{
 "format": "oscr-script-manifest/1",
 "repository": "github.com/marcustriplett/circuitmap",
 "url": "https://github.com/marcustriplett/circuitmap",
 "host": "github.com",
 "commit": "75934895f8ef02b8045ab1a8eee592a062c2489e",
 "license": "GPL-3.0",
 "license_confirmed_by": "license file LICENSE",
 "redistribution": "yes",
 "files": [
  {
   "path": "LICENSE",
   "sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",
   "language": "License",
   "lines": 674,
   "truncated": false,
   "block": 1,
   "row": 2235
  },
  {
   "path": "README.md",
   "sha256": "f6675fb3bcea03c2a7a549684143725e7e20be104a6edeaf525fea1f3151bef3",
   "language": "Text",
   "lines": 116,
   "truncated": false,
   "block": 18,
   "row": 11028
  },
  {
   "path": "circuitmap/__init__.py",
   "sha256": "eba3371dd0ce3e4dc7a18d107eb6bfa90bc15fed6636076f8d40adebed844609",
   "language": "Python",
   "lines": 3,
   "truncated": false,
   "block": 17,
   "row": 17449
  },
  {
   "path": "circuitmap/model.py",
   "sha256": "4557622fd16d8b88dfc4276ba2d603cce92fecf957cf225efd9273b24b0a3284",
   "language": "Python",
   "lines": 211,
   "truncated": false,
   "block": 17,
   "row": 28971
  },
  {
   "path": "circuitmap/neural_waveform_demixing.py",
   "sha256": "df26ea67c2af3b6b292f674e69bbd4caba70a6ba5a1312b52efa2b8cb2b998a3",
   "language": "Python",
   "lines": 348,
   "truncated": false,
   "block": 18,
   "row": 1510
  },
  {
   "path": "circuitmap/optimise/__init__.py",
   "sha256": "46bed8518bd6d9f2002909d4ddbb3dde65341cf4316717d2d2dcdfcb9710c64a",
   "language": "Python",
   "lines": 4,
   "truncated": false,
   "block": 17,
   "row": 17439
  },
  {
   "path": "circuitmap/optimise/cavi_sns.py",
   "sha256": "6d452aceb322f6a251d1f6f759ef974b50f46ad739a897c96309cdc041ec0288",
   "language": "Python",
   "lines": 243,
   "truncated": false,
   "block": 17,
   "row": 32413
  },
  {
   "path": "circuitmap/optimise/caviar.py",
   "sha256": "3a5cef9668cc4e50a64071fc8255bdca1e9e2c69d085e7c2bbdbce8abb45dc9d",
   "language": "Python",
   "lines": 318,
   "truncated": false,
   "block": 18,
   "row": 924
  },
  {
   "path": "circuitmap/optimise/cosamp.py",
   "sha256": "4d9ab100b3afdb6a85cbb50cb7a281f522be16ac06c4763a886146d0db6077ca",
   "language": "Python",
   "lines": 97,
   "truncated": false,
   "block": 17,
   "row": 23421
  },
  {
   "path": "circuitmap/optimise/experimental/mbcs_spike_weighted_var_with_outliers_ARD.py",
   "sha256": "03ddc5017f4ba70f2f6a9447b84c8ea23b7f43b14595792e2424b6464c0ba8b2",
   "language": "Python",
   "lines": 572,
   "truncated": false,
   "block": 18,
   "row": 3508
  },
  {
   "path": "circuitmap/optimise/mbcs.py",
   "sha256": "b4ebef6725ec7535e3747e8c49604a17c889f66ff15be7cdc7496e52756fd5c4",
   "language": "Python",
   "lines": 505,
   "truncated": false,
   "block": 18,
   "row": 2978
  },
  {
   "path": "circuitmap/optimise/pava.py",
   "sha256": "44cc5820633167c4c05d6503cb145863ed14d554dd1655be72176234ab382511",
   "language": "Python",
   "lines": 88,
   "truncated": false,
   "block": 17,
   "row": 22938
  },
  {
   "path": "circuitmap/optimise/utils.py",
   "sha256": "3bfa88c7a0e4fa186321196bee59d273873e7cf1cddc8f2d00057cea0112d209",
   "language": "Python",
   "lines": 11,
   "truncated": false,
   "block": 17,
   "row": 18226
  },
  {
   "path": "circuitmap/simulation.py",
   "sha256": "1f5cc6b7f0f665bcbe6cfbd3894a5d98d21c4a484f0837d318f7d38cf583db2a",
   "language": "Python",
   "lines": 486,
   "truncated": false,
   "block": 18,
   "row": 3283
  },
  {
   "path": "circuitmap/viz.py",
   "sha256": "a05c3792191771e14c9b5b32c278182322de1b0079d8738aa368dd5434dfc444",
   "language": "Python",
   "lines": 280,
   "truncated": false,
   "block": 18,
   "row": 160
  },
  {
   "path": "examples/demo_compressive_connectivity_mapping.ipynb",
   "sha256": "35f1bf318391c23a8a901758f9e29e07bb7c09a242aac3b412fa5c8fdf5477e0",
   "language": "Jupyter",
   "lines": 202,
   "truncated": false,
   "block": 17,
   "row": 6173
  },
  {
   "path": "examples/demo_experimental_data.ipynb",
   "sha256": "00b585d15cd62f8dc78d9e7166971408f0f600d891f65f2fef43496c35e4c8ba",
   "language": "Jupyter",
   "lines": 250,
   "truncated": false,
   "block": 17,
   "row": 6303
  },
  {
   "path": "examples/fit_sum_of_psc_templates.ipynb",
   "sha256": "bb2c45ddac14f878035ee5e92956bcc2ac0523e724eb0e6f4afb336fa63b5bae",
   "language": "Jupyter",
   "lines": 200,
   "truncated": false,
   "block": 17,
   "row": 6219
  },
  {
   "path": "scripts/denoise_grids.py",
   "sha256": "2e71651a5c3256b5e2da0cbbf192c51c51950a26ae3ee4338f63a16d2f367651",
   "language": "Python",
   "lines": 322,
   "truncated": false,
   "block": 18,
   "row": 298
  },
  {
   "path": "scripts/generate_loho_cv_slurm_scripts.py",
   "sha256": "7d8c3b94bff0bf094c2958a14d82b94bf85e600931360180233e34de94b4b124",
   "language": "Python",
   "lines": 124,
   "truncated": false,
   "block": 17,
   "row": 27961
  },
  {
   "path": "scripts/run_1v10_pipeline.py",
   "sha256": "0564e2646812248a6d498b4eeab750f7b57180452b01592709e7e25e7d292a11",
   "language": "Python",
   "lines": 114,
   "truncated": false,
   "block": 17,
   "row": 25930
  },
  {
   "path": "scripts/run_1v10_pipeline_reformatted.py",
   "sha256": "20e643af822cb6acd34f57fce95bd865730a590e73cb48e149f376a1e594ae1c",
   "language": "Python",
   "lines": 327,
   "truncated": false,
   "block": 18,
   "row": 1394
  },
  {
   "path": "scripts/run_circuitmap_main.py",
   "sha256": "53baa44406116734edbcf8047ee68fd43da245ce7fc64eb84fb3b00ef610a81d",
   "language": "Python",
   "lines": 63,
   "truncated": false,
   "block": 17,
   "row": 21846
  },
  {
   "path": "scripts/run_circuitmap_main.sh",
   "sha256": "dbaf1e1f521254f2306d26cfe54fd0b162a26b34f4ff38065bb3cf93087de09a",
   "language": "Shell",
   "lines": 31,
   "truncated": false,
   "block": 18,
   "row": 9451
  },
  {
   "path": "scripts/run_continuous_experiment.py",
   "sha256": "d7b5221ef73efcb0dcf562f903f01940a344da34b6fd977491487f5611d5fe47",
   "language": "Python",
   "lines": 219,
   "truncated": false,
   "block": 17,
   "row": 30743
  },
  {
   "path": "scripts/run_downsampling_experiments.py",
   "sha256": "23dbf02d3db70a3bf31e322ce24b2da3937e70d246e75f2269e86f0b1ddd35a0",
   "language": "Python",
   "lines": 97,
   "truncated": false,
   "block": 17,
   "row": 24859
  },
  {
   "path": "scripts/run_pair_patch_pipeline.py",
   "sha256": "e8a1ae4ca1ecfae67e51441cd57bb1e31b333669f5feb20dd1f9f78327a9b868",
   "language": "Python",
   "lines": 359,
   "truncated": false,
   "block": 18,
   "row": 2175
  },
  {
   "path": "scripts/run_signal_fidelity_simulations.py",
   "sha256": "afbe2af189ee973c2c2b7f87964f6e148cc35cd0e737be6d93d6a60ed112c552",
   "language": "Python",
   "lines": 57,
   "truncated": false,
   "block": 17,
   "row": 22346
  },
  {
   "path": "scripts/run_simulations.py",
   "sha256": "2d66b7e7e7fa233bba24304d6d651d2aff085b39d45f25465ecfb2e40620321b",
   "language": "Python",
   "lines": 98,
   "truncated": false,
   "block": 17,
   "row": 24332
  },
  {
   "path": "scripts/train_psc_demixer.py",
   "sha256": "71ab9ba2036aed84e8c38dd722f205516f96a1f30724c8432c92e367e88f249b",
   "language": "Python",
   "lines": 73,
   "truncated": false,
   "block": 17,
   "row": 23252
  },
  {
   "path": "setup.py",
   "sha256": "eddd5309fb4547ca40d2754fa80ccebd9141987d5f652ed7ad630c234b735ec7",
   "language": "Python",
   "lines": 19,
   "truncated": false,
   "block": 17,
   "row": 18607
  }
 ]
}