff2b047a8ad73a33be6264096adfcb9682d44aa36",
|
| 356 |
+
"language": "MATLAB",
|
| 357 |
+
"lines": 76,
|
| 358 |
+
"truncated": false,
|
| 359 |
+
"block": 19,
|
| 360 |
+
"row": 5956
|
| 361 |
+
},
|
| 362 |
+
{
|
| 363 |
+
"path": "plot_kruskal.m",
|
| 364 |
+
"sha256": "b0f08522b6a64686e84a2da9140fdc28ebab53a6bb40b3c8a0dc2ca96b152a31",
|
| 365 |
+
"language": "MATLAB",
|
| 366 |
+
"lines": 19,
|
| 367 |
+
"truncated": false,
|
| 368 |
+
"block": 19,
|
| 369 |
+
"row": 4745
|
| 370 |
+
},
|
| 371 |
+
{
|
| 372 |
+
"path": "plot_scatter_after_grades.m",
|
| 373 |
+
"sha256": "032ca3ad399a812f21b199bc33c62d3d251a04d61102db8983a6745bcea86a80",
|
| 374 |
+
"language": "MATLAB",
|
| 375 |
+
"lines": 23,
|
| 376 |
+
"truncated": false,
|
| 377 |
+
"block": 19,
|
| 378 |
+
"row": 5065
|
| 379 |
+
},
|
| 380 |
+
{
|
| 381 |
+
"path": "plot_scatter_after_legs.m",
|
| 382 |
+
"sha256": "ba4b5da42c4a587f99ad1426df0da732099aa28f79eecb8cdef7dab11ca6c46b",
|
| 383 |
+
"language": "MATLAB",
|
| 384 |
+
"lines": 20,
|
| 385 |
+
"truncated": false,
|
| 386 |
+
"block": 19,
|
| 387 |
+
"row": 4950
|
| 388 |
+
},
|
| 389 |
+
{
|
| 390 |
+
"path": "plot_scatter_before_grades.m",
|
| 391 |
+
"sha256": "46f5f10b738cf908b5bf1e71e38a463fede61fa4ce5a6f13d1f0a524856fca2d",
|
| 392 |
+
"language": "MATLAB",
|
| 393 |
+
"lines": 40,
|
| 394 |
+
"truncated": false,
|
| 395 |
+
"block": 19,
|
| 396 |
+
"row": 5684
|
| 397 |
+
},
|
| 398 |
+
{
|
| 399 |
+
"path": "plot_scatter_before_legs.m",
|
| 400 |
+
"sha256": "8056b623a1478f4c9c7e3d70b9716d019bea34e9501945b02c6a32785197909e",
|
| 401 |
+
"language": "MATLAB",
|
| 402 |
+
"lines": 25,
|
| 403 |
+
"truncated": false,
|
| 404 |
+
"block": 19,
|
| 405 |
+
"row": 5143
|
| 406 |
+
},
|
| 407 |
+
{
|
| 408 |
+
"path": "plot_top_features.m",
|
| 409 |
+
"sha256": "74e392a1b953fbf401eac1a5b7de53de8f6d54391b4a25751dc50a38f28784db",
|
| 410 |
+
"language": "MATLAB",
|
| 411 |
+
"lines": 62,
|
| 412 |
+
"truncated": false,
|
| 413 |
+
"block": 19,
|
| 414 |
+
"row": 5815
|
| 415 |
+
},
|
| 416 |
+
{
|
| 417 |
+
"path": "slancode.m",
|
| 418 |
+
"sha256": "775ab1fc63e87f7b847eddd1e38cbda02e66f4cfa9d4807e2ca6201f6e16531f",
|
| 419 |
+
"language": "MATLAB",
|
| 420 |
+
"lines": 73,
|
| 421 |
+
"truncated": false,
|
| 422 |
+
"block": 19,
|
| 423 |
+
"row": 6584
|
| 424 |
+
}
|
| 425 |
+
]
|
| 426 |
+
}
|
manifests/10/zenodo__15192327.json
ADDED
|
@@ -0,0 +1,129 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:15192327",
|
| 4 |
+
"url": "https://zenodo.org/records/15192327",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "README.md",
|
| 13 |
+
"sha256": "49d6ccc79cc4eeeb297afe122c0a9771de687af5a93d4260a22d01d45f4356d9",
|
| 14 |
+
"language": "Text",
|
| 15 |
+
"lines": 59,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 16111
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "graph_attention/attention_visualization.py",
|
| 22 |
+
"sha256": "bc9977945768332d41533c38f1acf2da6cd5d8f3b50013e080a088d01d72fa06",
|
| 23 |
+
"language": "Python",
|
| 24 |
+
"lines": 564,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 14041
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "graph_attention/attention_viz.ipynb",
|
| 31 |
+
"sha256": "8a06ead2437f827c7dc901c8554d09e43bcfc02f1111959fbd5c25f6d3050460",
|
| 32 |
+
"language": "Jupyter",
|
| 33 |
+
"lines": 104,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 3828
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "scripts/compute_embeddings.py",
|
| 40 |
+
"sha256": "cbbf6e5ce95d8eb451b4794750cfc6a562a772555f1746d060e620ff3e23aeae",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 30,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 9079
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "scripts/create_dataset_embeddings.py",
|
| 49 |
+
"sha256": "ace2821388b4c1d946b3a7c9b205269bdbe4bef56a65a718258eeb08c420bc05",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 98,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 10383
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "scripts/create_result_tables.py",
|
| 58 |
+
"sha256": "9b589a4703920fa71608c15223fe61fc7ee791aec2dcb5467a75f6a4e72d78d9",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 303,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 13185
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "scripts/download_biolip_structures.pl",
|
| 67 |
+
"sha256": "4a736d5b85be769fa940cca1a872805864a3760ea3bafb506b770b1e72a4b6fa",
|
| 68 |
+
"language": "Perl",
|
| 69 |
+
"lines": 75,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 8487
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "scripts/get_structural_information.py",
|
| 76 |
+
"sha256": "fc47bf722460e5513acc454ee028c554c54e8137bf019972628e8d57fd6bb723",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 182,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 12127
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "scripts/inference.py",
|
| 85 |
+
"sha256": "7583f4ef30ee3e435a7d99f9ffa73c009b5a64324069db68598e7d68fe342a79",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 89,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 9905
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "scripts/inference.sh",
|
| 94 |
+
"sha256": "fbab914ecbe1174ec7f170cb672438cce1554a667c19df49148ea5313095e76b",
|
| 95 |
+
"language": "Shell",
|
| 96 |
+
"lines": 5,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 15236
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "scripts/manual_corrections.py",
|
| 103 |
+
"sha256": "af5427b89d33914707e93a876b855a253c37e019b6ab6265586afb4172427f32",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 107,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 10036
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "scripts/preprocessing_datasets.py",
|
| 112 |
+
"sha256": "595ebb5489cdf92e0503b23e9fc6a37eca888ea483c17009bc0ebd616760533f",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 263,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 13048
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "scripts/train_model.py",
|
| 121 |
+
"sha256": "bb7ad8909d2a819dbb7cbc65cb464c214fa3a3fa60d20e23fa3c6f0dd51d4868",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 372,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 13593
|
| 127 |
+
}
|
| 128 |
+
]
|
| 129 |
+
}
|
manifests/12/github.com__hugocwb__chowwingbometal_2025_elife.json
ADDED
|
@@ -0,0 +1,66 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/hugocwb/chowwingbometal_2025_elife",
|
| 4 |
+
"url": "https://github.com/HugoCWB/ChowWingBomEtAl_2025_eLife",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "0014b8fa0797ece45b1bf5cadca99a20e4999f25",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "BackProjection_Slopes_Controls.m",
|
| 13 |
+
"sha256": "0ff0a608b4b29d64353cbdf3b11f083680f36b565faca83690b384e914a656d4",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 1606,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 8386
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "BackProjection_Slopes_Patient.m",
|
| 22 |
+
"sha256": "2442a494862f8a11bb44ecce86a7c3fbc84aec39b78bc90ce9f9638565cfabad",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 655,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 8251
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "LICENSE",
|
| 31 |
+
"sha256": "bbae5470b6bea32057522573a177cf873eb5e732c9c121c2a425f61a261e58c0",
|
| 32 |
+
"language": "License",
|
| 33 |
+
"lines": 21,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 4244
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "README.md",
|
| 40 |
+
"sha256": "9117f4d03a84b49a29accc2decb0282caad9ba7bc52244763ac1b7076d124799",
|
| 41 |
+
"language": "Text",
|
| 42 |
+
"lines": 72,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 16107
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "Reliability_Slopes.m",
|
| 49 |
+
"sha256": "9de46a8744fb9673469e5776ea89a68eaeabf7ff4fa7a0393d6f3dd611e586e3",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 150,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 7343
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "dolinearfit_SqCdata.m",
|
| 58 |
+
"sha256": "9662e6a162cd6f446b22a998face839bf0d993f9a1329d5690eb0b1e1addbdde",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 102,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 6723
|
| 64 |
+
}
|
| 65 |
+
]
|
| 66 |
+
}
|
manifests/12/github.com__nellaker-group__placenta.json
ADDED
|
@@ -0,0 +1,237 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/nellaker-group/placenta",
|
| 4 |
+
"url": "https://github.com/nellaker-group/placenta",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "9ccd92e486efe18c9bb91d25a06b00ba3237f25c",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "4c8ea06d1e8f3f8a25b9be7d4fed74cdd8490674bbdb56a5d5b8529d67eecbda",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 21,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4223
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "b3c7c1d625f58372920dd1474fe7355f8ace83511a7ff21de5733718dc230250",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 151,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16165
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "eval.py",
|
| 31 |
+
"sha256": "07e9f817fb397204e6de3e230019896cb44173eabcdf780d5466e927c5422e29",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 113,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 10967
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "inference.py",
|
| 40 |
+
"sha256": "966145bc9cf78846aee890ac7679cb8d059707b63f6618c5e8fadfa565245e66",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 130,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 11603
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "placenta/analysis/vis_groundtruth.py",
|
| 49 |
+
"sha256": "67b077b9938f1478ea452b87fdb5d692b0cf15512229f2c1dcc0183b00d03c1c",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 129,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 10976
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "placenta/dataset.py",
|
| 58 |
+
"sha256": "e2cf3d3765ac3cc386711939b677fa964d4073e331d43c3dca860b1425488077",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 405,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 13733
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "placenta/enums.py",
|
| 67 |
+
"sha256": "cfbf50f307f777dc5698dbcc34515fbd1a23b2ba849c055a55b447befd8d5660",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 12,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 8711
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "placenta/evaluation_plots.py",
|
| 76 |
+
"sha256": "73dd94557f0a47f0f071676d69a47e71c178f08c86aea4a04b299e8849b4e42c",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 180,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 12366
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "placenta/logger/appenders.py",
|
| 85 |
+
"sha256": "51da90561b0d115663340b09cd46668a9a7e3ba49991b7b256a157b4c097f4f0",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 61,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 9840
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "placenta/logger/logger.py",
|
| 94 |
+
"sha256": "b9921c5ff2ab0d8484fcd93de9291b83c1a468bd3b2fecb42596d5e9af76f545",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 31,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 9331
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "placenta/models/clustergcn.py",
|
| 103 |
+
"sha256": "88a1ebe1a3e2f48b96b2a453d2315402e342968d5025739de9a3517468351e71",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 51,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 9816
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "placenta/models/gat.py",
|
| 112 |
+
"sha256": "c9454e429874def3dcedbe2aeffd74f624dc005482f504f5bbca5b573b1b3b3a",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 163,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 11962
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "placenta/models/graphsage.py",
|
| 121 |
+
"sha256": "86d315513adbab1c3c3ab26dfdf4b8878229e9c60b2d51d9892ec3b8f551a766",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 48,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 9743
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "placenta/models/graphsaint.py",
|
| 130 |
+
"sha256": "045d8ddce94f15052bc0e357c8f5f7f1c25b136d6bf6da737425458950cb2dea",
|
| 131 |
+
"language": "Python",
|
| 132 |
+
"lines": 51,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 9738
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "placenta/models/mlp.py",
|
| 139 |
+
"sha256": "088f2872c16fe21762a2040a3e2dfaaace9d6df2ded0e6fea1e8e7f93323bca5",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 35,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 9361
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "placenta/models/shadow.py",
|
| 148 |
+
"sha256": "1ee55ece50a8fddbfed9b13bbfad95adb63bde533ffa72e98a487aafec932f03",
|
| 149 |
+
"language": "Python",
|
| 150 |
+
"lines": 35,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 9496
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "placenta/models/sign.py",
|
| 157 |
+
"sha256": "feda6a3fa301ae5bf5f2b45830b4532eafb9adeaddd9631b908e62ffcefa72f6",
|
| 158 |
+
"language": "Python",
|
| 159 |
+
"lines": 40,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 9457
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "placenta/organs.py",
|
| 166 |
+
"sha256": "b84d72c24ee31bda06022b2f6efaec2e2fcb49110e7f334e5ab27f3bece2e287",
|
| 167 |
+
"language": "Python",
|
| 168 |
+
"lines": 73,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 10011
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "placenta/runners/eval_runner.py",
|
| 175 |
+
"sha256": "15c7203203ad29de6fb5192e565a83fccd353d724490c9036a108656db5aa46e",
|
| 176 |
+
"language": "Python",
|
| 177 |
+
"lines": 204,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 12311
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "placenta/runners/train_runner.py",
|
| 184 |
+
"sha256": "5e12f48ef54cdde106207e82b7a12f766ab2112f10d292e52cbabfb45cc8ea41",
|
| 185 |
+
"language": "Python",
|
| 186 |
+
"lines": 691,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 14234
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "placenta/tests/test_all_graph_constructors.py",
|
| 193 |
+
"sha256": "a09c42c0b2cc155288293894fe9c2913611b288f1ef013f202071a34dda4daf6",
|
| 194 |
+
"language": "Python",
|
| 195 |
+
"lines": 132,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 10920
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "placenta/tests/test_all_models_train_eval.py",
|
| 202 |
+
"sha256": "adbbf7b890a9c88f7433e1f01f33f6810c681b2c055fc6a6ccf00d64b942c5a7",
|
| 203 |
+
"language": "Python",
|
| 204 |
+
"lines": 384,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 13391
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "placenta/utils.py",
|
| 211 |
+
"sha256": "98f6fbdef16caeee430783378104ea55b7d1d45c0ac91ed07a630c31d5ab59d4",
|
| 212 |
+
"language": "Python",
|
| 213 |
+
"lines": 53,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 9430
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "setup.py",
|
| 220 |
+
"sha256": "9292bdc15918f81fd4c8fe7b9f5bae99251ab379fdcf6f0e055bdeb19d46bc47",
|
| 221 |
+
"language": "Python",
|
| 222 |
+
"lines": 28,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 9124
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "train.py",
|
| 229 |
+
"sha256": "458193c1aa8b39dd71f032c62d9c9541ceff5e178a5d70ee210220dd129f7650",
|
| 230 |
+
"language": "Python",
|
| 231 |
+
"lines": 130,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 11425
|
| 235 |
+
}
|
| 236 |
+
]
|
| 237 |
+
}
|
manifests/12/zenodo__14499167.json
ADDED
|
@@ -0,0 +1,273 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:14499167",
|
| 4 |
+
"url": "https://zenodo.org/records/14499167",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "ICA/ICA_mean_components.py",
|
| 13 |
+
"sha256": "e5aff61e1c37a045d2cf288989ed708db7eb3a9f809c2da65d1e581b54830da5",
|
| 14 |
+
"language": "Python",
|
| 15 |
+
"lines": 42,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 9186
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "ICA/ICA_processing_template.ipynb",
|
| 22 |
+
"sha256": "fce319fe80e1f973e342041b366c5bd7ce8c2e49448df093ce470c7dae220840",
|
| 23 |
+
"language": "Jupyter",
|
| 24 |
+
"lines": 350,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 3937
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "ICA/__init__.py",
|
| 31 |
+
"sha256": "334359b90efed75da5f0ada1d5e6b256f4a6bd0aee7eb39c0f90182a021ffc8b",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 1,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 12,
|
| 36 |
+
"row": 2985
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "ICA/old/ICA checking.ipynb",
|
| 40 |
+
"sha256": "de52c3246c028120ebf6fc38c0fbf0732bc87c4431e860a9a28dd327b7652319",
|
| 41 |
+
"language": "Jupyter",
|
| 42 |
+
"lines": 603,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 3974
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "ICA/old/ICA testing.ipynb",
|
| 49 |
+
"sha256": "cc87359cfdd893ee6a363f408f68cc474c07f1e4da93cfa429fb678aadb584ae",
|
| 50 |
+
"language": "Jupyter",
|
| 51 |
+
"lines": 498,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 4007
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "LICENSE",
|
| 58 |
+
"sha256": "97a0e283d8e1ff9197b919e6d14fb669a180e78c6cee9ee0e61c9c9ab0e976ef",
|
| 59 |
+
"language": "License",
|
| 60 |
+
"lines": 21,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 4178
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "README.md",
|
| 67 |
+
"sha256": "4bcba500d5b918366e7f91a81930ae1ec3dd5486e5e90ac4b0579da2c4e12b1e",
|
| 68 |
+
"language": "Text",
|
| 69 |
+
"lines": 36,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 16049
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "base/__init__.py",
|
| 76 |
+
"sha256": "334359b90efed75da5f0ada1d5e6b256f4a6bd0aee7eb39c0f90182a021ffc8b",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 1,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 12,
|
| 81 |
+
"row": 2985
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "base/base_constants.py",
|
| 85 |
+
"sha256": "7b82fc5204d22791d3a594092f67e8ea1d2ff320635f3e50ce61b9772e08a04f",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 51,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 9585
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "base/files_in_out.py",
|
| 94 |
+
"sha256": "059624f9780a99f8a205a1681081ad8a59f5119de5fa20c3eada8a49912a82ee",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 182,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 12267
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "epochs/__init__.py",
|
| 103 |
+
"sha256": "334359b90efed75da5f0ada1d5e6b256f4a6bd0aee7eb39c0f90182a021ffc8b",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 1,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 12,
|
| 108 |
+
"row": 2985
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "epochs/epochs_constants.py",
|
| 112 |
+
"sha256": "7ce967a53f0dae1a99d619056d6f0d1f4cefe7ba15fe49dd1d9fe03f0f762c34",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 52,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 9148
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "epochs/epochs_helper.py",
|
| 121 |
+
"sha256": "b629a144ab52dea761cc879687b5f1c7520f478f3ee2ddfdafe116b86ec4ef86",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 327,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 13262
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "epochs/epochs_main.py",
|
| 130 |
+
"sha256": "3f02fba697f020a8728c8decfb1196c1761404b07dbd6775ec1cddcc9599363d",
|
| 131 |
+
"language": "Python",
|
| 132 |
+
"lines": 46,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 9280
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "evoked/__init__.py",
|
| 139 |
+
"sha256": "334359b90efed75da5f0ada1d5e6b256f4a6bd0aee7eb39c0f90182a021ffc8b",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 1,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 12,
|
| 144 |
+
"row": 2985
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "evoked/autoreject_helper.py",
|
| 148 |
+
"sha256": "1d202673541c1183e30ff578005865ccc5162488f4b42b66ad525158a6d653f3",
|
| 149 |
+
"language": "Python",
|
| 150 |
+
"lines": 275,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 13072
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "evoked/evoked_MNE_helper.py",
|
| 157 |
+
"sha256": "13073fe56eef0583257ff800b1963f891ad058e9b23e2f73a1b9163e3ea2e596",
|
| 158 |
+
"language": "Python",
|
| 159 |
+
"lines": 268,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 13230
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "evoked/evoked_MNE_main.py",
|
| 166 |
+
"sha256": "af1eb5042909307923fe0ac38e87575a5137dd11e6075c2d4d48d9734f0fb3e4",
|
| 167 |
+
"language": "Python",
|
| 168 |
+
"lines": 98,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 9982
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "evoked/evoked_cleanbad_helper.py",
|
| 175 |
+
"sha256": "10c2397b4804306c3c525dd3e2f048341d4a30917d782ad23fe2c5265a90ebf0",
|
| 176 |
+
"language": "Python",
|
| 177 |
+
"lines": 43,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 9159
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "evoked/evoked_cleanbad_main.py",
|
| 184 |
+
"sha256": "28176f85b2d0a8858e3167b3e377696068e58961f67865eaf8621dc8e7f169b9",
|
| 185 |
+
"language": "Python",
|
| 186 |
+
"lines": 41,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 9271
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "evoked/evoked_constants.py",
|
| 193 |
+
"sha256": "76557432dbd6ca9f472f3013e727185752cdda4d55c0425a092ed6b8bbc81774",
|
| 194 |
+
"language": "Python",
|
| 195 |
+
"lines": 96,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 10414
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "evoked/evoked_main.py",
|
| 202 |
+
"sha256": "a11a1a1783abbc2de21b3a797a2ad37c455e1616822c1c5fed8755f4bacccf1b",
|
| 203 |
+
"language": "Python",
|
| 204 |
+
"lines": 43,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 9327
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "markers/__init__.py",
|
| 211 |
+
"sha256": "334359b90efed75da5f0ada1d5e6b256f4a6bd0aee7eb39c0f90182a021ffc8b",
|
| 212 |
+
"language": "Python",
|
| 213 |
+
"lines": 1,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 12,
|
| 216 |
+
"row": 2985
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "markers/markers_MNE_helper.py",
|
| 220 |
+
"sha256": "687805da58ebf525c0b3fb60553feb3fadcd047e20d02c168fe3ae59adf04b5a",
|
| 221 |
+
"language": "Python",
|
| 222 |
+
"lines": 686,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 14316
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "markers/markers_constants.py",
|
| 229 |
+
"sha256": "938681ee0e9a7a98a30101af67d3f893afa2170158e968653762196cdbf1d3b9",
|
| 230 |
+
"language": "Python",
|
| 231 |
+
"lines": 85,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 9601
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "markers/markers_helper.py",
|
| 238 |
+
"sha256": "07e0e66ba5f142237353997b119093f817e9a16ab5040fefc2d861f0d483e5b0",
|
| 239 |
+
"language": "Python",
|
| 240 |
+
"lines": 524,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 14189
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "markers/markers_main.py",
|
| 247 |
+
"sha256": "275f169006b54976d989964ff4b6a79dcec0d62c51d3f7ce3515ea43271b1967",
|
| 248 |
+
"language": "Python",
|
| 249 |
+
"lines": 62,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 9590
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "stats/Behav_stats.ipynb",
|
| 256 |
+
"sha256": "e4440592e68731f86dc52b84fcfba8f3bbc2b602db44fe879528b1fb085e11d8",
|
| 257 |
+
"language": "Jupyter",
|
| 258 |
+
"lines": 332,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 3960
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "stats/ERP_stats.ipynb",
|
| 265 |
+
"sha256": "305367b13af0573799da7fc7325f5bbc15379704511d91eb8ed498acca50ae0e",
|
| 266 |
+
"language": "Jupyter",
|
| 267 |
+
"lines": 142,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 3883
|
| 271 |
+
}
|
| 272 |
+
]
|
| 273 |
+
}
|
manifests/13/zenodo__15801774.json
ADDED
|
@@ -0,0 +1,66 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:15801774",
|
| 4 |
+
"url": "10.5281/zenodo.15801774",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "Fig4b.m",
|
| 13 |
+
"sha256": "7fb896c8f48863368aa93d4b1a7f44fe79e9f8b66382b485361cfeba42549faf",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 20,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4666
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "Fig7e&i.m",
|
| 22 |
+
"sha256": "40d8f850b070ec6864c7cbc1f7ceaf7b7ac297eef4279189b57ddef6707d7b0d",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 39,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 5772
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "FigS2c&h.m",
|
| 31 |
+
"sha256": "58439890a0db0b96ce95cae3d24204a4389372d9d29bc09486930c6efe4d541d",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 69,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 5954
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "FigS2e&j.m",
|
| 40 |
+
"sha256": "75472fed391788acd9a4570de563cc090a242268387432f673915c01e8801933",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 102,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 6641
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "LME.m",
|
| 49 |
+
"sha256": "4a8ca116d8d51e1925a44de595b487d08be1ff126e39b0debbb721a6f0d221f6",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 14,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 4578
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "ROC.m",
|
| 58 |
+
"sha256": "9cb6acba78c70413f0910a4c37ddfafebd1c14390d4e446dde993d42e4a4ac44",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 88,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 6247
|
| 64 |
+
}
|
| 65 |
+
]
|
| 66 |
+
}
|
manifests/13/zenodo__16880929.json
ADDED
|
@@ -0,0 +1,48 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:16880929",
|
| 4 |
+
"url": "10.5281/zenodo.16880929",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "Leonardon_et_al_code/Fig1/Population_trace_plots.m",
|
| 13 |
+
"sha256": "39c9e8e63c1b6592c0d0a469b05557be5d50afedb89410bd3672002afb6068d7",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 66,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 5095
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "Leonardon_et_al_code/Fig2/Population_trace_plots.m",
|
| 22 |
+
"sha256": "9e6c3bfe4257e813729f4e9709c40f52ad53ca223d27ee834c616157deda4992",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 66,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 5096
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "Leonardon_et_al_code/Fig3/Population_trace_plots.m",
|
| 31 |
+
"sha256": "1a794b9f14ef4185125aa1b9ca7c9c628437002fe5cb53df73fd673c88a5ea44",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 66,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 5093
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "Leonardon_et_al_code/Fig4/Population_trace_plots.m",
|
| 40 |
+
"sha256": "24eae15f20c99ecf55dcf1cebde82388fa761787d29927989cb47444bc894969",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 66,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 5094
|
| 46 |
+
}
|
| 47 |
+
]
|
| 48 |
+
}
|
manifests/14/zenodo__15718273.json
ADDED
|
@@ -0,0 +1,93 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:15718273",
|
| 4 |
+
"url": "10.5281/zenodo.15718273",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "Polysynaptic_Moon_et_al.m",
|
| 13 |
+
"sha256": "f974a968789b8875cc0ab8d137d28d688b900e1cf3a7ec032c681465cd8f955e",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 102,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 6471
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "matlabtools/load_nii.m",
|
| 22 |
+
"sha256": "a97662cb5cefd152253f20831e5e5344347c40c18bad93a529a96dbeadb8a2f7",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 198,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 1,
|
| 27 |
+
"row": 3856
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "matlabtools/load_nii_hdr.m",
|
| 31 |
+
"sha256": "77993efbb572cb36320aa3c5858a50ca29e066be0437c7e10d113e1b7efb77eb",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 280,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 1,
|
| 36 |
+
"row": 4047
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "matlabtools/load_nii_img.m",
|
| 40 |
+
"sha256": "c71cd73df908101c760ac03d115a45493060342f9d4ad889636c05467e9178be",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 392,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 1,
|
| 45 |
+
"row": 4118
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "matlabtools/make_nii.m",
|
| 49 |
+
"sha256": "e47478d06561bc95603d7d9a563af5e2134be7009555adc2ba22aad8682888f9",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 256,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 1,
|
| 54 |
+
"row": 3868
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "matlabtools/make_nii_20241112.m",
|
| 58 |
+
"sha256": "7b9bf4a5b345ad3cfc49734cf44731368cd571652d75e42be7d4b4653b3174c3",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 256,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 7389
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "matlabtools/save_nii.m",
|
| 67 |
+
"sha256": "f0de5ec7eef43af9666ea388d38d3e0142f984a560f8e5f3d74512881fdf2517",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 286,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 1,
|
| 72 |
+
"row": 4024
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "matlabtools/save_nii_hdr.m",
|
| 76 |
+
"sha256": "d42ed8e7335260f511c09e70de2c16ec9ec02d557bf2286ca2d282bb51e687b6",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 227,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 1,
|
| 81 |
+
"row": 4010
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "matlabtools/xform_nii.m",
|
| 85 |
+
"sha256": "9111971fdd93a79059e601d02d092f9878fe7011be4c97295a49243c8f76a2b3",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 521,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 1,
|
| 90 |
+
"row": 4230
|
| 91 |
+
}
|
| 92 |
+
]
|
| 93 |
+
}
|
manifests/16/github.com__ccicb__conshla.json
ADDED
|
@@ -0,0 +1,48 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/ccicb/conshla",
|
| 4 |
+
"url": "https://github.com/CCICB/consHLA",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "c2d1072c95afe85efafdedb06ff77e058368e845",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "c63d07594b0ac6b0a024163b98797fdbd1ac9e443247ee79fd7df884b50f815a",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 7,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4198
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "3fc01bffae4b6d60d071f4eb2d5ad9f9e3baf458eb647c6dab3f498fce8226ab",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 63,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16121
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "docker/hla-hd_consensus_parser/hlahd_consensus_parser_v2.py",
|
| 31 |
+
"sha256": "3cebcfc61e2f0a6f07ed7ad791c56845fd7d73660704fa40b7a524f632725015",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 381,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 13784
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "docker/hla_report/hla_report_generator.Rmd",
|
| 40 |
+
"sha256": "50c9ce9a9027c865d5eb6559081557e7bbccf64e033893de8467b29464d92708",
|
| 41 |
+
"language": "R",
|
| 42 |
+
"lines": 196,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 14985
|
| 46 |
+
}
|
| 47 |
+
]
|
| 48 |
+
}
|
manifests/16/github.com__susuneu__genderbias_adhd.json
ADDED
|
@@ -0,0 +1,48 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/susuneu/genderbias_adhd",
|
| 4 |
+
"url": "https://github.com/SusuNeu/genderbias_ADHD",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "feb11e65e20ffad0e79c3c0544243ed0417c5d53",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file license.txt",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "GenderBias_ADHD.ipynb",
|
| 13 |
+
"sha256": "e83f27142f8e4fd1dd55529afb5ac121e928a935d4a7bc51bacc556c662167df",
|
| 14 |
+
"language": "Jupyter",
|
| 15 |
+
"lines": 934,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4143
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "GenderBias_ADHD.py",
|
| 22 |
+
"sha256": "50b03c1b3a71ed29bdaf3956a6047f4507b8ed8e992df69f8331df8508d03a95",
|
| 23 |
+
"language": "Python",
|
| 24 |
+
"lines": 931,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 14471
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "README.md",
|
| 31 |
+
"sha256": "7ead97cadd5c90d4540d21de39bdec6808f5775489db24cb3d07d8331060fad5",
|
| 32 |
+
"language": "Text",
|
| 33 |
+
"lines": 91,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 16059
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "license.txt",
|
| 40 |
+
"sha256": "aafca513b10c673719db04ea8d6add908a90c5f439813ddb2637cfee792f9b98",
|
| 41 |
+
"language": "License",
|
| 42 |
+
"lines": 13,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 4256
|
| 46 |
+
}
|
| 47 |
+
]
|
| 48 |
+
}
|
manifests/16/zenodo__16734066.json
ADDED
|
@@ -0,0 +1,174 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:16734066",
|
| 4 |
+
"url": "https://doi.org/10.5281/zenodo.16734066",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "1DCNN_trainD1_testD2.py",
|
| 13 |
+
"sha256": "33a03f89eec61c6d30311e99b01d43b182b79c64aac700a002778b6e4e02ba99",
|
| 14 |
+
"language": "Python",
|
| 15 |
+
"lines": 153,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 11882
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "1DCNN_trainD2_testD1.py",
|
| 22 |
+
"sha256": "d03ae9491155a977bcf60764672af5949fb9205b0eeba4fdf3a9aac56f92cbc6",
|
| 23 |
+
"language": "Python",
|
| 24 |
+
"lines": 153,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 11877
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "DNN_combined_D1D2.py",
|
| 31 |
+
"sha256": "1fbc4590ab2c208a4f675b5ef0f6069c81a6b7533c49703d17fa2638dcd91f27",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 215,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 12461
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "DNN_original_data.py",
|
| 40 |
+
"sha256": "bdcb9066840a5d38599c6d356192ecd6edb0cae440fe1a4a2a4ad50e3b7e362d",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 174,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 12143
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "DNN_trainD1_testD2.py",
|
| 49 |
+
"sha256": "85d712c738b9e74915b4e673c4976db65cc5f2d3562ce45afc20879288036d0f",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 153,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 11883
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "DNN_trainD2_testD1.py",
|
| 58 |
+
"sha256": "fff3797499141b8702693ebac4a6199d9a742f906ffd2183b5398a2ffcd8db22",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 153,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 11878
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "RBF_SVM_combined_D1D2.py",
|
| 67 |
+
"sha256": "1c6195128baf650febab2905613708c31013124d3873daf023bbe4bb164dd394",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 204,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 12361
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "RBF_SVM_original_data.py",
|
| 76 |
+
"sha256": "b33dd75280e904f30e7cd3355974572b2873c993172ca271b40e09d62c51e40c",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 120,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 11428
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "RBF_SVM_trainD1_testD2.py",
|
| 85 |
+
"sha256": "262715dce01efe26bd1f18f2ab980734e5e15769aac21ab1c1e5c4bbed8650cc",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 133,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 11520
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "RBF_SVM_trainD2_testD1.py",
|
| 94 |
+
"sha256": "5d03d8c0b2550435b46a645af4011c7ebf2c7f39aca5c5807ff16f616d6545f1",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 133,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 11521
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "README.md",
|
| 103 |
+
"sha256": "702c99eff1b7f8f3e92bad8b5af3ef600b52a9d08983ade1b3f98888e691f98b",
|
| 104 |
+
"language": "Text",
|
| 105 |
+
"lines": 3,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 15947
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "linear_SVM_combined_D1D2.py",
|
| 112 |
+
"sha256": "0120aa85fd329eeacac92d6754ffc0da24b9050eda387f079d4ebe554eedd7b5",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 204,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 12379
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "linear_SVM_original_data.py",
|
| 121 |
+
"sha256": "5f5fd41db41640f00f24d10afa7fad153c81be2da920bbcf877955e73a1e9dc0",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 133,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 11546
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "linear_SVM_trainD1_testD2.py",
|
| 130 |
+
"sha256": "110f888e3a9e9934e72d9d16671e9bef550219aff13be2d4e58899dfffdeca8e",
|
| 131 |
+
"language": "Python",
|
| 132 |
+
"lines": 133,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 11526
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "linear_SVM_trainD2_testD1.py",
|
| 139 |
+
"sha256": "b6a0ea9ce98d342643cac5dff76c011289c0d422a88cb3b8ec8f29f17582d3af",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 133,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 11527
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "network_models.py",
|
| 148 |
+
"sha256": "c627b3b4d11becd8127a733feb127eba2c126f80bb39d39b98a497c90fccefbe",
|
| 149 |
+
"language": "Python",
|
| 150 |
+
"lines": 41,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 9365
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "svm_models.py",
|
| 157 |
+
"sha256": "e9ade822d6f0feb7a090521441ad035a4bca2a6c679a153ed5a13de03167d156",
|
| 158 |
+
"language": "Python",
|
| 159 |
+
"lines": 21,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 8918
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "varying_train_split_of_D2.py",
|
| 166 |
+
"sha256": "e2202d7fb679f5f2941bd2826f3bfb572347384e450611e62044ab5a3ba24484",
|
| 167 |
+
"language": "Python",
|
| 168 |
+
"lines": 323,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 13384
|
| 172 |
+
}
|
| 173 |
+
]
|
| 174 |
+
}
|
manifests/18/github.com__denisbrunet__cartool.json
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
manifests/19/github.com__kellywhiteford__musicianshipeeg.json
ADDED
|
@@ -0,0 +1,651 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/kellywhiteford/musicianshipeeg",
|
| 4 |
+
"url": "https://github.com/kellywhiteford/MusicianshipEEG",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "c3a19ebe2adf11eb75e30e538c4fcdc845f282fb",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "00a0658855627ec21a2ffd5b9c089d3f52a2418801bf74df8485a430fdaac5f8",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 21,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4228
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "51dbc3ca908dee6d2b977c9a706ff628e383768b960ce12035e26288e3659865",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 7,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 15994
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "code/11)EEG_da/da_amp_analysis.m",
|
| 31 |
+
"sha256": "e78a73f5774acce3cdeccd293bc65c95612f6ca3e8715fc4e18ec22b82a0e6d6",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 69,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 5897
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "code/11)EEG_da/da_amp_analysis_p.m",
|
| 40 |
+
"sha256": "4949722c774a27bf6373592e792437588abf44a78390b9d44bf5bd9bb29e8418",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 59,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 5665
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "code/11)EEG_da/da_amp_analysis_splitHalf.m",
|
| 49 |
+
"sha256": "66d7056038bc183effc09ce58d422732908c25a2ceb1f1a98d6e4e2ba40cd33c",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 76,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 6110
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "code/11)EEG_da/da_stim2resp.m",
|
| 58 |
+
"sha256": "ab87b8303d55638ce5aea7c4d0dd2db5f18c2ed8d070df81891a5060da25f48d",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 82,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 6343
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "code/11)EEG_da/da_stim2resp_adjusted.m",
|
| 67 |
+
"sha256": "c0323dfba4c0948a281c4934e172f249ab211e63a4852e1251c7f4be77010c03",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 106,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 6962
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "code/11)EEG_da/da_stim2resp_adjusted_splitHalf.m",
|
| 76 |
+
"sha256": "50295ce4c86ab988b70793e28a7c56a8baba6e2a4de96d1bf62ef76467e62bfc",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 126,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 7247
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "code/11)EEG_da/loadEEG_da.m",
|
| 85 |
+
"sha256": "f7d2874b9cc99ffa6774b1be12bfce65f5e45f2ed692eb9eacc8676359cc8269",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 24,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 4733
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "code/11)EEG_da/loadEEG_da_r.m",
|
| 94 |
+
"sha256": "1ff05af7b4ae30a32509ab29138f06d955f37114444f2cff7a6168c29aeb5d56",
|
| 95 |
+
"language": "MATLAB",
|
| 96 |
+
"lines": 43,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 5253
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "code/11)EEG_da/loadEEG_da_r_s.m",
|
| 103 |
+
"sha256": "ec933e6378290cc74e182358e97682780cb802943258b642387f91d59d2e2ba9",
|
| 104 |
+
"language": "MATLAB",
|
| 105 |
+
"lines": 30,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 5090
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "code/11)EEG_da/loadEEG_da_s.m",
|
| 112 |
+
"sha256": "3f69a297aa256ebf97b17f264f6c2d0372e804e1c33ef1adf56afbfab4c7c4d0",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 26,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 4809
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "code/11)EEG_da/plotStimFFRexamples.m",
|
| 121 |
+
"sha256": "02fb679322a9bdb107add9b28deebb5d64440054b51b60dcab50e6f0baca8f49",
|
| 122 |
+
"language": "MATLAB",
|
| 123 |
+
"lines": 69,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 5931
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "code/11)EEG_da/plotWithinSubjFFRs.m",
|
| 130 |
+
"sha256": "7c5931e25a16cda9c950fc6a1e19092ea9e682ad875a85080b85b247f95d0f08",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 49,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 5672
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "code/11)EEG_da/plot_da_age.m",
|
| 139 |
+
"sha256": "ce283ec457c17111d15bfcd624dfdfde434a7e523f56dec47637b6edbd6edd8e",
|
| 140 |
+
"language": "MATLAB",
|
| 141 |
+
"lines": 131,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 6947
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "code/11)EEG_da/plot_da_gender_violin.m",
|
| 148 |
+
"sha256": "59b7763d77cd76086f24eb137f0eae3c21b469850fcb6e1b9059cd2d87a94f7b",
|
| 149 |
+
"language": "MATLAB",
|
| 150 |
+
"lines": 176,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 7603
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "code/11)EEG_da/plot_da_violin.m",
|
| 157 |
+
"sha256": "880514e381f2f102a2a185f7973bd8d7130df1fd4f301ed62f11a02cc5730457",
|
| 158 |
+
"language": "MATLAB",
|
| 159 |
+
"lines": 276,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 7771
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "code/11)EEG_da/plot_rA_lim_violin.m",
|
| 166 |
+
"sha256": "87174e0dbc238b3919bf135150342c541ae8e7faf4a094baed788b4484c885d4",
|
| 167 |
+
"language": "MATLAB",
|
| 168 |
+
"lines": 73,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 6137
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "code/11)EEG_da/plot_r_violin.m",
|
| 175 |
+
"sha256": "30b8f144fd190fbe559cae36bdef7c7e9dd938fcd0c5251b9a8d58b47e02c6c4",
|
| 176 |
+
"language": "MATLAB",
|
| 177 |
+
"lines": 86,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 6403
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "code/11)EEG_da/preprocess_da.m",
|
| 184 |
+
"sha256": "175ec54ea156e798d0a3085abb20f22c4ab0aa9ed42f1778cff9309112a737dd",
|
| 185 |
+
"language": "MATLAB",
|
| 186 |
+
"lines": 98,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 6637
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "code/11)EEG_da/preprocess_da_pilot.m",
|
| 193 |
+
"sha256": "a8c0d37ebd41d9a9ac9c2457cbf03a969f714a0d3e00d045fa0bc7a7caefce42",
|
| 194 |
+
"language": "MATLAB",
|
| 195 |
+
"lines": 98,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 6644
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "code/11)EEG_da/preprocess_da_splitHalf.m",
|
| 202 |
+
"sha256": "b9802f9eb84c734bff36b3b9317ddf60a3f578d6a889e8ff4a50e50a6d9a543d",
|
| 203 |
+
"language": "MATLAB",
|
| 204 |
+
"lines": 98,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 6642
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "code/11)EEG_da/run_da.m",
|
| 211 |
+
"sha256": "ba365493cf0ca285ac98469f2ca04d635ba457ff5f611ce97e0ba33a43299c1f",
|
| 212 |
+
"language": "MATLAB",
|
| 213 |
+
"lines": 118,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 6795
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "code/11)EEG_da/run_da_splitHalf.m",
|
| 220 |
+
"sha256": "7ad474556d6781115b7c26d775d9cfaf9ab916541a8aa93a3997d50db5f3d51a",
|
| 221 |
+
"language": "MATLAB",
|
| 222 |
+
"lines": 56,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 5806
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "code/11)EEG_da/run_withinPilot_da.m",
|
| 229 |
+
"sha256": "37b28267bd864df006b2ac8face6cb0ba9b93aa0393a16f453f2879c7707edbb",
|
| 230 |
+
"language": "MATLAB",
|
| 231 |
+
"lines": 47,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 5619
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "code/11)EEG_da/saveDaData.m",
|
| 238 |
+
"sha256": "90706f1275d052c62bdeb22da793fcf18ef3e0a06fdc3320ee8e03f79ef21133",
|
| 239 |
+
"language": "MATLAB",
|
| 240 |
+
"lines": 139,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 7537
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "code/11)EEG_da/saveSumAvgCz_p.m",
|
| 247 |
+
"sha256": "d47b58039cba889551ae554aa1736a260bb546acd93b997de742d823431d5760",
|
| 248 |
+
"language": "MATLAB",
|
| 249 |
+
"lines": 59,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 5707
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "code/11)EEG_da/snr_da.m",
|
| 256 |
+
"sha256": "e396c4d03f974f99bda36996142eeab4755439701387017150b41c2fe11885e3",
|
| 257 |
+
"language": "MATLAB",
|
| 258 |
+
"lines": 70,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 5997
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "code/12)EEG_mi3/loadEEG_mi3.m",
|
| 265 |
+
"sha256": "1ad0b21172797b7adb00c66408b4335f0e45f77aef9fa64e732d4cedb3b22b26",
|
| 266 |
+
"language": "MATLAB",
|
| 267 |
+
"lines": 24,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 4763
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "code/12)EEG_mi3/loadEEG_mi3_s.m",
|
| 274 |
+
"sha256": "5e43d617b2e68dab21c86ba5fbc7a49939bd5f8dbc57201aeb151b5a7f43f735",
|
| 275 |
+
"language": "MATLAB",
|
| 276 |
+
"lines": 28,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 19,
|
| 279 |
+
"row": 4935
|
| 280 |
+
},
|
| 281 |
+
{
|
| 282 |
+
"path": "code/12)EEG_mi3/mi3_f0_tracking.m",
|
| 283 |
+
"sha256": "dc5eeee25e2bbded2489ce98efcd0068fafbe56b82ac5862be13828ba5ff8b9e",
|
| 284 |
+
"language": "MATLAB",
|
| 285 |
+
"lines": 78,
|
| 286 |
+
"truncated": false,
|
| 287 |
+
"block": 19,
|
| 288 |
+
"row": 6303
|
| 289 |
+
},
|
| 290 |
+
{
|
| 291 |
+
"path": "code/12)EEG_mi3/mi3_f0_tracking_splitHalf.m",
|
| 292 |
+
"sha256": "c6074586079d2fe61b6c4f3d01b90c1a52803a433a58066129c7dc8cca6b5e5d",
|
| 293 |
+
"language": "MATLAB",
|
| 294 |
+
"lines": 92,
|
| 295 |
+
"truncated": false,
|
| 296 |
+
"block": 19,
|
| 297 |
+
"row": 6748
|
| 298 |
+
},
|
| 299 |
+
{
|
| 300 |
+
"path": "code/12)EEG_mi3/plotAllPartCorrs.m",
|
| 301 |
+
"sha256": "f7e7311d95dada39938ce3739b68c72c401a09d9013316b321aeaedaf40aaf08",
|
| 302 |
+
"language": "MATLAB",
|
| 303 |
+
"lines": 229,
|
| 304 |
+
"truncated": false,
|
| 305 |
+
"block": 19,
|
| 306 |
+
"row": 7734
|
| 307 |
+
},
|
| 308 |
+
{
|
| 309 |
+
"path": "code/12)EEG_mi3/plotMi3FFRexample.m",
|
| 310 |
+
"sha256": "f9b963db8f53739997e1120133741d0edb6c91db5ae8450bae123e879f18c914",
|
| 311 |
+
"language": "MATLAB",
|
| 312 |
+
"lines": 39,
|
| 313 |
+
"truncated": false,
|
| 314 |
+
"block": 19,
|
| 315 |
+
"row": 5195
|
| 316 |
+
},
|
| 317 |
+
{
|
| 318 |
+
"path": "code/12)EEG_mi3/plotMusAll.m",
|
| 319 |
+
"sha256": "f64fcc6934b09d796acb10dfb4e79e777d21dbf90760b2328c44fd5c4b1cba6d",
|
| 320 |
+
"language": "MATLAB",
|
| 321 |
+
"lines": 82,
|
| 322 |
+
"truncated": false,
|
| 323 |
+
"block": 19,
|
| 324 |
+
"row": 6458
|
| 325 |
+
},
|
| 326 |
+
{
|
| 327 |
+
"path": "code/12)EEG_mi3/plotMusicalAbility.m",
|
| 328 |
+
"sha256": "0038c73a61fb8e53d78f0982636a99ec7fcefc66b40fecff6b35b867561d6817",
|
| 329 |
+
"language": "MATLAB",
|
| 330 |
+
"lines": 167,
|
| 331 |
+
"truncated": false,
|
| 332 |
+
"block": 19,
|
| 333 |
+
"row": 7366
|
| 334 |
+
},
|
| 335 |
+
{
|
| 336 |
+
"path": "code/12)EEG_mi3/plotWithinSubjFFRs_mi3.m",
|
| 337 |
+
"sha256": "d3b31e23c860d91c2dd3faaa72a02a657047002bf3cced4a5ad0a496dae9930e",
|
| 338 |
+
"language": "MATLAB",
|
| 339 |
+
"lines": 63,
|
| 340 |
+
"truncated": false,
|
| 341 |
+
"block": 19,
|
| 342 |
+
"row": 6279
|
| 343 |
+
},
|
| 344 |
+
{
|
| 345 |
+
"path": "code/12)EEG_mi3/plot_daMi3_splitHalf.m",
|
| 346 |
+
"sha256": "e8a5516159a52dd5a292393a3d95b46fc1b233af735825d6bf1ca855a87937df",
|
| 347 |
+
"language": "MATLAB",
|
| 348 |
+
"lines": 191,
|
| 349 |
+
"truncated": false,
|
| 350 |
+
"block": 19,
|
| 351 |
+
"row": 7373
|
| 352 |
+
},
|
| 353 |
+
{
|
| 354 |
+
"path": "code/12)EEG_mi3/plot_mi3_da.m",
|
| 355 |
+
"sha256": "d3e80d064d31f827ce07ab10bf5b4787d2321f2c2024d12448d5fe25f6150fc1",
|
| 356 |
+
"language": "MATLAB",
|
| 357 |
+
"lines": 163,
|
| 358 |
+
"truncated": false,
|
| 359 |
+
"block": 19,
|
| 360 |
+
"row": 7248
|
| 361 |
+
},
|
| 362 |
+
{
|
| 363 |
+
"path": "code/12)EEG_mi3/plot_mi3_violin.m",
|
| 364 |
+
"sha256": "b135e5b920456077646cfa8e1dc078b14e74f7c6d776b16df8387a5b975b6558",
|
| 365 |
+
"language": "MATLAB",
|
| 366 |
+
"lines": 131,
|
| 367 |
+
"truncated": false,
|
| 368 |
+
"block": 19,
|
| 369 |
+
"row": 7035
|
| 370 |
+
},
|
| 371 |
+
{
|
| 372 |
+
"path": "code/12)EEG_mi3/preprocess_mi3.m",
|
| 373 |
+
"sha256": "c47f8b51c731a03467374db1c54bfa0d4fd206237df2a1896e216cd8dbafba77",
|
| 374 |
+
"language": "MATLAB",
|
| 375 |
+
"lines": 98,
|
| 376 |
+
"truncated": false,
|
| 377 |
+
"block": 19,
|
| 378 |
+
"row": 6625
|
| 379 |
+
},
|
| 380 |
+
{
|
| 381 |
+
"path": "code/12)EEG_mi3/preprocess_mi3_pilot.m",
|
| 382 |
+
"sha256": "d0ce86c0c46756d48a3b5dae83509da14d4ccdfe38154828290c8b1bf24cb7fc",
|
| 383 |
+
"language": "MATLAB",
|
| 384 |
+
"lines": 98,
|
| 385 |
+
"truncated": false,
|
| 386 |
+
"block": 19,
|
| 387 |
+
"row": 6635
|
| 388 |
+
},
|
| 389 |
+
{
|
| 390 |
+
"path": "code/12)EEG_mi3/preprocess_mi3_splitHalf.m",
|
| 391 |
+
"sha256": "87916d1966e80590549de9fb26e18956d6b572d23eb9dde8e89cce506e58fbe3",
|
| 392 |
+
"language": "MATLAB",
|
| 393 |
+
"lines": 98,
|
| 394 |
+
"truncated": false,
|
| 395 |
+
"block": 19,
|
| 396 |
+
"row": 6656
|
| 397 |
+
},
|
| 398 |
+
{
|
| 399 |
+
"path": "code/12)EEG_mi3/run_mi3.m",
|
| 400 |
+
"sha256": "7284bb353f960ab6ac488ecb4b848f5a1b7380fbe7d25cf1d16c36382e2e36e9",
|
| 401 |
+
"language": "MATLAB",
|
| 402 |
+
"lines": 156,
|
| 403 |
+
"truncated": false,
|
| 404 |
+
"block": 19,
|
| 405 |
+
"row": 7214
|
| 406 |
+
},
|
| 407 |
+
{
|
| 408 |
+
"path": "code/12)EEG_mi3/run_mi3_splitHalf.m",
|
| 409 |
+
"sha256": "8897b10e8ee6a1d6954e74dfb8b85484841f3fee0fb8ee77ae3475fc981d815c",
|
| 410 |
+
"language": "MATLAB",
|
| 411 |
+
"lines": 63,
|
| 412 |
+
"truncated": false,
|
| 413 |
+
"block": 19,
|
| 414 |
+
"row": 5981
|
| 415 |
+
},
|
| 416 |
+
{
|
| 417 |
+
"path": "code/12)EEG_mi3/run_withinPilot_mi3.m",
|
| 418 |
+
"sha256": "aca80378df1218a91f8378d8f3ac05fc9822d3fdb6f6f4c359a41c7078ff000e",
|
| 419 |
+
"language": "MATLAB",
|
| 420 |
+
"lines": 48,
|
| 421 |
+
"truncated": false,
|
| 422 |
+
"block": 19,
|
| 423 |
+
"row": 5677
|
| 424 |
+
},
|
| 425 |
+
{
|
| 426 |
+
"path": "code/12)EEG_mi3/saveMi3Data.m",
|
| 427 |
+
"sha256": "ccd5d691790f429f2bf3eb132f90d92ccd567614b73ba488018915025f6826ff",
|
| 428 |
+
"language": "MATLAB",
|
| 429 |
+
"lines": 93,
|
| 430 |
+
"truncated": false,
|
| 431 |
+
"block": 19,
|
| 432 |
+
"row": 7093
|
| 433 |
+
},
|
| 434 |
+
{
|
| 435 |
+
"path": "code/12)EEG_mi3/saveSumAvgCz_mi3_p.m",
|
| 436 |
+
"sha256": "295631c8296ee74aa7302847a095ae42b958915ce391be88fd5cbb5ca567cc30",
|
| 437 |
+
"language": "MATLAB",
|
| 438 |
+
"lines": 60,
|
| 439 |
+
"truncated": false,
|
| 440 |
+
"block": 19,
|
| 441 |
+
"row": 5725
|
| 442 |
+
},
|
| 443 |
+
{
|
| 444 |
+
"path": "code/12)EEG_mi3/snr_mi3.m",
|
| 445 |
+
"sha256": "9bf7b1406b1e803822cd6486e4d2f95ce64ace791a545afe4a64636992d4c6b9",
|
| 446 |
+
"language": "MATLAB",
|
| 447 |
+
"lines": 71,
|
| 448 |
+
"truncated": false,
|
| 449 |
+
"block": 19,
|
| 450 |
+
"row": 5989
|
| 451 |
+
},
|
| 452 |
+
{
|
| 453 |
+
"path": "code/AnalysisFunctions/Violinplot-Matlab-master/Violin.m",
|
| 454 |
+
"sha256": "be484036c2cc2964acdda099f9b9b2a41e2ee8e5a26e8b63ac21c97dfaa64b09",
|
| 455 |
+
"language": "MATLAB",
|
| 456 |
+
"lines": 721,
|
| 457 |
+
"truncated": false,
|
| 458 |
+
"block": 19,
|
| 459 |
+
"row": 8274
|
| 460 |
+
},
|
| 461 |
+
{
|
| 462 |
+
"path": "code/AnalysisFunctions/Violinplot-Matlab-master/readme_figures.m",
|
| 463 |
+
"sha256": "83fecb3145112e4873c1455fdf25534b13ddeb9957e02cce59db12f5bb0fa5eb",
|
| 464 |
+
"language": "MATLAB",
|
| 465 |
+
"lines": 96,
|
| 466 |
+
"truncated": false,
|
| 467 |
+
"block": 19,
|
| 468 |
+
"row": 5982
|
| 469 |
+
},
|
| 470 |
+
{
|
| 471 |
+
"path": "code/AnalysisFunctions/Violinplot-Matlab-master/test_cases/testviolinplot.m",
|
| 472 |
+
"sha256": "a4e968be05db3320dc752a3eb7748cc06d12c48f33a1e7ad4c5dd9ccd0270eef",
|
| 473 |
+
"language": "MATLAB",
|
| 474 |
+
"lines": 87,
|
| 475 |
+
"truncated": false,
|
| 476 |
+
"block": 6,
|
| 477 |
+
"row": 11634
|
| 478 |
+
},
|
| 479 |
+
{
|
| 480 |
+
"path": "code/AnalysisFunctions/Violinplot-Matlab-master/violinplot.m",
|
| 481 |
+
"sha256": "96ea3c9d3b49c52f232bff210cd54cc8d1a11d13d0ab57d47e7babc626173f0c",
|
| 482 |
+
"language": "MATLAB",
|
| 483 |
+
"lines": 193,
|
| 484 |
+
"truncated": false,
|
| 485 |
+
"block": 19,
|
| 486 |
+
"row": 7457
|
| 487 |
+
},
|
| 488 |
+
{
|
| 489 |
+
"path": "code/AnalysisFunctions/calcRegOnly.m",
|
| 490 |
+
"sha256": "021a367c27460c0aa32551dc0b12215d9f3273432a3a65b2697fe4fe193250ae",
|
| 491 |
+
"language": "MATLAB",
|
| 492 |
+
"lines": 15,
|
| 493 |
+
"truncated": false,
|
| 494 |
+
"block": 19,
|
| 495 |
+
"row": 4506
|
| 496 |
+
},
|
| 497 |
+
{
|
| 498 |
+
"path": "code/AnalysisFunctions/dataFFT.m",
|
| 499 |
+
"sha256": "01278d714c8a182f8df1822cd81e06d092e93417552d83cbc57fda2fb28bbeff",
|
| 500 |
+
"language": "MATLAB",
|
| 501 |
+
"lines": 65,
|
| 502 |
+
"truncated": false,
|
| 503 |
+
"block": 19,
|
| 504 |
+
"row": 6080
|
| 505 |
+
},
|
| 506 |
+
{
|
| 507 |
+
"path": "code/AnalysisFunctions/filtEEG.m",
|
| 508 |
+
"sha256": "b65089a4fe3d3ecefbc14c9a1015086b197179352cddf583f88747a6daa1b247",
|
| 509 |
+
"language": "MATLAB",
|
| 510 |
+
"lines": 66,
|
| 511 |
+
"truncated": false,
|
| 512 |
+
"block": 19,
|
| 513 |
+
"row": 6114
|
| 514 |
+
},
|
| 515 |
+
{
|
| 516 |
+
"path": "code/AnalysisFunctions/grabOneField.m",
|
| 517 |
+
"sha256": "44c62dde4c1ee3488d49748b51c80dcc0827192886efed5b9327f25b90d2f677",
|
| 518 |
+
"language": "MATLAB",
|
| 519 |
+
"lines": 20,
|
| 520 |
+
"truncated": false,
|
| 521 |
+
"block": 19,
|
| 522 |
+
"row": 4949
|
| 523 |
+
},
|
| 524 |
+
{
|
| 525 |
+
"path": "code/AnalysisFunctions/hann.m",
|
| 526 |
+
"sha256": "2b486dbebff4d70ccda72ac562c6e80a9b29c8364563bfd2e5242b0d1e3f5f13",
|
| 527 |
+
"language": "MATLAB",
|
| 528 |
+
"lines": 29,
|
| 529 |
+
"truncated": false,
|
| 530 |
+
"block": 19,
|
| 531 |
+
"row": 4915
|
| 532 |
+
},
|
| 533 |
+
{
|
| 534 |
+
"path": "code/AnalysisFunctions/matchDataExps.m",
|
| 535 |
+
"sha256": "727e7f27e4b780d026610cf23b741ecca907b08d958aa70ce39ffeed7f8db9df",
|
| 536 |
+
"language": "MATLAB",
|
| 537 |
+
"lines": 103,
|
| 538 |
+
"truncated": false,
|
| 539 |
+
"block": 19,
|
| 540 |
+
"row": 6774
|
| 541 |
+
},
|
| 542 |
+
{
|
| 543 |
+
"path": "code/AnalysisFunctions/matchDataNew.m",
|
| 544 |
+
"sha256": "0deb75eedd05a98fbff2b33c0e9f4c2d9bbb9baaaf461327af8a8346fbae93d4",
|
| 545 |
+
"language": "MATLAB",
|
| 546 |
+
"lines": 53,
|
| 547 |
+
"truncated": false,
|
| 548 |
+
"block": 19,
|
| 549 |
+
"row": 5858
|
| 550 |
+
},
|
| 551 |
+
{
|
| 552 |
+
"path": "code/AnalysisFunctions/plotTime.m",
|
| 553 |
+
"sha256": "8c77500433946285b3cac6d2785e1adf7b1717b8ec690131c64a552c68c829b5",
|
| 554 |
+
"language": "MATLAB",
|
| 555 |
+
"lines": 47,
|
| 556 |
+
"truncated": false,
|
| 557 |
+
"block": 19,
|
| 558 |
+
"row": 5010
|
| 559 |
+
},
|
| 560 |
+
{
|
| 561 |
+
"path": "code/AnalysisFunctions/plotTimeWithBaseline.m",
|
| 562 |
+
"sha256": "7eb38520a73c411d4c4a5b9cc1167653dd0284a5e7cf56db0f5a163e6bac2449",
|
| 563 |
+
"language": "MATLAB",
|
| 564 |
+
"lines": 38,
|
| 565 |
+
"truncated": false,
|
| 566 |
+
"block": 19,
|
| 567 |
+
"row": 4969
|
| 568 |
+
},
|
| 569 |
+
{
|
| 570 |
+
"path": "code/AnalysisFunctions/preprocess_modified.m",
|
| 571 |
+
"sha256": "f3e21de172d2e13de32e3031bbf012c460e4c489d33b50c21a3c0105e0752e7b",
|
| 572 |
+
"language": "MATLAB",
|
| 573 |
+
"lines": 158,
|
| 574 |
+
"truncated": false,
|
| 575 |
+
"block": 19,
|
| 576 |
+
"row": 7488
|
| 577 |
+
},
|
| 578 |
+
{
|
| 579 |
+
"path": "code/AnalysisFunctions/preprocess_modified_splitHalf.m",
|
| 580 |
+
"sha256": "8fc43d4357ce128241ddd397909c35f7e29dfe62445f966006f503b70858bccc",
|
| 581 |
+
"language": "MATLAB",
|
| 582 |
+
"lines": 193,
|
| 583 |
+
"truncated": false,
|
| 584 |
+
"block": 19,
|
| 585 |
+
"row": 7640
|
| 586 |
+
},
|
| 587 |
+
{
|
| 588 |
+
"path": "code/AnalysisFunctions/rmvSubjs.m",
|
| 589 |
+
"sha256": "7023c6d0c62ed558f4ef09d3c24c364050e76a24bba9ee2426e53a6a5efdbad9",
|
| 590 |
+
"language": "MATLAB",
|
| 591 |
+
"lines": 10,
|
| 592 |
+
"truncated": false,
|
| 593 |
+
"block": 19,
|
| 594 |
+
"row": 4469
|
| 595 |
+
},
|
| 596 |
+
{
|
| 597 |
+
"path": "code/AnalysisFunctions/setFigureDefaults.m",
|
| 598 |
+
"sha256": "065bc5f348f42a9395350586abdacb73a3069e50f3ea3624d77929e6d44f451e",
|
| 599 |
+
"language": "MATLAB",
|
| 600 |
+
"lines": 17,
|
| 601 |
+
"truncated": false,
|
| 602 |
+
"block": 19,
|
| 603 |
+
"row": 4818
|
| 604 |
+
},
|
| 605 |
+
{
|
| 606 |
+
"path": "code/AnalysisFunctions/siteCode.m",
|
| 607 |
+
"sha256": "bd9f27a33243304f2776d1e91a57d206ffd85984135b48cf2ea68aef8db838b7",
|
| 608 |
+
"language": "MATLAB",
|
| 609 |
+
"lines": 19,
|
| 610 |
+
"truncated": false,
|
| 611 |
+
"block": 19,
|
| 612 |
+
"row": 4588
|
| 613 |
+
},
|
| 614 |
+
{
|
| 615 |
+
"path": "code/AnalysisFunctions/siteCounts.m",
|
| 616 |
+
"sha256": "adf2fce6160a600c526781e4d8fb2bac6d0db924ac5f95b108ba568ec9680aa6",
|
| 617 |
+
"language": "MATLAB",
|
| 618 |
+
"lines": 18,
|
| 619 |
+
"truncated": false,
|
| 620 |
+
"block": 19,
|
| 621 |
+
"row": 4581
|
| 622 |
+
},
|
| 623 |
+
{
|
| 624 |
+
"path": "code/AnalysisFunctions/slidingFFT_mi3.m",
|
| 625 |
+
"sha256": "223d257432812cb4c4c88bfd9586109c936ce96c7750e80c2dee50766e2f3abc",
|
| 626 |
+
"language": "MATLAB",
|
| 627 |
+
"lines": 121,
|
| 628 |
+
"truncated": false,
|
| 629 |
+
"block": 19,
|
| 630 |
+
"row": 7180
|
| 631 |
+
},
|
| 632 |
+
{
|
| 633 |
+
"path": "code/AnalysisFunctions/slidingFFT_mi3_s.m",
|
| 634 |
+
"sha256": "5258b1006046de6207b34b9838dcc106f7e051801019f8b27e79a182e870bbac",
|
| 635 |
+
"language": "MATLAB",
|
| 636 |
+
"lines": 124,
|
| 637 |
+
"truncated": false,
|
| 638 |
+
"block": 19,
|
| 639 |
+
"row": 7205
|
| 640 |
+
},
|
| 641 |
+
{
|
| 642 |
+
"path": "code/run_everything.m",
|
| 643 |
+
"sha256": "10d8c96c22cefb2770d086d09f794745f99eaa8cb3e47ac33070d842236dad71",
|
| 644 |
+
"language": "MATLAB",
|
| 645 |
+
"lines": 40,
|
| 646 |
+
"truncated": false,
|
| 647 |
+
"block": 19,
|
| 648 |
+
"row": 4589
|
| 649 |
+
}
|
| 650 |
+
]
|
| 651 |
+
}
|
manifests/1a/gitlab.com__tommyclausner__meglyon-experiment-runner.json
ADDED
|
@@ -0,0 +1,183 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "gitlab.com/tommyclausner/meglyon-experiment-runner",
|
| 4 |
+
"url": "https://gitlab.com/TommyClausner/meglyon-experiment-runner",
|
| 5 |
+
"host": "gitlab.com",
|
| 6 |
+
"commit": "3142259d00c028187537b91c54fe6151f49f31fc",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "5a888fe066a2ce9d16c718c5a2d6781a0898ba5f7546b22df7cb39ef1030b5b9",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 674,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4301
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "c26228dfec71cbda4dd24f5bab1d501b56d7ebb4f953b27f29b6e2d94e35c7a6",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 17,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16003
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "experiments/PsychoPy/beh_pilot_V85P85_lastrun.py",
|
| 31 |
+
"sha256": "46719184a2cb1d9748af519901d0bc589e5c6dcab813ae729fe6e57404c81d9c",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 2256,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 14632
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "experiments/PsychoPy/practice_att_MEG_v0.py",
|
| 40 |
+
"sha256": "bb47fd1ad915e7af3e48baba3af2524e1076fce8c7d342fecf57be841b665eef",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 1073,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 14569
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "experiments/PsychoPy/practice_att_MEG_v1.py",
|
| 49 |
+
"sha256": "96882be306bf3714e9f6cd5b63804e582cd6d4a921aa6d4dbc59bac15b0f0df0",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 1072,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 14568
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "extract_staircase.py",
|
| 58 |
+
"sha256": "60b4f1e997a9cd79a81deb3eb6647d30da0619ec026a237c79a71f710d40d0fe",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 41,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 9283
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "meglyoner.py",
|
| 67 |
+
"sha256": "82fca9f19676b894f2fd4bbcb74ba95f99fff8643e71f12501c7e620dc6acf3d",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 136,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 11709
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "meglyoner/__init__.py",
|
| 76 |
+
"sha256": "12fa21174885e33cd0070029baf40e8a8ae87fc625994a9b200f6e2873890b08",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 5,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 8582
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "meglyoner/experiment.py",
|
| 85 |
+
"sha256": "691a60804523d6225c71dfb9d6943a643053a2e1bfa4a4811cbde8c29ef2106d",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 1386,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 14570
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "meglyoner/eyelink.py",
|
| 94 |
+
"sha256": "de85076b22b5321ba3f7dfc92894e42fc9beffcd6e36577f1f6b1957a09c1e69",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 21,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 9052
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "meglyoner/generate.py",
|
| 103 |
+
"sha256": "5f259f6a054280a751249b410fc31e264d9bd81d0565c3e08e6cc47864c08f7c",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 2826,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 14629
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "meglyoner/interface.py",
|
| 112 |
+
"sha256": "193c1a1259aca8f7abfdcd80a0cbde6dc068c6bd8a2670d1cd7e73c7b0dea4d8",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 192,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 12103
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "new_session.py",
|
| 121 |
+
"sha256": "1c0dce7b6e5d5dad1f78a9a9339f83eb1a5b64f0af156141abfa3e5c76a7671b",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 103,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 10923
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "run_attention.py",
|
| 130 |
+
"sha256": "8a94673f0f95a8826543db835c0d30c403a9b5ec7a9ead59235d108a96d76272",
|
| 131 |
+
"language": "Python",
|
| 132 |
+
"lines": 81,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 10130
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "run_faces.py",
|
| 139 |
+
"sha256": "de983593ff6fae69b79f8ef58c392c87dbb8a32a84ca864d7aa5cd0f05f41a7f",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 80,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 10112
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "run_localiser.py",
|
| 148 |
+
"sha256": "f52c14c8dd834c295c86abec7de043fa6e0a5df43b138e7a4b76398dc0f24428",
|
| 149 |
+
"language": "Python",
|
| 150 |
+
"lines": 99,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 10642
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "run_prediction.py",
|
| 157 |
+
"sha256": "acb50fb83ebfdcb85d527897260b7aecfa601141dd73f002d0e3388bfb989dc1",
|
| 158 |
+
"language": "Python",
|
| 159 |
+
"lines": 47,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 9353
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "run_resting.py",
|
| 166 |
+
"sha256": "f32a7ff09bae69d834112e7bf61e66ac3d8a59a963f99ea9d0faea691038eb8e",
|
| 167 |
+
"language": "Python",
|
| 168 |
+
"lines": 85,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 10239
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "setup.py",
|
| 175 |
+
"sha256": "40037ac069e6454dd560198bb522eb4ee5f95e3c0d4105a5d81dafb88e6fef96",
|
| 176 |
+
"language": "Python",
|
| 177 |
+
"lines": 82,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 9804
|
| 181 |
+
}
|
| 182 |
+
]
|
| 183 |
+
}
|
manifests/1a/zenodo__15478572.json
ADDED
|
@@ -0,0 +1,84 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:15478572",
|
| 4 |
+
"url": "https://zenodo.org/records/15478572",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "Code_R_Scripts.zip/Behavioural_Data_LMEM_Exp2_LVExp_Rainclouds.R",
|
| 13 |
+
"sha256": "d7e577fbdc9d9ab8be6aae208ee021997747b6eeaa909f34b0a3ea5ff4332f32",
|
| 14 |
+
"language": "R",
|
| 15 |
+
"lines": 395,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 15112
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "Code_R_Scripts.zip/LMEM_Analysis_ERP_Data_Exp2_LVExp.R",
|
| 22 |
+
"sha256": "7960e7e8f7ca01164a7a33a5b173a129545acde504f19247416147cb616e9287",
|
| 23 |
+
"language": "R",
|
| 24 |
+
"lines": 257,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 15053
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "Code_R_Scripts.zip/LMEM_Analysis_ERP_Data_Exp2_LVExp_NP.R",
|
| 31 |
+
"sha256": "1984c13b69d807a8f636b1209ab5b4b0f38e190369bb86738de89fb2ad9c774f",
|
| 32 |
+
"language": "R",
|
| 33 |
+
"lines": 205,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 14988
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "Code_R_Scripts.zip/R_ERP_Helper_Functions.R",
|
| 40 |
+
"sha256": "e18253c07bdf92f69c906bf734a189ea13cdb325b9e63bce99456c9a3fe34b47",
|
| 41 |
+
"language": "R",
|
| 42 |
+
"lines": 892,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 15189
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "Code_R_Scripts.zip/R_ERP_Include_Exp_Conditions_Exp2.R",
|
| 49 |
+
"sha256": "759422c00b4dcfdefe194b512805bc24a874532685c109d90baa5d6e3ff7b030",
|
| 50 |
+
"language": "R",
|
| 51 |
+
"lines": 97,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 14905
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "Code_R_Scripts.zip/R_ERP_Pipeline_eeguana_E2.R",
|
| 58 |
+
"sha256": "a5611d50c6f0602959c2163851b02b16d4a49ca7ee46c7015ba9763008d28562",
|
| 59 |
+
"language": "R",
|
| 60 |
+
"lines": 301,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 15072
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "Code_R_Scripts.zip/R_LMEM_Helper_Functions.R",
|
| 67 |
+
"sha256": "4bef9f7a4f9122771fea2591e4db590c62d20695a4749f4858350cca73246bae",
|
| 68 |
+
"language": "R",
|
| 69 |
+
"lines": 170,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 14984
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "Code_R_Scripts.zip/R_Rainclouds.R",
|
| 76 |
+
"sha256": "5bcf5401388deef67e6780d143c197c1bc43303a0f7f730f378801ab96a7e203",
|
| 77 |
+
"language": "R",
|
| 78 |
+
"lines": 92,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 14816
|
| 82 |
+
}
|
| 83 |
+
]
|
| 84 |
+
}
|
manifests/1b/github.com__lizhang30__gpcndta.json
ADDED
|
@@ -0,0 +1,264 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/lizhang30/gpcndta",
|
| 4 |
+
"url": "https://github.com/LiZhang30/GPCNDTA/tree/main/data",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "4d2a5c6d9a4a61bbbf426c68db4324f23ada4fdc",
|
| 7 |
+
"license": "Apache-2.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE.txt",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE.txt",
|
| 13 |
+
"sha256": "c71d239df91726fc519c6eb72d318ec65820627232b2f796219e87dcf35d0ab4",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 201,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2216
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "c4eace84c44b85c1684d57aba6167366a095a081f18a27e1661239f30b27cd51",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 106,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16149
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "cpu/__init__.py",
|
| 31 |
+
"sha256": "c616a50744d73f770761b2553ce4485c36d421c1b4a370464e2e4f01ad0e3364",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 12,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 8849
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "cpu/config_parser.py",
|
| 40 |
+
"sha256": "10ac94be41a362b51aace318185f3e566d87a8ad3358f38cee56bcdf9fe5bd11",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 65,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 10058
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "cpu/distributed.py",
|
| 49 |
+
"sha256": "cc8dc10e4c693913265a63c43fa5752b625323d79cee46b2e3453c26ee05c60f",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 217,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 12674
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "cpu/history_buffer.py",
|
| 58 |
+
"sha256": "d68656eb512e869de4e3cf2f39a6ef2348542a49510f1a4c3874d60c129a3a34",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 54,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 9510
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "cpu/hooks/__init__.py",
|
| 67 |
+
"sha256": "49a78d8e75100e1f1a6034438e439a0f948f76be5581afa6285fe594f964b129",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 8,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 8789
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "cpu/hooks/checkpoint_hook.py",
|
| 76 |
+
"sha256": "a4c6e0a273c282ed6f005a0d6b1241e2b10e88ca24c3aee422988c8684d44a27",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 45,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 9676
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "cpu/hooks/distributed_hook.py",
|
| 85 |
+
"sha256": "24b11471c9e0b67f4abaab38a4cee7dd1c56c0e9b79d0da6c5745ed054c4f955",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 13,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 8978
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "cpu/hooks/eval_hook.py",
|
| 94 |
+
"sha256": "ede7c9325edb4b85eb63ae2b1c7fb3df15225a1608a1c828e52316fe37aaf7b3",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 40,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 9410
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "cpu/hooks/hookbase.py",
|
| 103 |
+
"sha256": "7e8385f24b0c0cb89115766bc1293856630f2accf9504bd2567ab8dbfa5404f4",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 97,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 10452
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "cpu/hooks/logger_hook.py",
|
| 112 |
+
"sha256": "4daa6d520356434095f8ba3723801c3825dd09b68eaed3b56807f094e4500e2f",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 98,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 11180
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "cpu/hooks/lr_update_hook.py",
|
| 121 |
+
"sha256": "ae8c4b8ff348a6ef52157bee4bd115b3ae2b173d6993d7cd9c9daeb277a27d47",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 43,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 9616
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "cpu/logger.py",
|
| 130 |
+
"sha256": "45a6fc0387d558efc0238d9ecf82ac969c9ff0dd11ba2042f264a1763c9bfb78",
|
| 131 |
+
"language": "Python",
|
| 132 |
+
"lines": 75,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 10292
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "cpu/lr_scheduler.py",
|
| 139 |
+
"sha256": "02655bbf99c9c94d74d96f233a1ec9481a8761080bdc4cb9f94755b503f45f3c",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 182,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 12779
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "cpu/misc.py",
|
| 148 |
+
"sha256": "91f12343d11ab9275bc4e9f85c72ed99bb768bc6ed10f4da14d45f1ff42e6b10",
|
| 149 |
+
"language": "Python",
|
| 150 |
+
"lines": 99,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 10401
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "cpu/trainer.py",
|
| 157 |
+
"sha256": "c820e5af84471d9abeb4eb58662336ef3ae759352f32bd80ded19b222c7c8c4a",
|
| 158 |
+
"language": "Python",
|
| 159 |
+
"lines": 529,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 14173
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "model/CensNet_layer.py",
|
| 166 |
+
"sha256": "d37cf3829a1112112c0b53b9c4f8ada81e8606ec399a8faff631d2fae81879c5",
|
| 167 |
+
"language": "Python",
|
| 168 |
+
"lines": 78,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 10690
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "model/CensNet_model.py",
|
| 175 |
+
"sha256": "4a235be493db93b02ceaf56ed573159c5072f14f2f09bf338dfb965df42bc317",
|
| 176 |
+
"language": "Python",
|
| 177 |
+
"lines": 58,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 9986
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "model/GraphModel.py",
|
| 184 |
+
"sha256": "320f9d7e276c919e7f76d6709181842c7cc5f8b598e56a5f526e8c7f544f83e1",
|
| 185 |
+
"language": "Python",
|
| 186 |
+
"lines": 415,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 13974
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "train.py",
|
| 193 |
+
"sha256": "c61b8050164bb8f5f1cc8d5c7dd3f9d1a819ec82be521bdd7ad354c816761625",
|
| 194 |
+
"language": "Python",
|
| 195 |
+
"lines": 247,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 13860
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "utils/ContactMap.py",
|
| 202 |
+
"sha256": "b56ec633732841876f21f9f1d9c6a32f408c917c1f6620d105f487dd37df94fc",
|
| 203 |
+
"language": "Python",
|
| 204 |
+
"lines": 153,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 11802
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "utils/DataHelper.py",
|
| 211 |
+
"sha256": "4db227b4d3dadb8420e1cd0c362cf21a53d16fa7f2abed5078005a6df90761ca",
|
| 212 |
+
"language": "Python",
|
| 213 |
+
"lines": 305,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 13544
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "utils/DglOperator.py",
|
| 220 |
+
"sha256": "fd7bb7671a470400fafd9b4b941bbf99d49c26bb7e6b167b8eea1d529183bfee",
|
| 221 |
+
"language": "Python",
|
| 222 |
+
"lines": 96,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 10989
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "utils/DrugGraph.py",
|
| 229 |
+
"sha256": "f761b05955993757693b857a67b557441f28787d4a4dad34d0d0aaf4215fbe2e",
|
| 230 |
+
"language": "Python",
|
| 231 |
+
"lines": 114,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 11718
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "utils/Emetrics.py",
|
| 238 |
+
"sha256": "34774cf750e046678077cc231b69df9aa5ac4c1d600476034049026f2bac71ef",
|
| 239 |
+
"language": "Python",
|
| 240 |
+
"lines": 113,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 10241
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "utils/Pharmacophore.py",
|
| 247 |
+
"sha256": "6a5ffec74ce96b79a23287381aa10cc7ccd921e971e00313fe2937fba8377018",
|
| 248 |
+
"language": "Python",
|
| 249 |
+
"lines": 104,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 10542
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "utils/TargetGraph.py",
|
| 256 |
+
"sha256": "63af9f91c37476b1ca7800d943b7cba2adf1a98bef9ddebbc8499a140f9e4e9b",
|
| 257 |
+
"language": "Python",
|
| 258 |
+
"lines": 213,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 13133
|
| 262 |
+
}
|
| 263 |
+
]
|
| 264 |
+
}
|
manifests/1b/github.com__soffiafdz__hvr_validation.json
ADDED
|
@@ -0,0 +1,570 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/soffiafdz/hvr_validation",
|
| 4 |
+
"url": "https://github.com/soffiafdz/hvr_validation",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "0ed046656c41935865ab98acb5279c9a4419b2f5",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 674,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2235
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "ed82498cd9659bacb4bdfbb6fcb92ef1f5aa5c94b2e7c3d022eae585eea0e074",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 345,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16194
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "code/analysis/adjust_hc-hvr_adni-bl.R",
|
| 31 |
+
"sha256": "a6f2004238d5dfa3e998a25ec0b3f3837212f18ca7479cc35701fe5768010df5",
|
| 32 |
+
"language": "R",
|
| 33 |
+
"lines": 172,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 14878
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "code/analysis/compare_adni-bl.R",
|
| 40 |
+
"sha256": "b6b15954c686031b9c8fcd772d1dcb199c776a91c587d5b5b264270ce0bcabeb",
|
| 41 |
+
"language": "R",
|
| 42 |
+
"lines": 495,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 15071
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "code/analysis/compare_man-seg.R",
|
| 49 |
+
"sha256": "35a0da32462c2a4712566dba64d5b73260a03c70bc425a76029dc9ab43caf268",
|
| 50 |
+
"language": "R",
|
| 51 |
+
"lines": 1245,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 15175
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "code/analysis/correlate_age-memory_adni-bl.R",
|
| 58 |
+
"sha256": "3d5aef002d98ee3e9ed22eea18e94062bc9f8c8cc29961043553d73abe585faf",
|
| 59 |
+
"language": "R",
|
| 60 |
+
"lines": 575,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 15080
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "code/backend/calculate_kappa_man-seg_fs.sh",
|
| 67 |
+
"sha256": "16171248e03f7288dfd0726030284fde8949334f7cd2a4122bce7f9ac8d386ac",
|
| 68 |
+
"language": "Shell",
|
| 69 |
+
"lines": 55,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 15574
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "code/backend/compare_cnns_adni-bl.sh",
|
| 76 |
+
"sha256": "9465c4f617df1729953915cf5a5128240c43250dc641f5742a477e75be45f5cd",
|
| 77 |
+
"language": "Shell",
|
| 78 |
+
"lines": 46,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 15606
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "code/backend/compare_man-seg.sh",
|
| 85 |
+
"sha256": "6b4873e537ec75be0c19c57f691ff7ac59c5e46eb417cc82fa516bdccb7e74d8",
|
| 86 |
+
"language": "Shell",
|
| 87 |
+
"lines": 97,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 15698
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "code/backend/compare_man-seg_validation.sh",
|
| 94 |
+
"sha256": "29752f7aa8c07a28f9f8dbdf624e780ff38cc62937e8f301ce156fe3672216be",
|
| 95 |
+
"language": "Shell",
|
| 96 |
+
"lines": 119,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 15713
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "code/backend/compile_figures.sh",
|
| 103 |
+
"sha256": "ec8b643e317c4c24026ebe4b66d41c0ec087f707cbc5972aeb9a6da604837ff6",
|
| 104 |
+
"language": "Shell",
|
| 105 |
+
"lines": 71,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 15667
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "code/backend/compile_figures_txt.sh",
|
| 112 |
+
"sha256": "ec8b643e317c4c24026ebe4b66d41c0ec087f707cbc5972aeb9a6da604837ff6",
|
| 113 |
+
"language": "Shell",
|
| 114 |
+
"lines": 71,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 15667
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "code/backend/compile_figures_word.R",
|
| 121 |
+
"sha256": "266b4ffd5b10f3c9f40f2d8d9b91e7a8e488dd6b6d78baaf6e6cace6ff924abf",
|
| 122 |
+
"language": "R",
|
| 123 |
+
"lines": 99,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 14799
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "code/backend/compile_supplementaries.sh",
|
| 130 |
+
"sha256": "c381fa79c2d79fe13b277d92bde7ef8daee5626115acfa35ebe8adb01ee9324a",
|
| 131 |
+
"language": "Shell",
|
| 132 |
+
"lines": 160,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 15780
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "code/backend/compile_tables.sh",
|
| 139 |
+
"sha256": "5fd63dbc9108ac6f4491aa3368de4920a6aa525e9f61cba9e7393f2e4f8111ba",
|
| 140 |
+
"language": "Shell",
|
| 141 |
+
"lines": 96,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 15703
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "code/backend/compile_tables_word.R",
|
| 148 |
+
"sha256": "19cc64911aa9962b9b1933224e6a367a461a980e9a8b2b3c1a5e59a8788854ca",
|
| 149 |
+
"language": "R",
|
| 150 |
+
"lines": 82,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 14777
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "code/backend/create_list_adni_baseline.sh",
|
| 157 |
+
"sha256": "70e62bcfbb8340d48395ddf4b3ebb672e45891e9acbd9db1c333b5da5c124e35",
|
| 158 |
+
"language": "Shell",
|
| 159 |
+
"lines": 19,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 15411
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "code/backend/create_list_adni_preproc.sh",
|
| 166 |
+
"sha256": "59204af36421090ddd56d93a4828fbf27ace8f51c5dacb6c9bc6af1574ffd05a",
|
| 167 |
+
"language": "Shell",
|
| 168 |
+
"lines": 31,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 15469
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "code/backend/extract_icc_scale-factor_adni-bl.sh",
|
| 175 |
+
"sha256": "2243626f5c9669f65c0d4a1d81c9068109fe9e1736f7aeee661179d3cdc01fbc",
|
| 176 |
+
"language": "Shell",
|
| 177 |
+
"lines": 36,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 15480
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "code/backend/extract_scanner_adni-bl.sh",
|
| 184 |
+
"sha256": "a214dc6d61ac292dbe5e72d7ca9a70b5d585c025d6df3b69ece00e22a2ffab68",
|
| 185 |
+
"language": "Shell",
|
| 186 |
+
"lines": 26,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 15434
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "code/backend/extract_volumes_hcvc-ag.sh",
|
| 193 |
+
"sha256": "20a2114d14c3054498ab095e8bfcaad5d0d266fde09018ae3ecc3de82569b0c2",
|
| 194 |
+
"language": "Shell",
|
| 195 |
+
"lines": 57,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 15660
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "code/backend/extract_volumes_hcvc.sh",
|
| 202 |
+
"sha256": "b9936d6bb434d380fd51b96bcc5c22efad42813201346ae01ed88b0ff2768d51",
|
| 203 |
+
"language": "Shell",
|
| 204 |
+
"lines": 46,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 15527
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "code/backend/fill_qc-dirs_adni-bl.sh",
|
| 211 |
+
"sha256": "5d7a4af5f0683d7962e47bcb80a266587211dd2e6dbb2a3b1ac77ec65dc26a61",
|
| 212 |
+
"language": "Shell",
|
| 213 |
+
"lines": 32,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 15474
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "code/backend/get_brainmask_qc-images.sh",
|
| 220 |
+
"sha256": "2e0b129c64328938464982740fd94575c18a21222eee63a6a0af70376d5f3749",
|
| 221 |
+
"language": "Shell",
|
| 222 |
+
"lines": 28,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 15437
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "code/backend/link_files_adni-bl.sh",
|
| 229 |
+
"sha256": "e4f52742eeee5fc729b6b5a0f5e2548e8113e7e8e7636b47ab4f9310f3944c79",
|
| 230 |
+
"language": "Shell",
|
| 231 |
+
"lines": 31,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 15464
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "code/backend/relabel_cnn_hcvc-ag_hcvc.sh",
|
| 238 |
+
"sha256": "7a1672ee9a68dc7ef97e6f932e0d6a1c142d65e4b6387ab7fb9debd0f3e7fb5a",
|
| 239 |
+
"language": "Shell",
|
| 240 |
+
"lines": 19,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 15372
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "code/backend/resample_segmentations_adni-bl_nlpb.sh",
|
| 247 |
+
"sha256": "839f51a99864c622d5df20fe61613d97363e0edd710311d75b0b7e0eca4aa3fa",
|
| 248 |
+
"language": "Shell",
|
| 249 |
+
"lines": 39,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 15453
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "code/data_parsing/extract_demog_adni-bl.R",
|
| 256 |
+
"sha256": "5ab570e2a7c45ec767a29cc1120e52a5c66bd78a353c73b82ebb03d70fe4b5b1",
|
| 257 |
+
"language": "R",
|
| 258 |
+
"lines": 321,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 15000
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "code/data_parsing/parse_adnimerge-bl.R",
|
| 265 |
+
"sha256": "d9337454db5f9b7b159caf625ebfe499fb3f9a912edb30878a0e871fe01e4290",
|
| 266 |
+
"language": "R",
|
| 267 |
+
"lines": 93,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 14786
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "code/data_parsing/parse_freesurfer-vols.R",
|
| 274 |
+
"sha256": "f88df51f97de2962a965409d41bb9a1b45b3d420483017f7c44aa21c92da8bd8",
|
| 275 |
+
"language": "R",
|
| 276 |
+
"lines": 148,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 19,
|
| 279 |
+
"row": 14856
|
| 280 |
+
},
|
| 281 |
+
{
|
| 282 |
+
"path": "code/data_parsing/qc_segmentations_adni-bl.R",
|
| 283 |
+
"sha256": "fb925488cafd50a3d21b94114bb66f5a42a021535780a9f3666ad92aca30b3e7",
|
| 284 |
+
"language": "R",
|
| 285 |
+
"lines": 143,
|
| 286 |
+
"truncated": false,
|
| 287 |
+
"block": 19,
|
| 288 |
+
"row": 14837
|
| 289 |
+
},
|
| 290 |
+
{
|
| 291 |
+
"path": "code/qc/qc_plot.pl",
|
| 292 |
+
"sha256": "497ab1c08db76a9aa03cd5c4cb80b699331a0bda19522c65e4313561d57986ad",
|
| 293 |
+
"language": "Perl",
|
| 294 |
+
"lines": 189,
|
| 295 |
+
"truncated": false,
|
| 296 |
+
"block": 19,
|
| 297 |
+
"row": 8499
|
| 298 |
+
},
|
| 299 |
+
{
|
| 300 |
+
"path": "code/qc/qc_plot_reduc.pl",
|
| 301 |
+
"sha256": "c5c92972fd6528e03f98fe4e24bac02708c5658f0af72fff7a31e6c78e9cfbe4",
|
| 302 |
+
"language": "Perl",
|
| 303 |
+
"lines": 186,
|
| 304 |
+
"truncated": false,
|
| 305 |
+
"block": 19,
|
| 306 |
+
"row": 8497
|
| 307 |
+
},
|
| 308 |
+
{
|
| 309 |
+
"path": "code/segmentation/application/adni-bl_cnn_hcvc_hcvc-ag.sh",
|
| 310 |
+
"sha256": "713ee5d84870afe1174031672b385b5217d2eb5ccb5cb7200b450c2f47339c51",
|
| 311 |
+
"language": "Shell",
|
| 312 |
+
"lines": 183,
|
| 313 |
+
"truncated": false,
|
| 314 |
+
"block": 19,
|
| 315 |
+
"row": 15791
|
| 316 |
+
},
|
| 317 |
+
{
|
| 318 |
+
"path": "code/segmentation/application/adni-bl_malf_hcvc.sh",
|
| 319 |
+
"sha256": "190049017f7c4fc7dc98d0e24a9120425ed977bfb94bf6d1fd71ef1b22ec14e5",
|
| 320 |
+
"language": "Shell",
|
| 321 |
+
"lines": 57,
|
| 322 |
+
"truncated": false,
|
| 323 |
+
"block": 19,
|
| 324 |
+
"row": 15587
|
| 325 |
+
},
|
| 326 |
+
{
|
| 327 |
+
"path": "code/segmentation/application/adni-bl_nlpb_hcvc.sh",
|
| 328 |
+
"sha256": "a31d25b97a6f14af0357ef9c3c56c0f09146705b1f5e60238687aa412406e255",
|
| 329 |
+
"language": "Shell",
|
| 330 |
+
"lines": 81,
|
| 331 |
+
"truncated": false,
|
| 332 |
+
"block": 19,
|
| 333 |
+
"row": 15659
|
| 334 |
+
},
|
| 335 |
+
{
|
| 336 |
+
"path": "code/segmentation/application/manual-seg_cnn_hcvc_hcvc-ag.sh",
|
| 337 |
+
"sha256": "06404d05fe498798667903e072bc455b072a563e4cd7a334770ee086ead91f62",
|
| 338 |
+
"language": "Shell",
|
| 339 |
+
"lines": 175,
|
| 340 |
+
"truncated": false,
|
| 341 |
+
"block": 19,
|
| 342 |
+
"row": 15782
|
| 343 |
+
},
|
| 344 |
+
{
|
| 345 |
+
"path": "code/segmentation/application/manual-seg_cnn_hcvc_validation.sh",
|
| 346 |
+
"sha256": "89e0e1929403ab84db64a890f9cdbba2fe803a9482d8751a63d8cad9d8428782",
|
| 347 |
+
"language": "Shell",
|
| 348 |
+
"lines": 25,
|
| 349 |
+
"truncated": false,
|
| 350 |
+
"block": 19,
|
| 351 |
+
"row": 15429
|
| 352 |
+
},
|
| 353 |
+
{
|
| 354 |
+
"path": "code/segmentation/application/manual-seg_malf_hcvc.sh",
|
| 355 |
+
"sha256": "3b0594599c691c051de04dec9b26fdd877f67baf9c2efc032b209e88361ca2e1",
|
| 356 |
+
"language": "Shell",
|
| 357 |
+
"lines": 117,
|
| 358 |
+
"truncated": false,
|
| 359 |
+
"block": 19,
|
| 360 |
+
"row": 15710
|
| 361 |
+
},
|
| 362 |
+
{
|
| 363 |
+
"path": "code/segmentation/application/manual-seg_nlpb_hcvc.sh",
|
| 364 |
+
"sha256": "486a2722713b1a49c78c6b1365c4e0f3da37e101f3e62c6be93a2cd40963c2ca",
|
| 365 |
+
"language": "Shell",
|
| 366 |
+
"lines": 24,
|
| 367 |
+
"truncated": false,
|
| 368 |
+
"block": 19,
|
| 369 |
+
"row": 15362
|
| 370 |
+
},
|
| 371 |
+
{
|
| 372 |
+
"path": "code/segmentation/source_code/malf/seg_hippo.pl",
|
| 373 |
+
"sha256": "9eee0c4887915e3701fc940e338f8dd73cebc12ae3efa56591c4d527d121c7b8",
|
| 374 |
+
"language": "Perl",
|
| 375 |
+
"lines": 494,
|
| 376 |
+
"truncated": false,
|
| 377 |
+
"block": 19,
|
| 378 |
+
"row": 8513
|
| 379 |
+
},
|
| 380 |
+
{
|
| 381 |
+
"path": "code/segmentation/source_code/nlpb/snipe_minipipe_reduc.pl",
|
| 382 |
+
"sha256": "0d6d1b0f1b0e2c6ccc46c4b6a8fbe57af6e92d49732febe8df177740c805d250",
|
| 383 |
+
"language": "Perl",
|
| 384 |
+
"lines": 318,
|
| 385 |
+
"truncated": false,
|
| 386 |
+
"block": 19,
|
| 387 |
+
"row": 8506
|
| 388 |
+
},
|
| 389 |
+
{
|
| 390 |
+
"path": "container/__init__.py",
|
| 391 |
+
"sha256": "a371b1fb6f77e5884bcfd15da0189fc0d57e6d06957eb4cf38d55dc8ccef8392",
|
| 392 |
+
"language": "Python",
|
| 393 |
+
"lines": 8,
|
| 394 |
+
"truncated": false,
|
| 395 |
+
"block": 19,
|
| 396 |
+
"row": 8665
|
| 397 |
+
},
|
| 398 |
+
{
|
| 399 |
+
"path": "container/cnn/apply_segm_model.py",
|
| 400 |
+
"sha256": "5dba8dddb5e805c94e29f412fdc3a7a0782188f73b8f1c4b87605c91342c72c9",
|
| 401 |
+
"language": "Python",
|
| 402 |
+
"lines": 285,
|
| 403 |
+
"truncated": false,
|
| 404 |
+
"block": 19,
|
| 405 |
+
"row": 12901
|
| 406 |
+
},
|
| 407 |
+
{
|
| 408 |
+
"path": "container/cnn/cnn_hcvc.py",
|
| 409 |
+
"sha256": "faa2c435bed056d7eddec2b611c0d3da30a9b79de8f01f792974edff5e1c7c64",
|
| 410 |
+
"language": "Python",
|
| 411 |
+
"lines": 437,
|
| 412 |
+
"truncated": false,
|
| 413 |
+
"block": 19,
|
| 414 |
+
"row": 13753
|
| 415 |
+
},
|
| 416 |
+
{
|
| 417 |
+
"path": "container/main.py",
|
| 418 |
+
"sha256": "a8b01026937bd66708e389e59a5fcd75d8f4c2a2ec55de5e6a766c58109844a9",
|
| 419 |
+
"language": "Python",
|
| 420 |
+
"lines": 695,
|
| 421 |
+
"truncated": false,
|
| 422 |
+
"block": 19,
|
| 423 |
+
"row": 14304
|
| 424 |
+
},
|
| 425 |
+
{
|
| 426 |
+
"path": "container/minc/minc_calc_hvr.py",
|
| 427 |
+
"sha256": "dbf697883fa8df99423bc4e481cb489735241409116418005d8a91f37e4ea84f",
|
| 428 |
+
"language": "Python",
|
| 429 |
+
"lines": 265,
|
| 430 |
+
"truncated": false,
|
| 431 |
+
"block": 19,
|
| 432 |
+
"row": 12880
|
| 433 |
+
},
|
| 434 |
+
{
|
| 435 |
+
"path": "container/minc/minc_mtl_qc.py",
|
| 436 |
+
"sha256": "ddab6c41f2746928123c99906365ee6b6d294853f7912d2c2ebf0702fa2cc180",
|
| 437 |
+
"language": "Python",
|
| 438 |
+
"lines": 436,
|
| 439 |
+
"truncated": false,
|
| 440 |
+
"block": 19,
|
| 441 |
+
"row": 13582
|
| 442 |
+
},
|
| 443 |
+
{
|
| 444 |
+
"path": "container/minc/minc_tools.py",
|
| 445 |
+
"sha256": "2b394323cc5b517494c3700f56e66226ac759c1456c76f383c6d5683fbc449ea",
|
| 446 |
+
"language": "Python",
|
| 447 |
+
"lines": 2157,
|
| 448 |
+
"truncated": false,
|
| 449 |
+
"block": 19,
|
| 450 |
+
"row": 14610
|
| 451 |
+
},
|
| 452 |
+
{
|
| 453 |
+
"path": "container/model/attn.py",
|
| 454 |
+
"sha256": "1d2496e37a38cb077057d6bea48972686245e1633e145f73c18772283e3957b7",
|
| 455 |
+
"language": "Python",
|
| 456 |
+
"lines": 183,
|
| 457 |
+
"truncated": false,
|
| 458 |
+
"block": 19,
|
| 459 |
+
"row": 12470
|
| 460 |
+
},
|
| 461 |
+
{
|
| 462 |
+
"path": "container/model/basic.py",
|
| 463 |
+
"sha256": "6963ae767308df630afd6ee6c72afd60b868bc98eaf59af2c9359e42213631d3",
|
| 464 |
+
"language": "Python",
|
| 465 |
+
"lines": 133,
|
| 466 |
+
"truncated": false,
|
| 467 |
+
"block": 19,
|
| 468 |
+
"row": 11448
|
| 469 |
+
},
|
| 470 |
+
{
|
| 471 |
+
"path": "container/model/basic2.py",
|
| 472 |
+
"sha256": "b358a76358808543343a3fed923cb20d51ad3841d85de07bbc51051f122fb0c7",
|
| 473 |
+
"language": "Python",
|
| 474 |
+
"lines": 134,
|
| 475 |
+
"truncated": false,
|
| 476 |
+
"block": 19,
|
| 477 |
+
"row": 11384
|
| 478 |
+
},
|
| 479 |
+
{
|
| 480 |
+
"path": "container/model/ensemble.py",
|
| 481 |
+
"sha256": "546df7b1c82a9617159897bc2dda6903206de92c0561cc13da7bfdc20b1dfb12",
|
| 482 |
+
"language": "Python",
|
| 483 |
+
"lines": 27,
|
| 484 |
+
"truncated": false,
|
| 485 |
+
"block": 19,
|
| 486 |
+
"row": 9055
|
| 487 |
+
},
|
| 488 |
+
{
|
| 489 |
+
"path": "container/model/losses.py",
|
| 490 |
+
"sha256": "ffa16a2fa94e13deda6cdd1fd4e66772a413b247ad5061707d26ea77757827d1",
|
| 491 |
+
"language": "Python",
|
| 492 |
+
"lines": 52,
|
| 493 |
+
"truncated": false,
|
| 494 |
+
"block": 19,
|
| 495 |
+
"row": 9613
|
| 496 |
+
},
|
| 497 |
+
{
|
| 498 |
+
"path": "container/model/simple_fcn.py",
|
| 499 |
+
"sha256": "78d0a69e13ede95c0a87692e0e717a84aa513e81bc7d2d5504bbbcb3ce8232f2",
|
| 500 |
+
"language": "Python",
|
| 501 |
+
"lines": 52,
|
| 502 |
+
"truncated": false,
|
| 503 |
+
"block": 19,
|
| 504 |
+
"row": 9644
|
| 505 |
+
},
|
| 506 |
+
{
|
| 507 |
+
"path": "container/model/unet.py",
|
| 508 |
+
"sha256": "a7768e612c780c3abd0e3ef991b33c894e2b79fde265230bf18788b486ba01f6",
|
| 509 |
+
"language": "Python",
|
| 510 |
+
"lines": 410,
|
| 511 |
+
"truncated": false,
|
| 512 |
+
"block": 19,
|
| 513 |
+
"row": 13729
|
| 514 |
+
},
|
| 515 |
+
{
|
| 516 |
+
"path": "container/model/unet2.py",
|
| 517 |
+
"sha256": "91234ee17ca015831cf5c0d2f2893dbdcec125a2865834f857c9764491b0b92d",
|
| 518 |
+
"language": "Python",
|
| 519 |
+
"lines": 370,
|
| 520 |
+
"truncated": false,
|
| 521 |
+
"block": 19,
|
| 522 |
+
"row": 13709
|
| 523 |
+
},
|
| 524 |
+
{
|
| 525 |
+
"path": "container/model/util.py",
|
| 526 |
+
"sha256": "12dba5243501c289abe900f78f2a8ac97984afb71c7b64e87766e439fbbd88a1",
|
| 527 |
+
"language": "Python",
|
| 528 |
+
"lines": 1148,
|
| 529 |
+
"truncated": false,
|
| 530 |
+
"block": 19,
|
| 531 |
+
"row": 14530
|
| 532 |
+
},
|
| 533 |
+
{
|
| 534 |
+
"path": "container/model/vae.py",
|
| 535 |
+
"sha256": "a676c2500a3bfd475328dae8a553cd0ff778c4e290933023cfca9c524132d92a",
|
| 536 |
+
"language": "Python",
|
| 537 |
+
"lines": 393,
|
| 538 |
+
"truncated": false,
|
| 539 |
+
"block": 19,
|
| 540 |
+
"row": 13803
|
| 541 |
+
},
|
| 542 |
+
{
|
| 543 |
+
"path": "container/model/vae2.py",
|
| 544 |
+
"sha256": "6c16925716c682db268e524fb58bf8f176c8a2026fdf98e0d8eca05765bfd0e5",
|
| 545 |
+
"language": "Python",
|
| 546 |
+
"lines": 466,
|
| 547 |
+
"truncated": false,
|
| 548 |
+
"block": 19,
|
| 549 |
+
"row": 14047
|
| 550 |
+
},
|
| 551 |
+
{
|
| 552 |
+
"path": "quarto/manuscript.qmd",
|
| 553 |
+
"sha256": "bfa4eee0f45feaa79fa4807ba71cd08883552355f94f131284d535e50690448f",
|
| 554 |
+
"language": "Quarto",
|
| 555 |
+
"lines": 2301,
|
| 556 |
+
"truncated": false,
|
| 557 |
+
"block": 19,
|
| 558 |
+
"row": 14662
|
| 559 |
+
},
|
| 560 |
+
{
|
| 561 |
+
"path": "renv/activate.R",
|
| 562 |
+
"sha256": "ccb66c735b912604a23806acf5dba20a316f0fc191ff8674ab21aa55a113f633",
|
| 563 |
+
"language": "R",
|
| 564 |
+
"lines": 1419,
|
| 565 |
+
"truncated": false,
|
| 566 |
+
"block": 19,
|
| 567 |
+
"row": 15184
|
| 568 |
+
}
|
| 569 |
+
]
|
| 570 |
+
}
|
manifests/1c/github.com__ednahuang__subnetwork-clustering-lme-modeling.json
ADDED
|
@@ -0,0 +1,1461 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/ednahuang/subnetwork-clustering-lme-modeling",
|
| 4 |
+
"url": "https://github.com/EdnaHuang/Subnetwork-clustering-lme-modeling",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "54af950cdde16634b09a54302d91d9b44011736d",
|
| 7 |
+
"license": "Apache-2.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "Clustering/Compute_clustering.m",
|
| 13 |
+
"sha256": "d8606b3cd8503d2795e5df55a8a751279da2a1d39fc1bb678694f39d274827cc",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 107,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 7004
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "Clustering/Compute_clustering_loop.m",
|
| 22 |
+
"sha256": "ebc058f9bffc63b132d849c9b2afff9a3dd12810f69307e92e0e9da603c0dbe7",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 89,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 6611
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "Clustering/Function/CosineM.m",
|
| 31 |
+
"sha256": "7f0d53f1502ad53cdf9231a1e41bbb497a9affb5ceef386e90a0b89377b7ff74",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 17,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 4475
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "Clustering/Function/CovarM.m",
|
| 40 |
+
"sha256": "98e872f9ff0e11442cda0693510ff928f61ec6d61ae81e98ad4e2548decd34b6",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 10,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 4354
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "Clustering/Function/JaccardM.m",
|
| 49 |
+
"sha256": "9b800f912742882e34db9026c3264ef7fb5fbc446ea5e17806ad767db93d0d0a",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 12,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 4374
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "Clustering/Function/covnorm.m",
|
| 58 |
+
"sha256": "1f9fdac347725c33224140edcd187a52b05af17ff75cbe7c6ddde5499c4fc611",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 4,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 4306
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "Clustering/Function/kmeansopt.m",
|
| 67 |
+
"sha256": "ccc3d66b0202ba991143379a08a034048e4fec843d52ad1c3abb62a00769fae7",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 50,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 4994
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "Clustering/Function/kmeansoptrnd.m",
|
| 76 |
+
"sha256": "a380fa41c87bd5eff5529c733e5e49cdbc1e034d3a72f8264d4386b0ee4961ed",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 34,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 4693
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "Clustering/Function/plot_CommDetect_clusters.m",
|
| 85 |
+
"sha256": "fa522eb63fc0bd6a6b6a02cd8ac29ddf14df90e6f8ba52d1571a67177a6afdd4",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 196,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 7146
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "Clustering/Function/plot_DBSCAN_clusters.m",
|
| 94 |
+
"sha256": "a75a5e8ced45d8096c408065599491f3a58d752214dd000a241174c277295f77",
|
| 95 |
+
"language": "MATLAB",
|
| 96 |
+
"lines": 208,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 7240
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "Clustering/Function/plot_Kmean_clusters.m",
|
| 103 |
+
"sha256": "b2e98c560b900194df0df9bdaa6f923eeebe8cf41ea4fa2b845c7ba301946859",
|
| 104 |
+
"language": "MATLAB",
|
| 105 |
+
"lines": 158,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 6871
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "Clustering/Function/run_CommDetect_asymmetry.m",
|
| 112 |
+
"sha256": "31edbe5955631954de5bb513808578a71c7f359752bb0d18a058737a76721b27",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 354,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 7796
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "Clustering/Function/run_CommDetect_uniform.m",
|
| 121 |
+
"sha256": "3239610dee2c9c56dca6dd06cbbe46d71a1ea57f5db464d19a2306190af76ce8",
|
| 122 |
+
"language": "MATLAB",
|
| 123 |
+
"lines": 358,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 7794
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "Clustering/Function/run_DBSCAN.m",
|
| 130 |
+
"sha256": "f92cee1451142193418ebb9e3d98c36a2fa0a02ee4636111b871e258067566e5",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 378,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 7808
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "Clustering/Function/run_Kmean.m",
|
| 139 |
+
"sha256": "747e662abc522e233ae5532ab1fcef9b115c151410e8e904f7d91bf7dc5e5fa7",
|
| 140 |
+
"language": "MATLAB",
|
| 141 |
+
"lines": 307,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 7617
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "Clustering/Function/silh.m",
|
| 148 |
+
"sha256": "271395051816b3c2510d6b4eab557456e7bac30c88b57ec45f6a12f268f421d3",
|
| 149 |
+
"language": "MATLAB",
|
| 150 |
+
"lines": 18,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 4524
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "Clustering/Function_CommDetec/adjacency_plot_und.m",
|
| 157 |
+
"sha256": "33929b8260774a3fd5089af7d4569dff3cdb1794ef4da84054ef1e8bc3947035",
|
| 158 |
+
"language": "MATLAB",
|
| 159 |
+
"lines": 53,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 9,
|
| 162 |
+
"row": 3973
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "Clustering/Function_CommDetec/agreement.m",
|
| 166 |
+
"sha256": "f1bf55f2d30da22fcd7c4bd9fd4720e8dc4db2a2853de2053fdd7590f65e507a",
|
| 167 |
+
"language": "MATLAB",
|
| 168 |
+
"lines": 60,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 9,
|
| 171 |
+
"row": 4071
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "Clustering/Function_CommDetec/agreement_weighted.m",
|
| 175 |
+
"sha256": "67b690da34af7a6ef5e9507370b91eec7ef5fe8fbbe542129f8aebe056084c4e",
|
| 176 |
+
"language": "MATLAB",
|
| 177 |
+
"lines": 28,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 9,
|
| 180 |
+
"row": 3650
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "Clustering/Function_CommDetec/align_matrices.m",
|
| 184 |
+
"sha256": "0658ac8b032cf640f563739934dbcfc225fd78e507f4555de578373bfdb39cbf",
|
| 185 |
+
"language": "MATLAB",
|
| 186 |
+
"lines": 135,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 1,
|
| 189 |
+
"row": 3644
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "Clustering/Function_CommDetec/assortativity_bin.m",
|
| 193 |
+
"sha256": "be9ae98f18d1a478c0fcf064af163a706b78aa0f744302d32e2458fa62d8d6ea",
|
| 194 |
+
"language": "MATLAB",
|
| 195 |
+
"lines": 64,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 1,
|
| 198 |
+
"row": 3175
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "Clustering/Function_CommDetec/assortativity_wei.m",
|
| 202 |
+
"sha256": "a5b289413c7c2e329510a5fd078d1feaa1f0ed756f52900f1a794d098f5b9334",
|
| 203 |
+
"language": "MATLAB",
|
| 204 |
+
"lines": 62,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 1,
|
| 207 |
+
"row": 3162
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "Clustering/Function_CommDetec/backbone_wu.m",
|
| 211 |
+
"sha256": "927a9022fc98e0d1e414f06acc71c450c4db3fb6a0ca8757b6a61b9c144bf811",
|
| 212 |
+
"language": "MATLAB",
|
| 213 |
+
"lines": 64,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 1,
|
| 216 |
+
"row": 3172
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "Clustering/Function_CommDetec/betweenness_bin.m",
|
| 220 |
+
"sha256": "5d39f627576791ca5f2c15b223ae3e3757f3b35a5a127dfc4ecef629ee7c26cb",
|
| 221 |
+
"language": "MATLAB",
|
| 222 |
+
"lines": 53,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 9,
|
| 225 |
+
"row": 4127
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "Clustering/Function_CommDetec/betweenness_wei.m",
|
| 229 |
+
"sha256": "10efa0ff1cb4cbd9d38e290008842c90be6af85cb0063131b796c16457d1ced1",
|
| 230 |
+
"language": "MATLAB",
|
| 231 |
+
"lines": 76,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 9,
|
| 234 |
+
"row": 4533
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "Clustering/Function_CommDetec/breadth.m",
|
| 238 |
+
"sha256": "1f9f88b8976cbc2f9fe6f1303fd4c8418436b645f2f2626ceb724f47b5ca3479",
|
| 239 |
+
"language": "MATLAB",
|
| 240 |
+
"lines": 62,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 9,
|
| 243 |
+
"row": 4102
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "Clustering/Function_CommDetec/breadthdist.m",
|
| 247 |
+
"sha256": "bd4dc94aa1fe9303982dae56dee3874c9df668cbc3b4370b7291a7c66a1b49d5",
|
| 248 |
+
"language": "MATLAB",
|
| 249 |
+
"lines": 39,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 1,
|
| 252 |
+
"row": 2788
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "Clustering/Function_CommDetec/charpath.m",
|
| 256 |
+
"sha256": "932e6a2e498fc9300958d935141761781c1627a0a6ff5af3b9a15bec7b69bd6b",
|
| 257 |
+
"language": "MATLAB",
|
| 258 |
+
"lines": 79,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 1,
|
| 261 |
+
"row": 3377
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "Clustering/Function_CommDetec/clique_communities.m",
|
| 265 |
+
"sha256": "68ec84b5dfcaed54c1d23eeca686c3420a84a7740b46a48b3c05cc2051be679a",
|
| 266 |
+
"language": "MATLAB",
|
| 267 |
+
"lines": 102,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 9,
|
| 270 |
+
"row": 4622
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "Clustering/Function_CommDetec/clustering_coef_bd.m",
|
| 274 |
+
"sha256": "89523110ee7a6b4c36e9d1af9f9c004dceef0bba1960852ad2508d268293bee4",
|
| 275 |
+
"language": "MATLAB",
|
| 276 |
+
"lines": 35,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 9,
|
| 279 |
+
"row": 3930
|
| 280 |
+
},
|
| 281 |
+
{
|
| 282 |
+
"path": "Clustering/Function_CommDetec/clustering_coef_bu.m",
|
| 283 |
+
"sha256": "2b167bb0fb778d6395b766ab93be5fe60808527dffb9ff489b6680a379f1e75a",
|
| 284 |
+
"language": "MATLAB",
|
| 285 |
+
"lines": 28,
|
| 286 |
+
"truncated": false,
|
| 287 |
+
"block": 9,
|
| 288 |
+
"row": 3426
|
| 289 |
+
},
|
| 290 |
+
{
|
| 291 |
+
"path": "Clustering/Function_CommDetec/clustering_coef_wd.m",
|
| 292 |
+
"sha256": "548ba3c7ff0fa96e7383b11b078a84e640e644303a82494fc5f6d3a41f0e889e",
|
| 293 |
+
"language": "MATLAB",
|
| 294 |
+
"lines": 42,
|
| 295 |
+
"truncated": false,
|
| 296 |
+
"block": 9,
|
| 297 |
+
"row": 4016
|
| 298 |
+
},
|
| 299 |
+
{
|
| 300 |
+
"path": "Clustering/Function_CommDetec/clustering_coef_wu.m",
|
| 301 |
+
"sha256": "a5c916efe30dd8ed21daf51b6c6355f9db800e483ee867ec2833f6b5c5a478f7",
|
| 302 |
+
"language": "MATLAB",
|
| 303 |
+
"lines": 30,
|
| 304 |
+
"truncated": false,
|
| 305 |
+
"block": 9,
|
| 306 |
+
"row": 3645
|
| 307 |
+
},
|
| 308 |
+
{
|
| 309 |
+
"path": "Clustering/Function_CommDetec/clustering_coef_wu_sign.m",
|
| 310 |
+
"sha256": "9817a440ca551da749cb92f2218bf7bd9daf5b14f8384cbb26e61a5ec507b396",
|
| 311 |
+
"language": "MATLAB",
|
| 312 |
+
"lines": 136,
|
| 313 |
+
"truncated": false,
|
| 314 |
+
"block": 9,
|
| 315 |
+
"row": 5165
|
| 316 |
+
},
|
| 317 |
+
{
|
| 318 |
+
"path": "Clustering/Function_CommDetec/community_louvain.m",
|
| 319 |
+
"sha256": "a230b69bb01db03ac48b6a273d93b76574ff0326978e003f77c265c311961260",
|
| 320 |
+
"language": "MATLAB",
|
| 321 |
+
"lines": 198,
|
| 322 |
+
"truncated": false,
|
| 323 |
+
"block": 1,
|
| 324 |
+
"row": 3909
|
| 325 |
+
},
|
| 326 |
+
{
|
| 327 |
+
"path": "Clustering/Function_CommDetec/consensus_und.m",
|
| 328 |
+
"sha256": "217f73705d6a9ec34039b67c6dcb18a01266cb6c51b3a2d72501880d7ab77f1d",
|
| 329 |
+
"language": "MATLAB",
|
| 330 |
+
"lines": 96,
|
| 331 |
+
"truncated": false,
|
| 332 |
+
"block": 1,
|
| 333 |
+
"row": 3361
|
| 334 |
+
},
|
| 335 |
+
{
|
| 336 |
+
"path": "Clustering/Function_CommDetec/core_periphery_dir.m",
|
| 337 |
+
"sha256": "bd6fbe4a62f53aa4c19167d3f7f3f894cb032773d443cf0431992934526b26a4",
|
| 338 |
+
"language": "MATLAB",
|
| 339 |
+
"lines": 88,
|
| 340 |
+
"truncated": false,
|
| 341 |
+
"block": 1,
|
| 342 |
+
"row": 3430
|
| 343 |
+
},
|
| 344 |
+
{
|
| 345 |
+
"path": "Clustering/Function_CommDetec/cycprob.m",
|
| 346 |
+
"sha256": "0916d7e03ab5e61508dfdd71ab37aa9dc27a51c13a6ced31b94eb92a0bce0e6c",
|
| 347 |
+
"language": "MATLAB",
|
| 348 |
+
"lines": 45,
|
| 349 |
+
"truncated": false,
|
| 350 |
+
"block": 1,
|
| 351 |
+
"row": 2980
|
| 352 |
+
},
|
| 353 |
+
{
|
| 354 |
+
"path": "Clustering/Function_CommDetec/degrees_dir.m",
|
| 355 |
+
"sha256": "d8f173b67f2c2b0a140835872319160c6130ae924e460342a5ea466ef5c93951",
|
| 356 |
+
"language": "MATLAB",
|
| 357 |
+
"lines": 31,
|
| 358 |
+
"truncated": false,
|
| 359 |
+
"block": 1,
|
| 360 |
+
"row": 2713
|
| 361 |
+
},
|
| 362 |
+
{
|
| 363 |
+
"path": "Clustering/Function_CommDetec/degrees_und.m",
|
| 364 |
+
"sha256": "c43b0aed271a26f574ea70a4d8bfd59e204e2ff34a8030966ac72ac4e433260b",
|
| 365 |
+
"language": "MATLAB",
|
| 366 |
+
"lines": 22,
|
| 367 |
+
"truncated": false,
|
| 368 |
+
"block": 1,
|
| 369 |
+
"row": 2472
|
| 370 |
+
},
|
| 371 |
+
{
|
| 372 |
+
"path": "Clustering/Function_CommDetec/density_dir.m",
|
| 373 |
+
"sha256": "9ba1f96e6e49517740fa64ff06fea4e3c4b817918affcd445366dd13992ddf37",
|
| 374 |
+
"language": "MATLAB",
|
| 375 |
+
"lines": 24,
|
| 376 |
+
"truncated": false,
|
| 377 |
+
"block": 1,
|
| 378 |
+
"row": 2566
|
| 379 |
+
},
|
| 380 |
+
{
|
| 381 |
+
"path": "Clustering/Function_CommDetec/density_und.m",
|
| 382 |
+
"sha256": "b5eaaec9177fab93554aaa837a5c9444e3127f315616928b5246d4f420e53bb7",
|
| 383 |
+
"language": "MATLAB",
|
| 384 |
+
"lines": 28,
|
| 385 |
+
"truncated": false,
|
| 386 |
+
"block": 1,
|
| 387 |
+
"row": 2621
|
| 388 |
+
},
|
| 389 |
+
{
|
| 390 |
+
"path": "Clustering/Function_CommDetec/diffusion_efficiency.m",
|
| 391 |
+
"sha256": "396b68160bd546744a6c8a9f25e0253becaf33cb97ecb72f46974f43fc3bd25b",
|
| 392 |
+
"language": "MATLAB",
|
| 393 |
+
"lines": 33,
|
| 394 |
+
"truncated": false,
|
| 395 |
+
"block": 9,
|
| 396 |
+
"row": 3717
|
| 397 |
+
},
|
| 398 |
+
{
|
| 399 |
+
"path": "Clustering/Function_CommDetec/distance_bin.m",
|
| 400 |
+
"sha256": "0d3eef9a7b5e9182f723954ecf8f9b17799778e5755a2cc6db7fce2abb74c2c1",
|
| 401 |
+
"language": "MATLAB",
|
| 402 |
+
"lines": 45,
|
| 403 |
+
"truncated": false,
|
| 404 |
+
"block": 6,
|
| 405 |
+
"row": 7610
|
| 406 |
+
},
|
| 407 |
+
{
|
| 408 |
+
"path": "Clustering/Function_CommDetec/distance_wei.m",
|
| 409 |
+
"sha256": "4072a23151118b15ed262b7c037d24ec032e1905afd8f2ed45ad6f725e1732ae",
|
| 410 |
+
"language": "MATLAB",
|
| 411 |
+
"lines": 71,
|
| 412 |
+
"truncated": false,
|
| 413 |
+
"block": 9,
|
| 414 |
+
"row": 4558
|
| 415 |
+
},
|
| 416 |
+
{
|
| 417 |
+
"path": "Clustering/Function_CommDetec/distance_wei_floyd.m",
|
| 418 |
+
"sha256": "309b4100c36ed9fbeb9be9e81dcd9e744c3d2f4ac3269f8f3ab469851701d35d",
|
| 419 |
+
"language": "MATLAB",
|
| 420 |
+
"lines": 121,
|
| 421 |
+
"truncated": false,
|
| 422 |
+
"block": 1,
|
| 423 |
+
"row": 3453
|
| 424 |
+
},
|
| 425 |
+
{
|
| 426 |
+
"path": "Clustering/Function_CommDetec/diversity_coef_sign.m",
|
| 427 |
+
"sha256": "600115eb33dcfd4e1ccc87da28388f69bf74ac9bffe343bb88da3ef5433bf624",
|
| 428 |
+
"language": "MATLAB",
|
| 429 |
+
"lines": 46,
|
| 430 |
+
"truncated": false,
|
| 431 |
+
"block": 9,
|
| 432 |
+
"row": 4040
|
| 433 |
+
},
|
| 434 |
+
{
|
| 435 |
+
"path": "Clustering/Function_CommDetec/edge_betweenness_bin.m",
|
| 436 |
+
"sha256": "2d4eec934fc889dfef526f947fa20e586d44408c89de6b6bf029ad3fff3d749e",
|
| 437 |
+
"language": "MATLAB",
|
| 438 |
+
"lines": 68,
|
| 439 |
+
"truncated": false,
|
| 440 |
+
"block": 9,
|
| 441 |
+
"row": 4335
|
| 442 |
+
},
|
| 443 |
+
{
|
| 444 |
+
"path": "Clustering/Function_CommDetec/edge_betweenness_wei.m",
|
| 445 |
+
"sha256": "a7a39bfbc8509a434d8b3d311e690d01e67130ee62d7ddd4a193b614d5f38bfa",
|
| 446 |
+
"language": "MATLAB",
|
| 447 |
+
"lines": 82,
|
| 448 |
+
"truncated": false,
|
| 449 |
+
"block": 9,
|
| 450 |
+
"row": 4609
|
| 451 |
+
},
|
| 452 |
+
{
|
| 453 |
+
"path": "Clustering/Function_CommDetec/edge_nei_overlap_bd.m",
|
| 454 |
+
"sha256": "6c73ce862538f97a49aecebd8f762127f7b24a68729f194df6f347004bfbc90e",
|
| 455 |
+
"language": "MATLAB",
|
| 456 |
+
"lines": 48,
|
| 457 |
+
"truncated": false,
|
| 458 |
+
"block": 9,
|
| 459 |
+
"row": 4100
|
| 460 |
+
},
|
| 461 |
+
{
|
| 462 |
+
"path": "Clustering/Function_CommDetec/edge_nei_overlap_bu.m",
|
| 463 |
+
"sha256": "06bbac1c5d88e460899d91afc2aef9796677e341e011374d0af33a94af753c4c",
|
| 464 |
+
"language": "MATLAB",
|
| 465 |
+
"lines": 45,
|
| 466 |
+
"truncated": false,
|
| 467 |
+
"block": 9,
|
| 468 |
+
"row": 4052
|
| 469 |
+
},
|
| 470 |
+
{
|
| 471 |
+
"path": "Clustering/Function_CommDetec/efficiency_bin.m",
|
| 472 |
+
"sha256": "571db8d65bfde8b934a5f649e0dc9404274be464ac05de8bda31165a65856db9",
|
| 473 |
+
"language": "MATLAB",
|
| 474 |
+
"lines": 76,
|
| 475 |
+
"truncated": false,
|
| 476 |
+
"block": 9,
|
| 477 |
+
"row": 4484
|
| 478 |
+
},
|
| 479 |
+
{
|
| 480 |
+
"path": "Clustering/Function_CommDetec/efficiency_wei.m",
|
| 481 |
+
"sha256": "5097d1383a684e54525145340ebba6fe0ad319dccc3ee7054abdb86e143d2e5e",
|
| 482 |
+
"language": "MATLAB",
|
| 483 |
+
"lines": 136,
|
| 484 |
+
"truncated": false,
|
| 485 |
+
"block": 9,
|
| 486 |
+
"row": 5217
|
| 487 |
+
},
|
| 488 |
+
{
|
| 489 |
+
"path": "Clustering/Function_CommDetec/eigenvector_centrality_und.m",
|
| 490 |
+
"sha256": "977f024aa4a736e6a7ccff031b4f34b0a7a8914a5cb3a3d261895277fba12dce",
|
| 491 |
+
"language": "MATLAB",
|
| 492 |
+
"lines": 37,
|
| 493 |
+
"truncated": false,
|
| 494 |
+
"block": 9,
|
| 495 |
+
"row": 3814
|
| 496 |
+
},
|
| 497 |
+
{
|
| 498 |
+
"path": "Clustering/Function_CommDetec/erange.m",
|
| 499 |
+
"sha256": "16536ce0c2accd2fcba0181e4a9bc1301ac307f2936bd77de34a6c674a1a5ec1",
|
| 500 |
+
"language": "MATLAB",
|
| 501 |
+
"lines": 45,
|
| 502 |
+
"truncated": false,
|
| 503 |
+
"block": 1,
|
| 504 |
+
"row": 2935
|
| 505 |
+
},
|
| 506 |
+
{
|
| 507 |
+
"path": "Clustering/Function_CommDetec/evaluate_generative_model.m",
|
| 508 |
+
"sha256": "254656cb1f278f55ec205406302940e801f7b2490d075c4b21a8cb6ce53f0273",
|
| 509 |
+
"language": "MATLAB",
|
| 510 |
+
"lines": 100,
|
| 511 |
+
"truncated": false,
|
| 512 |
+
"block": 1,
|
| 513 |
+
"row": 3463
|
| 514 |
+
},
|
| 515 |
+
{
|
| 516 |
+
"path": "Clustering/Function_CommDetec/fcn_cmapjet.m",
|
| 517 |
+
"sha256": "b15b5c871cd8f297be88be7ebeed1938b7aad5c1a2bccb740bec18ddbe61baac",
|
| 518 |
+
"language": "MATLAB",
|
| 519 |
+
"lines": 5,
|
| 520 |
+
"truncated": false,
|
| 521 |
+
"block": 19,
|
| 522 |
+
"row": 4362
|
| 523 |
+
},
|
| 524 |
+
{
|
| 525 |
+
"path": "Clustering/Function_CommDetec/find_motif34.m",
|
| 526 |
+
"sha256": "266c6eda30b2aef280743062b8e2327252fb4f3f5517751c99bda19dde814975",
|
| 527 |
+
"language": "MATLAB",
|
| 528 |
+
"lines": 50,
|
| 529 |
+
"truncated": false,
|
| 530 |
+
"block": 9,
|
| 531 |
+
"row": 3939
|
| 532 |
+
},
|
| 533 |
+
{
|
| 534 |
+
"path": "Clustering/Function_CommDetec/findpaths.m",
|
| 535 |
+
"sha256": "acce80b128ebe7cde2f51bf79bc79cabf3b4b5989b7452efa8f5a8cd80d7fafd",
|
| 536 |
+
"language": "MATLAB",
|
| 537 |
+
"lines": 158,
|
| 538 |
+
"truncated": false,
|
| 539 |
+
"block": 1,
|
| 540 |
+
"row": 3727
|
| 541 |
+
},
|
| 542 |
+
{
|
| 543 |
+
"path": "Clustering/Function_CommDetec/findwalks.m",
|
| 544 |
+
"sha256": "9c31c38e104f37a4cbc5567f334e65e2d5813aa0c7d4e93f76b04e7b031f2341",
|
| 545 |
+
"language": "MATLAB",
|
| 546 |
+
"lines": 41,
|
| 547 |
+
"truncated": false,
|
| 548 |
+
"block": 1,
|
| 549 |
+
"row": 2813
|
| 550 |
+
},
|
| 551 |
+
{
|
| 552 |
+
"path": "Clustering/Function_CommDetec/flow_coef_bd.m",
|
| 553 |
+
"sha256": "806f1f8072655b88191e755d2c275a00db363cd693b6a90cbfd74b6198c77e54",
|
| 554 |
+
"language": "MATLAB",
|
| 555 |
+
"lines": 51,
|
| 556 |
+
"truncated": false,
|
| 557 |
+
"block": 1,
|
| 558 |
+
"row": 2997
|
| 559 |
+
},
|
| 560 |
+
{
|
| 561 |
+
"path": "Clustering/Function_CommDetec/gateway_coef_sign.m",
|
| 562 |
+
"sha256": "e9d981f4eb907de765a1747740de5ab7a29bff6d569d4eed695892f87ebc22c7",
|
| 563 |
+
"language": "MATLAB",
|
| 564 |
+
"lines": 83,
|
| 565 |
+
"truncated": false,
|
| 566 |
+
"block": 1,
|
| 567 |
+
"row": 3672
|
| 568 |
+
},
|
| 569 |
+
{
|
| 570 |
+
"path": "Clustering/Function_CommDetec/generate_fc.m",
|
| 571 |
+
"sha256": "35d447f8ee3197a4bc280566dc04871684ccd8dc144b09efac736a60ef2485a2",
|
| 572 |
+
"language": "MATLAB",
|
| 573 |
+
"lines": 241,
|
| 574 |
+
"truncated": false,
|
| 575 |
+
"block": 1,
|
| 576 |
+
"row": 4016
|
| 577 |
+
},
|
| 578 |
+
{
|
| 579 |
+
"path": "Clustering/Function_CommDetec/generative_model.m",
|
| 580 |
+
"sha256": "bf9197c2b1d6f39f007102b6b2441cfa4a50344f09f96c99b594478c84ca86af",
|
| 581 |
+
"language": "MATLAB",
|
| 582 |
+
"lines": 897,
|
| 583 |
+
"truncated": false,
|
| 584 |
+
"block": 1,
|
| 585 |
+
"row": 4265
|
| 586 |
+
},
|
| 587 |
+
{
|
| 588 |
+
"path": "Clustering/Function_CommDetec/get_components.m",
|
| 589 |
+
"sha256": "b26e917bdc5daa59d4cef1845bf28a06cdff98be44c03faa87cdd87baee4c81d",
|
| 590 |
+
"language": "MATLAB",
|
| 591 |
+
"lines": 57,
|
| 592 |
+
"truncated": false,
|
| 593 |
+
"block": 1,
|
| 594 |
+
"row": 3038
|
| 595 |
+
},
|
| 596 |
+
{
|
| 597 |
+
"path": "Clustering/Function_CommDetec/grid_communities.m",
|
| 598 |
+
"sha256": "d5a89816266865471564e6d0e212f5c56d372ad6a8de852e1abb57567349e672",
|
| 599 |
+
"language": "MATLAB",
|
| 600 |
+
"lines": 46,
|
| 601 |
+
"truncated": false,
|
| 602 |
+
"block": 9,
|
| 603 |
+
"row": 4000
|
| 604 |
+
},
|
| 605 |
+
{
|
| 606 |
+
"path": "Clustering/Function_CommDetec/gtom.m",
|
| 607 |
+
"sha256": "c54e50f46f93d95c933f289ad5da4e2f305b90ee4a8d43bf8eef085c94a87ff5",
|
| 608 |
+
"language": "MATLAB",
|
| 609 |
+
"lines": 81,
|
| 610 |
+
"truncated": false,
|
| 611 |
+
"block": 1,
|
| 612 |
+
"row": 3270
|
| 613 |
+
},
|
| 614 |
+
{
|
| 615 |
+
"path": "Clustering/Function_CommDetec/jdegree.m",
|
| 616 |
+
"sha256": "0dbad4f5f41e4644df277cdae2a76ab25b2179c1e103fe9e2b0133f88c13dcd2",
|
| 617 |
+
"language": "MATLAB",
|
| 618 |
+
"lines": 48,
|
| 619 |
+
"truncated": false,
|
| 620 |
+
"block": 1,
|
| 621 |
+
"row": 2946
|
| 622 |
+
},
|
| 623 |
+
{
|
| 624 |
+
"path": "Clustering/Function_CommDetec/kcore_bd.m",
|
| 625 |
+
"sha256": "b61d5c1ca0e0d3786b2287bcf3a7f6e5f68a2292c250940a84d8105efc7bd1fb",
|
| 626 |
+
"language": "MATLAB",
|
| 627 |
+
"lines": 59,
|
| 628 |
+
"truncated": false,
|
| 629 |
+
"block": 1,
|
| 630 |
+
"row": 3053
|
| 631 |
+
},
|
| 632 |
+
{
|
| 633 |
+
"path": "Clustering/Function_CommDetec/kcore_bu.m",
|
| 634 |
+
"sha256": "5b7bb429320ea94fadd63ffc0446be88fabea3bddef08820d2f7606d23e132a7",
|
| 635 |
+
"language": "MATLAB",
|
| 636 |
+
"lines": 58,
|
| 637 |
+
"truncated": false,
|
| 638 |
+
"block": 1,
|
| 639 |
+
"row": 3047
|
| 640 |
+
},
|
| 641 |
+
{
|
| 642 |
+
"path": "Clustering/Function_CommDetec/kcoreness_centrality_bd.m",
|
| 643 |
+
"sha256": "3a7050258e5437793e69365f6a266b104f086ffaa817e77a187505dd465a049f",
|
| 644 |
+
"language": "MATLAB",
|
| 645 |
+
"lines": 27,
|
| 646 |
+
"truncated": false,
|
| 647 |
+
"block": 9,
|
| 648 |
+
"row": 3579
|
| 649 |
+
},
|
| 650 |
+
{
|
| 651 |
+
"path": "Clustering/Function_CommDetec/kcoreness_centrality_bu.m",
|
| 652 |
+
"sha256": "2d9613f08631e0458e124ff0f29f208f14d46c207c64348ec69c5ff7e8002b71",
|
| 653 |
+
"language": "MATLAB",
|
| 654 |
+
"lines": 34,
|
| 655 |
+
"truncated": false,
|
| 656 |
+
"block": 9,
|
| 657 |
+
"row": 3705
|
| 658 |
+
},
|
| 659 |
+
{
|
| 660 |
+
"path": "Clustering/Function_CommDetec/latmio_dir.m",
|
| 661 |
+
"sha256": "118933d0f727eb9b1fff8e12c3da0d2c982f8165dca5b29188b7ebc9b20636ed",
|
| 662 |
+
"language": "MATLAB",
|
| 663 |
+
"lines": 91,
|
| 664 |
+
"truncated": false,
|
| 665 |
+
"block": 9,
|
| 666 |
+
"row": 4516
|
| 667 |
+
},
|
| 668 |
+
{
|
| 669 |
+
"path": "Clustering/Function_CommDetec/latmio_dir_connected.m",
|
| 670 |
+
"sha256": "7cb802339868e9205dfe987b95c0accc883248677d955df83e6a226b81c3315c",
|
| 671 |
+
"language": "MATLAB",
|
| 672 |
+
"lines": 119,
|
| 673 |
+
"truncated": false,
|
| 674 |
+
"block": 9,
|
| 675 |
+
"row": 4863
|
| 676 |
+
},
|
| 677 |
+
{
|
| 678 |
+
"path": "Clustering/Function_CommDetec/latmio_und.m",
|
| 679 |
+
"sha256": "054d0a8e847ee152efdd890ab6be13c759c4ea2bd3ad2e61837510436a9df080",
|
| 680 |
+
"language": "MATLAB",
|
| 681 |
+
"lines": 109,
|
| 682 |
+
"truncated": false,
|
| 683 |
+
"block": 1,
|
| 684 |
+
"row": 3442
|
| 685 |
+
},
|
| 686 |
+
{
|
| 687 |
+
"path": "Clustering/Function_CommDetec/latmio_und_connected.m",
|
| 688 |
+
"sha256": "576ab31a5615c58efbeca2f5323914fb55a2398d57c650ea46003873285d92c1",
|
| 689 |
+
"language": "MATLAB",
|
| 690 |
+
"lines": 136,
|
| 691 |
+
"truncated": false,
|
| 692 |
+
"block": 1,
|
| 693 |
+
"row": 3609
|
| 694 |
+
},
|
| 695 |
+
{
|
| 696 |
+
"path": "Clustering/Function_CommDetec/link_communities.m",
|
| 697 |
+
"sha256": "5c8f65224d00f2e94c8c4fa8a426f6b84ad4c97acf2f882c4b29c358925f14c7",
|
| 698 |
+
"language": "MATLAB",
|
| 699 |
+
"lines": 150,
|
| 700 |
+
"truncated": false,
|
| 701 |
+
"block": 1,
|
| 702 |
+
"row": 3797
|
| 703 |
+
},
|
| 704 |
+
{
|
| 705 |
+
"path": "Clustering/Function_CommDetec/local_assortativity_wu_sign.m",
|
| 706 |
+
"sha256": "59d0390078faf166b0561ee74bb3dce3f334bbd7b552f9414c49fc4316cab031",
|
| 707 |
+
"language": "MATLAB",
|
| 708 |
+
"lines": 44,
|
| 709 |
+
"truncated": false,
|
| 710 |
+
"block": 1,
|
| 711 |
+
"row": 3032
|
| 712 |
+
},
|
| 713 |
+
{
|
| 714 |
+
"path": "Clustering/Function_CommDetec/make_motif34lib.m",
|
| 715 |
+
"sha256": "acfd5b445348d2a277c5fac9897e287b80db038b24392b8106bbb1d853e03787",
|
| 716 |
+
"language": "MATLAB",
|
| 717 |
+
"lines": 90,
|
| 718 |
+
"truncated": false,
|
| 719 |
+
"block": 9,
|
| 720 |
+
"row": 4528
|
| 721 |
+
},
|
| 722 |
+
{
|
| 723 |
+
"path": "Clustering/Function_CommDetec/makeevenCIJ.m",
|
| 724 |
+
"sha256": "760969ebb96fcacfab5c7fde4e2ba9ec329207c6c82d397e969383aa82a561f8",
|
| 725 |
+
"language": "MATLAB",
|
| 726 |
+
"lines": 75,
|
| 727 |
+
"truncated": false,
|
| 728 |
+
"block": 1,
|
| 729 |
+
"row": 3085
|
| 730 |
+
},
|
| 731 |
+
{
|
| 732 |
+
"path": "Clustering/Function_CommDetec/makefractalCIJ.m",
|
| 733 |
+
"sha256": "6a16eae64490b6016f0dcdd48509cca7d127c1fe992e95bc287a058848c3473c",
|
| 734 |
+
"language": "MATLAB",
|
| 735 |
+
"lines": 49,
|
| 736 |
+
"truncated": false,
|
| 737 |
+
"block": 1,
|
| 738 |
+
"row": 2911
|
| 739 |
+
},
|
| 740 |
+
{
|
| 741 |
+
"path": "Clustering/Function_CommDetec/makelatticeCIJ.m",
|
| 742 |
+
"sha256": "2bb61bcdced8f396913997f47884178b319b5ddcb9575928d42fba5b7806d6fc",
|
| 743 |
+
"language": "MATLAB",
|
| 744 |
+
"lines": 45,
|
| 745 |
+
"truncated": false,
|
| 746 |
+
"block": 1,
|
| 747 |
+
"row": 2812
|
| 748 |
+
},
|
| 749 |
+
{
|
| 750 |
+
"path": "Clustering/Function_CommDetec/makerandCIJ_dir.m",
|
| 751 |
+
"sha256": "5b243ea9e46f1de9ef0eb981403ef8d6b3360fa307faae2244b6083588698981",
|
| 752 |
+
"language": "MATLAB",
|
| 753 |
+
"lines": 24,
|
| 754 |
+
"truncated": false,
|
| 755 |
+
"block": 1,
|
| 756 |
+
"row": 2531
|
| 757 |
+
},
|
| 758 |
+
{
|
| 759 |
+
"path": "Clustering/Function_CommDetec/makerandCIJ_und.m",
|
| 760 |
+
"sha256": "dbacc6908a689b400e83f6b29d46504adb6729a25979401fcd7617e86687ac61",
|
| 761 |
+
"language": "MATLAB",
|
| 762 |
+
"lines": 25,
|
| 763 |
+
"truncated": false,
|
| 764 |
+
"block": 1,
|
| 765 |
+
"row": 2554
|
| 766 |
+
},
|
| 767 |
+
{
|
| 768 |
+
"path": "Clustering/Function_CommDetec/makerandCIJdegreesfixed.m",
|
| 769 |
+
"sha256": "1d9d415aa8f71b35d8b65937f3f4af334c11c9a21e3cfa74409238498e48f5eb",
|
| 770 |
+
"language": "MATLAB",
|
| 771 |
+
"lines": 81,
|
| 772 |
+
"truncated": false,
|
| 773 |
+
"block": 9,
|
| 774 |
+
"row": 4424
|
| 775 |
+
},
|
| 776 |
+
{
|
| 777 |
+
"path": "Clustering/Function_CommDetec/makeringlatticeCIJ.m",
|
| 778 |
+
"sha256": "e8e008085521f93f4b8e90ed9d06045c1f7d87e341cacf3509286ca7c3505c35",
|
| 779 |
+
"language": "MATLAB",
|
| 780 |
+
"lines": 47,
|
| 781 |
+
"truncated": false,
|
| 782 |
+
"block": 1,
|
| 783 |
+
"row": 2856
|
| 784 |
+
},
|
| 785 |
+
{
|
| 786 |
+
"path": "Clustering/Function_CommDetec/maketoeplitzCIJ.m",
|
| 787 |
+
"sha256": "653104a5d596967f6e7b967e638ea2d2bc52de373cc6e3e3323506ba93aa6e6c",
|
| 788 |
+
"language": "MATLAB",
|
| 789 |
+
"lines": 29,
|
| 790 |
+
"truncated": false,
|
| 791 |
+
"block": 1,
|
| 792 |
+
"row": 2729
|
| 793 |
+
},
|
| 794 |
+
{
|
| 795 |
+
"path": "Clustering/Function_CommDetec/matching_ind.m",
|
| 796 |
+
"sha256": "e237f6e10b0f022181facdd8ad2b2e5d91aafaa2c2c7320ab58d48b4b7a60331",
|
| 797 |
+
"language": "MATLAB",
|
| 798 |
+
"lines": 80,
|
| 799 |
+
"truncated": false,
|
| 800 |
+
"block": 1,
|
| 801 |
+
"row": 3152
|
| 802 |
+
},
|
| 803 |
+
{
|
| 804 |
+
"path": "Clustering/Function_CommDetec/matching_ind_und.m",
|
| 805 |
+
"sha256": "6b91103178a9c930beaf50ebc4bda5c838bb53ab5dd3b1579d8fc875cd3887fa",
|
| 806 |
+
"language": "MATLAB",
|
| 807 |
+
"lines": 39,
|
| 808 |
+
"truncated": false,
|
| 809 |
+
"block": 6,
|
| 810 |
+
"row": 6181
|
| 811 |
+
},
|
| 812 |
+
{
|
| 813 |
+
"path": "Clustering/Function_CommDetec/mean_first_passage_time.m",
|
| 814 |
+
"sha256": "ffb5ffd87c206678d7c61d398ce6fc0865607ecb0df30843990d28b369fac12a",
|
| 815 |
+
"language": "MATLAB",
|
| 816 |
+
"lines": 45,
|
| 817 |
+
"truncated": false,
|
| 818 |
+
"block": 1,
|
| 819 |
+
"row": 3095
|
| 820 |
+
},
|
| 821 |
+
{
|
| 822 |
+
"path": "Clustering/Function_CommDetec/mleme_constraint_model.m",
|
| 823 |
+
"sha256": "48da5148d5658ed6e7d4cf47dbf6fb85d88e1916efd9a58fe4a913ebf5436bcd",
|
| 824 |
+
"language": "MATLAB",
|
| 825 |
+
"lines": 284,
|
| 826 |
+
"truncated": false,
|
| 827 |
+
"block": 1,
|
| 828 |
+
"row": 3913
|
| 829 |
+
},
|
| 830 |
+
{
|
| 831 |
+
"path": "Clustering/Function_CommDetec/modularity_dir.m",
|
| 832 |
+
"sha256": "10499179d0fb5ddf83c21ef1b62739bd8e2071139554911832193073257cc7d3",
|
| 833 |
+
"language": "MATLAB",
|
| 834 |
+
"lines": 124,
|
| 835 |
+
"truncated": false,
|
| 836 |
+
"block": 9,
|
| 837 |
+
"row": 5070
|
| 838 |
+
},
|
| 839 |
+
{
|
| 840 |
+
"path": "Clustering/Function_CommDetec/modularity_und.m",
|
| 841 |
+
"sha256": "acf95c73348f420a0bce2a61ced59c35cf586d236abddd424f21572e5dc6fe8d",
|
| 842 |
+
"language": "MATLAB",
|
| 843 |
+
"lines": 122,
|
| 844 |
+
"truncated": false,
|
| 845 |
+
"block": 9,
|
| 846 |
+
"row": 5066
|
| 847 |
+
},
|
| 848 |
+
{
|
| 849 |
+
"path": "Clustering/Function_CommDetec/module_degree_zscore.m",
|
| 850 |
+
"sha256": "ed87dec9e24259042b0b872866532f91843952be1d644abde2074435c9986687",
|
| 851 |
+
"language": "MATLAB",
|
| 852 |
+
"lines": 41,
|
| 853 |
+
"truncated": false,
|
| 854 |
+
"block": 9,
|
| 855 |
+
"row": 3716
|
| 856 |
+
},
|
| 857 |
+
{
|
| 858 |
+
"path": "Clustering/Function_CommDetec/motif3funct_bin.m",
|
| 859 |
+
"sha256": "234dd9fe619046157bfa62e830859bc5c6fd619b0adeebd87504e8c2916290e9",
|
| 860 |
+
"language": "MATLAB",
|
| 861 |
+
"lines": 78,
|
| 862 |
+
"truncated": false,
|
| 863 |
+
"block": 9,
|
| 864 |
+
"row": 4617
|
| 865 |
+
},
|
| 866 |
+
{
|
| 867 |
+
"path": "Clustering/Function_CommDetec/motif3funct_wei.m",
|
| 868 |
+
"sha256": "a8f9135023782d9535570cba0b2d52536d0bb5476831a0c95ca456947bb418ea",
|
| 869 |
+
"language": "MATLAB",
|
| 870 |
+
"lines": 101,
|
| 871 |
+
"truncated": false,
|
| 872 |
+
"block": 9,
|
| 873 |
+
"row": 4964
|
| 874 |
+
},
|
| 875 |
+
{
|
| 876 |
+
"path": "Clustering/Function_CommDetec/motif3struct_bin.m",
|
| 877 |
+
"sha256": "827d44774a796204d233414a82bf34bef53ddc9553d8633029de3987bf2d5699",
|
| 878 |
+
"language": "MATLAB",
|
| 879 |
+
"lines": 56,
|
| 880 |
+
"truncated": false,
|
| 881 |
+
"block": 9,
|
| 882 |
+
"row": 4230
|
| 883 |
+
},
|
| 884 |
+
{
|
| 885 |
+
"path": "Clustering/Function_CommDetec/motif3struct_wei.m",
|
| 886 |
+
"sha256": "89ef6390bdb8a777792b11ef2c6b5539526beb9ccf73199b94d698aa35a006cd",
|
| 887 |
+
"language": "MATLAB",
|
| 888 |
+
"lines": 80,
|
| 889 |
+
"truncated": false,
|
| 890 |
+
"block": 9,
|
| 891 |
+
"row": 4657
|
| 892 |
+
},
|
| 893 |
+
{
|
| 894 |
+
"path": "Clustering/Function_CommDetec/motif4funct_bin.m",
|
| 895 |
+
"sha256": "e1e5e37c914ef1a0d003a965d948c6735be723c344a5f553052c77255c7fdf1f",
|
| 896 |
+
"language": "MATLAB",
|
| 897 |
+
"lines": 88,
|
| 898 |
+
"truncated": false,
|
| 899 |
+
"block": 9,
|
| 900 |
+
"row": 4777
|
| 901 |
+
},
|
| 902 |
+
{
|
| 903 |
+
"path": "Clustering/Function_CommDetec/motif4funct_wei.m",
|
| 904 |
+
"sha256": "db48db81adf9254cb1387b0d7eeea8146d039c7f2d2a532d96c7394a089cd566",
|
| 905 |
+
"language": "MATLAB",
|
| 906 |
+
"lines": 111,
|
| 907 |
+
"truncated": false,
|
| 908 |
+
"block": 9,
|
| 909 |
+
"row": 5080
|
| 910 |
+
},
|
| 911 |
+
{
|
| 912 |
+
"path": "Clustering/Function_CommDetec/motif4struct_bin.m",
|
| 913 |
+
"sha256": "076dab2857cdaccf4ecab363dfbb01be5f14f4384e641ca359756bb46789dba6",
|
| 914 |
+
"language": "MATLAB",
|
| 915 |
+
"lines": 65,
|
| 916 |
+
"truncated": false,
|
| 917 |
+
"block": 9,
|
| 918 |
+
"row": 4468
|
| 919 |
+
},
|
| 920 |
+
{
|
| 921 |
+
"path": "Clustering/Function_CommDetec/motif4struct_wei.m",
|
| 922 |
+
"sha256": "08c357d86266203855ae5f628ac66615090506b50d659e19888591ce38275e2d",
|
| 923 |
+
"language": "MATLAB",
|
| 924 |
+
"lines": 91,
|
| 925 |
+
"truncated": false,
|
| 926 |
+
"block": 9,
|
| 927 |
+
"row": 4868
|
| 928 |
+
},
|
| 929 |
+
{
|
| 930 |
+
"path": "Clustering/Function_CommDetec/navigation_wu.m",
|
| 931 |
+
"sha256": "134268950e137007fc95f1ca16fde6eb8baf7265020736c65c85639068d9c645",
|
| 932 |
+
"language": "MATLAB",
|
| 933 |
+
"lines": 112,
|
| 934 |
+
"truncated": false,
|
| 935 |
+
"block": 1,
|
| 936 |
+
"row": 3446
|
| 937 |
+
},
|
| 938 |
+
{
|
| 939 |
+
"path": "Clustering/Function_CommDetec/null_model_dir_sign.m",
|
| 940 |
+
"sha256": "d4f81d5cb7801140406b4f92c57e4204a80b6f43469168eeb93b9ee9057e670a",
|
| 941 |
+
"language": "MATLAB",
|
| 942 |
+
"lines": 188,
|
| 943 |
+
"truncated": false,
|
| 944 |
+
"block": 9,
|
| 945 |
+
"row": 5455
|
| 946 |
+
},
|
| 947 |
+
{
|
| 948 |
+
"path": "Clustering/Function_CommDetec/null_model_und_sign.m",
|
| 949 |
+
"sha256": "0585382acef560d9e016b4e6db1f1a4b145f10d4ad8b0f63ea3dc20fc3520727",
|
| 950 |
+
"language": "MATLAB",
|
| 951 |
+
"lines": 181,
|
| 952 |
+
"truncated": false,
|
| 953 |
+
"block": 9,
|
| 954 |
+
"row": 5429
|
| 955 |
+
},
|
| 956 |
+
{
|
| 957 |
+
"path": "Clustering/Function_CommDetec/pagerank_centrality.m",
|
| 958 |
+
"sha256": "e685d761d70dfc70e9cb18bd47b83e1a6f1aff5afd1925e741b66a7a3013e03d",
|
| 959 |
+
"language": "MATLAB",
|
| 960 |
+
"lines": 57,
|
| 961 |
+
"truncated": false,
|
| 962 |
+
"block": 1,
|
| 963 |
+
"row": 3120
|
| 964 |
+
},
|
| 965 |
+
{
|
| 966 |
+
"path": "Clustering/Function_CommDetec/participation_coef.m",
|
| 967 |
+
"sha256": "f0d64636004f46ddc950a2f2f86801c9bdc505e9c5f82d87fae6f4cd867f1627",
|
| 968 |
+
"language": "MATLAB",
|
| 969 |
+
"lines": 49,
|
| 970 |
+
"truncated": false,
|
| 971 |
+
"block": 9,
|
| 972 |
+
"row": 3960
|
| 973 |
+
},
|
| 974 |
+
{
|
| 975 |
+
"path": "Clustering/Function_CommDetec/participation_coef_sign.m",
|
| 976 |
+
"sha256": "2c788d953c9a18c5363d138bd38eac1c24aef8c6c959ed094d57179e5c275b78",
|
| 977 |
+
"language": "MATLAB",
|
| 978 |
+
"lines": 47,
|
| 979 |
+
"truncated": false,
|
| 980 |
+
"block": 9,
|
| 981 |
+
"row": 3955
|
| 982 |
+
},
|
| 983 |
+
{
|
| 984 |
+
"path": "Clustering/Function_CommDetec/partition_distance.m",
|
| 985 |
+
"sha256": "1b9234bed3576bd36de112d12f84db6666de051356d79dd4946a00e77c968399",
|
| 986 |
+
"language": "MATLAB",
|
| 987 |
+
"lines": 97,
|
| 988 |
+
"truncated": false,
|
| 989 |
+
"block": 9,
|
| 990 |
+
"row": 4590
|
| 991 |
+
},
|
| 992 |
+
{
|
| 993 |
+
"path": "Clustering/Function_CommDetec/path_transitivity.m",
|
| 994 |
+
"sha256": "8d3e402f1202a09c56c28129db63c2ba2ed4ea50fa87ba09ddfb5573785723b1",
|
| 995 |
+
"language": "MATLAB",
|
| 996 |
+
"lines": 84,
|
| 997 |
+
"truncated": false,
|
| 998 |
+
"block": 1,
|
| 999 |
+
"row": 3102
|
| 1000 |
+
},
|
| 1001 |
+
{
|
| 1002 |
+
"path": "Clustering/Function_CommDetec/predict_fc.m",
|
| 1003 |
+
"sha256": "3271f477e1dc02c7bd794823362be004cee869e618e3acbdf555935d4495e59a",
|
| 1004 |
+
"language": "MATLAB",
|
| 1005 |
+
"lines": 228,
|
| 1006 |
+
"truncated": false,
|
| 1007 |
+
"block": 1,
|
| 1008 |
+
"row": 3992
|
| 1009 |
+
},
|
| 1010 |
+
{
|
| 1011 |
+
"path": "Clustering/Function_CommDetec/quasi_idempotence.m",
|
| 1012 |
+
"sha256": "a7fdcc2505225df4498cd65f3ac134e8b856a02e5ff3face02d5602f1db413a6",
|
| 1013 |
+
"language": "MATLAB",
|
| 1014 |
+
"lines": 110,
|
| 1015 |
+
"truncated": false,
|
| 1016 |
+
"block": 1,
|
| 1017 |
+
"row": 3548
|
| 1018 |
+
},
|
| 1019 |
+
{
|
| 1020 |
+
"path": "Clustering/Function_CommDetec/randmio_dir.m",
|
| 1021 |
+
"sha256": "ddc88ae2b8c82ae877cd94b6afcc8eefc220b1534e3e5e9bfdfe689f93bfab59",
|
| 1022 |
+
"language": "MATLAB",
|
| 1023 |
+
"lines": 70,
|
| 1024 |
+
"truncated": false,
|
| 1025 |
+
"block": 9,
|
| 1026 |
+
"row": 4222
|
| 1027 |
+
},
|
| 1028 |
+
{
|
| 1029 |
+
"path": "Clustering/Function_CommDetec/randmio_dir_connected.m",
|
| 1030 |
+
"sha256": "1edd0d055878b95e85737dea73df88e98e9540397f85b69f0deb681f87728ae5",
|
| 1031 |
+
"language": "MATLAB",
|
| 1032 |
+
"lines": 98,
|
| 1033 |
+
"truncated": false,
|
| 1034 |
+
"block": 6,
|
| 1035 |
+
"row": 12631
|
| 1036 |
+
},
|
| 1037 |
+
{
|
| 1038 |
+
"path": "Clustering/Function_CommDetec/randmio_dir_signed.m",
|
| 1039 |
+
"sha256": "5f7e71844b6679a97dab7565d8606ebbc092c47054038d4ec90f1fbb465d1960",
|
| 1040 |
+
"language": "MATLAB",
|
| 1041 |
+
"lines": 80,
|
| 1042 |
+
"truncated": false,
|
| 1043 |
+
"block": 9,
|
| 1044 |
+
"row": 4475
|
| 1045 |
+
},
|
| 1046 |
+
{
|
| 1047 |
+
"path": "Clustering/Function_CommDetec/randmio_und.m",
|
| 1048 |
+
"sha256": "95e95d2f5a2228f567b941ccb654368c5276781cd3d0c0c869105f8e3cde1b61",
|
| 1049 |
+
"language": "MATLAB",
|
| 1050 |
+
"lines": 80,
|
| 1051 |
+
"truncated": false,
|
| 1052 |
+
"block": 9,
|
| 1053 |
+
"row": 4384
|
| 1054 |
+
},
|
| 1055 |
+
{
|
| 1056 |
+
"path": "Clustering/Function_CommDetec/randmio_und_connected.m",
|
| 1057 |
+
"sha256": "27ca8a49c9d53cc8f31e42f43f3e65a8250d4fb07efb96631f366340d305c997",
|
| 1058 |
+
"language": "MATLAB",
|
| 1059 |
+
"lines": 107,
|
| 1060 |
+
"truncated": false,
|
| 1061 |
+
"block": 9,
|
| 1062 |
+
"row": 4715
|
| 1063 |
+
},
|
| 1064 |
+
{
|
| 1065 |
+
"path": "Clustering/Function_CommDetec/randmio_und_signed.m",
|
| 1066 |
+
"sha256": "9db1b0d597e428429e67747bc6923af3edd620425f90bec833a2ff0fff8ed7d6",
|
| 1067 |
+
"language": "MATLAB",
|
| 1068 |
+
"lines": 80,
|
| 1069 |
+
"truncated": false,
|
| 1070 |
+
"block": 9,
|
| 1071 |
+
"row": 4472
|
| 1072 |
+
},
|
| 1073 |
+
{
|
| 1074 |
+
"path": "Clustering/Function_CommDetec/randomize_graph_partial_und.m",
|
| 1075 |
+
"sha256": "5ea151b127cd130ba8fc8e4f5584adf87070ef16d800fcdf13cb1a76c4a454a1",
|
| 1076 |
+
"language": "MATLAB",
|
| 1077 |
+
"lines": 53,
|
| 1078 |
+
"truncated": false,
|
| 1079 |
+
"block": 9,
|
| 1080 |
+
"row": 4002
|
| 1081 |
+
},
|
| 1082 |
+
{
|
| 1083 |
+
"path": "Clustering/Function_CommDetec/randomizer_bin_und.m",
|
| 1084 |
+
"sha256": "0a220c660deb509765a365f7543613406603848842ca01810a82865e4b04459f",
|
| 1085 |
+
"language": "MATLAB",
|
| 1086 |
+
"lines": 140,
|
| 1087 |
+
"truncated": false,
|
| 1088 |
+
"block": 1,
|
| 1089 |
+
"row": 3514
|
| 1090 |
+
},
|
| 1091 |
+
{
|
| 1092 |
+
"path": "Clustering/Function_CommDetec/reachdist.m",
|
| 1093 |
+
"sha256": "cb97bd1d355056f0928a6a165f4bc66f9fa9d9a8ff8241921902dc5f6aca7e43",
|
| 1094 |
+
"language": "MATLAB",
|
| 1095 |
+
"lines": 68,
|
| 1096 |
+
"truncated": false,
|
| 1097 |
+
"block": 9,
|
| 1098 |
+
"row": 4210
|
| 1099 |
+
},
|
| 1100 |
+
{
|
| 1101 |
+
"path": "Clustering/Function_CommDetec/rentian_scaling_2d.m",
|
| 1102 |
+
"sha256": "0e92436c88914e8fc7896d27a73652cfb09ab3c28f7df5260bf87074b585c470",
|
| 1103 |
+
"language": "MATLAB",
|
| 1104 |
+
"lines": 197,
|
| 1105 |
+
"truncated": false,
|
| 1106 |
+
"block": 1,
|
| 1107 |
+
"row": 3915
|
| 1108 |
+
},
|
| 1109 |
+
{
|
| 1110 |
+
"path": "Clustering/Function_CommDetec/rentian_scaling_3d.m",
|
| 1111 |
+
"sha256": "5eb65d2fb8e04710138c9b61b921149d656d12bce5fbc47ad2fd5c22a507df0d",
|
| 1112 |
+
"language": "MATLAB",
|
| 1113 |
+
"lines": 209,
|
| 1114 |
+
"truncated": false,
|
| 1115 |
+
"block": 1,
|
| 1116 |
+
"row": 3962
|
| 1117 |
+
},
|
| 1118 |
+
{
|
| 1119 |
+
"path": "Clustering/Function_CommDetec/reorderMAT.m",
|
| 1120 |
+
"sha256": "322c4aa2e7180f16fcd991c8ed35fe83a2ea7c0988902d8ba574386ba996d027",
|
| 1121 |
+
"language": "MATLAB",
|
| 1122 |
+
"lines": 64,
|
| 1123 |
+
"truncated": false,
|
| 1124 |
+
"block": 9,
|
| 1125 |
+
"row": 4111
|
| 1126 |
+
},
|
| 1127 |
+
{
|
| 1128 |
+
"path": "Clustering/Function_CommDetec/reorder_matrix.m",
|
| 1129 |
+
"sha256": "372cd94f4db2d820831109b9dc33b3ef238aca12f6b914c7574ae57e9befcf24",
|
| 1130 |
+
"language": "MATLAB",
|
| 1131 |
+
"lines": 105,
|
| 1132 |
+
"truncated": false,
|
| 1133 |
+
"block": 1,
|
| 1134 |
+
"row": 3464
|
| 1135 |
+
},
|
| 1136 |
+
{
|
| 1137 |
+
"path": "Clustering/Function_CommDetec/reorder_mod.m",
|
| 1138 |
+
"sha256": "2ac55981717db0818f70659c863f55139712f875b4cb3f1135f9b3f8fdc3c024",
|
| 1139 |
+
"language": "MATLAB",
|
| 1140 |
+
"lines": 107,
|
| 1141 |
+
"truncated": false,
|
| 1142 |
+
"block": 9,
|
| 1143 |
+
"row": 4665
|
| 1144 |
+
},
|
| 1145 |
+
{
|
| 1146 |
+
"path": "Clustering/Function_CommDetec/resource_efficiency_bin.m",
|
| 1147 |
+
"sha256": "2f8338f3037338981271d779652b3c4dc9eaf57280527666da510403f15bdf64",
|
| 1148 |
+
"language": "MATLAB",
|
| 1149 |
+
"lines": 140,
|
| 1150 |
+
"truncated": false,
|
| 1151 |
+
"block": 9,
|
| 1152 |
+
"row": 4726
|
| 1153 |
+
},
|
| 1154 |
+
{
|
| 1155 |
+
"path": "Clustering/Function_CommDetec/retrieve_shortest_path.m",
|
| 1156 |
+
"sha256": "bb9a3bb0c3787d9b159428c58de92681608d6e506b6d87cfcaa92241b8dad03e",
|
| 1157 |
+
"language": "MATLAB",
|
| 1158 |
+
"lines": 37,
|
| 1159 |
+
"truncated": false,
|
| 1160 |
+
"block": 9,
|
| 1161 |
+
"row": 3778
|
| 1162 |
+
},
|
| 1163 |
+
{
|
| 1164 |
+
"path": "Clustering/Function_CommDetec/rich_club_bd.m",
|
| 1165 |
+
"sha256": "5ae94b5096fc662236efe273bd14c91c79c9b9ab0ad5118081acea58a940eff3",
|
| 1166 |
+
"language": "MATLAB",
|
| 1167 |
+
"lines": 53,
|
| 1168 |
+
"truncated": false,
|
| 1169 |
+
"block": 1,
|
| 1170 |
+
"row": 3163
|
| 1171 |
+
},
|
| 1172 |
+
{
|
| 1173 |
+
"path": "Clustering/Function_CommDetec/rich_club_bu.m",
|
| 1174 |
+
"sha256": "23a01ae4164094721ce73025582797e6e25855f83708a677c8d5940689ace59c",
|
| 1175 |
+
"language": "MATLAB",
|
| 1176 |
+
"lines": 49,
|
| 1177 |
+
"truncated": false,
|
| 1178 |
+
"block": 1,
|
| 1179 |
+
"row": 3122
|
| 1180 |
+
},
|
| 1181 |
+
{
|
| 1182 |
+
"path": "Clustering/Function_CommDetec/rich_club_wd.m",
|
| 1183 |
+
"sha256": "211599ade605e3958cd1ea766349bd6927ba3c0fbb3029ea506efcf4a23da0f4",
|
| 1184 |
+
"language": "MATLAB",
|
| 1185 |
+
"lines": 75,
|
| 1186 |
+
"truncated": false,
|
| 1187 |
+
"block": 1,
|
| 1188 |
+
"row": 3130
|
| 1189 |
+
},
|
| 1190 |
+
{
|
| 1191 |
+
"path": "Clustering/Function_CommDetec/rich_club_wu.m",
|
| 1192 |
+
"sha256": "427294598188d97899e3c5a1d03fc7271e87f72b4e8a3ad0e7c67b91c59dc648",
|
| 1193 |
+
"language": "MATLAB",
|
| 1194 |
+
"lines": 72,
|
| 1195 |
+
"truncated": false,
|
| 1196 |
+
"block": 1,
|
| 1197 |
+
"row": 3129
|
| 1198 |
+
},
|
| 1199 |
+
{
|
| 1200 |
+
"path": "Clustering/Function_CommDetec/rout_efficiency.m",
|
| 1201 |
+
"sha256": "d9c5dd0bd5c72cca7eab1586182d0f9a83c7e65eb2f4957327178386bc8b6a58",
|
| 1202 |
+
"language": "MATLAB",
|
| 1203 |
+
"lines": 87,
|
| 1204 |
+
"truncated": false,
|
| 1205 |
+
"block": 1,
|
| 1206 |
+
"row": 3263
|
| 1207 |
+
},
|
| 1208 |
+
{
|
| 1209 |
+
"path": "Clustering/Function_CommDetec/score_wu.m",
|
| 1210 |
+
"sha256": "2aa1b745982f8e0299fc599a99061d1de7c9deb49a5d4246492002e6609f8a13",
|
| 1211 |
+
"language": "MATLAB",
|
| 1212 |
+
"lines": 40,
|
| 1213 |
+
"truncated": false,
|
| 1214 |
+
"block": 1,
|
| 1215 |
+
"row": 2847
|
| 1216 |
+
},
|
| 1217 |
+
{
|
| 1218 |
+
"path": "Clustering/Function_CommDetec/search_information.m",
|
| 1219 |
+
"sha256": "1870f0c01643338757d7b961c09a5dea6810c40a7f0c1a8cbaae1e7a644efb14",
|
| 1220 |
+
"language": "MATLAB",
|
| 1221 |
+
"lines": 117,
|
| 1222 |
+
"truncated": false,
|
| 1223 |
+
"block": 9,
|
| 1224 |
+
"row": 4832
|
| 1225 |
+
},
|
| 1226 |
+
{
|
| 1227 |
+
"path": "Clustering/Function_CommDetec/strengths_dir.m",
|
| 1228 |
+
"sha256": "eee6c715f70be79d48eee0cda14f456015997662714353daaeb55c39eadb8ce3",
|
| 1229 |
+
"language": "MATLAB",
|
| 1230 |
+
"lines": 27,
|
| 1231 |
+
"truncated": false,
|
| 1232 |
+
"block": 1,
|
| 1233 |
+
"row": 2691
|
| 1234 |
+
},
|
| 1235 |
+
{
|
| 1236 |
+
"path": "Clustering/Function_CommDetec/strengths_und.m",
|
| 1237 |
+
"sha256": "6e34d6de977c21497b3d1d9d89bb1c682aaa272f47eeb9cd904e97dd160a9565",
|
| 1238 |
+
"language": "MATLAB",
|
| 1239 |
+
"lines": 18,
|
| 1240 |
+
"truncated": false,
|
| 1241 |
+
"block": 1,
|
| 1242 |
+
"row": 2444
|
| 1243 |
+
},
|
| 1244 |
+
{
|
| 1245 |
+
"path": "Clustering/Function_CommDetec/strengths_und_sign.m",
|
| 1246 |
+
"sha256": "5f750b5a68863fe578f9983dd9f1fc326dcfc998e0263153a57b25ec3c17b6e0",
|
| 1247 |
+
"language": "MATLAB",
|
| 1248 |
+
"lines": 30,
|
| 1249 |
+
"truncated": false,
|
| 1250 |
+
"block": 9,
|
| 1251 |
+
"row": 3597
|
| 1252 |
+
},
|
| 1253 |
+
{
|
| 1254 |
+
"path": "Clustering/Function_CommDetec/subgraph_centrality.m",
|
| 1255 |
+
"sha256": "773a0149227ffc0149c265c0c4973edf2456599a453ed6e814c58b1cebc36608",
|
| 1256 |
+
"language": "MATLAB",
|
| 1257 |
+
"lines": 24,
|
| 1258 |
+
"truncated": false,
|
| 1259 |
+
"block": 1,
|
| 1260 |
+
"row": 2791
|
| 1261 |
+
},
|
| 1262 |
+
{
|
| 1263 |
+
"path": "Clustering/Function_CommDetec/threshold_absolute.m",
|
| 1264 |
+
"sha256": "a7ff8ba040f30ba46791a3798832ed56c44397af1ac07a979c261cc8bdfdbc3f",
|
| 1265 |
+
"language": "MATLAB",
|
| 1266 |
+
"lines": 19,
|
| 1267 |
+
"truncated": false,
|
| 1268 |
+
"block": 6,
|
| 1269 |
+
"row": 4847
|
| 1270 |
+
},
|
| 1271 |
+
{
|
| 1272 |
+
"path": "Clustering/Function_CommDetec/threshold_proportional.m",
|
| 1273 |
+
"sha256": "782a7be5dc218007f2d6b145b134073464f27d1da27da1687f8e62116581443a",
|
| 1274 |
+
"language": "MATLAB",
|
| 1275 |
+
"lines": 45,
|
| 1276 |
+
"truncated": false,
|
| 1277 |
+
"block": 6,
|
| 1278 |
+
"row": 9143
|
| 1279 |
+
},
|
| 1280 |
+
{
|
| 1281 |
+
"path": "Clustering/Function_CommDetec/transitivity_bd.m",
|
| 1282 |
+
"sha256": "8587ee766f50a56f2831c3ff28d0500c24a8343e9626791c9a3840c5c4f829be",
|
| 1283 |
+
"language": "MATLAB",
|
| 1284 |
+
"lines": 41,
|
| 1285 |
+
"truncated": false,
|
| 1286 |
+
"block": 9,
|
| 1287 |
+
"row": 4109
|
| 1288 |
+
},
|
| 1289 |
+
{
|
| 1290 |
+
"path": "Clustering/Function_CommDetec/transitivity_bu.m",
|
| 1291 |
+
"sha256": "70bec558fba0d175227dac840bb833567fc167e17e6256486689d85712c6d536",
|
| 1292 |
+
"language": "MATLAB",
|
| 1293 |
+
"lines": 20,
|
| 1294 |
+
"truncated": false,
|
| 1295 |
+
"block": 9,
|
| 1296 |
+
"row": 3277
|
| 1297 |
+
},
|
| 1298 |
+
{
|
| 1299 |
+
"path": "Clustering/Function_CommDetec/transitivity_wd.m",
|
| 1300 |
+
"sha256": "b18426da028b94927a54e93d7523f68a6b3169fc3bd298de1b0d70d1ca93a914",
|
| 1301 |
+
"language": "MATLAB",
|
| 1302 |
+
"lines": 47,
|
| 1303 |
+
"truncated": false,
|
| 1304 |
+
"block": 9,
|
| 1305 |
+
"row": 4121
|
| 1306 |
+
},
|
| 1307 |
+
{
|
| 1308 |
+
"path": "Clustering/Function_CommDetec/transitivity_wu.m",
|
| 1309 |
+
"sha256": "75c4070f8e23056685d0dbe1e79baa2abb95383979c3e58c4fdf79b38b3f8f3c",
|
| 1310 |
+
"language": "MATLAB",
|
| 1311 |
+
"lines": 29,
|
| 1312 |
+
"truncated": false,
|
| 1313 |
+
"block": 9,
|
| 1314 |
+
"row": 3592
|
| 1315 |
+
},
|
| 1316 |
+
{
|
| 1317 |
+
"path": "Clustering/Function_CommDetec/weight_conversion.m",
|
| 1318 |
+
"sha256": "1eb6b2ff5e3a5c67b60c113928cf0bdb521713e1e040d4bb9c28471de85c5598",
|
| 1319 |
+
"language": "MATLAB",
|
| 1320 |
+
"lines": 88,
|
| 1321 |
+
"truncated": false,
|
| 1322 |
+
"block": 9,
|
| 1323 |
+
"row": 4643
|
| 1324 |
+
},
|
| 1325 |
+
{
|
| 1326 |
+
"path": "Clustering/Function_CommDetec/writetoPAJ.m",
|
| 1327 |
+
"sha256": "7a8cf855920b01ed8107389eecdc5df6a694b69e3906107ee8d660cc2dffb5e7",
|
| 1328 |
+
"language": "MATLAB",
|
| 1329 |
+
"lines": 41,
|
| 1330 |
+
"truncated": false,
|
| 1331 |
+
"block": 9,
|
| 1332 |
+
"row": 3546
|
| 1333 |
+
},
|
| 1334 |
+
{
|
| 1335 |
+
"path": "Clustering/Summarize_result.m",
|
| 1336 |
+
"sha256": "652820b6e607469a6d6c4b9c26ae1ceebd9f3033b91fe97e97c415929fb11a87",
|
| 1337 |
+
"language": "MATLAB",
|
| 1338 |
+
"lines": 146,
|
| 1339 |
+
"truncated": false,
|
| 1340 |
+
"block": 19,
|
| 1341 |
+
"row": 7143
|
| 1342 |
+
},
|
| 1343 |
+
{
|
| 1344 |
+
"path": "LICENSE",
|
| 1345 |
+
"sha256": "c71d239df91726fc519c6eb72d318ec65820627232b2f796219e87dcf35d0ab4",
|
| 1346 |
+
"language": "License",
|
| 1347 |
+
"lines": 201,
|
| 1348 |
+
"truncated": false,
|
| 1349 |
+
"block": 1,
|
| 1350 |
+
"row": 2216
|
| 1351 |
+
},
|
| 1352 |
+
{
|
| 1353 |
+
"path": "Multilevel_statistic/Analysis_Develop_WT/Citation.R",
|
| 1354 |
+
"sha256": "d155fd79bd69047199dd4b48fc471ac0b3fbe7691eacdea3224973de9da9fd96",
|
| 1355 |
+
"language": "R",
|
| 1356 |
+
"lines": 89,
|
| 1357 |
+
"truncated": false,
|
| 1358 |
+
"block": 19,
|
| 1359 |
+
"row": 14825
|
| 1360 |
+
},
|
| 1361 |
+
{
|
| 1362 |
+
"path": "Multilevel_statistic/Analysis_Develop_WT/Run_Develop_Kmean.R",
|
| 1363 |
+
"sha256": "ddc6a7c005cc124678974a3a9a0afc7fd5f29f89d7e43b7ca5f110b1c58b1514",
|
| 1364 |
+
"language": "R",
|
| 1365 |
+
"lines": 131,
|
| 1366 |
+
"truncated": false,
|
| 1367 |
+
"block": 19,
|
| 1368 |
+
"row": 14874
|
| 1369 |
+
},
|
| 1370 |
+
{
|
| 1371 |
+
"path": "Multilevel_statistic/Analysis_Develop_WT/Visualizing_result.Rmd",
|
| 1372 |
+
"sha256": "f16689dce02d651e02787662b6d2e1afd388c790624c60fcafef1b6ac0bcfcb4",
|
| 1373 |
+
"language": "R",
|
| 1374 |
+
"lines": 173,
|
| 1375 |
+
"truncated": false,
|
| 1376 |
+
"block": 19,
|
| 1377 |
+
"row": 14902
|
| 1378 |
+
},
|
| 1379 |
+
{
|
| 1380 |
+
"path": "Multilevel_statistic/Analysis_Develop_WT/src/Develop_Function.R",
|
| 1381 |
+
"sha256": "4bb11091aabd245c71098dcaea707608133b05c82e6d3da319080067e9c95339",
|
| 1382 |
+
"language": "R",
|
| 1383 |
+
"lines": 319,
|
| 1384 |
+
"truncated": false,
|
| 1385 |
+
"block": 19,
|
| 1386 |
+
"row": 15048
|
| 1387 |
+
},
|
| 1388 |
+
{
|
| 1389 |
+
"path": "Multilevel_statistic/Analysis_Develop_WT/src/Develop_Function_posthoc.R",
|
| 1390 |
+
"sha256": "5084e70ca98996535e527f960d7e0735d12d87aa29b47e9b471a62a6d2c578c7",
|
| 1391 |
+
"language": "R",
|
| 1392 |
+
"lines": 412,
|
| 1393 |
+
"truncated": false,
|
| 1394 |
+
"block": 19,
|
| 1395 |
+
"row": 15088
|
| 1396 |
+
},
|
| 1397 |
+
{
|
| 1398 |
+
"path": "Multilevel_statistic/Analysis_WT_Dlx_GsDREADD/Run_Kmean_CovM_WT_Dlx_GsDREADD.R",
|
| 1399 |
+
"sha256": "677d2f52ac4d1fde35cdc35827efda16df55915d25098b534e1b5aa2aabd9e5f",
|
| 1400 |
+
"language": "R",
|
| 1401 |
+
"lines": 119,
|
| 1402 |
+
"truncated": false,
|
| 1403 |
+
"block": 19,
|
| 1404 |
+
"row": 14845
|
| 1405 |
+
},
|
| 1406 |
+
{
|
| 1407 |
+
"path": "Multilevel_statistic/Analysis_WT_Dlx_GsDREADD/Visualizing_result_GsDREADD.Rmd",
|
| 1408 |
+
"sha256": "b513f88df2ae5d44889b9983b558240755e41194b6f82f89750b7d482bc213b0",
|
| 1409 |
+
"language": "R",
|
| 1410 |
+
"lines": 147,
|
| 1411 |
+
"truncated": false,
|
| 1412 |
+
"block": 19,
|
| 1413 |
+
"row": 14870
|
| 1414 |
+
},
|
| 1415 |
+
{
|
| 1416 |
+
"path": "Multilevel_statistic/Analysis_WT_Dlx_GsDREADD/src/WT_Dlx_GsDREADD_Function.R",
|
| 1417 |
+
"sha256": "67d604efc404dfa120ad247f777cf2218507373f56394d0b7e38fad98ff65705",
|
| 1418 |
+
"language": "R",
|
| 1419 |
+
"lines": 197,
|
| 1420 |
+
"truncated": false,
|
| 1421 |
+
"block": 19,
|
| 1422 |
+
"row": 14946
|
| 1423 |
+
},
|
| 1424 |
+
{
|
| 1425 |
+
"path": "Multilevel_statistic/Analysis_WT_Dlx_GsDREADD/src/WT_Dlx_GsDREADD_Function_posthoc.R",
|
| 1426 |
+
"sha256": "c41ecd9b891b6a71c3b593580a1bf4daa4a1b7814dac047c356c6eabeefa6265",
|
| 1427 |
+
"language": "R",
|
| 1428 |
+
"lines": 446,
|
| 1429 |
+
"truncated": false,
|
| 1430 |
+
"block": 19,
|
| 1431 |
+
"row": 15101
|
| 1432 |
+
},
|
| 1433 |
+
{
|
| 1434 |
+
"path": "Multilevel_statistic/Analysis_WT_Dlx_GsDREADD/src/backup/WT_Dlx_GsDREADD_Function_20230211_caseboot.R",
|
| 1435 |
+
"sha256": "8f7367efbde79b65b64d7ae7a771119b980fc22614a3b8739c639dae80897c62",
|
| 1436 |
+
"language": "R",
|
| 1437 |
+
"lines": 200,
|
| 1438 |
+
"truncated": false,
|
| 1439 |
+
"block": 19,
|
| 1440 |
+
"row": 14932
|
| 1441 |
+
},
|
| 1442 |
+
{
|
| 1443 |
+
"path": "Multilevel_statistic/Analysis_WT_Dlx_GsDREADD/src/backup/WT_Dlx_GsDREADD_Function_posthoc_20240503.R",
|
| 1444 |
+
"sha256": "522a41254c38ffdd36065457e5deae60acbd6b8bbeb45fe8314f7651068d65db",
|
| 1445 |
+
"language": "R",
|
| 1446 |
+
"lines": 305,
|
| 1447 |
+
"truncated": false,
|
| 1448 |
+
"block": 19,
|
| 1449 |
+
"row": 15036
|
| 1450 |
+
},
|
| 1451 |
+
{
|
| 1452 |
+
"path": "README.md",
|
| 1453 |
+
"sha256": "945662e463c5704fa6a2484783876810e255378f5fa9f6f33309aff20d68af0e",
|
| 1454 |
+
"language": "Text",
|
| 1455 |
+
"lines": 191,
|
| 1456 |
+
"truncated": false,
|
| 1457 |
+
"block": 19,
|
| 1458 |
+
"row": 16168
|
| 1459 |
+
}
|
| 1460 |
+
]
|
| 1461 |
+
}
|
manifests/1c/zenodo__15526615.json
ADDED
|
@@ -0,0 +1,21 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:15526615",
|
| 4 |
+
"url": "https://zenodo.org/records/15526615",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "README.md",
|
| 13 |
+
"sha256": "ecf116290a5e3ededc3c7dee2a67f41dbf510dccbe8a12ff708b1877b9b2bb71",
|
| 14 |
+
"language": "Text",
|
| 15 |
+
"lines": 113,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 16102
|
| 19 |
+
}
|
| 20 |
+
]
|
| 21 |
+
}
|
manifests/1d/github.com__hpwei82__2022_hpwei.json
ADDED
|
@@ -0,0 +1,183 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/hpwei82/2022_hpwei",
|
| 4 |
+
"url": "https://github.com/hpwei82/2022_hpwei",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "5c38d463dfb50989c0f199567ff34de05a816951",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "CreationOfTemplate.m",
|
| 13 |
+
"sha256": "cb2f249337de11918df1b853c55000bc1c1c02033242fbdc20123b8568ee4c42",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 178,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 7710
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "CreationOfTemplateSingle.m",
|
| 22 |
+
"sha256": "d632bdea972fb7efa17d878c5b34b8bbf8180f92996aefad48276e34c6cf9d62",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 74,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 6350
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "DataAnalysis.m",
|
| 31 |
+
"sha256": "1d43c94a253ff6759e9bf8bc1127c2e654d4e734afb9bf2838b12ed628683fe7",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 102,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 6529
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "FluorescenceChange.m",
|
| 40 |
+
"sha256": "6dd13d6eda9c6ec0af933da665a0912ecc992905378404dfc1f97e6739a26f6e",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 62,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 5847
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "ImageRegistrationGUI.m",
|
| 49 |
+
"sha256": "722d3c6fc15cd1c99ff4ca6562f9264490dbe23d92085393b6833466a33c3e24",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 260,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 7718
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "LICENSE",
|
| 58 |
+
"sha256": "762a1ced6e9b2d87d3a1af1b88c63bfe773408a29f3c9fbee71020327a9786b1",
|
| 59 |
+
"language": "License",
|
| 60 |
+
"lines": 21,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 4173
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "OpenImages.m",
|
| 67 |
+
"sha256": "4b93364b3e67afaf8a98c7884942f3afcd3908ad6cc75ef0bae73cf80fa12f4e",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 35,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 5286
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "PlayMovie.m",
|
| 76 |
+
"sha256": "24455257351f73512cbc48987534df0f5b005b30fa43570a646b7b8633aa2692",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 4,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 4369
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "Readme.txt",
|
| 85 |
+
"sha256": "90309d34b35a3ed706adb3e7139849486ee003cc4838990a664ae7ed3c9d0d71",
|
| 86 |
+
"language": "Text",
|
| 87 |
+
"lines": 9,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 15972
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "RegisterAllTrials.m",
|
| 94 |
+
"sha256": "44094c325626743733684828e991089703ccc825e911f0551f9a89cbba9461a2",
|
| 95 |
+
"language": "MATLAB",
|
| 96 |
+
"lines": 234,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 7849
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "RegisterAllTrialsSingle.m",
|
| 103 |
+
"sha256": "8f6b5dc041c63925aaabbe974d54460beefaf4c2f24e9f8f4a1ed330a2ae0b41",
|
| 104 |
+
"language": "MATLAB",
|
| 105 |
+
"lines": 125,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 6907
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "SettingTheROI.m",
|
| 112 |
+
"sha256": "1aa82abf38b9a097e1c6e7cfedecbe1e65d718cf2cce7a72a87f5c7776b3cbf4",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 23,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 4769
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "ThreeDimensionalRegistration.m",
|
| 121 |
+
"sha256": "0ab01a1fd55bdbb1746cb0c6d621d1a0665971ac688d2c16458d73c733729320",
|
| 122 |
+
"language": "MATLAB",
|
| 123 |
+
"lines": 53,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 5702
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "analyzed_video_data_to_csv.py",
|
| 130 |
+
"sha256": "c4e897cb5eeb02dbad3be8a6c31b1dbfff09676fe8bca3b3537535acd1622799",
|
| 131 |
+
"language": "Python",
|
| 132 |
+
"lines": 39,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 9197
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "combined_clustering (figure s1).ipynb",
|
| 139 |
+
"sha256": "0b81cf3265a14c3c1332489b13ede2f5052c0bfb88b1aa03d31179094d20b8a9",
|
| 140 |
+
"language": "Jupyter",
|
| 141 |
+
"lines": 297,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 3984
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "odor_trajectory_clustering (figure s1).ipynb",
|
| 148 |
+
"sha256": "6d242ba970db08f16e7161853256301f0ca8126263be4f2ccde5e86ae8cfbb0c",
|
| 149 |
+
"language": "Jupyter",
|
| 150 |
+
"lines": 256,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 3951
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "per_analysis for avi (figure 1 and 2).ipynb",
|
| 157 |
+
"sha256": "929764197b67e665bcb2f884db8ae1c2c37df34210f3074b7f09abb2a78bc243",
|
| 158 |
+
"language": "Jupyter",
|
| 159 |
+
"lines": 281,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 3946
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "per_odor_comparison (figure 1).ipynb",
|
| 166 |
+
"sha256": "d34706eec1437f6d2810b46a88b25a83a5de0110679febab86d56746fa7b5116",
|
| 167 |
+
"language": "Jupyter",
|
| 168 |
+
"lines": 456,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 4038
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "videodataToAVI.m",
|
| 175 |
+
"sha256": "f1ecba44eb9121b74b9727fa5ced3ced13eda64239a1d3de417324529fe0d420",
|
| 176 |
+
"language": "MATLAB",
|
| 177 |
+
"lines": 74,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 6076
|
| 181 |
+
}
|
| 182 |
+
]
|
| 183 |
+
}
|
manifests/1d/github.com__sankaranlab__scavenge.json
ADDED
|
@@ -0,0 +1,174 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/sankaranlab/scavenge",
|
| 4 |
+
"url": "https://github.com/sankaranlab/SCAVENGE",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "8ee8b173d965009a696b2a590d5b17b28b7cf851",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 674,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2235
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "R/SCAVENGE_color.R",
|
| 22 |
+
"sha256": "41c107fdb6fdff404295f14e1091fc210aa5288d203efc4ef31cb06cef82f685",
|
| 23 |
+
"language": "R",
|
| 24 |
+
"lines": 58,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 14836
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "R/cal_scalefactor.R",
|
| 31 |
+
"sha256": "d73cad485bd205fc698cf6cca1573e9e5da6829dc4e487c1b6a713ed6a777aa4",
|
| 32 |
+
"language": "R",
|
| 33 |
+
"lines": 28,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 14698
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "R/capOutlierQuantile.R",
|
| 40 |
+
"sha256": "ac360675752233be4d5a33561f2b5440af0258aa3016984f9ae517f7986cd6e6",
|
| 41 |
+
"language": "R",
|
| 42 |
+
"lines": 18,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 14683
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "R/data.R",
|
| 49 |
+
"sha256": "85de7c7624991bb02c9da2648f73b920a68f02825cb01f6f013b6cfe3814a31f",
|
| 50 |
+
"language": "R",
|
| 51 |
+
"lines": 47,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 14761
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "R/do_lsi.R",
|
| 58 |
+
"sha256": "ef81bf4a896ef10f5b89928a0b060266b2aa908e9b0af058603483987b6d187c",
|
| 59 |
+
"language": "R",
|
| 60 |
+
"lines": 27,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 14701
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "R/example_data.R",
|
| 67 |
+
"sha256": "a22336a59591bf41666634a23a05a3d34e487f8dd638bfc9f9fa589d5bdbe361",
|
| 68 |
+
"language": "R",
|
| 69 |
+
"lines": 47,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 14733
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "R/get_sigcell_simple.R",
|
| 76 |
+
"sha256": "2a70d4b85c62745e6fac14b31ee4b04d0f8c7c98eb39c04199d02c39dc06237f",
|
| 77 |
+
"language": "R",
|
| 78 |
+
"lines": 108,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 14922
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "R/getmutualknn.R",
|
| 85 |
+
"sha256": "52a0f63f06964898dbce0333313a5d15a98c31fdf82f31cabbcb510f50caac56",
|
| 86 |
+
"language": "R",
|
| 87 |
+
"lines": 63,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 14756
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "R/load_rdata.R",
|
| 94 |
+
"sha256": "224c779d85fbdddb8cf11d19fba919d3fe279482cdccf25d281b28ce9819d8c5",
|
| 95 |
+
"language": "R",
|
| 96 |
+
"lines": 19,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 14682
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "R/max_min_scale.R",
|
| 103 |
+
"sha256": "1dce86a6f54c2b970cd88c055564a7fb9e2878d288640f02a7ce387e0e4d544e",
|
| 104 |
+
"language": "R",
|
| 105 |
+
"lines": 17,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 14674
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "R/randomWalk_sparse.R",
|
| 112 |
+
"sha256": "6681f19e1685acb4dca91d5fb682513b70a572c29f80560498901b2d65219975",
|
| 113 |
+
"language": "R",
|
| 114 |
+
"lines": 74,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 14787
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "R/seedindx.R",
|
| 121 |
+
"sha256": "c8f39aae65502f01f9f62b2f88feb107232f33c65d55d97a71f47b84aa699d64",
|
| 122 |
+
"language": "R",
|
| 123 |
+
"lines": 40,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 14722
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "R/tfidf.R",
|
| 130 |
+
"sha256": "6fad7ea462f5ad97eb56c53ece1eb0084ba4ab1701ef2d080c71743aa9bc92e0",
|
| 131 |
+
"language": "R",
|
| 132 |
+
"lines": 71,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 14763
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "README.Rmd",
|
| 139 |
+
"sha256": "70ac9f6f4c5003fd5d24d40070bb86043756308081208c055221e78ce1307d0e",
|
| 140 |
+
"language": "R",
|
| 141 |
+
"lines": 76,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 14891
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "README.md",
|
| 148 |
+
"sha256": "8f6d28164ee34ece84233361471c3d8575d570920e1a76ad3eef1beadab8f107",
|
| 149 |
+
"language": "Text",
|
| 150 |
+
"lines": 117,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 16138
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "vignettes/SCAVENGE.Rmd",
|
| 157 |
+
"sha256": "b2a706d7262a6d98a0114512d4cea8a3dc3b90460f16a33266092286d9db8a66",
|
| 158 |
+
"language": "R",
|
| 159 |
+
"lines": 239,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 15025
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "vignettes/docker.Rmd",
|
| 166 |
+
"sha256": "1bed335a7fe8f053112edb43ec6d35be48ac15872f54814e61891d6875d0e104",
|
| 167 |
+
"language": "R",
|
| 168 |
+
"lines": 101,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 14796
|
| 172 |
+
}
|
| 173 |
+
]
|
| 174 |
+
}
|
manifests/1d/github.com__zhangzehao626__pansci.json
ADDED
|
@@ -0,0 +1,57 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/zhangzehao626/pansci",
|
| 4 |
+
"url": "https://github.com/zhangzehao626/PanSci",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "ca03caf0d871945bbf917a1afb764196a48e9d8c",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "c9f24dc7b41516cdbbb4e7bce4b9f852116e215008ae7b90a0cfc28342927aa5",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 21,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4204
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "a5b498ba57c08f8559621981ccdde30901ea29541d744f59a41c0633164997ac",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 71,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16126
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "analysis_scripts/PanSci_differential_abundance_analysis.ipynb",
|
| 31 |
+
"sha256": "b59ae87857fdbba64cbe11fa87be44d1c7d7f6c3901d4df532253d5e5c8f5416",
|
| 32 |
+
"language": "Jupyter",
|
| 33 |
+
"lines": 129,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 3922
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "analysis_scripts/PanSci_differential_gene_expression_analysis.R",
|
| 40 |
+
"sha256": "37eed03c9b4d7bc4f539760a3f95ff40bbe64b158abf86d03d378751d07dd620",
|
| 41 |
+
"language": "R",
|
| 42 |
+
"lines": 105,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 14900
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "plotting_scripts/PanSci_plotting_tutorial.ipynb",
|
| 49 |
+
"sha256": "156d3d90727e9b4f8b8335b1ce16fdced0e40e1437bc73f6fc8c7e73016200b6",
|
| 50 |
+
"language": "Jupyter",
|
| 51 |
+
"lines": 873,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 4140
|
| 55 |
+
}
|
| 56 |
+
]
|
| 57 |
+
}
|
manifests/1f/github.com__memcolab__kang2025communbiol.json
ADDED
|
@@ -0,0 +1,39 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/memcolab/kang2025communbiol",
|
| 4 |
+
"url": "https://github.com/memcolab/Kang2025CommunBiol",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "91f6301da1b2f00ae883358e173c0d05810cc4ac",
|
| 7 |
+
"license": "BSD-3-Clause",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "Kang2025_custom_script.m",
|
| 13 |
+
"sha256": "da8aae0d1852463f0392a7a177485239a029fc49bb961993709683e7d3477932",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 190,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 7408
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "LICENSE",
|
| 22 |
+
"sha256": "663652fc8f329b7051fa0c56ca0e98838469048a7317ff0a7c4798a0cb0a2542",
|
| 23 |
+
"language": "License",
|
| 24 |
+
"lines": 28,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 4270
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "README.md",
|
| 31 |
+
"sha256": "72889edf94cbf91aafa0011fe264cf4b4413a6ff296d62dcefb30d5b72c3697f",
|
| 32 |
+
"language": "Text",
|
| 33 |
+
"lines": 4,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 15954
|
| 37 |
+
}
|
| 38 |
+
]
|
| 39 |
+
}
|
manifests/1f/zenodo__14166452.json
ADDED
|
@@ -0,0 +1,21 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:14166452",
|
| 4 |
+
"url": "https://doi.org/10.5281/zenodo.14166452",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "NM cleaning script.R",
|
| 13 |
+
"sha256": "2bf9639228dca17ad8c5dfef9c90e79d9cf73be34f9ee43f22b83d8614726696",
|
| 14 |
+
"language": "R",
|
| 15 |
+
"lines": 102,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 14931
|
| 19 |
+
}
|
| 20 |
+
]
|
| 21 |
+
}
|
manifests/21/github.com__jbonaiuto__cued_action_selection.json
ADDED
|
@@ -0,0 +1,165 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/jbonaiuto/cued_action_selection",
|
| 4 |
+
"url": "https://github.com/jbonaiuto/cued_action_selection",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "58ea009b36a03992609bf68bf493158972ac8102",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 674,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2235
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "QuestCreate.m",
|
| 22 |
+
"sha256": "49fa0ca01b94bd65899f8a9956023510cf588ae46a159a01ba12f37344271240",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 163,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 7533
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "QuestMean.m",
|
| 31 |
+
"sha256": "3a5535e6cc551a739eb5233c8de7cac47d1aabda6389ea89b89d001b04aa8579",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 24,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 4651
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "QuestQuantile.m",
|
| 40 |
+
"sha256": "fc1eaccbc2421831b45eef13bf76e6f77e21937c2d683c5744c57c1b584b0aed",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 53,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 5540
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "QuestRecompute.m",
|
| 49 |
+
"sha256": "6aa08dbe9bb45036f4fde8d518d1b99671f404e157cf19bb788096b141c0280b",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 166,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 7270
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "QuestSd.m",
|
| 58 |
+
"sha256": "8d5db048b5d07c384a4135afa164b21c9112ac268e6769fd519bbff26b226231",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 26,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 4680
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "QuestUpdate.m",
|
| 67 |
+
"sha256": "7f6834a2b6ec8c230bdb6076ae03d47c2fee01de04104e006f9c26cd630d1361",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 67,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 5969
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "README.md",
|
| 76 |
+
"sha256": "1ac03112c3e05fd2dae1938fa88742bec32bd902756f4ddf7e527c86ad5a932a",
|
| 77 |
+
"language": "Text",
|
| 78 |
+
"lines": 6,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 15955
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "VisAng_to_cm.m",
|
| 85 |
+
"sha256": "c708503f503b410c4d4aaec171b8252887b61b12d058022d919640ba08e2bf16",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 6,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 4381
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "cogent_setup.m",
|
| 94 |
+
"sha256": "7501e053eed5f086be6d4fb9d9672bc343cf941203ed5bd9f6f70375fa9adf94",
|
| 95 |
+
"language": "MATLAB",
|
| 96 |
+
"lines": 88,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 6389
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "draw_arrow.m",
|
| 103 |
+
"sha256": "09185f29428c59e8229283b66ef29d236a600d13300da1b313b00c19740700b1",
|
| 104 |
+
"language": "MATLAB",
|
| 105 |
+
"lines": 19,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 4618
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "draw_fix.m",
|
| 112 |
+
"sha256": "f52100c6d3866a585dd3d13e1913c8bf001667aab0307da9a4b7d94b8ad96755",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 3,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 4313
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "draw_stim.m",
|
| 121 |
+
"sha256": "6e86a750ed003a0077de055af86ff66941bea5efd56823ace5ae82c35e247f0f",
|
| 122 |
+
"language": "MATLAB",
|
| 123 |
+
"lines": 59,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 5824
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "estimate_threshold.m",
|
| 130 |
+
"sha256": "e5760ceaae20ff8fc83150a08ff2c64130c656ffc340646a16936304f7eab8ba",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 161,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 7075
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "generate_stimuli.m",
|
| 139 |
+
"sha256": "a796739dd1946e5dd53b7affe3d0d5ec0fafc2e26660066aa121d2c8da19ff36",
|
| 140 |
+
"language": "MATLAB",
|
| 141 |
+
"lines": 151,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 7058
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "main_exp.m",
|
| 148 |
+
"sha256": "1251841f42b8729e7c5c2d20d4c0ecb055252228cf2e8a7ca3735a7fdafe2e72",
|
| 149 |
+
"language": "MATLAB",
|
| 150 |
+
"lines": 237,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 7432
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "send_trigger.m",
|
| 157 |
+
"sha256": "7c4670a0142bd22c79e6ed1b62c7ab5e1b669a77a48dc23c46a3b270fdba1a07",
|
| 158 |
+
"language": "MATLAB",
|
| 159 |
+
"lines": 5,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 4312
|
| 163 |
+
}
|
| 164 |
+
]
|
| 165 |
+
}
|
manifests/21/zenodo__15005128.json
ADDED
|
@@ -0,0 +1,39 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:15005128",
|
| 4 |
+
"url": "10.5281/zenodo.15005128",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "plot_audiograms.m",
|
| 13 |
+
"sha256": "81d2c6245425cf875233f6ebc37538e8805ace2b61594b1aeccf3d7bfb8593d3",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 85,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 5452
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "plot_behavioural_data.m",
|
| 22 |
+
"sha256": "bd725c109460e71374a36f57cf7bf3305175bb9602883ff1050ad4b6f59a2f3a",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 171,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 6828
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "readme.txt",
|
| 31 |
+
"sha256": "44c5948f6e2cf0cfafb3d72a9e6e1a8b07e34fad19d93964605a345482ad1526",
|
| 32 |
+
"language": "Text",
|
| 33 |
+
"lines": 10,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 15963
|
| 37 |
+
}
|
| 38 |
+
]
|
| 39 |
+
}
|
manifests/23/github.com__farrowlab__reinhard_2019.json
ADDED
|
@@ -0,0 +1,660 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/farrowlab/reinhard_2019",
|
| 4 |
+
"url": "https://github.com/farrowlab/Reinhard_2019",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "9d7cadef8ecb346b734b3f5ecb782a4b3b024757",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "Ariadne2Nodes.m",
|
| 13 |
+
"sha256": "9b6fafdd687fe113afaa7e813cd50184977fe7d067efc696cd8fa6de690f206a",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 78,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 6039
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "AriadneNewMultiple2Sumbul.m",
|
| 22 |
+
"sha256": "ea7ab3faac27a2f790859b0cacefb5f5aa93411e31d04cd38b9e13e7705d9c88",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 281,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 7475
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "AriadneVisualResults.m",
|
| 31 |
+
"sha256": "e495874276480fa14ab5fa0b40f7b2f91c064f7639d961fc7fa9dc5724c9f158",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 74,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 5883
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "AriadneVisualResults_withNumbers.m",
|
| 40 |
+
"sha256": "cfa6f6decc7d4d977d96ff4783bfa6b796b0cf8b10bc4d374afc89391abf7f27",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 78,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 5881
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "CANDLEpackage_r01.02/CANDLE.m",
|
| 49 |
+
"sha256": "4b881f417b3b6c5a30ea0a60a515fbf06debd9bc6230caeab1bb1dd6f5125754",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 268,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 7628
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "CANDLEpackage_r01.02/CANDLE_viewer.m",
|
| 58 |
+
"sha256": "8ce9f032021f9c592cecbc66e9adcd7fee87000e5f849ffb4ff4778b3931962c",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 84,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 5876
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "CANDLEpackage_r01.02/function/OVST.m",
|
| 67 |
+
"sha256": "20b2def708e016acafcd03c521498e43679550833820849b765f316cfcf5df0d",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 31,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 5313
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "CANDLEpackage_r01.02/function/downsample.m",
|
| 76 |
+
"sha256": "bbf5e06241ce4552115095e756d144cca2c8131b1e2cdc1163422bd7a109d59b",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 32,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 5029
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "CANDLEpackage_r01.02/function/medfilt3.m",
|
| 85 |
+
"sha256": "1f8cc8e2884dbd20375efbb0ec08eefe94c136b37099dfdb9f9f07f14e210a39",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 217,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 6,
|
| 90 |
+
"row": 15971
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "CandleK.m",
|
| 94 |
+
"sha256": "f520e6396c69f0a5945474fc4daccdf14a3f5ad9f1a5d83dba2f0e8ef58fa87f",
|
| 95 |
+
"language": "MATLAB",
|
| 96 |
+
"lines": 196,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 7281
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "CheckChatBands.m",
|
| 103 |
+
"sha256": "c29a9459eda93492f6248f251690e7cc24652977b1a35bd92c90bf0542d38296",
|
| 104 |
+
"language": "MATLAB",
|
| 105 |
+
"lines": 42,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 5130
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "ConvertLSMSumbul_KR.m",
|
| 112 |
+
"sha256": "b8ec860cf118f7d1a8c038a4d6d07d38610696b98d230dd32a9876a62b7a1463",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 241,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 7446
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "LICENSE",
|
| 121 |
+
"sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
|
| 122 |
+
"language": "License",
|
| 123 |
+
"lines": 674,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 1,
|
| 126 |
+
"row": 2235
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "LSM2Sumbul.m",
|
| 130 |
+
"sha256": "c01e070a149ded15e5b2996a6b1dc15c9ed3903c8ba2431b8d9d443179bcba51",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 104,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 6336
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "RGC_Annotate.m",
|
| 139 |
+
"sha256": "a4f98ace2d3fafb735848577e5dc0277573fa49fad2a32b29a1d49b97aa9ec0d",
|
| 140 |
+
"language": "MATLAB",
|
| 141 |
+
"lines": 21,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 4605
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "RGC_CheckChatAnnotations.m",
|
| 148 |
+
"sha256": "05deb46be8ac5996d4031f9e763b80cde7f8ab87a0cf49a4dfb6639e411c68c3",
|
| 149 |
+
"language": "MATLAB",
|
| 150 |
+
"lines": 125,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 6785
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "RGC_CurrentlyWorkingOn.m",
|
| 157 |
+
"sha256": "202b68e2ffc74d20bffb8f66924c21230ab3d00bba614bbabd97174e548207a5",
|
| 158 |
+
"language": "MATLAB",
|
| 159 |
+
"lines": 63,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 5680
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "RGC_GUI.m",
|
| 166 |
+
"sha256": "c82a712a2efb3bf4c5cae528d7490913947775f2786278c85ca09c2efcfc17e8",
|
| 167 |
+
"language": "MATLAB",
|
| 168 |
+
"lines": 449,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 7921
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "RGC_InfoSelectedCells.m",
|
| 175 |
+
"sha256": "4b8fe0bd5843014393e388ac82796b4adf11f30f366963c6aa3a8a3a84fd16a0",
|
| 176 |
+
"language": "MATLAB",
|
| 177 |
+
"lines": 22,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 4548
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "RGC_LoadParse.m",
|
| 184 |
+
"sha256": "e90e49819e9481b5b682b90a9473c199422e7520b63db31263606db5d2cc4635",
|
| 185 |
+
"language": "MATLAB",
|
| 186 |
+
"lines": 26,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 4830
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "RGC_MAIN.m",
|
| 193 |
+
"sha256": "6898611caad51d0dc62ac095738a2a1de610bacf935538ffcb04f512383aad9b",
|
| 194 |
+
"language": "MATLAB",
|
| 195 |
+
"lines": 82,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 6578
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "RGC_Parameters.m",
|
| 202 |
+
"sha256": "0f6d896375799bb73d6ba1ded46404749f1b2ae7023186acea6bda79349b8c9c",
|
| 203 |
+
"language": "MATLAB",
|
| 204 |
+
"lines": 361,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 7886
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "RGC_SomaArea.m",
|
| 211 |
+
"sha256": "4357238f05f538b06d9a88d34f1252a82206fa0d9a085c38c9f20ed03c00dbae",
|
| 212 |
+
"language": "MATLAB",
|
| 213 |
+
"lines": 366,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 7944
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "RGC_Thresholding.m",
|
| 220 |
+
"sha256": "b4f40191c6cc04f58c6fcc499777bf1eaf1da53abd005dfab5b244d21b432d06",
|
| 221 |
+
"language": "MATLAB",
|
| 222 |
+
"lines": 83,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 6188
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "RGC_Warping.m",
|
| 229 |
+
"sha256": "3b7356d104d53af62e46ef99b344fefa5af84cc97a5803980e1c6dc1bb2c6492",
|
| 230 |
+
"language": "MATLAB",
|
| 231 |
+
"lines": 43,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 5310
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "RGC_WeirdCells.m",
|
| 238 |
+
"sha256": "d30ef36e83f347588e55a9863ad21ee7c99819df0282bd2a4887b5e8d7b606b0",
|
| 239 |
+
"language": "MATLAB",
|
| 240 |
+
"lines": 48,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 5162
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "RGC_changeUsable.m",
|
| 247 |
+
"sha256": "d7bf98fec923ebde0ab754e39a2dcec14b203e9d8d9b2cdcc0d2e86897865522",
|
| 248 |
+
"language": "MATLAB",
|
| 249 |
+
"lines": 8,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 4353
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "RGC_checkZDist.m",
|
| 256 |
+
"sha256": "7f666058509ce580881a2108d18ff7014928ad9e80bbef6c205bb85a2afade32",
|
| 257 |
+
"language": "MATLAB",
|
| 258 |
+
"lines": 89,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 6334
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "RGC_downSampleVoxels.m",
|
| 265 |
+
"sha256": "bfdbe8bf9a8210bc18ae45798d2c8cff346a9254369a06772832249200c8e12b",
|
| 266 |
+
"language": "MATLAB",
|
| 267 |
+
"lines": 54,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 5171
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "RGC_masterscript.m",
|
| 274 |
+
"sha256": "639701fa8cef17c0f8b30ea79dd7ca60377424e810ec3a1a26fead5d518ea289",
|
| 275 |
+
"language": "MATLAB",
|
| 276 |
+
"lines": 829,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 19,
|
| 279 |
+
"row": 8258
|
| 280 |
+
},
|
| 281 |
+
{
|
| 282 |
+
"path": "RGC_masterscript_20191002.m",
|
| 283 |
+
"sha256": "200be79c0832b00cfa08349a4306fe72daf00e895096db6f1312e885245008d8",
|
| 284 |
+
"language": "MATLAB",
|
| 285 |
+
"lines": 738,
|
| 286 |
+
"truncated": false,
|
| 287 |
+
"block": 19,
|
| 288 |
+
"row": 8219
|
| 289 |
+
},
|
| 290 |
+
{
|
| 291 |
+
"path": "RGC_masterscript_backup.m",
|
| 292 |
+
"sha256": "200be79c0832b00cfa08349a4306fe72daf00e895096db6f1312e885245008d8",
|
| 293 |
+
"language": "MATLAB",
|
| 294 |
+
"lines": 738,
|
| 295 |
+
"truncated": false,
|
| 296 |
+
"block": 19,
|
| 297 |
+
"row": 8219
|
| 298 |
+
},
|
| 299 |
+
{
|
| 300 |
+
"path": "RGC_missingCoord.m",
|
| 301 |
+
"sha256": "450dfdbce095eee5b32a65f80b089266cbc02d9681f75858f86e18b17752e4a2",
|
| 302 |
+
"language": "MATLAB",
|
| 303 |
+
"lines": 62,
|
| 304 |
+
"truncated": false,
|
| 305 |
+
"block": 19,
|
| 306 |
+
"row": 5519
|
| 307 |
+
},
|
| 308 |
+
{
|
| 309 |
+
"path": "RGC_skeletonRGC.m",
|
| 310 |
+
"sha256": "63428c38f92141c71f82ef49cc99dd216b8b6bdf7285c968a0012f9236120fbf",
|
| 311 |
+
"language": "MATLAB",
|
| 312 |
+
"lines": 114,
|
| 313 |
+
"truncated": false,
|
| 314 |
+
"block": 19,
|
| 315 |
+
"row": 6698
|
| 316 |
+
},
|
| 317 |
+
{
|
| 318 |
+
"path": "cellareas.m",
|
| 319 |
+
"sha256": "9d13d906690c89b4b3d0784cda027db20e624ebc9cdae408108e18d9549077b1",
|
| 320 |
+
"language": "MATLAB",
|
| 321 |
+
"lines": 69,
|
| 322 |
+
"truncated": false,
|
| 323 |
+
"block": 19,
|
| 324 |
+
"row": 5836
|
| 325 |
+
},
|
| 326 |
+
{
|
| 327 |
+
"path": "cmocean/cmocean.m",
|
| 328 |
+
"sha256": "22f00f3d1009ccb6bd2061aa04378a60dae310a887995eb9500473a2edaec24e",
|
| 329 |
+
"language": "MATLAB",
|
| 330 |
+
"lines": 2828,
|
| 331 |
+
"truncated": true,
|
| 332 |
+
"block": 19,
|
| 333 |
+
"row": 8414
|
| 334 |
+
},
|
| 335 |
+
{
|
| 336 |
+
"path": "cmocean/cmocean_documentation.m",
|
| 337 |
+
"sha256": "ab852e00baadf5b514a21e25ded4d1d0a284cd500db2414d5b9b7b04b5cffa86",
|
| 338 |
+
"language": "MATLAB",
|
| 339 |
+
"lines": 127,
|
| 340 |
+
"truncated": false,
|
| 341 |
+
"block": 19,
|
| 342 |
+
"row": 6805
|
| 343 |
+
},
|
| 344 |
+
{
|
| 345 |
+
"path": "getstack.m",
|
| 346 |
+
"sha256": "2b08a15931a79414953b39ea38c45d8d27e3c425157eb6fab39de5071a329985",
|
| 347 |
+
"language": "MATLAB",
|
| 348 |
+
"lines": 67,
|
| 349 |
+
"truncated": false,
|
| 350 |
+
"block": 19,
|
| 351 |
+
"row": 6018
|
| 352 |
+
},
|
| 353 |
+
{
|
| 354 |
+
"path": "lsm/cstruct/contents.m",
|
| 355 |
+
"sha256": "2fca1d0d8e108c868d41d6a9836b609583f3677171b0a8af0e970f2f96203360",
|
| 356 |
+
"language": "MATLAB",
|
| 357 |
+
"lines": 15,
|
| 358 |
+
"truncated": false,
|
| 359 |
+
"block": 19,
|
| 360 |
+
"row": 4704
|
| 361 |
+
},
|
| 362 |
+
{
|
| 363 |
+
"path": "lsm/cstruct/structappend.m",
|
| 364 |
+
"sha256": "5b80605f68b85825a23542b9c78535d6efe6a2b125d5e056963cbd768639189e",
|
| 365 |
+
"language": "MATLAB",
|
| 366 |
+
"lines": 23,
|
| 367 |
+
"truncated": false,
|
| 368 |
+
"block": 19,
|
| 369 |
+
"row": 4876
|
| 370 |
+
},
|
| 371 |
+
{
|
| 372 |
+
"path": "lsm/cstruct/structcombine.m",
|
| 373 |
+
"sha256": "4fb64d8c203562196710c776bff78109669e309d44333e140f51411d339c20f0",
|
| 374 |
+
"language": "MATLAB",
|
| 375 |
+
"lines": 50,
|
| 376 |
+
"truncated": false,
|
| 377 |
+
"block": 19,
|
| 378 |
+
"row": 5594
|
| 379 |
+
},
|
| 380 |
+
{
|
| 381 |
+
"path": "lsm/cstruct/structmap.m",
|
| 382 |
+
"sha256": "055ed85673ab1c5700264a9d253d3ba40d44e5fcc9ea1704c73e983bb682c713",
|
| 383 |
+
"language": "MATLAB",
|
| 384 |
+
"lines": 27,
|
| 385 |
+
"truncated": false,
|
| 386 |
+
"block": 19,
|
| 387 |
+
"row": 5003
|
| 388 |
+
},
|
| 389 |
+
{
|
| 390 |
+
"path": "lsm/cstruct/structread.m",
|
| 391 |
+
"sha256": "0cece4ed13d043bdd810bf98afdf558665ed3b4b52470583c18c3ff48b0247da",
|
| 392 |
+
"language": "MATLAB",
|
| 393 |
+
"lines": 83,
|
| 394 |
+
"truncated": false,
|
| 395 |
+
"block": 19,
|
| 396 |
+
"row": 6251
|
| 397 |
+
},
|
| 398 |
+
{
|
| 399 |
+
"path": "lsm/cstruct/structsizeof.m",
|
| 400 |
+
"sha256": "c54f350098d90d2b4ebd958724583921034fb98ad06a7a8743d47b24d19ebf6b",
|
| 401 |
+
"language": "MATLAB",
|
| 402 |
+
"lines": 41,
|
| 403 |
+
"truncated": false,
|
| 404 |
+
"block": 19,
|
| 405 |
+
"row": 5275
|
| 406 |
+
},
|
| 407 |
+
{
|
| 408 |
+
"path": "lsm/lsm/LSM_H.m",
|
| 409 |
+
"sha256": "4c7ba4e9052287c1a792775daef0441ee39d30c629ea714c53b376cafbba246c",
|
| 410 |
+
"language": "MATLAB",
|
| 411 |
+
"lines": 298,
|
| 412 |
+
"truncated": false,
|
| 413 |
+
"block": 19,
|
| 414 |
+
"row": 7813
|
| 415 |
+
},
|
| 416 |
+
{
|
| 417 |
+
"path": "lsm/lsm/TIFF_H.m",
|
| 418 |
+
"sha256": "a5355d45351cd9bbfe828da6ef985e32de58df0138ca6fe2d0a19986bf3ebe0c",
|
| 419 |
+
"language": "MATLAB",
|
| 420 |
+
"lines": 33,
|
| 421 |
+
"truncated": false,
|
| 422 |
+
"block": 19,
|
| 423 |
+
"row": 5196
|
| 424 |
+
},
|
| 425 |
+
{
|
| 426 |
+
"path": "lsm/lsm/channelinforead.m",
|
| 427 |
+
"sha256": "66ef9b9e584efee4a00d00a997afe1eb8f38a7b4fcc9b363c701d481a2229f3b",
|
| 428 |
+
"language": "MATLAB",
|
| 429 |
+
"lines": 48,
|
| 430 |
+
"truncated": false,
|
| 431 |
+
"block": 19,
|
| 432 |
+
"row": 5515
|
| 433 |
+
},
|
| 434 |
+
{
|
| 435 |
+
"path": "lsm/lsm/contents.m",
|
| 436 |
+
"sha256": "dc17613af5a148a95f95e1ac9238c92c77ec0c011560963c7110157171def594",
|
| 437 |
+
"language": "MATLAB",
|
| 438 |
+
"lines": 19,
|
| 439 |
+
"truncated": false,
|
| 440 |
+
"block": 19,
|
| 441 |
+
"row": 4762
|
| 442 |
+
},
|
| 443 |
+
{
|
| 444 |
+
"path": "lsm/lsm/ifdread.m",
|
| 445 |
+
"sha256": "38d8b62fa670411f1a9f1a0703171efb11b64c257cf90b68b82f973c214cefd2",
|
| 446 |
+
"language": "MATLAB",
|
| 447 |
+
"lines": 87,
|
| 448 |
+
"truncated": false,
|
| 449 |
+
"block": 19,
|
| 450 |
+
"row": 6681
|
| 451 |
+
},
|
| 452 |
+
{
|
| 453 |
+
"path": "lsm/lsm/lsminfo.m",
|
| 454 |
+
"sha256": "5185aa7b4b3fd1e506cd6af0567544f0a50341ca5bb0b918301965f50c7ec719",
|
| 455 |
+
"language": "MATLAB",
|
| 456 |
+
"lines": 115,
|
| 457 |
+
"truncated": false,
|
| 458 |
+
"block": 19,
|
| 459 |
+
"row": 7022
|
| 460 |
+
},
|
| 461 |
+
{
|
| 462 |
+
"path": "lsm/lsm/scaninforead.m",
|
| 463 |
+
"sha256": "bd0416c63cf16fe740fd79b2416155850a67fb296b9f123c56cd9a489c6d79f7",
|
| 464 |
+
"language": "MATLAB",
|
| 465 |
+
"lines": 71,
|
| 466 |
+
"truncated": false,
|
| 467 |
+
"block": 19,
|
| 468 |
+
"row": 6013
|
| 469 |
+
},
|
| 470 |
+
{
|
| 471 |
+
"path": "lsm/lsm/timestampsread.m",
|
| 472 |
+
"sha256": "41635ccbf8e03f5c5b66515178af7850bb0f90d0d8ddeb689df639886f0ee4f7",
|
| 473 |
+
"language": "MATLAB",
|
| 474 |
+
"lines": 32,
|
| 475 |
+
"truncated": false,
|
| 476 |
+
"block": 19,
|
| 477 |
+
"row": 5158
|
| 478 |
+
},
|
| 479 |
+
{
|
| 480 |
+
"path": "lsm2bin.m",
|
| 481 |
+
"sha256": "f81b5252ece54ae6116fd1cb7717a4b3f01c57cad89a9414731aa5f1bafc8941",
|
| 482 |
+
"language": "MATLAB",
|
| 483 |
+
"lines": 89,
|
| 484 |
+
"truncated": false,
|
| 485 |
+
"block": 19,
|
| 486 |
+
"row": 6182
|
| 487 |
+
},
|
| 488 |
+
{
|
| 489 |
+
"path": "master.m",
|
| 490 |
+
"sha256": "1511276c5ed59c31e359b80c9490266b1a0dfaa76f60ad37b6b5e1545fc72159",
|
| 491 |
+
"language": "MATLAB",
|
| 492 |
+
"lines": 158,
|
| 493 |
+
"truncated": false,
|
| 494 |
+
"block": 19,
|
| 495 |
+
"row": 7051
|
| 496 |
+
},
|
| 497 |
+
{
|
| 498 |
+
"path": "masterscript.m",
|
| 499 |
+
"sha256": "4ca14f707399fbb33e8001163da6003b9306c55602a1cc9201e1ee81d9924ebb",
|
| 500 |
+
"language": "MATLAB",
|
| 501 |
+
"lines": 913,
|
| 502 |
+
"truncated": false,
|
| 503 |
+
"block": 19,
|
| 504 |
+
"row": 8242
|
| 505 |
+
},
|
| 506 |
+
{
|
| 507 |
+
"path": "movingstd2.m",
|
| 508 |
+
"sha256": "c632f03cdf1426cfefabb23c9559b99a96df10a58bd66407598a5d4dcb02aac7",
|
| 509 |
+
"language": "MATLAB",
|
| 510 |
+
"lines": 107,
|
| 511 |
+
"truncated": false,
|
| 512 |
+
"block": 19,
|
| 513 |
+
"row": 6588
|
| 514 |
+
},
|
| 515 |
+
{
|
| 516 |
+
"path": "rgcAnalyzer_modified.m",
|
| 517 |
+
"sha256": "51082cd51596388f6e6476851e05a5c498938c149f8a105ac1a90c1e4df4a2a7",
|
| 518 |
+
"language": "MATLAB",
|
| 519 |
+
"lines": 2014,
|
| 520 |
+
"truncated": false,
|
| 521 |
+
"block": 19,
|
| 522 |
+
"row": 8392
|
| 523 |
+
},
|
| 524 |
+
{
|
| 525 |
+
"path": "rgc_annotation.m",
|
| 526 |
+
"sha256": "3e02c5d2ca8c6aba21392a49a0edb725c37a12918e39a8a6a07e2fb48e5d40cb",
|
| 527 |
+
"language": "MATLAB",
|
| 528 |
+
"lines": 186,
|
| 529 |
+
"truncated": false,
|
| 530 |
+
"block": 19,
|
| 531 |
+
"row": 7323
|
| 532 |
+
},
|
| 533 |
+
{
|
| 534 |
+
"path": "saveastiff.m",
|
| 535 |
+
"sha256": "70c3e53c6f085f8526cb4ca0d6bb56d0e10599d6f5981fa4643867e37dd43b28",
|
| 536 |
+
"language": "MATLAB",
|
| 537 |
+
"lines": 304,
|
| 538 |
+
"truncated": false,
|
| 539 |
+
"block": 3,
|
| 540 |
+
"row": 16426
|
| 541 |
+
},
|
| 542 |
+
{
|
| 543 |
+
"path": "test.m",
|
| 544 |
+
"sha256": "1a21338da3c5ce634268a1455191908ee16c9b1b694aed1e0c8718bccfa3e164",
|
| 545 |
+
"language": "MATLAB",
|
| 546 |
+
"lines": 73,
|
| 547 |
+
"truncated": false,
|
| 548 |
+
"block": 19,
|
| 549 |
+
"row": 6155
|
| 550 |
+
},
|
| 551 |
+
{
|
| 552 |
+
"path": "tiffread.m",
|
| 553 |
+
"sha256": "e0fcc9cad83aebcbef98b143251f9fdd30da2d64ef0380761bb32e385b38f0c0",
|
| 554 |
+
"language": "MATLAB",
|
| 555 |
+
"lines": 939,
|
| 556 |
+
"truncated": false,
|
| 557 |
+
"block": 19,
|
| 558 |
+
"row": 8270
|
| 559 |
+
},
|
| 560 |
+
{
|
| 561 |
+
"path": "volumetricRGC-master/findSoma.m",
|
| 562 |
+
"sha256": "6e16838d3314b0f18af0201714fe2cf5fdda6fd3493b32b6838b60a278badd78",
|
| 563 |
+
"language": "MATLAB",
|
| 564 |
+
"lines": 20,
|
| 565 |
+
"truncated": false,
|
| 566 |
+
"block": 19,
|
| 567 |
+
"row": 5279
|
| 568 |
+
},
|
| 569 |
+
{
|
| 570 |
+
"path": "volumetricRGC-master/gridder1d.m",
|
| 571 |
+
"sha256": "3101463ae26ff0a9e113b79af816fc0cd71424891e4737889dd1483b4bee50b0",
|
| 572 |
+
"language": "MATLAB",
|
| 573 |
+
"lines": 60,
|
| 574 |
+
"truncated": false,
|
| 575 |
+
"block": 19,
|
| 576 |
+
"row": 6160
|
| 577 |
+
},
|
| 578 |
+
{
|
| 579 |
+
"path": "volumetricRGC-master/myfft3K.m",
|
| 580 |
+
"sha256": "8319bd052a4d25bba6e4cf54569a2ba61390a2845ecf614dec9bde52e469478f",
|
| 581 |
+
"language": "MATLAB",
|
| 582 |
+
"lines": 11,
|
| 583 |
+
"truncated": false,
|
| 584 |
+
"block": 19,
|
| 585 |
+
"row": 4590
|
| 586 |
+
},
|
| 587 |
+
{
|
| 588 |
+
"path": "volumetricRGC-master/myifftK.m",
|
| 589 |
+
"sha256": "ec8b9b2ecc3a79a6b5a3c9eafa05a632d2ecb1d865d7ebb7682adfe6268a5961",
|
| 590 |
+
"language": "MATLAB",
|
| 591 |
+
"lines": 10,
|
| 592 |
+
"truncated": false,
|
| 593 |
+
"block": 19,
|
| 594 |
+
"row": 4474
|
| 595 |
+
},
|
| 596 |
+
{
|
| 597 |
+
"path": "volumetricRGC-master/postProcess.m",
|
| 598 |
+
"sha256": "0660b30911ae5a2ed785ec35c97e4c8ebac25b0106f08c1a65f20586839276a0",
|
| 599 |
+
"language": "MATLAB",
|
| 600 |
+
"lines": 40,
|
| 601 |
+
"truncated": false,
|
| 602 |
+
"block": 19,
|
| 603 |
+
"row": 6072
|
| 604 |
+
},
|
| 605 |
+
{
|
| 606 |
+
"path": "volumetricRGC-master/pureGridder1dK.m",
|
| 607 |
+
"sha256": "988dad64f6fc88e0984004806fc4b273e1006eb6371ce806f25e6822d3693125",
|
| 608 |
+
"language": "MATLAB",
|
| 609 |
+
"lines": 43,
|
| 610 |
+
"truncated": false,
|
| 611 |
+
"block": 19,
|
| 612 |
+
"row": 5578
|
| 613 |
+
},
|
| 614 |
+
{
|
| 615 |
+
"path": "volumetricRGC-master/removeSoma.m",
|
| 616 |
+
"sha256": "2e32f8e280df9984f0a02c6e45d2c9b551b96dbf59f58b7dd0f518596734c1d6",
|
| 617 |
+
"language": "MATLAB",
|
| 618 |
+
"lines": 30,
|
| 619 |
+
"truncated": false,
|
| 620 |
+
"block": 19,
|
| 621 |
+
"row": 5621
|
| 622 |
+
},
|
| 623 |
+
{
|
| 624 |
+
"path": "volumetricRGC-master/removeSoma_K.m",
|
| 625 |
+
"sha256": "9c9bcd7f05171fea6c8eab03687ad1d401e80ffe134d4dfa599d7884bb8d5e29",
|
| 626 |
+
"language": "MATLAB",
|
| 627 |
+
"lines": 18,
|
| 628 |
+
"truncated": false,
|
| 629 |
+
"block": 19,
|
| 630 |
+
"row": 4881
|
| 631 |
+
},
|
| 632 |
+
{
|
| 633 |
+
"path": "volumetricRGC-master/topologyPreservingVolumeGrower.m",
|
| 634 |
+
"sha256": "01d869feaab21a1fb8f5c4acbdd972cc518f5e1fc9d685b433aa9e3fab259b05",
|
| 635 |
+
"language": "MATLAB",
|
| 636 |
+
"lines": 149,
|
| 637 |
+
"truncated": false,
|
| 638 |
+
"block": 19,
|
| 639 |
+
"row": 7181
|
| 640 |
+
},
|
| 641 |
+
{
|
| 642 |
+
"path": "volumetricRGC-master/untitled3.m",
|
| 643 |
+
"sha256": "6df8c9e05e7d7ec8eb8081c0b8f05a959c06547992e8c153207b04a2cbf2f79a",
|
| 644 |
+
"language": "MATLAB",
|
| 645 |
+
"lines": 356,
|
| 646 |
+
"truncated": false,
|
| 647 |
+
"block": 19,
|
| 648 |
+
"row": 7853
|
| 649 |
+
},
|
| 650 |
+
{
|
| 651 |
+
"path": "volumetricRGC-master/warpVolume.m",
|
| 652 |
+
"sha256": "72cbf20e00930584d66c42cd8b461b5a89854eb5ac3b79b4e4bba91cc5c9de73",
|
| 653 |
+
"language": "MATLAB",
|
| 654 |
+
"lines": 1478,
|
| 655 |
+
"truncated": false,
|
| 656 |
+
"block": 19,
|
| 657 |
+
"row": 8364
|
| 658 |
+
}
|
| 659 |
+
]
|
| 660 |
+
}
|
manifests/24/github.com__yliu38__egnf.json
ADDED
|
@@ -0,0 +1,183 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/yliu38/egnf",
|
| 4 |
+
"url": "https://github.com/yliu38/EGNF",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "1f8f05496ae71a4463fa22faa3edfe9fe3987f5d",
|
| 7 |
+
"license": "Apache-2.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "c71d239df91726fc519c6eb72d318ec65820627232b2f796219e87dcf35d0ab4",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 201,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2216
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "Python/GAT_32genes_unpaired.py",
|
| 22 |
+
"sha256": "318e5e29636a8da3431b471ac7bda1cbcc8f3da353031ed41861b52f7e758001",
|
| 23 |
+
"language": "Python",
|
| 24 |
+
"lines": 322,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 13726
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "Python/GATv2_32genes_unpaired.py",
|
| 31 |
+
"sha256": "f42271e52aa271f9e4befd77483775d2ab673751a2078525ca9c4e61b7be076c",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 300,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 13725
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "Python/GCN_32genes_only_unpaired.py",
|
| 40 |
+
"sha256": "24e37891a4c360204664b2ee21e574e712c2d22d7e227ac7718d4c796ceb0986",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 316,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 13562
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "Python/GCN_32genes_unpaired.py",
|
| 49 |
+
"sha256": "5219583015527a767e1aba97ada51ac5a96058550872ca9b05f8a6d7e8887681",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 224,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 13285
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "Python/create_filenodes.py",
|
| 58 |
+
"sha256": "f6148526a2d74ed67d214c46d141737f7d7f2ec32fc2cd1a26f5a633a01c5db6",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 29,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 9082
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "Python/create_nodes.py",
|
| 67 |
+
"sha256": "3a1c993f20621cbffb8cc44b8d87995fd39f95db2a4a900bb0ede57d89421b8e",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 45,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 9505
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "Python/create_relationships.py",
|
| 76 |
+
"sha256": "470220f0e0c84b5c0bd87a7478dcdf7e304f0ec1f45e8dc65bd7044c79eaf28b",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 93,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 9849
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "Python/create_relationships_GNN.py",
|
| 85 |
+
"sha256": "78f9071dc1498ceede1ac230b1cf33636b0eae80feb52d3d7f4fe7ac68685802",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 104,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 10003
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "Python/download.network.py",
|
| 94 |
+
"sha256": "b6c1c81b67c8cda23421e6cd5fac19d05be9b109bd1e07ea0a2852cdc892cbd5",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 46,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 9699
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "Python/output_id_table.py",
|
| 103 |
+
"sha256": "2303f916ca545183437a73d8f44b1cf3968861d9e9f4d86dc05780827c78fd91",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 27,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 9212
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "Python/project_graph_sampling_class1.py",
|
| 112 |
+
"sha256": "c6dab9cfd25c7073633cfc67a40ce9f6b16d80806f82c68af779181207d4ec56",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 131,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 11660
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "Python/project_graph_sampling_class2.py",
|
| 121 |
+
"sha256": "d1e7f987d2629947d289232c378568e606de2f22a56cd4da48d49c3779c96a8c",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 131,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 11661
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "R/functions.R",
|
| 130 |
+
"sha256": "c0409f49db15cd5e63d489f0335fb18b466cfc374d1265a41e9ff4ce1d3aead7",
|
| 131 |
+
"language": "R",
|
| 132 |
+
"lines": 178,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 14943
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "R/pathway_enrich_class1.R",
|
| 139 |
+
"sha256": "bfa996939615dd2e1aa1bcf5a3a04d63b64750051a47d48555bd0984e9d0b4c9",
|
| 140 |
+
"language": "R",
|
| 141 |
+
"lines": 96,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 14834
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "R/pathway_enrich_class1_re.R",
|
| 148 |
+
"sha256": "d9c1ffa184d75ac2b01db6e2f7530ff47b81909da4a629a06fc309a999be7e65",
|
| 149 |
+
"language": "R",
|
| 150 |
+
"lines": 106,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 14843
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "R/pathway_enrich_class2.R",
|
| 157 |
+
"sha256": "285a399a659d99602de9bab715b4d2918c06a26e98e13fc0f260d3971bae8bad",
|
| 158 |
+
"language": "R",
|
| 159 |
+
"lines": 96,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 14833
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "R/pathway_enrich_class2_re.R",
|
| 166 |
+
"sha256": "52d7ec9f6f6e05c4a213b2b5adafac74c99ee6092d2f16842ff55aec6f6fe967",
|
| 167 |
+
"language": "R",
|
| 168 |
+
"lines": 106,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 14842
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "README.md",
|
| 175 |
+
"sha256": "7affa5cd6130287365507cd7551e93d80668978e03b9bd928faab55fad4024fe",
|
| 176 |
+
"language": "Text",
|
| 177 |
+
"lines": 410,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 16193
|
| 181 |
+
}
|
| 182 |
+
]
|
| 183 |
+
}
|
manifests/24/zenodo__14219743.json
ADDED
|
@@ -0,0 +1,21 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:14219743",
|
| 4 |
+
"url": "https://zenodo.org/records/14219743",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "README.md",
|
| 13 |
+
"sha256": "d8d3843e52d79741b549ac7c4e5bef3b0684a8975f84571ed2fc833294aad821",
|
| 14 |
+
"language": "Text",
|
| 15 |
+
"lines": 11,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 15988
|
| 19 |
+
}
|
| 20 |
+
]
|
| 21 |
+
}
|
manifests/24/zenodo__16218569.json
ADDED
|
@@ -0,0 +1,174 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:16218569",
|
| 4 |
+
"url": "10.5281/zenodo.16218569",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "GetFearPerSPMBeta.m",
|
| 13 |
+
"sha256": "8cd8c586ac5dc27b8375662c2d13da57cdc11d440136dc8b894cc18a2b44fc7f",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 17,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4614
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "GetIndifferencePoint.m",
|
| 22 |
+
"sha256": "3eee125e6001d6e45c802e5cd6483108822dbd15d65937872e0c1a1111316e8e",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 4,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 4333
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "GetfMRIMaps.m",
|
| 31 |
+
"sha256": "b1dab6c41ec7a2c9231ba4c96049a3a268f9829b109eb3caba2a978e34b73157",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 33,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 4804
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "GetfMRIMapsAtlas.m",
|
| 40 |
+
"sha256": "2edcce4a37f8d926a1d1fad1f937efa6432e409db16ef4779b85a0f358813868",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 68,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 5664
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "Graph_GroupBarMeanStd.m",
|
| 49 |
+
"sha256": "97cda6d180159e4987db1f372c1c6f11c484c2c1a7ab4a9c719e1ef1667226d1",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 99,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 6680
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "ListReadAddPrefix.m",
|
| 58 |
+
"sha256": "712ab93c4a6c8379a7ce724b6e4acaefec0f6006c8508b70ca013e1e48abc557",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 7,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 4355
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "Logistic.m",
|
| 67 |
+
"sha256": "98ba246677608ead418eddbdb5406892fd3754338fa4d93ef77d1bfe3b668d50",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 3,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 4308
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "ReadTrialMat.m",
|
| 76 |
+
"sha256": "081b083d6cbc8e79902212f3009efe8c0d644304a5cb111913ad7acd2ab69144",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 34,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 5118
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "TranslateBinMatrix.m",
|
| 85 |
+
"sha256": "ff4b0b82ca812d63858b34450cae11fd7675ced1d66a29b481a787a1372daf55",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 13,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 4569
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "Vol_Read_NIFTI.m",
|
| 94 |
+
"sha256": "9847319fcfe026c6a567d4c341d3d12beaa97b5ef448f6f2fc849ff12476c126",
|
| 95 |
+
"language": "MATLAB",
|
| 96 |
+
"lines": 4,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 4326
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "Zenodo_Code_Fig2_Generalization.m",
|
| 103 |
+
"sha256": "a16fc86a4fc983c8535e0cc975722b20dde22c82e0e09118bf42dd0acfa89d91",
|
| 104 |
+
"language": "MATLAB",
|
| 105 |
+
"lines": 136,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 7070
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "Zenodo_Code_Fig3_fMRIPrediction_WholeGM_PwMSA_PwMNSA.m",
|
| 112 |
+
"sha256": "5cf22f138b37eb6f326059a52a33be7b424e37ea3aeb5b39f90d04a4cf076a5e",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 118,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 6865
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "Zenodo_Code_Fig4_fMRIPrediction_ROI_PwMSA.m",
|
| 121 |
+
"sha256": "55eda524b288ca93edf9cd4d7c86acc01ec6e23e700f9f20576c0d86cf39cbe8",
|
| 122 |
+
"language": "MATLAB",
|
| 123 |
+
"lines": 121,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 7220
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "Zenodo_Code_Fig4_fMRIPrediction_ROI_PwMSNA.m",
|
| 130 |
+
"sha256": "d503ece47953ad1c6fb9e297c527dd3007bff70e4ac1a131a002bb2317ec6612",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 122,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 7225
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "Zenodo_Code_FigS1_Acquisition.m",
|
| 139 |
+
"sha256": "23c3ccc3697ac5dc4e2f8ed07aea00152920b375799c7d958dca22f0d4e45359",
|
| 140 |
+
"language": "MATLAB",
|
| 141 |
+
"lines": 131,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 7052
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "Zenodo_Code_FigS1_Preacquisition.m",
|
| 148 |
+
"sha256": "eaa70cc24e4f14b598105c532ba3d68bfed025bada5f855660ecb3f42c9bea5f",
|
| 149 |
+
"language": "MATLAB",
|
| 150 |
+
"lines": 134,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 7182
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "Zenodo_Code_ProportionsSmallLargeCS.m",
|
| 157 |
+
"sha256": "3cf35021173621838927d6c66605b41920c13117fd51219c9a9d4bbfc76900c9",
|
| 158 |
+
"language": "MATLAB",
|
| 159 |
+
"lines": 54,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 5351
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "vec_scale.m",
|
| 166 |
+
"sha256": "f23674322ce7905dcbe72d858d21329fd5a03fe09ab55dec6bbe7e857e6dfcbd",
|
| 167 |
+
"language": "MATLAB",
|
| 168 |
+
"lines": 23,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 4750
|
| 172 |
+
}
|
| 173 |
+
]
|
| 174 |
+
}
|
manifests/24/zenodo__16266612.json
ADDED
|
@@ -0,0 +1,282 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:16266612",
|
| 4 |
+
"url": "10.5281/zenodo.16266612",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "10_benchmarking/hmm_benchmarks.sh",
|
| 13 |
+
"sha256": "903f11f8e5983273d8de39caf8aef505709185a75718fa1db40962f9f9f05ed1",
|
| 14 |
+
"language": "Shell",
|
| 15 |
+
"lines": 24,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 15533
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "10_benchmarking/run_logregs.py",
|
| 22 |
+
"sha256": "875a2fb703b9c3b6de3aaa221ad90d3e41d7aee8f7e3b42c98bda5fbb88f8618",
|
| 23 |
+
"language": "Python",
|
| 24 |
+
"lines": 175,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 12541
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "1_srafetch/fasterqdump.sh",
|
| 31 |
+
"sha256": "f8137e797561eb90201bf7965205bf17da4b888d10538825107841107d48a80a",
|
| 32 |
+
"language": "Shell",
|
| 33 |
+
"lines": 11,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 15346
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "1_srafetch/sra_fetch.py",
|
| 40 |
+
"sha256": "af433a28cf23f19a14012b4b16e22f076c17ddb107e52f8ce292ca1a36eb9ea6",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 105,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 11076
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "2_qc_trimming/trim_zip.sh",
|
| 49 |
+
"sha256": "ab2b6a3e1a605ac3e2df7747f808742fab8c1655f4dbca110cb17a89c4aa8212",
|
| 50 |
+
"language": "Shell",
|
| 51 |
+
"lines": 102,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 15766
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "3_contigassembly/contig_assemble2.sh",
|
| 58 |
+
"sha256": "0fbb54fc272447f6576d119cb851a7e29604e21bfa99e6dcd0119af8c252f4da",
|
| 59 |
+
"language": "Shell",
|
| 60 |
+
"lines": 63,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 15733
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "3_contigassembly/repair_trimmed.sh",
|
| 67 |
+
"sha256": "d9c1c6af177877cefa882e58e05d88ebaec8dd4c3bb29b96ab75df18d80295ee",
|
| 68 |
+
"language": "Shell",
|
| 69 |
+
"lines": 37,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 15685
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "4_taxassignment/1_extract_info.sh",
|
| 76 |
+
"sha256": "b6ed1ddcc6cd077adcc7332bd08b813fce8508770e8b212b3e46949d5e961a39",
|
| 77 |
+
"language": "Shell",
|
| 78 |
+
"lines": 31,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 15492
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "4_taxassignment/2_tax_dump.sh",
|
| 85 |
+
"sha256": "87a6b416ae02a92e905ab48a5aebe825eb622c6ea6d328592ab6c58ff3450af0",
|
| 86 |
+
"language": "Shell",
|
| 87 |
+
"lines": 30,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 15455
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "4_taxassignment/kraken.sh",
|
| 94 |
+
"sha256": "d3ebc95519b2129cf4520edd347397729c887c9bc39b4cc71b31952844fe0d1c",
|
| 95 |
+
"language": "Shell",
|
| 96 |
+
"lines": 31,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 15540
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "4_taxassignment/mmseqs_assign.sh",
|
| 103 |
+
"sha256": "bfb2a6e0a5e07c37a97fa8f1cdd35e85293124e7b36a66d53ff5d558fb0f29b6",
|
| 104 |
+
"language": "Shell",
|
| 105 |
+
"lines": 13,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 15379
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "4_taxassignment/search_dict.py",
|
| 112 |
+
"sha256": "4003bc1b5df9bbd5f29d350c8bac2727729efd8954087793d18049b2e9c12328",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 27,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 9042
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "4_taxassignment/sort_kraken.R",
|
| 121 |
+
"sha256": "997b3823457f4b86bc9daeb0ae0a79f671eb27c98efb5ef64de610f687bff45c",
|
| 122 |
+
"language": "R",
|
| 123 |
+
"lines": 182,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 14970
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "4_taxassignment/sort_kraken.sh",
|
| 130 |
+
"sha256": "98aac670e3a9fb92551fbce0173fc87853e05b8c3335e05314b3db13edb5944e",
|
| 131 |
+
"language": "Shell",
|
| 132 |
+
"lines": 23,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 15475
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "4_taxassignment/tax_dict.py",
|
| 139 |
+
"sha256": "6ff4718c8c1bc25f58e72ebde8b2e3583a7d3d8f9bfec8bd7e64d9b1477798bd",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 57,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 9661
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "5_geneprediction/metaeuk_gm.sh",
|
| 148 |
+
"sha256": "e022c9731bfc86f0d04e3d98116cb9a3e3792603a9dfc82c2139f6a6578a7d32",
|
| 149 |
+
"language": "Shell",
|
| 150 |
+
"lines": 18,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 15396
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "5_geneprediction/prodigal_gm.sh",
|
| 157 |
+
"sha256": "486b9c61f6cef4f7cd5a84549bb7569400c389f617e3cca5bde534255286e356",
|
| 158 |
+
"language": "Shell",
|
| 159 |
+
"lines": 32,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 15594
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "6_pfamannotation/cat_pfams.sh",
|
| 166 |
+
"sha256": "fe97aee76089b061110385f39cadeff3a48ce1dacee1464bc2b34566b7465eda",
|
| 167 |
+
"language": "Shell",
|
| 168 |
+
"lines": 5,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 15288
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "6_pfamannotation/clean_hmmout.R",
|
| 175 |
+
"sha256": "9703fe4e17d893da1f722478768ba9da863690a1ea3caee036a59f4562236c8b",
|
| 176 |
+
"language": "R",
|
| 177 |
+
"lines": 55,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 14793
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "6_pfamannotation/extract_fasta_duf3494.py",
|
| 184 |
+
"sha256": "4e34edde4be1230fad21139560ddd94489684bf2dc05487ad0f87412bd2fd0f2",
|
| 185 |
+
"language": "Python",
|
| 186 |
+
"lines": 28,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 9281
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "6_pfamannotation/get_dufs_from_pfam.R",
|
| 193 |
+
"sha256": "c4e6418ebdf7c4638ebdb16e2ec50f44d47aac574816ea1878cdec25545869ad",
|
| 194 |
+
"language": "R",
|
| 195 |
+
"lines": 25,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 14707
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "6_pfamannotation/get_dufs_from_pfam.sh",
|
| 202 |
+
"sha256": "ddc3ee9a9898a9b7afd445d29c58ea0fa07db457decdf4f6fae412720ec09a64",
|
| 203 |
+
"language": "Shell",
|
| 204 |
+
"lines": 8,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 15308
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "6_pfamannotation/pfam_annotate.sh",
|
| 211 |
+
"sha256": "0ced83f33a3cb5cda6207d339c20e70f003b431fb7b4fdf789e32a4eb0bb8b73",
|
| 212 |
+
"language": "Shell",
|
| 213 |
+
"lines": 21,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 15447
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "7_alignseqs/align_magusehmm.sh",
|
| 220 |
+
"sha256": "6f7890123d03ff7aa5c21300335ce68e3599db51ff6c6b5f18f28292d1ac24c7",
|
| 221 |
+
"language": "Shell",
|
| 222 |
+
"lines": 15,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 15407
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "8_prepGA/clean_align.R",
|
| 229 |
+
"sha256": "74ddd5374e83a25559b869248ffcda76adf3b1481b1890f6c3e4ff8575d4b08a",
|
| 230 |
+
"language": "R",
|
| 231 |
+
"lines": 125,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 14912
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "8_prepGA/get_metadata.py",
|
| 238 |
+
"sha256": "4c08a1257af6980cad97733a0ed0b638fe7fe2e88986dfa8df6eecede500a0f0",
|
| 239 |
+
"language": "Python",
|
| 240 |
+
"lines": 123,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 11049
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "8_prepGA/id_conserved_regions.R",
|
| 247 |
+
"sha256": "d45551131cb8d916eca2308e4f55cd4b5e9b157fc19b024d632753b70a905be8",
|
| 248 |
+
"language": "R",
|
| 249 |
+
"lines": 78,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 14862
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "9_NN/run_esm_mod.py",
|
| 256 |
+
"sha256": "c0e053853c0de030378fd048519dfe4f55385ae6c666a04c8dc5f5a88235774f",
|
| 257 |
+
"language": "Python",
|
| 258 |
+
"lines": 67,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 10134
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "9_NN/run_nn.py",
|
| 265 |
+
"sha256": "cb3fe15af398125d043b1bebacdb362f4f80540a6eda0bd0d20f4e64352e424d",
|
| 266 |
+
"language": "Python",
|
| 267 |
+
"lines": 230,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 12976
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "LICENSE",
|
| 274 |
+
"sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
|
| 275 |
+
"language": "License",
|
| 276 |
+
"lines": 674,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 1,
|
| 279 |
+
"row": 2235
|
| 280 |
+
}
|
| 281 |
+
]
|
| 282 |
+
}
|
manifests/25/github.com__julianreiser__grail_switch.json
ADDED
|
@@ -0,0 +1,219 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/julianreiser/grail_switch",
|
| 4 |
+
"url": "https://github.com/julianreiser/grail_switch.git",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "72e30047b71bca071af7d1043e2c81c166c06d73",
|
| 7 |
+
"license": "CC0-1.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "GS00_prepro_prep.m",
|
| 13 |
+
"sha256": "b509cbcbab233bf4d786bdda254812bfc0633ab2c9a2a4499d38c1172de12255",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 221,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 7826
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "GS01_prepro_eeg.m",
|
| 22 |
+
"sha256": "c6dd66b3da9829b20ace8c12a894cb37958da8b70d6846511318ebe74e0c008c",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 183,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 7542
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "GS01_prepro_gait.m",
|
| 31 |
+
"sha256": "4b04254ee3d6a69b8ee8f69b2242c69d302f89a817577251fa90faf383de69a8",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 322,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 7879
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "GS02_batchprocessing.m",
|
| 40 |
+
"sha256": "13f6a168c497f22439e73d2e9d7910f9cbda6835e9ea416ef8c968357b8adb42",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 131,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 7423
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "GS03_analysis_NASA.m",
|
| 49 |
+
"sha256": "295781f6d1759926ee3afe640401d3d0bb42f1401554b85eaab4ebd3d4d98201",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 330,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 7998
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "GS04_analysis_RTaccu_modaSpecific.m",
|
| 58 |
+
"sha256": "f9b633ee76950ffffb393d8e60449ad9afbaec9331346cf29baa8cc8e7396abe",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 619,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 8223
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "GS05_createGND_modalitySpecific.m",
|
| 67 |
+
"sha256": "9febdce8b3d5490c2a51cbf7ed75a4bc89f72e6e72e8c66b95ea70debc71eeef",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 363,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 7907
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "GS06_FMUA_erp_modalitySpecific.m",
|
| 76 |
+
"sha256": "83ec23ded640c7d177c9e5d840dbfe4cf8431a3f243b5169ab507fd80b952c20",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 2109,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 8393
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "GS07_stepAnalysis.m",
|
| 85 |
+
"sha256": "a4b78422dd863d80a513c4cd7aa19bbffe3a9a0b3edbe43f23d58f4b81cde8b6",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 252,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 7894
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "LICENSE",
|
| 94 |
+
"sha256": "a2010f343487d3f7618affe54f789f5487602331c0a8d03f49e9a7c547cf0499",
|
| 95 |
+
"language": "License",
|
| 96 |
+
"lines": 121,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 1,
|
| 99 |
+
"row": 2210
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "README.md",
|
| 103 |
+
"sha256": "a37f97c80ecd91c84e00aa3b08542965007c52048e426a3a38c89bf63421440f",
|
| 104 |
+
"language": "Text",
|
| 105 |
+
"lines": 4,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 15978
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "helperfunctions/DO_MeanAmp_mod.m",
|
| 112 |
+
"sha256": "2879fb95a64c5904d18be384dcda5e63fc8743128efef8d3369405c96a667e5c",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 35,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 5005
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "helperfunctions/PredictMissingMarkers.m",
|
| 121 |
+
"sha256": "5e52524bdbf6b3cd466c1d6bd0b402bdf2e233b33cc93083d965d66e0155d62c",
|
| 122 |
+
"language": "MATLAB",
|
| 123 |
+
"lines": 287,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 7811
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "helperfunctions/gs_bin_mean.m",
|
| 130 |
+
"sha256": "1651a2410aaddb29655a8b64e0e901a94b532eefa9087b7f5d0145a78c9967df",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 85,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 6378
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "helperfunctions/gs_geterpnerspnitpc_baselineadded.m",
|
| 139 |
+
"sha256": "ed33ac86c62ac24513b34cbd8e6f55a6a27d009b5b9043d5071ce79b3abf4c3e",
|
| 140 |
+
"language": "MATLAB",
|
| 141 |
+
"lines": 247,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 7751
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "helperfunctions/gs_reaccalc.m",
|
| 148 |
+
"sha256": "83ed941430e55ad499fd486dd13c9f02bbdc498ae921b338b90b472fe076ebe9",
|
| 149 |
+
"language": "MATLAB",
|
| 150 |
+
"lines": 578,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 8327
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "helperfunctions/lb_niceBARplot.m",
|
| 157 |
+
"sha256": "edc98e9ba8aec1e78658d5123a93e1f5e86453a71eed974c742a9f8424a16bab",
|
| 158 |
+
"language": "MATLAB",
|
| 159 |
+
"lines": 106,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 6806
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "helperfunctions/lb_niceInteractionPlot.m",
|
| 166 |
+
"sha256": "86f9a67a5c4066d28911ceffc04a18fe28ea2797467ff1488e8be069dc146369",
|
| 167 |
+
"language": "MATLAB",
|
| 168 |
+
"lines": 114,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 6908
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "helperfunctions/lw_eta.m",
|
| 175 |
+
"sha256": "bcf7dada1db82d4552868a375cff5696dbe13873d297ee8bfb0f4e1d1bf098af",
|
| 176 |
+
"language": "MATLAB",
|
| 177 |
+
"lines": 28,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 5117
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "helperfunctions/lw_fdr.m",
|
| 184 |
+
"sha256": "79df1f5781fa36da346d47552680e67617ffbfe22d464a62ceaaffac15f3c75b",
|
| 185 |
+
"language": "MATLAB",
|
| 186 |
+
"lines": 75,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 6433
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "helperfunctions/lw_niceInteractionPlot3way.m",
|
| 193 |
+
"sha256": "5442fbdbe20193f7abe6de8d607bdef4879363ed6fa4d201abac7c0a5af40c63",
|
| 194 |
+
"language": "MATLAB",
|
| 195 |
+
"lines": 118,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 6914
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "helperfunctions/lw_niceLINEplot.m",
|
| 202 |
+
"sha256": "0e60835de7144f3ec7dcdeae460e65722a4f397cceafc107942f9a2ab0e2edd5",
|
| 203 |
+
"language": "MATLAB",
|
| 204 |
+
"lines": 129,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 6964
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "helperfunctions/lw_qq.m",
|
| 211 |
+
"sha256": "ddc9116220988efc97f0cee6d52085636254741f56a469df7986f52231e405ef",
|
| 212 |
+
"language": "MATLAB",
|
| 213 |
+
"lines": 35,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 5412
|
| 217 |
+
}
|
| 218 |
+
]
|
| 219 |
+
}
|
manifests/26/github.com__hilab-git__word.json
ADDED
|
@@ -0,0 +1,48 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/hilab-git/word",
|
| 4 |
+
"url": "https://github.com/HiLab-git/WORD",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "c5ab3973ff74188b2f7bdf666bff8b583878ace7",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 674,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2235
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "82daf95bb3006f523db67a9f0da8f28c86fe452f51186111d23c55800b978938",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 57,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16154
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "scribbles_generator.py",
|
| 31 |
+
"sha256": "10952470be5942afc82c0545748e9bb86eb20a9d918c738b6f0b0ee91bd25776",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 275,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 13225
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "word_metrics_computing.py",
|
| 40 |
+
"sha256": "786b30fd436950e631fce0a2fd8402fc6077b21312df51e21d37b57456c587de",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 44,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 9690
|
| 46 |
+
}
|
| 47 |
+
]
|
| 48 |
+
}
|
manifests/26/github.com__kmnp__vpt.json
ADDED
|
@@ -0,0 +1,615 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/kmnp/vpt",
|
| 4 |
+
"url": "https://github.com/KMnP/vpt",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "4410440ec1b489f24f66b9fad3d9b10ff3443567",
|
| 7 |
+
"license": "CC-BY-NC-4.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "with_conditions",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "56ec25b1c74445116f460ab36616e9b509762b53b367d7de24f1d299b8cd8182",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 399,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4297
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "README.md",
|
| 22 |
+
"sha256": "696b1ad2e31943af69164fc3dc7a203fd1a64826f6f5be7983a41b5312adcd5a",
|
| 23 |
+
"language": "Text",
|
| 24 |
+
"lines": 157,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 16170
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "demo.ipynb",
|
| 31 |
+
"sha256": "68ea837308b41790f37dad88d82e25ffb74cc3bba04b36dfdd788e4be00cb071",
|
| 32 |
+
"language": "Jupyter",
|
| 33 |
+
"lines": 281,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 3939
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "env_setup.sh",
|
| 40 |
+
"sha256": "6d99fc9689f7a9a1881d841538f536800774fe118b000da720c55b63f3772a0b",
|
| 41 |
+
"language": "Shell",
|
| 42 |
+
"lines": 28,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 15457
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "launch.py",
|
| 49 |
+
"sha256": "00542920b3697f2b63a7509bf1b431733dbca9f830132cf5a4142e45f854a8b3",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 113,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 10712
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "src/configs/config.py",
|
| 58 |
+
"sha256": "9c5afe8eed9be811aff80d9cc04d4643dd36a3dc6da5932dfff1215680577417",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 142,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 11606
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "src/configs/config_node.py",
|
| 67 |
+
"sha256": "0cf7b7d2b55d1996bab897b73950ae67f9aff28975406eca94639a29687c401a",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 26,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 9005
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "src/configs/vit_configs.py",
|
| 76 |
+
"sha256": "46dbfe2b6216337b48db5c68aaf3a36c4d37c2192c806e978fdf23b74dd0359e",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 102,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 10472
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "src/data/datasets/json_dataset.py",
|
| 85 |
+
"sha256": "29406e43275a750eaf8ead13bc35946faa9443fd85f48e70ce6f2b0f161ddff8",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 174,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 11868
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "src/data/datasets/tf_dataset.py",
|
| 94 |
+
"sha256": "e4e9f6d0c31cd0fc865fcd086275e91c50975ca9d399d2e94c602ee81d36a663",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 209,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 12519
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "src/data/loader.py",
|
| 103 |
+
"sha256": "8d40659831a404cee752815f6a60a957e9b5bd59f0787dfd418b936107dd91c0",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 117,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 10565
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "src/data/transforms.py",
|
| 112 |
+
"sha256": "59336fe56626ed6157fb82cdaaff56308b4e032a4356bdd913002c9cd27ab191",
|
| 113 |
+
"language": "Python",
|
| 114 |
+
"lines": 41,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 9334
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "src/data/vtab_datasets/__init__.py",
|
| 121 |
+
"sha256": "cea326676b94d294007a542725e0c806697020f8f3d17b4a66af023c7c4ab5fb",
|
| 122 |
+
"language": "Python",
|
| 123 |
+
"lines": 16,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 9026
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "src/data/vtab_datasets/base.py",
|
| 130 |
+
"sha256": "465ec99840d1e68201fe971a33c4b4bef5fbf6c34182d8521c0d07922bd846a1",
|
| 131 |
+
"language": "Python",
|
| 132 |
+
"lines": 492,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 14018
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "src/data/vtab_datasets/caltech.py",
|
| 139 |
+
"sha256": "80e1737a6e3fcecc3db571f2e6ce40f4b9175dff367442364daca6665742dcd4",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 87,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 10632
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "src/data/vtab_datasets/cifar.py",
|
| 148 |
+
"sha256": "ecb8d7e024dfc771f96d052052f198695b0e6a4a19f72f3d879ef28f1ad19538",
|
| 149 |
+
"language": "Python",
|
| 150 |
+
"lines": 92,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 10839
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "src/data/vtab_datasets/clevr.py",
|
| 157 |
+
"sha256": "b253e34444f9c68146e967afd3bc06832fc1eabc0fbac1c8ab88166dd58fb497",
|
| 158 |
+
"language": "Python",
|
| 159 |
+
"lines": 127,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 11183
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "src/data/vtab_datasets/diabetic_retinopathy.py",
|
| 166 |
+
"sha256": "f6dfa4b41bfb1f5816302d46f74c03a7953c574cb708b1fc72f5911ef1df767a",
|
| 167 |
+
"language": "Python",
|
| 168 |
+
"lines": 198,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 12758
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "src/data/vtab_datasets/dmlab.py",
|
| 175 |
+
"sha256": "f6841ce45c3cd918b47c4988a111dfd9c97e2c032d481486a01c49ed8455ea09",
|
| 176 |
+
"language": "Python",
|
| 177 |
+
"lines": 84,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 10314
|
| 181 |
+
},
|
| 182 |
+
{
|
| 183 |
+
"path": "src/data/vtab_datasets/dsprites.py",
|
| 184 |
+
"sha256": "cd84aa3aa4f691218890ae26b1631287fa5876c842c1858c66e1f1b53ae21dd4",
|
| 185 |
+
"language": "Python",
|
| 186 |
+
"lines": 117,
|
| 187 |
+
"truncated": false,
|
| 188 |
+
"block": 19,
|
| 189 |
+
"row": 11658
|
| 190 |
+
},
|
| 191 |
+
{
|
| 192 |
+
"path": "src/data/vtab_datasets/dtd.py",
|
| 193 |
+
"sha256": "051ca1243ff3a030bac64ac7b1650431cd2ee3caea0653d45322cd4b700ae805",
|
| 194 |
+
"language": "Python",
|
| 195 |
+
"lines": 77,
|
| 196 |
+
"truncated": false,
|
| 197 |
+
"block": 19,
|
| 198 |
+
"row": 10192
|
| 199 |
+
},
|
| 200 |
+
{
|
| 201 |
+
"path": "src/data/vtab_datasets/eurosat.py",
|
| 202 |
+
"sha256": "7b22dbc9738ab7d8575ee828ca76492f4a588b6703eee2b553a688413367d430",
|
| 203 |
+
"language": "Python",
|
| 204 |
+
"lines": 99,
|
| 205 |
+
"truncated": false,
|
| 206 |
+
"block": 19,
|
| 207 |
+
"row": 10645
|
| 208 |
+
},
|
| 209 |
+
{
|
| 210 |
+
"path": "src/data/vtab_datasets/kitti.py",
|
| 211 |
+
"sha256": "bce7a23772963977621e7f53df2f35afbe203f24f811205dc19808771e725823",
|
| 212 |
+
"language": "Python",
|
| 213 |
+
"lines": 212,
|
| 214 |
+
"truncated": false,
|
| 215 |
+
"block": 19,
|
| 216 |
+
"row": 12582
|
| 217 |
+
},
|
| 218 |
+
{
|
| 219 |
+
"path": "src/data/vtab_datasets/oxford_flowers102.py",
|
| 220 |
+
"sha256": "2b60ae6614b78bbc14066ed6ef93dfb63161d37d7178f2c67d5e11ee8fa8001e",
|
| 221 |
+
"language": "Python",
|
| 222 |
+
"lines": 102,
|
| 223 |
+
"truncated": false,
|
| 224 |
+
"block": 19,
|
| 225 |
+
"row": 10830
|
| 226 |
+
},
|
| 227 |
+
{
|
| 228 |
+
"path": "src/data/vtab_datasets/oxford_iiit_pet.py",
|
| 229 |
+
"sha256": "13d0690f1118f50e75a7c22a5578fb11bf43b6acb6dd072e07bdcf87c8adfcfb",
|
| 230 |
+
"language": "Python",
|
| 231 |
+
"lines": 85,
|
| 232 |
+
"truncated": false,
|
| 233 |
+
"block": 19,
|
| 234 |
+
"row": 10736
|
| 235 |
+
},
|
| 236 |
+
{
|
| 237 |
+
"path": "src/data/vtab_datasets/patch_camelyon.py",
|
| 238 |
+
"sha256": "fb5502b81802fafc0b06001b1b6376a1e6298667c36c6c82a4fe9473f9fd3f2e",
|
| 239 |
+
"language": "Python",
|
| 240 |
+
"lines": 67,
|
| 241 |
+
"truncated": false,
|
| 242 |
+
"block": 19,
|
| 243 |
+
"row": 10066
|
| 244 |
+
},
|
| 245 |
+
{
|
| 246 |
+
"path": "src/data/vtab_datasets/registry.py",
|
| 247 |
+
"sha256": "53bbf76ab326bbc3605034d1b3ba0c7e0f827a8f45ce517933a5affaa174ad13",
|
| 248 |
+
"language": "Python",
|
| 249 |
+
"lines": 149,
|
| 250 |
+
"truncated": false,
|
| 251 |
+
"block": 19,
|
| 252 |
+
"row": 11672
|
| 253 |
+
},
|
| 254 |
+
{
|
| 255 |
+
"path": "src/data/vtab_datasets/resisc45.py",
|
| 256 |
+
"sha256": "73a0403661e75eb8b53865d398917f1d556d89301693c06f2c760408a37f4485",
|
| 257 |
+
"language": "Python",
|
| 258 |
+
"lines": 93,
|
| 259 |
+
"truncated": false,
|
| 260 |
+
"block": 19,
|
| 261 |
+
"row": 10603
|
| 262 |
+
},
|
| 263 |
+
{
|
| 264 |
+
"path": "src/data/vtab_datasets/smallnorb.py",
|
| 265 |
+
"sha256": "e2ebeb0cd6d28bc7f7969ee3dc21447fea266fcc3228eaf4b3319cf8933ce0e5",
|
| 266 |
+
"language": "Python",
|
| 267 |
+
"lines": 95,
|
| 268 |
+
"truncated": false,
|
| 269 |
+
"block": 19,
|
| 270 |
+
"row": 10891
|
| 271 |
+
},
|
| 272 |
+
{
|
| 273 |
+
"path": "src/data/vtab_datasets/sun397.py",
|
| 274 |
+
"sha256": "10405992f9db1976253552b9c6621a8e84e8fa329bbd51bda78d4f89b06ea072",
|
| 275 |
+
"language": "Python",
|
| 276 |
+
"lines": 74,
|
| 277 |
+
"truncated": false,
|
| 278 |
+
"block": 19,
|
| 279 |
+
"row": 10154
|
| 280 |
+
},
|
| 281 |
+
{
|
| 282 |
+
"path": "src/data/vtab_datasets/svhn.py",
|
| 283 |
+
"sha256": "a40a6c1d1b67e7d9c18cebbcc594ff38e9882e18ded616fabf90f4cd4bb245c8",
|
| 284 |
+
"language": "Python",
|
| 285 |
+
"lines": 104,
|
| 286 |
+
"truncated": false,
|
| 287 |
+
"block": 19,
|
| 288 |
+
"row": 11039
|
| 289 |
+
},
|
| 290 |
+
{
|
| 291 |
+
"path": "src/engine/eval/multilabel.py",
|
| 292 |
+
"sha256": "257a8b52eba6929fb0f16123f1f8bdf4e4220848bc65477916d6f246048c989a",
|
| 293 |
+
"language": "Python",
|
| 294 |
+
"lines": 156,
|
| 295 |
+
"truncated": false,
|
| 296 |
+
"block": 19,
|
| 297 |
+
"row": 11461
|
| 298 |
+
},
|
| 299 |
+
{
|
| 300 |
+
"path": "src/engine/eval/singlelabel.py",
|
| 301 |
+
"sha256": "4476365ee5065037fbe116f05be7796ea04dbd0cf6433e78982b7c10e49ec51a",
|
| 302 |
+
"language": "Python",
|
| 303 |
+
"lines": 97,
|
| 304 |
+
"truncated": false,
|
| 305 |
+
"block": 19,
|
| 306 |
+
"row": 10556
|
| 307 |
+
},
|
| 308 |
+
{
|
| 309 |
+
"path": "src/engine/evaluator.py",
|
| 310 |
+
"sha256": "60516f7533d622ff927cb0fd2b6a1e689562e904dc01e8639179a35218b4b7f6",
|
| 311 |
+
"language": "Python",
|
| 312 |
+
"lines": 115,
|
| 313 |
+
"truncated": false,
|
| 314 |
+
"block": 19,
|
| 315 |
+
"row": 10927
|
| 316 |
+
},
|
| 317 |
+
{
|
| 318 |
+
"path": "src/engine/trainer.py",
|
| 319 |
+
"sha256": "f9f779bf83450ef2ed8f0be043c47d1b461698b6293319392882014c79a2e2e8",
|
| 320 |
+
"language": "Python",
|
| 321 |
+
"lines": 342,
|
| 322 |
+
"truncated": false,
|
| 323 |
+
"block": 19,
|
| 324 |
+
"row": 13559
|
| 325 |
+
},
|
| 326 |
+
{
|
| 327 |
+
"path": "src/models/build_model.py",
|
| 328 |
+
"sha256": "4712b2a1b10e13c1fea079cc5d19cbcd93f761971f429f7005e0a5c1486cf1cc",
|
| 329 |
+
"language": "Python",
|
| 330 |
+
"lines": 80,
|
| 331 |
+
"truncated": false,
|
| 332 |
+
"block": 19,
|
| 333 |
+
"row": 10035
|
| 334 |
+
},
|
| 335 |
+
{
|
| 336 |
+
"path": "src/models/build_vit_backbone.py",
|
| 337 |
+
"sha256": "9d8d33c89852013854c46fd950724929cebee7e9c51a367827f856d61d8eb576",
|
| 338 |
+
"language": "Python",
|
| 339 |
+
"lines": 404,
|
| 340 |
+
"truncated": false,
|
| 341 |
+
"block": 19,
|
| 342 |
+
"row": 13601
|
| 343 |
+
},
|
| 344 |
+
{
|
| 345 |
+
"path": "src/models/convnext.py",
|
| 346 |
+
"sha256": "bff84438f693a651e0496c7127c093c87112178d53a12f281b49909d202dd94b",
|
| 347 |
+
"language": "Python",
|
| 348 |
+
"lines": 233,
|
| 349 |
+
"truncated": false,
|
| 350 |
+
"block": 19,
|
| 351 |
+
"row": 13035
|
| 352 |
+
},
|
| 353 |
+
{
|
| 354 |
+
"path": "src/models/convnext_backbone/convnext.py",
|
| 355 |
+
"sha256": "174ef2a61611c23434baa28fe4c01a2790314a5d603f80e1c5336de243e25f77",
|
| 356 |
+
"language": "Python",
|
| 357 |
+
"lines": 199,
|
| 358 |
+
"truncated": false,
|
| 359 |
+
"block": 19,
|
| 360 |
+
"row": 13014
|
| 361 |
+
},
|
| 362 |
+
{
|
| 363 |
+
"path": "src/models/mlp.py",
|
| 364 |
+
"sha256": "2c200d412fe275517981877d24d53915bbb2155257d6721c8fac948591b2c6d9",
|
| 365 |
+
"language": "Python",
|
| 366 |
+
"lines": 66,
|
| 367 |
+
"truncated": false,
|
| 368 |
+
"block": 19,
|
| 369 |
+
"row": 9892
|
| 370 |
+
},
|
| 371 |
+
{
|
| 372 |
+
"path": "src/models/resnet.py",
|
| 373 |
+
"sha256": "f3beda55b76703a10c0997c96614760fc2691bc2d25e327a311137a9b09f2a49",
|
| 374 |
+
"language": "Python",
|
| 375 |
+
"lines": 460,
|
| 376 |
+
"truncated": false,
|
| 377 |
+
"block": 19,
|
| 378 |
+
"row": 14020
|
| 379 |
+
},
|
| 380 |
+
{
|
| 381 |
+
"path": "src/models/vit_adapter/adapter_block.py",
|
| 382 |
+
"sha256": "62bc0942479e1a6a98a515f82d167bfb3675289a2005ce84d2859e4b4c8a6c93",
|
| 383 |
+
"language": "Python",
|
| 384 |
+
"lines": 84,
|
| 385 |
+
"truncated": false,
|
| 386 |
+
"block": 19,
|
| 387 |
+
"row": 10101
|
| 388 |
+
},
|
| 389 |
+
{
|
| 390 |
+
"path": "src/models/vit_adapter/vit.py",
|
| 391 |
+
"sha256": "eb30677b154472f90a82a962be0b887a18f2774d4a3162fae88d9a8c6ae59306",
|
| 392 |
+
"language": "Python",
|
| 393 |
+
"lines": 210,
|
| 394 |
+
"truncated": false,
|
| 395 |
+
"block": 19,
|
| 396 |
+
"row": 13061
|
| 397 |
+
},
|
| 398 |
+
{
|
| 399 |
+
"path": "src/models/vit_adapter/vit_mae.py",
|
| 400 |
+
"sha256": "31ddb8da7c827f72a78a84fcd23400e4ec5159156b3e9baaa760a4c0aae9e865",
|
| 401 |
+
"language": "Python",
|
| 402 |
+
"lines": 124,
|
| 403 |
+
"truncated": false,
|
| 404 |
+
"block": 19,
|
| 405 |
+
"row": 11134
|
| 406 |
+
},
|
| 407 |
+
{
|
| 408 |
+
"path": "src/models/vit_adapter/vit_moco.py",
|
| 409 |
+
"sha256": "a55b173e233026383016129d4b4a84b7b0d13f2af83a16b660a9cb417fde7aa7",
|
| 410 |
+
"language": "Python",
|
| 411 |
+
"lines": 99,
|
| 412 |
+
"truncated": false,
|
| 413 |
+
"block": 19,
|
| 414 |
+
"row": 10450
|
| 415 |
+
},
|
| 416 |
+
{
|
| 417 |
+
"path": "src/models/vit_backbones/swin_transformer.py",
|
| 418 |
+
"sha256": "579ac0ea04e90800396944cb1de821d2acaa2b32b76bea5a07c100aaa3b7cc62",
|
| 419 |
+
"language": "Python",
|
| 420 |
+
"lines": 644,
|
| 421 |
+
"truncated": false,
|
| 422 |
+
"block": 19,
|
| 423 |
+
"row": 14336
|
| 424 |
+
},
|
| 425 |
+
{
|
| 426 |
+
"path": "src/models/vit_backbones/vit.py",
|
| 427 |
+
"sha256": "f60b270008164b0cc88db5fbafb19d2c28f7c7b77b857a7fff4b10b747c79ffe",
|
| 428 |
+
"language": "Python",
|
| 429 |
+
"lines": 516,
|
| 430 |
+
"truncated": false,
|
| 431 |
+
"block": 19,
|
| 432 |
+
"row": 14164
|
| 433 |
+
},
|
| 434 |
+
{
|
| 435 |
+
"path": "src/models/vit_backbones/vit_mae.py",
|
| 436 |
+
"sha256": "a045d131df52d529f09c593b60da597df1bfe6ea96edcd099e418c767f91cd17",
|
| 437 |
+
"language": "Python",
|
| 438 |
+
"lines": 83,
|
| 439 |
+
"truncated": false,
|
| 440 |
+
"block": 19,
|
| 441 |
+
"row": 10145
|
| 442 |
+
},
|
| 443 |
+
{
|
| 444 |
+
"path": "src/models/vit_backbones/vit_moco.py",
|
| 445 |
+
"sha256": "ac12eaf8dd6b80d80ee11d72489d3c82a2a8713501474b9eff48fb35a3246854",
|
| 446 |
+
"language": "Python",
|
| 447 |
+
"lines": 142,
|
| 448 |
+
"truncated": false,
|
| 449 |
+
"block": 19,
|
| 450 |
+
"row": 12177
|
| 451 |
+
},
|
| 452 |
+
{
|
| 453 |
+
"path": "src/models/vit_models.py",
|
| 454 |
+
"sha256": "703a2406cb9db17a8750f251e2e76cd647fd23d7c00b9efbbc71d262d1455db7",
|
| 455 |
+
"language": "Python",
|
| 456 |
+
"lines": 335,
|
| 457 |
+
"truncated": false,
|
| 458 |
+
"block": 19,
|
| 459 |
+
"row": 13640
|
| 460 |
+
},
|
| 461 |
+
{
|
| 462 |
+
"path": "src/models/vit_prompt/swin_transformer.py",
|
| 463 |
+
"sha256": "6d3a015cc27fd719328197ed72bf26901301c91a82272527c8da825ae00ebc47",
|
| 464 |
+
"language": "Python",
|
| 465 |
+
"lines": 522,
|
| 466 |
+
"truncated": false,
|
| 467 |
+
"block": 19,
|
| 468 |
+
"row": 14152
|
| 469 |
+
},
|
| 470 |
+
{
|
| 471 |
+
"path": "src/models/vit_prompt/vit.py",
|
| 472 |
+
"sha256": "06613eabb95b3b488c46957334bf4cf0d6fbe875afff9785eb1787d09581af1a",
|
| 473 |
+
"language": "Python",
|
| 474 |
+
"lines": 169,
|
| 475 |
+
"truncated": false,
|
| 476 |
+
"block": 19,
|
| 477 |
+
"row": 12201
|
| 478 |
+
},
|
| 479 |
+
{
|
| 480 |
+
"path": "src/models/vit_prompt/vit_ablations.py",
|
| 481 |
+
"sha256": "a49b2a6d49ad48e390d540eb1af7ad1dd7877fd165bd7d4a93a561b5be133291",
|
| 482 |
+
"language": "Python",
|
| 483 |
+
"lines": 527,
|
| 484 |
+
"truncated": false,
|
| 485 |
+
"block": 19,
|
| 486 |
+
"row": 14239
|
| 487 |
+
},
|
| 488 |
+
{
|
| 489 |
+
"path": "src/models/vit_prompt/vit_mae.py",
|
| 490 |
+
"sha256": "6ee747aef45135002c050c72009349076403b73ca75afb0586e937780d6678f8",
|
| 491 |
+
"language": "Python",
|
| 492 |
+
"lines": 177,
|
| 493 |
+
"truncated": false,
|
| 494 |
+
"block": 19,
|
| 495 |
+
"row": 12362
|
| 496 |
+
},
|
| 497 |
+
{
|
| 498 |
+
"path": "src/models/vit_prompt/vit_moco.py",
|
| 499 |
+
"sha256": "e30c8fb0420e8a1ff6b64dd2137a91e2c120a8e4e15d7e9b1f6419cbd72438e9",
|
| 500 |
+
"language": "Python",
|
| 501 |
+
"lines": 136,
|
| 502 |
+
"truncated": false,
|
| 503 |
+
"block": 19,
|
| 504 |
+
"row": 11547
|
| 505 |
+
},
|
| 506 |
+
{
|
| 507 |
+
"path": "src/solver/losses.py",
|
| 508 |
+
"sha256": "d4b6e969a026355aaa0202d2641163088cc0aab7bfc4d64171db861d0c45b1c8",
|
| 509 |
+
"language": "Python",
|
| 510 |
+
"lines": 83,
|
| 511 |
+
"truncated": false,
|
| 512 |
+
"block": 19,
|
| 513 |
+
"row": 10023
|
| 514 |
+
},
|
| 515 |
+
{
|
| 516 |
+
"path": "src/solver/lr_scheduler.py",
|
| 517 |
+
"sha256": "71f2d6479beaded06de27be44d3e041431dd47246b700f5573f1ee9dd755bb62",
|
| 518 |
+
"language": "Python",
|
| 519 |
+
"lines": 94,
|
| 520 |
+
"truncated": false,
|
| 521 |
+
"block": 19,
|
| 522 |
+
"row": 10667
|
| 523 |
+
},
|
| 524 |
+
{
|
| 525 |
+
"path": "src/solver/optimizer.py",
|
| 526 |
+
"sha256": "8a755984b4d00e415751a33d4bfaed0ca5fff472b2ffe28072dada788e6ff120",
|
| 527 |
+
"language": "Python",
|
| 528 |
+
"lines": 234,
|
| 529 |
+
"truncated": false,
|
| 530 |
+
"block": 19,
|
| 531 |
+
"row": 13038
|
| 532 |
+
},
|
| 533 |
+
{
|
| 534 |
+
"path": "src/utils/distributed.py",
|
| 535 |
+
"sha256": "bf88c1133549a1f295b84e393847691bd6975f33bba7e318db0fcab51cdcae2d",
|
| 536 |
+
"language": "Python",
|
| 537 |
+
"lines": 168,
|
| 538 |
+
"truncated": false,
|
| 539 |
+
"block": 19,
|
| 540 |
+
"row": 11652
|
| 541 |
+
},
|
| 542 |
+
{
|
| 543 |
+
"path": "src/utils/file_io.py",
|
| 544 |
+
"sha256": "bb720243ded332b24107a2b8a4064875d9e19a7aaa5ad1d8bfc09009d2e8c710",
|
| 545 |
+
"language": "Python",
|
| 546 |
+
"lines": 11,
|
| 547 |
+
"truncated": false,
|
| 548 |
+
"block": 19,
|
| 549 |
+
"row": 8796
|
| 550 |
+
},
|
| 551 |
+
{
|
| 552 |
+
"path": "src/utils/io_utils.py",
|
| 553 |
+
"sha256": "13349fdb21c426e6ed5919ea00c5eac67d2222a870ac9c6af548b8331b401d2c",
|
| 554 |
+
"language": "Python",
|
| 555 |
+
"lines": 68,
|
| 556 |
+
"truncated": false,
|
| 557 |
+
"block": 19,
|
| 558 |
+
"row": 9799
|
| 559 |
+
},
|
| 560 |
+
{
|
| 561 |
+
"path": "src/utils/logging.py",
|
| 562 |
+
"sha256": "6f054df65b232d843ff8a4372937ba2ab3789575a46f2bcbadf58a1df6ab1aa8",
|
| 563 |
+
"language": "Python",
|
| 564 |
+
"lines": 186,
|
| 565 |
+
"truncated": false,
|
| 566 |
+
"block": 19,
|
| 567 |
+
"row": 12243
|
| 568 |
+
},
|
| 569 |
+
{
|
| 570 |
+
"path": "src/utils/train_utils.py",
|
| 571 |
+
"sha256": "a9c1df1f5795f9af96b3677916766a75cb50964e6b0a6a1f7d454ca0e58907f6",
|
| 572 |
+
"language": "Python",
|
| 573 |
+
"lines": 37,
|
| 574 |
+
"truncated": false,
|
| 575 |
+
"block": 19,
|
| 576 |
+
"row": 9187
|
| 577 |
+
},
|
| 578 |
+
{
|
| 579 |
+
"path": "src/utils/vis_utils.py",
|
| 580 |
+
"sha256": "cf813899b3a735bacbd2751570b29d89b6b07111f9abb4c86d81bc615abcb760",
|
| 581 |
+
"language": "Python",
|
| 582 |
+
"lines": 300,
|
| 583 |
+
"truncated": false,
|
| 584 |
+
"block": 19,
|
| 585 |
+
"row": 13325
|
| 586 |
+
},
|
| 587 |
+
{
|
| 588 |
+
"path": "train.py",
|
| 589 |
+
"sha256": "e86fab70fb854a78283a7f56373bfac9c0555664cfdcd69d2cde6ec3b5a8b57f",
|
| 590 |
+
"language": "Python",
|
| 591 |
+
"lines": 132,
|
| 592 |
+
"truncated": false,
|
| 593 |
+
"block": 19,
|
| 594 |
+
"row": 10964
|
| 595 |
+
},
|
| 596 |
+
{
|
| 597 |
+
"path": "tune_fgvc.py",
|
| 598 |
+
"sha256": "ecc2109cc1d56883d8ec4db487a672bfe1d75261568774c7cf69fbe01096d303",
|
| 599 |
+
"language": "Python",
|
| 600 |
+
"lines": 208,
|
| 601 |
+
"truncated": false,
|
| 602 |
+
"block": 19,
|
| 603 |
+
"row": 12193
|
| 604 |
+
},
|
| 605 |
+
{
|
| 606 |
+
"path": "tune_vtab.py",
|
| 607 |
+
"sha256": "b91beafbd38000e080dada33263e4b307b1ba2cac7099e78575eecebc9d503a2",
|
| 608 |
+
"language": "Python",
|
| 609 |
+
"lines": 297,
|
| 610 |
+
"truncated": false,
|
| 611 |
+
"block": 19,
|
| 612 |
+
"row": 13151
|
| 613 |
+
}
|
| 614 |
+
]
|
| 615 |
+
}
|
manifests/27/zenodo__16218570.json
ADDED
|
@@ -0,0 +1,174 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:16218570",
|
| 4 |
+
"url": "https://zenodo.org/records/16218570",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "GetFearPerSPMBeta.m",
|
| 13 |
+
"sha256": "8cd8c586ac5dc27b8375662c2d13da57cdc11d440136dc8b894cc18a2b44fc7f",
|
| 14 |
+
"language": "MATLAB",
|
| 15 |
+
"lines": 17,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 4614
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "GetIndifferencePoint.m",
|
| 22 |
+
"sha256": "3eee125e6001d6e45c802e5cd6483108822dbd15d65937872e0c1a1111316e8e",
|
| 23 |
+
"language": "MATLAB",
|
| 24 |
+
"lines": 4,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 4333
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "GetfMRIMaps.m",
|
| 31 |
+
"sha256": "b1dab6c41ec7a2c9231ba4c96049a3a268f9829b109eb3caba2a978e34b73157",
|
| 32 |
+
"language": "MATLAB",
|
| 33 |
+
"lines": 33,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 4804
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "GetfMRIMapsAtlas.m",
|
| 40 |
+
"sha256": "2edcce4a37f8d926a1d1fad1f937efa6432e409db16ef4779b85a0f358813868",
|
| 41 |
+
"language": "MATLAB",
|
| 42 |
+
"lines": 68,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 5664
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "Graph_GroupBarMeanStd.m",
|
| 49 |
+
"sha256": "97cda6d180159e4987db1f372c1c6f11c484c2c1a7ab4a9c719e1ef1667226d1",
|
| 50 |
+
"language": "MATLAB",
|
| 51 |
+
"lines": 99,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 6680
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "ListReadAddPrefix.m",
|
| 58 |
+
"sha256": "712ab93c4a6c8379a7ce724b6e4acaefec0f6006c8508b70ca013e1e48abc557",
|
| 59 |
+
"language": "MATLAB",
|
| 60 |
+
"lines": 7,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 4355
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "Logistic.m",
|
| 67 |
+
"sha256": "98ba246677608ead418eddbdb5406892fd3754338fa4d93ef77d1bfe3b668d50",
|
| 68 |
+
"language": "MATLAB",
|
| 69 |
+
"lines": 3,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 4308
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "ReadTrialMat.m",
|
| 76 |
+
"sha256": "081b083d6cbc8e79902212f3009efe8c0d644304a5cb111913ad7acd2ab69144",
|
| 77 |
+
"language": "MATLAB",
|
| 78 |
+
"lines": 34,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 5118
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "TranslateBinMatrix.m",
|
| 85 |
+
"sha256": "ff4b0b82ca812d63858b34450cae11fd7675ced1d66a29b481a787a1372daf55",
|
| 86 |
+
"language": "MATLAB",
|
| 87 |
+
"lines": 13,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 4569
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "Vol_Read_NIFTI.m",
|
| 94 |
+
"sha256": "9847319fcfe026c6a567d4c341d3d12beaa97b5ef448f6f2fc849ff12476c126",
|
| 95 |
+
"language": "MATLAB",
|
| 96 |
+
"lines": 4,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 4326
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "Zenodo_Code_Fig2_Generalization.m",
|
| 103 |
+
"sha256": "a16fc86a4fc983c8535e0cc975722b20dde22c82e0e09118bf42dd0acfa89d91",
|
| 104 |
+
"language": "MATLAB",
|
| 105 |
+
"lines": 136,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 7070
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "Zenodo_Code_Fig3_fMRIPrediction_WholeGM_PwMSA_PwMNSA.m",
|
| 112 |
+
"sha256": "5cf22f138b37eb6f326059a52a33be7b424e37ea3aeb5b39f90d04a4cf076a5e",
|
| 113 |
+
"language": "MATLAB",
|
| 114 |
+
"lines": 118,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 6865
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "Zenodo_Code_Fig4_fMRIPrediction_ROI_PwMSA.m",
|
| 121 |
+
"sha256": "55eda524b288ca93edf9cd4d7c86acc01ec6e23e700f9f20576c0d86cf39cbe8",
|
| 122 |
+
"language": "MATLAB",
|
| 123 |
+
"lines": 121,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 7220
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "Zenodo_Code_Fig4_fMRIPrediction_ROI_PwMSNA.m",
|
| 130 |
+
"sha256": "d503ece47953ad1c6fb9e297c527dd3007bff70e4ac1a131a002bb2317ec6612",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 122,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 7225
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "Zenodo_Code_FigS1_Acquisition.m",
|
| 139 |
+
"sha256": "23c3ccc3697ac5dc4e2f8ed07aea00152920b375799c7d958dca22f0d4e45359",
|
| 140 |
+
"language": "MATLAB",
|
| 141 |
+
"lines": 131,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 7052
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "Zenodo_Code_FigS1_Preacquisition.m",
|
| 148 |
+
"sha256": "eaa70cc24e4f14b598105c532ba3d68bfed025bada5f855660ecb3f42c9bea5f",
|
| 149 |
+
"language": "MATLAB",
|
| 150 |
+
"lines": 134,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 7182
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "Zenodo_Code_ProportionsSmallLargeCS.m",
|
| 157 |
+
"sha256": "3cf35021173621838927d6c66605b41920c13117fd51219c9a9d4bbfc76900c9",
|
| 158 |
+
"language": "MATLAB",
|
| 159 |
+
"lines": 54,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 5351
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "vec_scale.m",
|
| 166 |
+
"sha256": "f23674322ce7905dcbe72d858d21329fd5a03fe09ab55dec6bbe7e857e6dfcbd",
|
| 167 |
+
"language": "MATLAB",
|
| 168 |
+
"lines": 23,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 4750
|
| 172 |
+
}
|
| 173 |
+
]
|
| 174 |
+
}
|
manifests/28/github.com__danclab__laminar_motor_erf.json
ADDED
|
@@ -0,0 +1,183 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/danclab/laminar_motor_erf",
|
| 4 |
+
"url": "https://github.com/danclab/laminar_motor_erf/",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "c4a2f09d40615349d710ed32e73ea22668ef26a1",
|
| 7 |
+
"license": "GPL-3.0",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "LICENSE",
|
| 13 |
+
"sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
|
| 14 |
+
"language": "License",
|
| 15 |
+
"lines": 674,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 1,
|
| 18 |
+
"row": 2235
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "pipeline_01_raw_prep.py",
|
| 22 |
+
"sha256": "de4d361464b02550d6d60dfe951f6e5df13ab80f8cb8ee8b21cc4c725e14c746",
|
| 23 |
+
"language": "Python",
|
| 24 |
+
"lines": 393,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 13824
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "pipeline_02_adjust_events.py",
|
| 31 |
+
"sha256": "622a39771c6c4cca7ef1857396420a27188836f16c9f60fdfa33e3a2eba0cb94",
|
| 32 |
+
"language": "Python",
|
| 33 |
+
"lines": 337,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 13743
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "pipeline_03_ambient_noise.py",
|
| 40 |
+
"sha256": "fc9e191617a98ec4493523b1940d6230166d38ab718db0fd91aa956829b1fd84",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 234,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 12881
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "pipeline_04_pp_noise.py",
|
| 49 |
+
"sha256": "a68edca700ed3aa475ef89b90c39aa44266fb3f481b548e63dff74375f737222",
|
| 50 |
+
"language": "Python",
|
| 51 |
+
"lines": 103,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 10323
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "pipeline_05_ica_inspection.py",
|
| 58 |
+
"sha256": "fb9ab448215b09fbc6be6fcf64dc3d060611737d6266a1fcb6c9ec3890f04f02",
|
| 59 |
+
"language": "Python",
|
| 60 |
+
"lines": 128,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 10362
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "pipeline_06_behaviour.py",
|
| 67 |
+
"sha256": "eed1739c6002d70efa44e7dc1aa4d70baced06e7ad862625d68f2da40ae54617",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 121,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 10913
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "pipeline_07_epoch.py",
|
| 76 |
+
"sha256": "2f65e08222ae779127ce81f54a0a1cbc844438d74f45d978f37f8dc4d6827f52",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 170,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 11849
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "pipeline_08_epoch_qc.py",
|
| 85 |
+
"sha256": "e05781db037d44efb59b50bb2721f01eb561998bd672c61f8e726bbae7b43c1a",
|
| 86 |
+
"language": "Python",
|
| 87 |
+
"lines": 125,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 11251
|
| 91 |
+
},
|
| 92 |
+
{
|
| 93 |
+
"path": "pipeline_10_spm_conversion.py",
|
| 94 |
+
"sha256": "883f806e207318985e093119c3943670e111719e71e990de51ff68a603214586",
|
| 95 |
+
"language": "Python",
|
| 96 |
+
"lines": 86,
|
| 97 |
+
"truncated": false,
|
| 98 |
+
"block": 19,
|
| 99 |
+
"row": 10133
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"path": "pipeline_11_process_surfaces.py",
|
| 103 |
+
"sha256": "c774de0ca01ea20c75c371dc20d01d0c65a40dabc21c079ff6a6376014cdea6c",
|
| 104 |
+
"language": "Python",
|
| 105 |
+
"lines": 43,
|
| 106 |
+
"truncated": false,
|
| 107 |
+
"block": 19,
|
| 108 |
+
"row": 9291
|
| 109 |
+
},
|
| 110 |
+
{
|
| 111 |
+
"path": "plot_motor_epoch_01_mf_5.0mm.ipynb",
|
| 112 |
+
"sha256": "e077b7990d5d1457a646685411e3ebedeac6a9fe68b685dc60dbb291db905309",
|
| 113 |
+
"language": "Jupyter",
|
| 114 |
+
"lines": 680,
|
| 115 |
+
"truncated": false,
|
| 116 |
+
"block": 19,
|
| 117 |
+
"row": 4105
|
| 118 |
+
},
|
| 119 |
+
{
|
| 120 |
+
"path": "plot_motor_epoch_02_mefI_5.0mm.ipynb",
|
| 121 |
+
"sha256": "b11fe939a0d814f59764592d96c0ba16642fee2097b22b2df00afab1bc2b2608",
|
| 122 |
+
"language": "Jupyter",
|
| 123 |
+
"lines": 677,
|
| 124 |
+
"truncated": false,
|
| 125 |
+
"block": 19,
|
| 126 |
+
"row": 4103
|
| 127 |
+
},
|
| 128 |
+
{
|
| 129 |
+
"path": "read_json_file.m",
|
| 130 |
+
"sha256": "66032c9521a8d37123336e3549f203e9ed6ccc9053f601aeb88648d244778dcd",
|
| 131 |
+
"language": "MATLAB",
|
| 132 |
+
"lines": 33,
|
| 133 |
+
"truncated": false,
|
| 134 |
+
"block": 19,
|
| 135 |
+
"row": 4858
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"path": "run_motor_epoch_01_mf.py",
|
| 139 |
+
"sha256": "f8909edbb82f8f2b6027a124e6a283158c86548fdb5ba8c31d3519c688ddee70",
|
| 140 |
+
"language": "Python",
|
| 141 |
+
"lines": 390,
|
| 142 |
+
"truncated": false,
|
| 143 |
+
"block": 19,
|
| 144 |
+
"row": 13819
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"path": "run_motor_epoch_02_mefI.py",
|
| 148 |
+
"sha256": "3f50c1ad3efe134955cb81fd9426a22eecebc438784de6348d31dbd8e4bff181",
|
| 149 |
+
"language": "Python",
|
| 150 |
+
"lines": 388,
|
| 151 |
+
"truncated": false,
|
| 152 |
+
"block": 19,
|
| 153 |
+
"row": 13785
|
| 154 |
+
},
|
| 155 |
+
{
|
| 156 |
+
"path": "utilities/files.py",
|
| 157 |
+
"sha256": "07824c7d44fe37d1fc5504e88bab3f6785f62820b55dbec0f50fff8203d73ea7",
|
| 158 |
+
"language": "Python",
|
| 159 |
+
"lines": 80,
|
| 160 |
+
"truncated": false,
|
| 161 |
+
"block": 19,
|
| 162 |
+
"row": 9936
|
| 163 |
+
},
|
| 164 |
+
{
|
| 165 |
+
"path": "utilities/tools.py",
|
| 166 |
+
"sha256": "b5ead6afc878966a779083b154fce77b93ae3c2e1853f3790892649470e3d48f",
|
| 167 |
+
"language": "Python",
|
| 168 |
+
"lines": 47,
|
| 169 |
+
"truncated": false,
|
| 170 |
+
"block": 19,
|
| 171 |
+
"row": 9322
|
| 172 |
+
},
|
| 173 |
+
{
|
| 174 |
+
"path": "utilities/utils.py",
|
| 175 |
+
"sha256": "407130f7ab6d948e7bd3bc5be26f34b7142f2305099276518a924a945e350844",
|
| 176 |
+
"language": "Python",
|
| 177 |
+
"lines": 269,
|
| 178 |
+
"truncated": false,
|
| 179 |
+
"block": 19,
|
| 180 |
+
"row": 13156
|
| 181 |
+
}
|
| 182 |
+
]
|
| 183 |
+
}
|
manifests/28/github.com__tinayiluo0322__ad-dfc-signatures.json
ADDED
|
@@ -0,0 +1,93 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "github.com/tinayiluo0322/ad-dfc-signatures",
|
| 4 |
+
"url": "https://github.com/tinayiluo0322/ad-dfc-signatures",
|
| 5 |
+
"host": "github.com",
|
| 6 |
+
"commit": "9c2097d14e0d9fe60321cd4af47ef11ca377c03b",
|
| 7 |
+
"license": "MIT",
|
| 8 |
+
"license_confirmed_by": "license file LICENSE",
|
| 9 |
+
"redistribution": "yes",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "ConnectivityPipeline/extract_distance.py",
|
| 13 |
+
"sha256": "a0a53680fd6fa689b8cca828f96eed91a88b746c02ee599c75a80259aabf4522",
|
| 14 |
+
"language": "Python",
|
| 15 |
+
"lines": 785,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 14276
|
| 19 |
+
},
|
| 20 |
+
{
|
| 21 |
+
"path": "ConnectivityPipeline/process_sliding_window.py",
|
| 22 |
+
"sha256": "5ecb5abc079af2f75e6c613f44f146590027e33b226d09bb06db53bb5f878c92",
|
| 23 |
+
"language": "Python",
|
| 24 |
+
"lines": 500,
|
| 25 |
+
"truncated": false,
|
| 26 |
+
"block": 19,
|
| 27 |
+
"row": 13890
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"path": "Data-Preprocessing/fmriprep_simg.sh",
|
| 31 |
+
"sha256": "3239e3250aeddd548e15fad5af834c7a1827f273406f7cb020d112f3af0fb941",
|
| 32 |
+
"language": "Shell",
|
| 33 |
+
"lines": 8,
|
| 34 |
+
"truncated": false,
|
| 35 |
+
"block": 19,
|
| 36 |
+
"row": 15257
|
| 37 |
+
},
|
| 38 |
+
{
|
| 39 |
+
"path": "Data-Preprocessing/generate_conn_matrices.py",
|
| 40 |
+
"sha256": "7e4460710134384ceadf84ae7e6b3d01f00995877ae7f56fdb5830c636c305ec",
|
| 41 |
+
"language": "Python",
|
| 42 |
+
"lines": 159,
|
| 43 |
+
"truncated": false,
|
| 44 |
+
"block": 19,
|
| 45 |
+
"row": 12273
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"path": "Data-Preprocessing/process_raw.sh",
|
| 49 |
+
"sha256": "97ce94194a5c260e0aae290a35edcab41d10b563b85f9b02e8595d3566781291",
|
| 50 |
+
"language": "Shell",
|
| 51 |
+
"lines": 40,
|
| 52 |
+
"truncated": false,
|
| 53 |
+
"block": 19,
|
| 54 |
+
"row": 15617
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"path": "LICENSE",
|
| 58 |
+
"sha256": "74dac7758553ced5e3bc0749ae3171c408be6d56bc5b86f99182fb8e574601e5",
|
| 59 |
+
"language": "License",
|
| 60 |
+
"lines": 21,
|
| 61 |
+
"truncated": false,
|
| 62 |
+
"block": 19,
|
| 63 |
+
"row": 4260
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"path": "PermutationTest/oasis_5peak_permutation.py",
|
| 67 |
+
"sha256": "28068cbe42c2bd7b71c4774add95938345e954a0ffd6b583a8fe8f70ab3b954b",
|
| 68 |
+
"language": "Python",
|
| 69 |
+
"lines": 380,
|
| 70 |
+
"truncated": false,
|
| 71 |
+
"block": 19,
|
| 72 |
+
"row": 13912
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"path": "PermutationTest/oasis_mean_permutation.py",
|
| 76 |
+
"sha256": "31713ffc053fe824aab9eac5d38adba2c7616667dfdb680c6f8ab421eec70897",
|
| 77 |
+
"language": "Python",
|
| 78 |
+
"lines": 379,
|
| 79 |
+
"truncated": false,
|
| 80 |
+
"block": 19,
|
| 81 |
+
"row": 13902
|
| 82 |
+
},
|
| 83 |
+
{
|
| 84 |
+
"path": "README.md",
|
| 85 |
+
"sha256": "772e403c35d3133d46dcf434cb16b57babb4624426d46cf4f626031ea7fa2d9f",
|
| 86 |
+
"language": "Text",
|
| 87 |
+
"lines": 100,
|
| 88 |
+
"truncated": false,
|
| 89 |
+
"block": 19,
|
| 90 |
+
"row": 16095
|
| 91 |
+
}
|
| 92 |
+
]
|
| 93 |
+
}
|
manifests/28/zenodo__14860402.json
ADDED
|
@@ -0,0 +1,21 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"format": "oscr-script-manifest/1",
|
| 3 |
+
"repository": "zenodo:14860402",
|
| 4 |
+
"url": "https://zenodo.org/records/14860402",
|
| 5 |
+
"host": "zenodo.org",
|
| 6 |
+
"commit": "",
|
| 7 |
+
"license": "CC-BY-NC-ND-4.0",
|
| 8 |
+
"license_confirmed_by": "license of the archive's record",
|
| 9 |
+
"redistribution": "with_conditions",
|
| 10 |
+
"files": [
|
| 11 |
+
{
|
| 12 |
+
"path": "EcoEvoHippo_code_Repository.R",
|
| 13 |
+
"sha256": "de5654531cec8e3c33f2b19542138b3b9dc0129d758483c257e24a543e34b01f",
|
| 14 |
+
"language": "R",
|
| 15 |
+
"lines": 3492,
|
| 16 |
+
"truncated": false,
|
| 17 |
+
"block": 19,
|
| 18 |
+
"row": 15219
|
| 19 |
+
}
|
| 20 |
+
]
|
| 21 |
+
}
|