{ "format": "oscr-script-manifest/1", "repository": "github.com/flatironinstitute/caiman", "url": "https://github.com/flatironinstitute/CaImAn", "host": "github.com", "commit": "240e1f2edbaefd8e6e0311004daedf38695f49ca", "license": "GPL-2.0", "license_confirmed_by": "license file LICENSE.txt", "redistribution": "yes", "files": [ { "path": "LICENSE.txt", "sha256": "b90ed8150a6d371c84b7dbaa680cd0e9893ef7c2558765e1e00930513efcfe3b", "language": "License", "lines": 339, "truncated": false, "block": 14, "row": 17235 }, { "path": "README.md", "sha256": "2d797acb32e397a0e26bd88929c4e676abed3d9ae197fc3ed2f0813c1df2877d", "language": "Text", "lines": 191, "truncated": false, "block": 16, "row": 7686 }, { "path": "_buildhelper_cython.py", "sha256": "0a2a67ba7d0d60737013608ee0e4ac635aaee1fa4155e7f0990d3ebc6856c350", "language": "Python", "lines": 45, "truncated": false, "block": 15, "row": 9406 }, { "path": "bin/caiman_gui.py", "sha256": "fd4735723e878e35a964d12f68d45df86dc886ff46fd134fd1611d3b8e4649d4", "language": "Python", "lines": 670, "truncated": false, "block": 15, "row": 25876 }, { "path": "caiman/__init__.py", "sha256": "e2734eed2440174f3a639e9d937c9c59e74fcd449839aff507e1ed4a97f877f9", "language": "Python", "lines": 12, "truncated": false, "block": 15, "row": 6852 }, { "path": "caiman/base/movies.py", "sha256": "4fc4c2186836b68d1a8a414d98103b5b532b319d63e8717254bab276c6293bd5", "language": "Python", "lines": 2112, "truncated": false, "block": 16, "row": 1599 }, { "path": "caiman/base/rois.py", "sha256": "eaaa97c0c638c64e8f8d7af39a280e93f94e5e7de084dd723cea5f310120cfa0", "language": "Python", "lines": 1419, "truncated": false, "block": 16, "row": 1195 }, { "path": "caiman/base/timeseries.py", "sha256": "1c525a698ce6ce3f691b41e1f94e40fb55b6a8dc4316989af0a4d52c0b698f7c", "language": "Python", "lines": 408, "truncated": false, "block": 15, "row": 23972 }, { "path": "caiman/base/traces.py", "sha256": "0971980f8f59a94ad1905f10229ea9348a446199ee4f6a1b0b189bbad90e8717", "language": "Python", "lines": 133, "truncated": false, "block": 15, "row": 15378 }, { "path": "caiman/behavior/behavior.py", "sha256": "e9e0188d971fdc455bf14d7fb2729fb667e9d4594478502e8780fe9697216424", "language": "Python", "lines": 358, "truncated": false, "block": 15, "row": 22786 }, { "path": "caiman/caimanmanager.py", "sha256": "19fbf975b6151d703c83702d0b73d5f7e9e01d080c0592a33d834f0cdf3efb89", "language": "Python", "lines": 298, "truncated": false, "block": 15, "row": 23245 }, { "path": "caiman/cluster.py", "sha256": "067341021d020e826c74a32e5d036ff36351f3300db555d503d62db35560172e", "language": "Python", "lines": 267, "truncated": false, "block": 15, "row": 22519 }, { "path": "caiman/components_evaluation.py", "sha256": "982c8016a6000dc85fc6a4ebd8fe1f314c90c8a66f469fb792bd8a43f8111558", "language": "Python", "lines": 815, "truncated": false, "block": 16, "row": 525 }, { "path": "caiman/external/cell_magic_wand.py", "sha256": "add693334a7d09cc4a206751ecc8016b788f5c33b6ae383478ace1f07763b8b0", "language": "Python", "lines": 238, "truncated": false, "block": 15, "row": 21681 }, { "path": "caiman/external/houghvst/demo_VST.py", "sha256": "ecaf593ab50b5ce6227011a56b6b411abf69e08704976bfc23e31079a0245548", "language": "Python", "lines": 46, "truncated": false, "block": 15, "row": 8813 }, { "path": "caiman/external/houghvst/estimation.py", "sha256": "239e09e147b55493722de13ee56bfe70882a4804792aafd25b72546cb79dad03", "language": "Python", "lines": 106, "truncated": false, "block": 15, "row": 15045 }, { "path": "caiman/external/houghvst/gat.py", "sha256": "8e0696831569cd69645486503faf11477f046bd901c445544e0de4c0b2f0e126", "language": "Python", "lines": 70, "truncated": false, "block": 15, "row": 12103 }, { "path": "caiman/external/houghvst/measures.py", "sha256": "ae914929820d44cbdc670b29357784f254b0c12c3b0f12914391ad24812c568c", "language": "Python", "lines": 35, "truncated": false, "block": 15, "row": 8822 }, { "path": "caiman/external/houghvst/plotting.py", "sha256": "2bd964638850febce6d569053b1bd84ae212c2fd2d1f1c0ddac91891c3e83ef8", "language": "Python", "lines": 181, "truncated": false, "block": 15, "row": 18657 }, { "path": "caiman/external/houghvst/regions.py", "sha256": "5cc21776ab15bdf093cbfe64a2d49ae47d6f1024e6b6e6848acec932c6557987", "language": "Python", "lines": 59, "truncated": false, "block": 15, "row": 11487 }, { "path": "caiman/external/houghvst/stats.py", "sha256": "47613a82d13dd904c46311a4786443d4587a5277f7c1386eae28cc55262b3cb6", "language": "Python", "lines": 93, "truncated": false, "block": 15, "row": 13440 }, { "path": "caiman/keras_model_arch.py", "sha256": "c4974dd003aade5f7af771164372d979cdb712b2f36d1faaa29c72584ee2b613", "language": "Python", "lines": 74, "truncated": false, "block": 15, "row": 13607 }, { "path": "caiman/mmapping.py", "sha256": "40197f8e36d96e0a9c3a53919da815b8dbde57cb49c7d4f6a570abb5a590a76c", "language": "Python", "lines": 714, "truncated": false, "block": 16, "row": 68 }, { "path": "caiman/motion_correction.py", "sha256": "7cdb9e0d5b4704f9453f21dcda4710d545e0841a41426c7de9c8834f96bf2201", "language": "Python", "lines": 3218, "truncated": false, "block": 16, "row": 1759 }, { "path": "caiman/paths.py", "sha256": "b38a7a198d0b7fbd1666bb51be58c3dde37ad671220580954455ece4ad3e2edf", "language": "Python", "lines": 130, "truncated": false, "block": 15, "row": 18140 }, { "path": "caiman/source_extraction/cnmf/__init__.py", "sha256": "2c84531d923a20cd0291cda714a399814cba97cb65e48176d883ec9458c7fb14", "language": "Python", "lines": 15, "truncated": false, "block": 15, "row": 6450 }, { "path": "caiman/source_extraction/cnmf/cnmf.py", "sha256": "187c332f592caf6532cde38a4ff6f81009ac410c25793889a9e94b5f6d775164", "language": "Python", "lines": 862, "truncated": false, "block": 16, "row": 994 }, { "path": "caiman/source_extraction/cnmf/deconvolution.py", "sha256": "e6ddf9ec0a19353f47a251877088fb864f456f4a033e9bc0eda850337a84e322", "language": "Python", "lines": 1053, "truncated": false, "block": 16, "row": 823 }, { "path": "caiman/source_extraction/cnmf/estimates.py", "sha256": "5c1a4fa3f637b55a6ce422abae5bd28a49cdff110065617b6de30ab5a6dbefe0", "language": "Python", "lines": 1735, "truncated": false, "block": 16, "row": 1546 }, { "path": "caiman/source_extraction/cnmf/initialization.py", "sha256": "f0c56a98bdf3e78a0ea0a6351fe4f33653743dd20e23e4c1b4891f470e266006", "language": "Python", "lines": 2055, "truncated": false, "block": 16, "row": 1586 }, { "path": "caiman/source_extraction/cnmf/map_reduce.py", "sha256": "84b6b19a2a3c705c32dbfa0ee5e9b2e3aefd792f2ff53ee1ab58fe0b21bf7fbb", "language": "Python", "lines": 482, "truncated": false, "block": 15, "row": 24626 }, { "path": "caiman/source_extraction/cnmf/merging.py", "sha256": "bd07657cfd12feba1c00d620b21e369ef0e49ed5ea570ab927e259e629224f42", "language": "Python", "lines": 326, "truncated": false, "block": 15, "row": 23241 }, { "path": "caiman/source_extraction/cnmf/online_cnmf.py", "sha256": "26c006f7834d4f288d8da75f7ffe08d34f10d015db28deff1be4b2288238f5dc", "language": "Python", "lines": 2545, "truncated": false, "block": 16, "row": 1741 }, { "path": "caiman/source_extraction/cnmf/params.py", "sha256": "98fc9cc9a95e224425de40e5191c7c746db0d5e6394e22b925375b535c2aafce", "language": "Python", "lines": 1185, "truncated": false, "block": 16, "row": 1358 }, { "path": "caiman/source_extraction/cnmf/pre_processing.py", "sha256": "335d5e98c5e6e7c6c892d7cc08b7ce62ff040bf0d59f619730fd6958170b2cf4", "language": "Python", "lines": 502, "truncated": false, "block": 15, "row": 24419 }, { "path": "caiman/source_extraction/cnmf/spatial.py", "sha256": "fc3ed2dac7997f9a3fa355a9aa8436cafab38c2dc645dcd6cb9ecc4083171e7e", "language": "Python", "lines": 1132, "truncated": false, "block": 16, "row": 928 }, { "path": "caiman/source_extraction/cnmf/temporal.py", "sha256": "74b7cfe83ea1040fcd8a1493f17ed67a1ce44a79aaa57f1a6ea409bda1cadcc1", "language": "Python", "lines": 404, "truncated": false, "block": 15, "row": 23572 }, { "path": "caiman/source_extraction/cnmf/utilities.py", "sha256": "0a003a4e76c67c77506c00867c79f702bc9fea8aa435fa1a93d5dfa4cf4cdc84", "language": "Python", "lines": 1274, "truncated": false, "block": 16, "row": 1019 }, { "path": "caiman/source_extraction/volpy/atm.py", "sha256": "3d1c766d3154ef716d2b5e86e92dfc02e7bb0ad7855f956e57eca10e7f53dbcd", "language": "Python", "lines": 609, "truncated": false, "block": 15, "row": 25726 }, { "path": "caiman/source_extraction/volpy/mrcnn/__init__.py", "sha256": "2b8e605f49f3306b106a65c98609b4f9e9f9d67ee4c7397a178f3d212aee7149", "language": "Python", "lines": 7, "truncated": false, "block": 15, "row": 5887 }, { "path": "caiman/source_extraction/volpy/mrcnn/config.py", "sha256": "f594f4cd4cd656cdac1da149f73b304d60002f3576d93ac370646d497817d696", "language": "Python", "lines": 48, "truncated": false, "block": 15, "row": 9068 }, { "path": "caiman/source_extraction/volpy/mrcnn/model.py", "sha256": "23af1041f542c8fcc697f711d7d0cb30cf0eede64c66c9c478234a1de5b43ece", "language": "Python", "lines": 81, "truncated": false, "block": 15, "row": 13063 }, { "path": "caiman/source_extraction/volpy/mrcnn/mrcnn_training.ipynb", "sha256": "0b3610b09b933b56abe5288c63672054833da2baccd101e5f1f5e0a87fca043e", "language": "Jupyter", "lines": 251, "truncated": false, "block": 14, "row": 15929 }, { "path": "caiman/source_extraction/volpy/mrcnn/neurons.py", "sha256": "38dd148f8e496bce9b052bc4d4eaaf8013ebb4ffd95cacb2c65ea744f4c58a4d", "language": "Python", "lines": 396, "truncated": false, "block": 15, "row": 24509 }, { "path": "caiman/source_extraction/volpy/mrcnn/utils.py", "sha256": "c280bda7da77d6311f1f9f85f93ee3b301088fc8cf475efc4ad0825d935ac5b4", "language": "Python", "lines": 478, "truncated": false, "block": 15, "row": 24764 }, { "path": "caiman/source_extraction/volpy/mrcnn/visualize.py", "sha256": "38f591eede3f0db8f904c3b9d834ee73e0c53086f73fe14107f7a77eed283999", "language": "Python", "lines": 326, "truncated": false, "block": 15, "row": 22716 }, { "path": "caiman/source_extraction/volpy/spikepursuit.py", "sha256": "e6f5c5a471533e66b9169c5ecbfff6efa1b1e6584484d572e70cda5993d05c10", "language": "Python", "lines": 745, "truncated": false, "block": 16, "row": 275 }, { "path": "caiman/source_extraction/volpy/utils.py", "sha256": "0c73fb64e36488153c0af4d5bd26843f4bb63805d860c193b430824fe6706b2f", "language": "Python", "lines": 307, "truncated": false, "block": 15, "row": 22597 }, { "path": "caiman/source_extraction/volpy/volparams.py", "sha256": "27745e4e2b1a931b0371b7430e7a960fa6ed112dc5fc01443c2528335a6bd645", "language": "Python", "lines": 141, "truncated": false, "block": 15, "row": 20048 }, { "path": "caiman/source_extraction/volpy/volpy.py", "sha256": "a9fb4d9144d6d23765ff15504805f04725f697fd2464e912a24b0e0344d2b6a1", "language": "Python", "lines": 164, "truncated": false, "block": 15, "row": 18952 }, { "path": "caiman/source_extraction/volpy/volpy_gui.py", "sha256": "18db1c7e16e4ba8ec44acef53ec8f7c882cea66994ee0f3468d83bebbb84d69b", "language": "Python", "lines": 380, "truncated": false, "block": 15, "row": 23591 }, { "path": "caiman/summary_images.py", "sha256": "b6ce5ce0ecab74b0d748540323ce23d2dbaf977b821dae422d9cf3e7fe601813", "language": "Python", "lines": 814, "truncated": false, "block": 16, "row": 425 }, { "path": "caiman/tests/comparison/__init__.py", "sha256": "c06e356d80228b90272ef6d98b66b16dd16abaf98cf8fc9571a7610a3383ec38", "language": "Python", "lines": 4, "truncated": false, "block": 15, "row": 5896 }, { "path": "caiman/tests/comparison/comparison.py", "sha256": "4167dd05b1e57243051ee8b8cdb9b9f267dff0f5f92f6296f2abc7af47514a4e", "language": "Python", "lines": 516, "truncated": false, "block": 15, "row": 25553 }, { "path": "caiman/tests/comparison/create_gt.py", "sha256": "49bb39b7b8a81302b327f5e0ead979be06c270520bc1e0fd65f2d2429743fe94", "language": "Python", "lines": 314, "truncated": false, "block": 15, "row": 23335 }, { "path": "caiman/tests/comparison/regen_main_gt.py", "sha256": "bca33e46d4ca3eb27dbbe3ab181debd597e808d71e6e93bd366fb7ce94058330", "language": "Python", "lines": 5, "truncated": false, "block": 15, "row": 5744 }, { "path": "caiman/tests/comparison_general.py", "sha256": "2c63d998a9b08424ba70fef0b745edfeacaaac0d502cee27b42c42c4b09bc546", "language": "Python", "lines": 344, "truncated": false, "block": 15, "row": 23569 }, { "path": "caiman/tests/comparison_humans.py", "sha256": "f0d349279cfdbc63d24633d8107c4120b013943b4ef7890da944637a6a5cb937", "language": "Python", "lines": 508, "truncated": false, "block": 15, "row": 25307 }, { "path": "caiman/tests/comparison_humans_online.py", "sha256": "02dad37004e329194e781c083c7cbd5982c5b5337f002c72f45ea1301d51c10a", "language": "Python", "lines": 368, "truncated": false, "block": 15, "row": 23692 }, { "path": "caiman/tests/test_deconvolution.py", "sha256": "2f00ed1a76e10062e421c076ded28226bb5bbf5d643099545b82b1313d052aa0", "language": "Python", "lines": 76, "truncated": false, "block": 15, "row": 11829 }, { "path": "caiman/tests/test_demo.py", "sha256": "2def48803bbf451041edd945eddc3a5e5eebeb241fdc97461779060626c00eef", "language": "Python", "lines": 58, "truncated": false, "block": 15, "row": 9731 }, { "path": "caiman/tests/test_hdf5.py", "sha256": "2836213d7fe5584fd2e37de74cfe10adb724f79905f9d1a3c0e632397f40b18e", "language": "Python", "lines": 51, "truncated": false, "block": 15, "row": 10137 }, { "path": "caiman/tests/test_import.py", "sha256": "f1667a9ee6ffe5a58455a05107478edb13eb8ac7354f98051aa1834512b3f3ce", "language": "Python", "lines": 5, "truncated": false, "block": 15, "row": 5603 }, { "path": "caiman/tests/test_keras.py", "sha256": "efc0f1a8df8b00d430dc81707d8393350a74ab998779085c76fac718f89d62a3", "language": "Python", "lines": 34, "truncated": false, "block": 15, "row": 8096 }, { "path": "caiman/tests/test_memmapping.py", "sha256": "1ecda89bb27c9959fa71d25ce37dafbb8735cc1d3eecd1c1b306afa0648de7cc", "language": "Python", "lines": 73, "truncated": false, "block": 15, "row": 10057 }, { "path": "caiman/tests/test_motion_correction.py", "sha256": "eea4bf88bda4123016a45ce931d2f4c3287fd777d89d15d6c89c0aacd3c16a79", "language": "Python", "lines": 152, "truncated": false, "block": 15, "row": 18325 }, { "path": "caiman/tests/test_movies.py", "sha256": "786b7da7eaf7a78023545ac02f80bd8af87c599ec56517c5f15ef7901bd4bde8", "language": "Python", "lines": 38, "truncated": false, "block": 15, "row": 8986 }, { "path": "caiman/tests/test_mrcnn.py", "sha256": "b4d82f4498b1bff978ca1261908489185efb5497a40bfbdeceabf31de192dd59", "language": "Python", "lines": 98, "truncated": false, "block": 15, "row": 15054 }, { "path": "caiman/tests/test_onacid.py", "sha256": "54a9c44257013c7d4459a7a854d286ea75cf9fc8889c859197be0bb73a88a470", "language": "Python", "lines": 78, "truncated": false, "block": 15, "row": 13485 }, { "path": "caiman/tests/test_pytorch.py", "sha256": "290ef39c99d2a6de86afeb7348bfaaf0513e947363cb6e99e89768cc9e951ba3", "language": "Python", "lines": 52, "truncated": false, "block": 15, "row": 9495 }, { "path": "caiman/tests/test_sbx.py", "sha256": "af430df00e8371bc94e2e817137a95a5eec58f2cb0ae1bb828e9c59b96f7bb95", "language": "Python", "lines": 213, "truncated": false, "block": 15, "row": 22317 }, { "path": "caiman/tests/test_temporal.py", "sha256": "2c86a0a837634fa507135507f2f32dbd761c4c819b83f015cf7c7c6484c6f382", "language": "Python", "lines": 23, "truncated": false, "block": 15, "row": 7018 }, { "path": "caiman/tests/test_toydata.py", "sha256": "839d0900cf61c71b2c11be4030e0b1326c97ef64365c378289f56dc885b0f713", "language": "Python", "lines": 152, "truncated": false, "block": 15, "row": 18748 }, { "path": "caiman/tests/test_utilities.py", "sha256": "735c065e1335c45efce09f38beea6590119686c2b9c2a55e2ca59b1e300747e2", "language": "Python", "lines": 126, "truncated": false, "block": 15, "row": 14734 }, { "path": "caiman/utils/image_preprocessing_keras.py", "sha256": "a967037977fc1d7c56642d3b58bb41f42093ca190e3f6292f32e86dc61b4145b", "language": "Python", "lines": 1092, "truncated": false, "block": 16, "row": 1028 }, { "path": "caiman/utils/labelling.py", "sha256": "fd3f96b808a849f90a5816e86ae8f3c114851fb4083e214f919ec0e23755d0c3", "language": "Python", "lines": 69, "truncated": false, "block": 15, "row": 10911 }, { "path": "caiman/utils/nn_models.py", "sha256": "52283576ec7d6df69d3e6e27b88ae08048e39cfa3d1c072cb70690db1057c669", "language": "Python", "lines": 547, "truncated": false, "block": 15, "row": 25111 }, { "path": "caiman/utils/sbx_utils.py", "sha256": "0648c58f151a052ff9e28f67da1c5d38621b493be6b97ad6a4b6095b0a978e6d", "language": "Python", "lines": 537, "truncated": false, "block": 15, "row": 25323 }, { "path": "caiman/utils/stats.py", "sha256": "505463bacf26acaac9815df0a6e966e3287cec231d4642cad16a25e099027aca", "language": "Python", "lines": 338, "truncated": false, "block": 15, "row": 22180 }, { "path": "caiman/utils/utils.py", "sha256": "34f74705db9ccaa3dbc12d2a5a6ed7069dd5e148ece59994c563b0a22643a073", "language": "Python", "lines": 631, "truncated": false, "block": 16, "row": 27 }, { "path": "caiman/utils/visualization.py", "sha256": "104fc449f34f18ceae65b959e1c077ae600420619dec48cc656737a5a9c26f0a", "language": "Python", "lines": 1482, "truncated": false, "block": 16, "row": 1346 }, { "path": "demos/general/demo_OnACID.py", "sha256": "999de2773e4a315b589e8dc42af98c9d180e359472a311f855c0c0c6174c642b", "language": "Python", "lines": 88, "truncated": false, "block": 15, "row": 13547 }, { "path": "demos/general/demo_OnACID_mesoscope.py", "sha256": "59017abbad092d523fa0266f21ecdccce8a91ea80af268276f29de2279114d0c", "language": "Python", "lines": 138, "truncated": false, "block": 15, "row": 18221 }, { "path": "demos/general/demo_behavior.py", "sha256": "1f23d2040f6af776f9e43e0627dc6ad39e37519e030d30e1d7547d11626b780e", "language": "Python", "lines": 116, "truncated": false, "block": 15, "row": 16151 }, { "path": "demos/general/demo_caiman_basic.py", "sha256": "168c838f79c28f5ca52407b9c3ba93d6994d8a1b70d6c24efebcfb8cb91746dc", "language": "Python", "lines": 135, "truncated": false, "block": 15, "row": 17470 }, { "path": "demos/general/demo_pipeline.py", "sha256": "53fdebbc204a7106884b4014b7d1f28e097a4180cbbd8b5d884186d12f405e47", "language": "Python", "lines": 202, "truncated": false, "block": 15, "row": 20417 }, { "path": "demos/general/demo_pipeline_NWB.py", "sha256": "6eabf0427c3769548259d2d20475ec4e8899f12a5e37fb9a9cdeec6ba908efd6", "language": "Python", "lines": 250, "truncated": false, "block": 15, "row": 22447 }, { "path": "demos/general/demo_pipeline_cnmfE.py", "sha256": "ade3dfc5f155acbee9e805fe6925d417c78c91016b6ad9adab95ff44a56bbd85", "language": "Python", "lines": 154, "truncated": false, "block": 15, "row": 19634 }, { "path": "demos/general/demo_pipeline_voltage_imaging.py", "sha256": "0a727fbecd2f3a893230d28aa94353f42e77cfcfacfb46d2ad301cca1bbe763b", "language": "Python", "lines": 290, "truncated": false, "block": 15, "row": 23434 }, { "path": "demos/notebooks/demo_OnACID_mesoscope.ipynb", "sha256": "5784cc54ea02194d9247314fa64e087a18572131b3693d577e84c9dcdd34047b", "language": "Jupyter", "lines": 159, "truncated": false, "block": 14, "row": 15768 }, { "path": "demos/notebooks/demo_Ring_CNN.ipynb", "sha256": "61b05b5600224ceee8c39f3e5fe2e2c9191236cb7cd835126b8d350b6790f655", "language": "Jupyter", "lines": 387, "truncated": false, "block": 14, "row": 16324 }, { "path": "demos/notebooks/demo_VST.ipynb", "sha256": "071e1c93649644320166883dbcb44084b1126995c0b3f4ddaabb384ff36d3bc4", "language": "Jupyter", "lines": 118, "truncated": false, "block": 14, "row": 15270 }, { "path": "demos/notebooks/demo_caiman_cnmf_3D.ipynb", "sha256": "df1af1535354ed852ba925132ba665130a76a8c7eb615c6c148b58275f54bc38", "language": "Jupyter", "lines": 355, "truncated": false, "block": 14, "row": 16064 }, { "path": "demos/notebooks/demo_dendritic.ipynb", "sha256": "8d8aa97beaa5cd18394f9a301527eb1d2b60bdb4a5c4f2c3f87dbedc1b2363e5", "language": "Jupyter", "lines": 415, "truncated": false, "block": 14, "row": 16322 }, { "path": "demos/notebooks/demo_motion_correction.ipynb", "sha256": "5886c514c88e1d12ea03e6a8c9afe3741395b629713bf1d5840049271688e974", "language": "Jupyter", "lines": 292, "truncated": false, "block": 14, "row": 16200 }, { "path": "demos/notebooks/demo_multisession_registration.ipynb", "sha256": "d185f77433672835951e621492283f6b0236129a43eddc0a99779ecb245ec706", "language": "Jupyter", "lines": 96, "truncated": false, "block": 14, "row": 15534 }, { "path": "demos/notebooks/demo_online_3D.ipynb", "sha256": "a6a38350fb85fa81718fffa7db49b0db0e3176a61b31cc5904d6c392027605c0", "language": "Jupyter", "lines": 322, "truncated": false, "block": 14, "row": 15989 }, { "path": "demos/notebooks/demo_online_cnmfE.ipynb", "sha256": "78852787b2a25ee1032d86310e7607e3cdf2518b6389454eb1fdc432156024f0", "language": "Jupyter", "lines": 397, "truncated": false, "block": 14, "row": 16299 }, { "path": "demos/notebooks/demo_pipeline.ipynb", "sha256": "5ed9b7c699f5242f350b8a253e6506fe92805e31bbde64987dc2e985c21b1e12", "language": "Jupyter", "lines": 959, "truncated": false, "block": 14, "row": 16683 }, { "path": "demos/notebooks/demo_pipeline_cnmfE.ipynb", "sha256": "7f9336448ed00c3a6946f0021a78f5d8deceb9133c478c60e82f54d80bd5bbd7", "language": "Jupyter", "lines": 601, "truncated": false, "block": 14, "row": 16590 }, { "path": "demos/notebooks/demo_pipeline_voltage_imaging.ipynb", "sha256": "e8f449842a511dc7ef3558752a6c7ea4b78a594abd3d7094d690f99032e214f7", "language": "Jupyter", "lines": 298, "truncated": false, "block": 14, "row": 16075 }, { "path": "demos/notebooks/demo_realtime_cnmfE.ipynb", "sha256": "d6d15cb09dfd8871e49b863c44b0d208285e87109fb5cfc2b68946f67242c718", "language": "Jupyter", "lines": 693, "truncated": false, "block": 14, "row": 16571 }, { "path": "demos/notebooks/demo_seeded_CNMF.ipynb", "sha256": "c46b8bf1026b9758ce53e12fa903c2b00fea5eb57526c9e0de9da976e8ca6078", "language": "Jupyter", "lines": 475, "truncated": false, "block": 14, "row": 16498 }, { "path": "demos/notebooks/win.py", "sha256": "41d36f1e127ffc5546207eff56c440dc574b0926da1b3b32d9eabeb37903a737", "language": "Python", "lines": 38, "truncated": false, "block": 15, "row": 8780 }, { "path": "docs/source/conf.py", "sha256": "da75bd18839b9f23a2ee863f444da64a88b26fa1b8b15936110fc374bf965198", "language": "Python", "lines": 295, "truncated": false, "block": 15, "row": 21513 }, { "path": "nbexec.py", "sha256": "4a4db024afe3bead8d30b6dd854a084f1e75a89a84f59a11821d6e5bd6f31d0e", "language": "Python", "lines": 39, "truncated": false, "block": 15, "row": 8552 }, { "path": "pylint-all.sh", "sha256": "7e3b233164aa6f9cc374c01999db4a387b131c565b3acaabfe2b7d979dcfee11", "language": "Shell", "lines": 3, "truncated": false, "block": 16, "row": 4632 }, { "path": "setup.py", "sha256": "36bff95ab4c13d9adf3967907bce5e29f1469798e9f1c6be6290f192bf2f28fe", "language": "Python", "lines": 97, "truncated": false, "block": 15, "row": 15878 }, { "path": "test_demos.sh", "sha256": "a217057f7a806ebb7e43e34f4469f65c1b54735ad41dc6dd996e19c4e15e2e72", "language": "Shell", "lines": 77, "truncated": false, "block": 16, "row": 6188 } ] }