{
 "format": "oscr-script-manifest/1",
 "repository": "github.com/epigenomicscode/adversarial_observation",
 "url": "https://github.com/EpiGenomicsCode/Adversarial_Observation",
 "host": "github.com",
 "commit": "7b41f4faff153dcfb292dd1d8583c29fe7ebfa3c",
 "license": "MIT",
 "license_confirmed_by": "license file LICENSE.txt",
 "redistribution": "yes",
 "files": [
  {
   "path": "Adversarial_Observation/Attacks.py",
   "sha256": "b8708894b55a00d5182a60ce1e31a5f05d5096917ecba6d5c14ee1d55970bfc4",
   "language": "Python",
   "lines": 226,
   "truncated": false,
   "block": 20,
   "row": 19904
  },
  {
   "path": "Adversarial_Observation/BirdParticle.py",
   "sha256": "8d35b16ab69016a07c49de03a153c790c1b455357b04b720226967ca908f3eaa",
   "language": "Python",
   "lines": 91,
   "truncated": false,
   "block": 20,
   "row": 16852
  },
  {
   "path": "Adversarial_Observation/Swarm.py",
   "sha256": "87ee0058c6ee834f064ee6454665a95afe30f17a0c3239878b2e90b0cc1e5985",
   "language": "Python",
   "lines": 127,
   "truncated": false,
   "block": 20,
   "row": 17955
  },
  {
   "path": "Adversarial_Observation/__init__.py",
   "sha256": "c4b8020a5875c21c0447e79c49e7708fda79024166f6ce3b7939cbc8e5bee48e",
   "language": "Python",
   "lines": 6,
   "truncated": false,
   "block": 20,
   "row": 12479
  },
  {
   "path": "Adversarial_Observation/utils.py",
   "sha256": "ea68b4946da3f1c7e4c8954eff97de480ffb2260d322b7ed269a7c292d80b150",
   "language": "Python",
   "lines": 181,
   "truncated": false,
   "block": 20,
   "row": 18956
  },
  {
   "path": "Adversarial_Observation/visualize.py",
   "sha256": "61bc7301a887814893e8b2bb968be065c47e3b72f125646a64722dad3f30ab3b",
   "language": "Python",
   "lines": 18,
   "truncated": false,
   "block": 20,
   "row": 13399
  },
  {
   "path": "LICENSE.txt",
   "sha256": "f88871912f2b80eaa0c842b53b557446b2ccdae63ec526099858ff4ad5e4fa59",
   "language": "License",
   "lines": 21,
   "truncated": false,
   "block": 20,
   "row": 8687
  },
  {
   "path": "README.md",
   "sha256": "2c0b42e2506a5b044e172cb72993d4ed26a9339217d302080bad48d6e43a3c66",
   "language": "Text",
   "lines": 249,
   "truncated": false,
   "block": 21,
   "row": 3223
  },
  {
   "path": "docs/conf.py",
   "sha256": "90d05c70edd9bd43d2e9fce222985e2b730ef8cfc7e65044aa69ea845acd9408",
   "language": "Python",
   "lines": 64,
   "truncated": false,
   "block": 20,
   "row": 16148
  },
  {
   "path": "docs/run.sh",
   "sha256": "d26e28ea14861101f0c2a8fe9b2a8356d54c0cb88aa4b0062f76b349d7dee712",
   "language": "Shell",
   "lines": 8,
   "truncated": false,
   "block": 21,
   "row": 1767
  },
  {
   "path": "manuscripts/PEARC24/MNIST/1_build_train.py",
   "sha256": "82ac77d266cf8de5f2a2d1be3aedd23c4ebc90657b2c8e159a9c634b3c8b6a57",
   "language": "Python",
   "lines": 88,
   "truncated": false,
   "block": 20,
   "row": 16615
  },
  {
   "path": "manuscripts/PEARC24/MNIST/2_adversarial_attack.py",
   "sha256": "37eff995814a93afa68f55bb0c4696c7c4469be68a6266af41cae3fd0678514b",
   "language": "Python",
   "lines": 101,
   "truncated": false,
   "block": 20,
   "row": 17778
  },
  {
   "path": "manuscripts/PEARC24/MNIST/3_create_APSO.py",
   "sha256": "45d6c9aca1bd49006ad424c4533f973941762cb46d96bd0b07872d56aa621c2d",
   "language": "Python",
   "lines": 230,
   "truncated": false,
   "block": 20,
   "row": 19781
  },
  {
   "path": "manuscripts/PEARC24/MNIST/3p1_APSO_W_Anchor.py",
   "sha256": "45c8e75779d70fba1d9383e9b272869b3ec14c2ddb592ed3b6b1579e4c8c197c",
   "language": "Python",
   "lines": 177,
   "truncated": false,
   "block": 20,
   "row": 18590
  },
  {
   "path": "manuscripts/PEARC24/MNIST/4_analyze_APSO.py",
   "sha256": "68c052348a14ed69ba21e8e34294e689f179ea84b28ba0997cfb7fac272cf95f",
   "language": "Python",
   "lines": 53,
   "truncated": false,
   "block": 20,
   "row": 15009
  },
  {
   "path": "manuscripts/PEARC24/MNIST/5_create_SHAP.py",
   "sha256": "72686086a35ee58a1ddd530d50d1c1bf6fa3275b65784eac0649bcce9e19561a",
   "language": "Python",
   "lines": 122,
   "truncated": false,
   "block": 20,
   "row": 17752
  },
  {
   "path": "manuscripts/Poison26/00_train_models.sh",
   "sha256": "58b1e5530f7dac8efe46a9aa61bed890d7e8238efe7fd8f23248c4fe9cb43861",
   "language": "Shell",
   "lines": 156,
   "truncated": false,
   "block": 21,
   "row": 2773
  },
  {
   "path": "manuscripts/Poison26/01_generate_attack_labels.sh",
   "sha256": "042a83dafb8aa10ac3fbd40e205c392ae1709674e1a7ab3af274daea2e541c2f",
   "language": "Shell",
   "lines": 51,
   "truncated": false,
   "block": 21,
   "row": 2429
  },
  {
   "path": "manuscripts/Poison26/05_calculate_FirstPass_Stats.sh",
   "sha256": "b49510af9c4f03e413f95243bd83e99525b58aaf05c68a49fc8f434be1ad28e3",
   "language": "Shell",
   "lines": 49,
   "truncated": false,
   "block": 21,
   "row": 2405
  },
  {
   "path": "manuscripts/Poison26/06_calculate_model_Scores.sh",
   "sha256": "f9faafbc660c94a37bc5006489eae86b3408b6b9c66658785ca21beae78a395c",
   "language": "Shell",
   "lines": 59,
   "truncated": false,
   "block": 21,
   "row": 2469
  },
  {
   "path": "manuscripts/Poison26/07_calculate_model_stats.sh",
   "sha256": "6a32c54e41bee086fa84909072b7511f17be44778955d23d230bd492d214e7ea",
   "language": "Shell",
   "lines": 30,
   "truncated": false,
   "block": 21,
   "row": 2287
  },
  {
   "path": "manuscripts/Poison26/bin/attack/MobileNet.py",
   "sha256": "b90274aabeff0662c1c670ba266f49ab7309de9c4c59348cb9980f2e187d0a36",
   "language": "Python",
   "lines": 121,
   "truncated": false,
   "block": 20,
   "row": 17612
  },
  {
   "path": "manuscripts/Poison26/bin/attack/RegNetX.py",
   "sha256": "619dbf2caa34719e4a5dfc48983380ce0fc29c01101d6a21dfa856d27b69af90",
   "language": "Python",
   "lines": 140,
   "truncated": false,
   "block": 20,
   "row": 18365
  },
  {
   "path": "manuscripts/Poison26/bin/attack/poison_CIFAR10.py",
   "sha256": "63523ed9b0f93ea330e1472905f54789965600985bf664cd5721b63c7e251ab3",
   "language": "Python",
   "lines": 531,
   "truncated": false,
   "block": 20,
   "row": 21786
  },
  {
   "path": "manuscripts/Poison26/bin/attack/poison_MNIST.py",
   "sha256": "2c0aff950639973885633c4936897f687f60476d63c18cca46c7088af2749ef2",
   "language": "Python",
   "lines": 469,
   "truncated": false,
   "block": 20,
   "row": 21639
  },
  {
   "path": "manuscripts/Poison26/bin/attack/poison_audioMNIST.py",
   "sha256": "12f1685b26d41488a52c3f89885048903b4c18b8767fde223fc4ee4c8985534d",
   "language": "Python",
   "lines": 615,
   "truncated": false,
   "block": 20,
   "row": 21884
  },
  {
   "path": "manuscripts/Poison26/bin/chart/generate_cross-label_violin_plot.py",
   "sha256": "d9de02252b793d2ad3afdb8495f42baa7b44cb0c63f9359dde7f4473b9769f5e",
   "language": "Python",
   "lines": 131,
   "truncated": false,
   "block": 20,
   "row": 17578
  },
  {
   "path": "manuscripts/Poison26/bin/chart/generate_cross-model_violin_plot.py",
   "sha256": "f47d0ce857e393104ffc2602fc17017a8bf3a3b9be0a05726592530eb6431c4c",
   "language": "Python",
   "lines": 80,
   "truncated": false,
   "block": 20,
   "row": 16776
  },
  {
   "path": "manuscripts/Poison26/bin/chart/plot_barChart_by_trueLabel.py",
   "sha256": "06860180f3e205882c17e07184978d6291ec2e0b9f9682a3babf5b42a314daba",
   "language": "Python",
   "lines": 69,
   "truncated": false,
   "block": 20,
   "row": 16002
  },
  {
   "path": "manuscripts/Poison26/bin/count_success.py",
   "sha256": "a1411fd7135235f982e0c9ace3c717baaa56500d2c31aa947d705a13d7566d02",
   "language": "Python",
   "lines": 59,
   "truncated": false,
   "block": 20,
   "row": 16278
  },
  {
   "path": "manuscripts/Poison26/bin/eval/build_model_stats_table.py",
   "sha256": "65a8d8653762583bfbbddbe07894038d8fd662eb2591f54b42dd1b3a27fd0d36",
   "language": "Python",
   "lines": 119,
   "truncated": false,
   "block": 20,
   "row": 17956
  },
  {
   "path": "manuscripts/Poison26/bin/eval/compute_model_stats.py",
   "sha256": "77bf606ab818e38259a1d486e0682d1733c5b6a60f02b3d72a3dcaa68e3cc5e7",
   "language": "Python",
   "lines": 555,
   "truncated": false,
   "block": 20,
   "row": 21690
  },
  {
   "path": "manuscripts/Poison26/bin/eval/convert_results.py",
   "sha256": "dc1ff66080f050bee8ff891fe1c840a7966326289c874df8199117b4970f4744",
   "language": "Python",
   "lines": 30,
   "truncated": false,
   "block": 20,
   "row": 14041
  },
  {
   "path": "manuscripts/Poison26/bin/eval/count_success.py",
   "sha256": "1fb176b58c01d2b7e67aff50bb8f2d2537e3b4c0ec166ff967a282699d746970",
   "language": "Python",
   "lines": 58,
   "truncated": false,
   "block": 20,
   "row": 16094
  },
  {
   "path": "manuscripts/Poison26/bin/eval/evaluate_poisoning.py",
   "sha256": "6a46db2a7ddae0948d26b0ff2458f5ed4762c27ba06030ca48a0d5996fd888f7",
   "language": "Python",
   "lines": 85,
   "truncated": false,
   "block": 20,
   "row": 16972
  },
  {
   "path": "manuscripts/Poison26/bin/infer/merge_MNIST-CSV.py",
   "sha256": "87e4eb5dab94f2384d53536dedd67e44034c87cb6e16ff22349bc00aae1651e0",
   "language": "Python",
   "lines": 50,
   "truncated": false,
   "block": 20,
   "row": 15420
  },
  {
   "path": "manuscripts/Poison26/bin/train/AUDIOMNIST/DynamicLSTM.py",
   "sha256": "90a1cc78e9ce5fbc4178f31d3c9792b5d777c68317a0fd2d118a76dcccb295ae",
   "language": "Python",
   "lines": 86,
   "truncated": false,
   "block": 20,
   "row": 16869
  },
  {
   "path": "manuscripts/Poison26/bin/train/AUDIOMNIST/HybridViT.py",
   "sha256": "2d2a8f274918a06ddabd0f3c03a5d7bc4656cb6d8168f01a817a1a46d189788f",
   "language": "Python",
   "lines": 115,
   "truncated": false,
   "block": 20,
   "row": 17550
  },
  {
   "path": "manuscripts/Poison26/bin/train/AUDIOMNIST/MobileNet.py",
   "sha256": "b90274aabeff0662c1c670ba266f49ab7309de9c4c59348cb9980f2e187d0a36",
   "language": "Python",
   "lines": 121,
   "truncated": false,
   "block": 20,
   "row": 17612
  },
  {
   "path": "manuscripts/Poison26/bin/train/AUDIOMNIST/RegNetX.py",
   "sha256": "619dbf2caa34719e4a5dfc48983380ce0fc29c01101d6a21dfa856d27b69af90",
   "language": "Python",
   "lines": 140,
   "truncated": false,
   "block": 20,
   "row": 18365
  },
  {
   "path": "manuscripts/Poison26/bin/train/AUDIOMNIST/train_AUDIOMNIST.py",
   "sha256": "0ce23a044f4cdf3c95c5046d997c4ac7506da9e33fd352f634e90998c81ba3f2",
   "language": "Python",
   "lines": 490,
   "truncated": false,
   "block": 20,
   "row": 21558
  },
  {
   "path": "manuscripts/Poison26/bin/train/AUDIOMNIST/train_AUDIOMNIST_DynamicLSTM.py",
   "sha256": "9e839d17665909996230c6e575c0d3848cecf3a06251e80cc57ab62fe4101aca",
   "language": "Python",
   "lines": 450,
   "truncated": false,
   "block": 20,
   "row": 21437
  },
  {
   "path": "manuscripts/Poison26/bin/train/AUDIOMNIST/train_AUDIOMNIST_HybridViT.py",
   "sha256": "d4ca39bf23d55bc39a4df0e7801723acb700a62f0c1a95df1f92697d10d5c294",
   "language": "Python",
   "lines": 450,
   "truncated": false,
   "block": 20,
   "row": 21434
  },
  {
   "path": "manuscripts/Poison26/bin/train/AUDIOMNIST/train_AUDIOMNIST_MobileNet.py",
   "sha256": "7cb938d4122c35d20f68fba952ebb171810965caeac3543a04c26c1feb22c790",
   "language": "Python",
   "lines": 450,
   "truncated": false,
   "block": 20,
   "row": 21433
  },
  {
   "path": "manuscripts/Poison26/bin/train/AUDIOMNIST/train_AUDIOMNIST_RegNetX.py",
   "sha256": "70f949f2a4ce8274837f448dffdbf2f3ac13326336c1f477c32b90ece22b052a",
   "language": "Python",
   "lines": 450,
   "truncated": false,
   "block": 20,
   "row": 21436
  },
  {
   "path": "manuscripts/Poison26/bin/train/CIFAR10/MobileNet.py",
   "sha256": "b90274aabeff0662c1c670ba266f49ab7309de9c4c59348cb9980f2e187d0a36",
   "language": "Python",
   "lines": 121,
   "truncated": false,
   "block": 20,
   "row": 17612
  },
  {
   "path": "manuscripts/Poison26/bin/train/CIFAR10/RegNetX.py",
   "sha256": "619dbf2caa34719e4a5dfc48983380ce0fc29c01101d6a21dfa856d27b69af90",
   "language": "Python",
   "lines": 140,
   "truncated": false,
   "block": 20,
   "row": 18365
  },
  {
   "path": "manuscripts/Poison26/bin/train/CIFAR10/train_CIFAR10.py",
   "sha256": "8801dbf2caae05b54044995393357e13064fb31b9bdbc7e2119a0d6a62ac892a",
   "language": "Python",
   "lines": 339,
   "truncated": false,
   "block": 20,
   "row": 20795
  },
  {
   "path": "manuscripts/Poison26/bin/train/CIFAR10/train_CIFAR10_MobileNet.py",
   "sha256": "00d6b5e14b594aa6521b41110ce930ba95ee93633204078842406e25bba99060",
   "language": "Python",
   "lines": 270,
   "truncated": false,
   "block": 20,
   "row": 20233
  },
  {
   "path": "manuscripts/Poison26/bin/train/CIFAR10/train_CIFAR10_RegNetX.py",
   "sha256": "122b509dc8b8f6802f9f3c2300358c6e536e2bceca030c594d22a9bc8ff7c511",
   "language": "Python",
   "lines": 270,
   "truncated": false,
   "block": 20,
   "row": 20234
  },
  {
   "path": "manuscripts/Poison26/bin/train/MNIST/MobileNet.py",
   "sha256": "b90274aabeff0662c1c670ba266f49ab7309de9c4c59348cb9980f2e187d0a36",
   "language": "Python",
   "lines": 121,
   "truncated": false,
   "block": 20,
   "row": 17612
  },
  {
   "path": "manuscripts/Poison26/bin/train/MNIST/RegNetX.py",
   "sha256": "619dbf2caa34719e4a5dfc48983380ce0fc29c01101d6a21dfa856d27b69af90",
   "language": "Python",
   "lines": 140,
   "truncated": false,
   "block": 20,
   "row": 18365
  },
  {
   "path": "manuscripts/Poison26/bin/train/MNIST/train_MNIST.py",
   "sha256": "becd7d2a1851e6a00feba7fd29f5d31c8fe1998fe1ec061631a126bb3288cf73",
   "language": "Python",
   "lines": 333,
   "truncated": false,
   "block": 20,
   "row": 20742
  },
  {
   "path": "manuscripts/Poison26/bin/train/MNIST/train_MNIST_MobileNet.py",
   "sha256": "c3145491af6ec92326aa1e9abc30c1d9e454cf0f2e871d823445e48add5ee1a1",
   "language": "Python",
   "lines": 271,
   "truncated": false,
   "block": 20,
   "row": 20246
  },
  {
   "path": "manuscripts/Poison26/bin/train/MNIST/train_MNIST_RegNetX.py",
   "sha256": "c11c69300624049f7c1a3f22cb7e6fc99ff060d8aa61b4dcca3d6c5096c47483",
   "language": "Python",
   "lines": 271,
   "truncated": false,
   "block": 20,
   "row": 20247
  },
  {
   "path": "manuscripts/Poison26/bin/utils/evaluate_Model.py",
   "sha256": "19b7fbc59d9bc92cffa71dc61d770e3fc94d29f18b9e6fd411a3ac5e2b739351",
   "language": "Python",
   "lines": 269,
   "truncated": false,
   "block": 20,
   "row": 20057
  },
  {
   "path": "manuscripts/Poison26/bin/utils/evaluate_audioModel.py",
   "sha256": "930b170d9216293920cb8605e5693678d3e8f88606571c4e7a72f5fb6c078ee0",
   "language": "Python",
   "lines": 253,
   "truncated": false,
   "block": 20,
   "row": 19761
  },
  {
   "path": "manuscripts/Poison26/bin/utils/generate_FalseLabels.py",
   "sha256": "8b408d7f1a70f7d4c68c22f163f940d6ae8ef51a7d7c9cd88e8744279875e51a",
   "language": "Python",
   "lines": 37,
   "truncated": false,
   "block": 20,
   "row": 14344
  },
  {
   "path": "manuscripts/Poison26/bin/utils/output_CIFAR10_labels.py",
   "sha256": "8213d1fdd50b7dcc15fb8f688a205672b50adaae0b961f5114df34f4266734a0",
   "language": "Python",
   "lines": 61,
   "truncated": false,
   "block": 20,
   "row": 16037
  },
  {
   "path": "manuscripts/Poison26/bin/utils/output_MNIST_labels.py",
   "sha256": "262cd553524e212a0717624e80bcd87ec03d26b476bb164c2659ee54a003081c",
   "language": "Python",
   "lines": 61,
   "truncated": false,
   "block": 20,
   "row": 16070
  },
  {
   "path": "manuscripts/Poison26/bin/utils/output_audioMNIST_labels.py",
   "sha256": "bc55c412c8550b695473cb3339d2441e34f07545b0d32cccea1d16717c224bd7",
   "language": "Python",
   "lines": 44,
   "truncated": false,
   "block": 20,
   "row": 15101
  },
  {
   "path": "manuscripts/Poison26/osg/CIFAR10/apso_CIFAR10.sh",
   "sha256": "4000f43716092c5e253646da2abefaf2028ac0baf47d0e3f87b6255a5e54c665",
   "language": "Shell",
   "lines": 63,
   "truncated": false,
   "block": 21,
   "row": 2368
  },
  {
   "path": "manuscripts/Poison26/osg/CIFAR10/poison_CIFAR10.py",
   "sha256": "6c046667ccae41b02827aaa4151b6c4d3b35d6b3bdfb9decc7a782ac32ce9a0f",
   "language": "Python",
   "lines": 549,
   "truncated": false,
   "block": 20,
   "row": 21831
  },
  {
   "path": "manuscripts/Poison26/osg/MNIST/apso_MNIST.sh",
   "sha256": "31b97f35bf730f595fd243fb3751147ce6c2a5f745ed2d7647602bfd588d59c5",
   "language": "Shell",
   "lines": 59,
   "truncated": false,
   "block": 21,
   "row": 2344
  },
  {
   "path": "manuscripts/Poison26/osg/MNIST/poison_MNIST.py",
   "sha256": "16fc998904fa5f6385aa3b9ce1b788b632950acf90a5a2f1e09c469af4fe4343",
   "language": "Python",
   "lines": 469,
   "truncated": false,
   "block": 20,
   "row": 21640
  },
  {
   "path": "setup.py",
   "sha256": "f4b1b403ded83fec5eaf4b6cdd8aa9df69c34ca9664416a1ac5f2318b7c39e11",
   "language": "Python",
   "lines": 69,
   "truncated": false,
   "block": 20,
   "row": 17064
  },
  {
   "path": "tests/test_adversarial_attacks.py",
   "sha256": "174f10242458f714737058a5a49dd765f7eeea63f022fdc12ed901b126238ed5",
   "language": "Python",
   "lines": 61,
   "truncated": false,
   "block": 20,
   "row": 15770
  },
  {
   "path": "tests/test_apso_singularity.py",
   "sha256": "757e69a1af34ea38aeac69bdbe93030d273dd1a93662f3ed10ae63e8b9a217df",
   "language": "Python",
   "lines": 96,
   "truncated": false,
   "block": 20,
   "row": 16275
  },
  {
   "path": "tests/test_bird_particle.py",
   "sha256": "51f8f4da85043b425cb8f12f7accf913ec691ff9a3e3d56d2ce796e163298603",
   "language": "Python",
   "lines": 44,
   "truncated": false,
   "block": 20,
   "row": 14983
  },
  {
   "path": "tests/test_model_data.py",
   "sha256": "5816c4a6e6eedc46ea3369bcd5f066c65c6d97349cdf786d424a58e92d979278",
   "language": "Python",
   "lines": 26,
   "truncated": false,
   "block": 20,
   "row": 14135
  },
  {
   "path": "tests/test_pso_optimization.py",
   "sha256": "edfc062bee55d404abdfd4e37928a0e37d3547d48b65519314362e5391072bde",
   "language": "Python",
   "lines": 68,
   "truncated": false,
   "block": 20,
   "row": 15749
  }
 ]
}