{
 "format": "oscr-script-manifest/1",
 "repository": "github.com/connectomicslab/connectomemapper3",
 "url": "https://github.com/connectomicslab/connectomemapper3/tree/v3.0.0-RC4",
 "host": "github.com",
 "commit": "2fde4227c63396e6c5889503dabe30b4c8a3bea1",
 "license": "BSD-3-Clause",
 "license_confirmed_by": "license file LICENSE",
 "redistribution": "yes",
 "files": [
  {
   "path": "LICENSE",
   "sha256": "7b867c24144606f6b0859d39a6d020deb6765519f985b576bc474d33fb412002",
   "language": "License",
   "lines": 28,
   "truncated": false,
   "block": 17,
   "row": 7995
  },
  {
   "path": "README.md",
   "sha256": "0596942cd8ae628deed2e78d3f9938e14fbccfed7293a6849a1063a5feb06c2b",
   "language": "Text",
   "lines": 242,
   "truncated": false,
   "block": 18,
   "row": 11228
  },
  {
   "path": "cmp/__init__.py",
   "sha256": "d2fdd35c981397f69efa138e6e2bd583e1b6b2e5e31f418b20f49582d6fedc62",
   "language": "Python",
   "lines": 7,
   "truncated": false,
   "block": 17,
   "row": 18182
  },
  {
   "path": "cmp/bidsappmanager/gui/__init__.py",
   "sha256": "26e34e4a7fe7449f168cd351cab1d68237c4995274058c11c428856b2386f08f",
   "language": "Python",
   "lines": 7,
   "truncated": false,
   "block": 17,
   "row": 18474
  },
  {
   "path": "cmp/bidsappmanager/gui/bidsapp.py",
   "sha256": "126362a70ac91c9b6c15dc65facccf4c029ff0e064237cd5a68166f62d827612",
   "language": "Python",
   "lines": 1350,
   "truncated": false,
   "block": 18,
   "row": 5379
  },
  {
   "path": "cmp/bidsappmanager/gui/config.py",
   "sha256": "f447488b67c0bc3f68f54d67c0ae28927f96f931ce34c6280f9d1ffd237d22b7",
   "language": "Python",
   "lines": 314,
   "truncated": false,
   "block": 18,
   "row": 518
  },
  {
   "path": "cmp/bidsappmanager/gui/globals.py",
   "sha256": "b4016ea9bce9f8d5002787e0b65c975e4cd8fc727739d5fdcfb0b1c6ee73ff7e",
   "language": "Python",
   "lines": 128,
   "truncated": false,
   "block": 17,
   "row": 26789
  },
  {
   "path": "cmp/bidsappmanager/gui/handlers.py",
   "sha256": "11e6c74fd555ba4ab9635839b2a5099fb5bf00c31fca018b63eb3445dbd87368",
   "language": "Python",
   "lines": 1102,
   "truncated": false,
   "block": 18,
   "row": 5265
  },
  {
   "path": "cmp/bidsappmanager/gui/principal.py",
   "sha256": "e6389434d83d91154ebc9a3dff6becb66f004538bafd8d79f94c4b2bd6189ee6",
   "language": "Python",
   "lines": 302,
   "truncated": false,
   "block": 18,
   "row": 500
  },
  {
   "path": "cmp/bidsappmanager/gui/qc.py",
   "sha256": "9495f04783d37f017fade91384b19e89ae1faa919a98663403a07751d6633a49",
   "language": "Python",
   "lines": 536,
   "truncated": false,
   "block": 18,
   "row": 3492
  },
  {
   "path": "cmp/bidsappmanager/gui/traits.py",
   "sha256": "bf10936d98d64b9e4692ede54c272f3d8b07b183b9fe9c36e2167b148ed699f3",
   "language": "Python",
   "lines": 33,
   "truncated": false,
   "block": 17,
   "row": 20927
  },
  {
   "path": "cmp/bidsappmanager/pipelines/anatomical/anatomical.py",
   "sha256": "3c68b651bc1f0f115574ade20a895cbe6b415bdf26c379c26ebe73050b7db8ac",
   "language": "Python",
   "lines": 633,
   "truncated": false,
   "block": 18,
   "row": 4045
  },
  {
   "path": "cmp/bidsappmanager/pipelines/diffusion/diffusion.py",
   "sha256": "142318e83bcf204a9c4212a772e0940445ab354f00cd3b89641ea4444db87b8c",
   "language": "Python",
   "lines": 559,
   "truncated": false,
   "block": 18,
   "row": 3469
  },
  {
   "path": "cmp/bidsappmanager/pipelines/functional/eeg.py",
   "sha256": "f088776073619fb01ef839351d17246c6b71d4788f25612ad03f545841a4003f",
   "language": "Python",
   "lines": 224,
   "truncated": false,
   "block": 17,
   "row": 31375
  },
  {
   "path": "cmp/bidsappmanager/pipelines/functional/fMRI.py",
   "sha256": "3f77a48c607981c191a1b0166de54f7d4ce538562e8574435ef05a1147cb5764",
   "language": "Python",
   "lines": 498,
   "truncated": false,
   "block": 18,
   "row": 2938
  },
  {
   "path": "cmp/bidsappmanager/project.py",
   "sha256": "2f9b0eabd0752469ceab9621742d114b8b44023c31fe223cc2d32a1ded88f432",
   "language": "Python",
   "lines": 1264,
   "truncated": false,
   "block": 18,
   "row": 5104
  },
  {
   "path": "cmp/bidsappmanager/stages/connectome/connectome.py",
   "sha256": "6d93cb944b9f2a52cf8fd61ffc4c44447e79f5f3db62ee8a38e3a4ed17544c61",
   "language": "Python",
   "lines": 206,
   "truncated": false,
   "block": 17,
   "row": 29729
  },
  {
   "path": "cmp/bidsappmanager/stages/connectome/eeg_connectome.py",
   "sha256": "e74e7f34023197646cda5e50a78478c26cdd4583c9d506df5daba3b10c6980e5",
   "language": "Python",
   "lines": 210,
   "truncated": false,
   "block": 17,
   "row": 29981
  },
  {
   "path": "cmp/bidsappmanager/stages/connectome/fmri_connectome.py",
   "sha256": "3775bc2f70ea7895f09b278db3d8430571a71a5cea200daa5c3313393e3841ff",
   "language": "Python",
   "lines": 177,
   "truncated": false,
   "block": 17,
   "row": 28681
  },
  {
   "path": "cmp/bidsappmanager/stages/diffusion/diffusion.py",
   "sha256": "916be575065707d5716c2ed40a7b290b9338f3faf2fc2d6f3a1499bf27d7df71",
   "language": "Python",
   "lines": 225,
   "truncated": false,
   "block": 17,
   "row": 31101
  },
  {
   "path": "cmp/bidsappmanager/stages/diffusion/reconstruction.py",
   "sha256": "d9ebfc7f93fbc1fdce3168134170944e6be7c13e130124cfdbba19f3ec92a657",
   "language": "Python",
   "lines": 118,
   "truncated": false,
   "block": 17,
   "row": 27099
  },
  {
   "path": "cmp/bidsappmanager/stages/diffusion/tracking.py",
   "sha256": "b8e8313b390b87c500099d917d8c77b2190721ae3c2edb00f1022137fcedc6c4",
   "language": "Python",
   "lines": 100,
   "truncated": false,
   "block": 17,
   "row": 25699
  },
  {
   "path": "cmp/bidsappmanager/stages/eeg/esi.py",
   "sha256": "cb2054c821b4fdc1c2a4e41b69631b1cee4e8347b006827e47b02d87351ee96a",
   "language": "Python",
   "lines": 207,
   "truncated": false,
   "block": 17,
   "row": 30831
  },
  {
   "path": "cmp/bidsappmanager/stages/eeg/preprocessing.py",
   "sha256": "31f2fa9b1c19311aeb69832c47f417b87c3844449959f7db70618a97036d9a04",
   "language": "Python",
   "lines": 206,
   "truncated": false,
   "block": 17,
   "row": 30815
  },
  {
   "path": "cmp/bidsappmanager/stages/functional/functionalMRI.py",
   "sha256": "4ea8efb76afe0c7a75dfcafe01a528fc642a47dc995dc9393b43a8746daff116",
   "language": "Python",
   "lines": 146,
   "truncated": false,
   "block": 17,
   "row": 27717
  },
  {
   "path": "cmp/bidsappmanager/stages/parcellation/parcellation.py",
   "sha256": "08d58678a4ddea0af03d107ef2ff8fa4a59e1cee185628d38163d2c4c81c8614",
   "language": "Python",
   "lines": 158,
   "truncated": false,
   "block": 17,
   "row": 28423
  },
  {
   "path": "cmp/bidsappmanager/stages/preprocessing/fmri_preprocessing.py",
   "sha256": "13a237153d39bea2f155bf380b44a5e2ce819e81dc56d434c5573f69ea507efd",
   "language": "Python",
   "lines": 133,
   "truncated": false,
   "block": 17,
   "row": 26746
  },
  {
   "path": "cmp/bidsappmanager/stages/preprocessing/preprocessing.py",
   "sha256": "f4ea0fe521ac091f32208931550e415508fb0b531c85ea40280b4faa7e957ee6",
   "language": "Python",
   "lines": 182,
   "truncated": false,
   "block": 17,
   "row": 29481
  },
  {
   "path": "cmp/bidsappmanager/stages/registration/registration.py",
   "sha256": "6ed092496eaf83426fb5175963e476e8b9e7fefbcd27e0a1665d5b6681d868cf",
   "language": "Python",
   "lines": 276,
   "truncated": false,
   "block": 17,
   "row": 32420
  },
  {
   "path": "cmp/bidsappmanager/stages/segmentation/segmentation.py",
   "sha256": "d1af79df935ac96eb7e02ea8829c4694805de10501948e2901c4222ceea7e322",
   "language": "Python",
   "lines": 235,
   "truncated": false,
   "block": 17,
   "row": 31584
  },
  {
   "path": "cmp/cli/__init__.py",
   "sha256": "f554aa5d7c8ea42c7e87ff13a97a19ddcb74f3b85066b671e1242fc59dffed64",
   "language": "Python",
   "lines": 1,
   "truncated": false,
   "block": 17,
   "row": 17201
  },
  {
   "path": "cmp/cli/cmpbidsappmanager.py",
   "sha256": "5ab73ebe3c549898faba8e5f6c196d20a95695b2a0f0d702dd5c85703483084f",
   "language": "Python",
   "lines": 170,
   "truncated": false,
   "block": 17,
   "row": 28990
  },
  {
   "path": "cmp/cli/connectomemapper3.py",
   "sha256": "70fc8a7ca4416505457891d4a5d20c0f6f731e3423b1147f2aed7bf429b54bad",
   "language": "Python",
   "lines": 208,
   "truncated": false,
   "block": 17,
   "row": 30208
  },
  {
   "path": "cmp/cli/connectomemapper3_docker.py",
   "sha256": "9f93da487b1a2c7969a68fcdc37ff743faef7c21bb8dddd29cfb9091dce041b6",
   "language": "Python",
   "lines": 157,
   "truncated": false,
   "block": 17,
   "row": 28671
  },
  {
   "path": "cmp/cli/connectomemapper3_singularity.py",
   "sha256": "418a9096b6d4cc0cea4a75fb638177ce1aabf38b2f420ecc0db72da48f6dc04a",
   "language": "Python",
   "lines": 159,
   "truncated": false,
   "block": 17,
   "row": 28820
  },
  {
   "path": "cmp/cli/showmatrix_gpickle.py",
   "sha256": "5fcdfab020d84772f84e66a67d3f7243996ffb6b3d2e9eeabe5f7de4bd626ed6",
   "language": "Python",
   "lines": 557,
   "truncated": false,
   "block": 18,
   "row": 3085
  },
  {
   "path": "cmp/cli/visualize_eeg_pipeline_outputs.py",
   "sha256": "a3f0f58d728f079052aa48654d92e2448a358be948be1d517f6abcd2db33e719",
   "language": "Python",
   "lines": 372,
   "truncated": false,
   "block": 18,
   "row": 674
  },
  {
   "path": "cmp/info.py",
   "sha256": "1ca9df7589679b7c076781a8d30dd8221e10e06ca704378f2d1a0907991e388b",
   "language": "Python",
   "lines": 55,
   "truncated": false,
   "block": 17,
   "row": 21873
  },
  {
   "path": "cmp/parser.py",
   "sha256": "2164feef96ce0c9c64c5dfaf5f73c06ee754e5e369ee55b2b4731ae279be5198",
   "language": "Python",
   "lines": 211,
   "truncated": false,
   "block": 17,
   "row": 30796
  },
  {
   "path": "cmp/pipelines/anatomical/anatomical.py",
   "sha256": "3c602aaa8bdc88f98cac3063b21a7749b37e4cd8e220885d34c76d9c24e079ff",
   "language": "Python",
   "lines": 1111,
   "truncated": false,
   "block": 18,
   "row": 5279
  },
  {
   "path": "cmp/pipelines/common.py",
   "sha256": "ad11a2bc4e15b30143403f78c9668952c667fd91631d403063b850186589e727",
   "language": "Python",
   "lines": 121,
   "truncated": false,
   "block": 17,
   "row": 26864
  },
  {
   "path": "cmp/pipelines/diffusion/diffusion.py",
   "sha256": "42ebaf279d31051c324fb80a9997b5c9eaf5f0246f39d4a7aeee95038abe2af9",
   "language": "Python",
   "lines": 1277,
   "truncated": false,
   "block": 18,
   "row": 5491
  },
  {
   "path": "cmp/pipelines/functional/eeg.py",
   "sha256": "7b75e7c09f93569d2ecceb29d2674870e56e86dcd346aa82941ef11bb1d1aa84",
   "language": "Python",
   "lines": 695,
   "truncated": false,
   "block": 18,
   "row": 4419
  },
  {
   "path": "cmp/pipelines/functional/fMRI.py",
   "sha256": "cae1a5f41d97e8d3274b388bf3347b1febe5475bfc76eb8319f631ec78e793e1",
   "language": "Python",
   "lines": 978,
   "truncated": false,
   "block": 18,
   "row": 5114
  },
  {
   "path": "cmp/project.py",
   "sha256": "0d4d4ef716dc4bccf826f71172b9bdfd5c11c6e71b8f1e2c186d17f058bcc423",
   "language": "Python",
   "lines": 1218,
   "truncated": false,
   "block": 18,
   "row": 5215
  },
  {
   "path": "cmp/stages/common.py",
   "sha256": "6a94efc6c29a0c5522ccb5483b7020845429110504c97de0f35c54aba5997c4d",
   "language": "Python",
   "lines": 85,
   "truncated": false,
   "block": 17,
   "row": 24172
  },
  {
   "path": "cmp/stages/connectome/connectome.py",
   "sha256": "1a70d5e6fef8cfab85df710f9aebdf15daa0efc8fb5d7949184f7b511d529ac6",
   "language": "Python",
   "lines": 265,
   "truncated": false,
   "block": 18,
   "row": 245
  },
  {
   "path": "cmp/stages/connectome/eeg_connectome.py",
   "sha256": "23685b1ea707dffaffd1cbad22e0052835d04134cd0a1080dc6625a361efc484",
   "language": "Python",
   "lines": 203,
   "truncated": false,
   "block": 17,
   "row": 31245
  },
  {
   "path": "cmp/stages/connectome/fmri_connectome.py",
   "sha256": "5c3835d8f8f77a9527a97b926af5724b16c5d135d2f1d88208d9dcf2e637fdb6",
   "language": "Python",
   "lines": 216,
   "truncated": false,
   "block": 17,
   "row": 31239
  },
  {
   "path": "cmp/stages/diffusion/diffusion.py",
   "sha256": "461ea5ce8bbcabf36d0c8f3f050f43fc1a3f9fb0f5f56cc4e8cf64b767445c2e",
   "language": "Python",
   "lines": 866,
   "truncated": false,
   "block": 18,
   "row": 4934
  },
  {
   "path": "cmp/stages/diffusion/reconstruction.py",
   "sha256": "99f13123fbc8c0b91078f8cb6552cb926d7859660bc3fc9c1865111f0598b8fe",
   "language": "Python",
   "lines": 810,
   "truncated": false,
   "block": 18,
   "row": 4452
  },
  {
   "path": "cmp/stages/diffusion/tracking.py",
   "sha256": "a6e0f730de494fb969c9fedf6ed28c0fb9651209cd373a6c886dfaa082629c42",
   "language": "Python",
   "lines": 737,
   "truncated": false,
   "block": 18,
   "row": 3999
  },
  {
   "path": "cmp/stages/eeg/esi.py",
   "sha256": "be955140b11bedbf6ea3450862e3bfb604896616b9f89e64c4d480a2865a1e11",
   "language": "Python",
   "lines": 542,
   "truncated": false,
   "block": 18,
   "row": 3760
  },
  {
   "path": "cmp/stages/eeg/preprocessing.py",
   "sha256": "0582206c0def5bb1bae7f463a92af08d8dffa27ed37cc3ac220a19bb481ccc57",
   "language": "Python",
   "lines": 234,
   "truncated": false,
   "block": 17,
   "row": 32368
  },
  {
   "path": "cmp/stages/functional/functionalMRI.py",
   "sha256": "b48f41cc41184069205d6168cf8be24432aa46d6e9560cd1278e133e3ff5aebe",
   "language": "Python",
   "lines": 311,
   "truncated": false,
   "block": 18,
   "row": 474
  },
  {
   "path": "cmp/stages/parcellation/parcellation.py",
   "sha256": "7f120af63c64ced95fed83114d12fb4fdbb7427d79b9008d35f889009083f5b3",
   "language": "Python",
   "lines": 586,
   "truncated": false,
   "block": 18,
   "row": 4086
  },
  {
   "path": "cmp/stages/preprocessing/fmri_preprocessing.py",
   "sha256": "fd19f3ce812df3455761ff2e1d5d954caf6857407cb7e83ff876b43676db8368",
   "language": "Python",
   "lines": 287,
   "truncated": false,
   "block": 18,
   "row": 345
  },
  {
   "path": "cmp/stages/preprocessing/preprocessing.py",
   "sha256": "532cd52c2cd6791c129de9c8d005640a14e044a126ef16f063838ce2202371da",
   "language": "Python",
   "lines": 1124,
   "truncated": false,
   "block": 18,
   "row": 5229
  },
  {
   "path": "cmp/stages/registration/registration.py",
   "sha256": "959fee246ea7d38a4788b6fb007c925503fec454e5c03949c49649d00e928d7f",
   "language": "Python",
   "lines": 1383,
   "truncated": false,
   "block": 18,
   "row": 5471
  },
  {
   "path": "cmp/stages/segmentation/segmentation.py",
   "sha256": "3c67486e5213b55dc516c00a93b76cf09a22b7ac8dbf1fde8899b0c962c8cc7b",
   "language": "Python",
   "lines": 676,
   "truncated": false,
   "block": 18,
   "row": 4520
  },
  {
   "path": "cmp/viz/reports.py",
   "sha256": "a4f0a1713120df9312a6d055ccc2ab600554f04915faa1e778e39a4182c4b3b1",
   "language": "Python",
   "lines": 417,
   "truncated": false,
   "block": 18,
   "row": 2217
  },
  {
   "path": "cmtklib/bids/io.py",
   "sha256": "e4538414496690cf8c8154c10a0f1abaa31e92c6b38f0dbe382b96f9e723c0af",
   "language": "Python",
   "lines": 390,
   "truncated": false,
   "block": 18,
   "row": 1874
  },
  {
   "path": "cmtklib/bids/network.py",
   "sha256": "d86824e29b91abd701e829e9e30ee21f8694db7e2edc448492512635dbb25e90",
   "language": "Python",
   "lines": 103,
   "truncated": false,
   "block": 17,
   "row": 26621
  },
  {
   "path": "cmtklib/bids/utils.py",
   "sha256": "7b85117d50e375e9087f3a66bfe7a8c717792e7c75385b44e5497c3686dcae53",
   "language": "Python",
   "lines": 536,
   "truncated": false,
   "block": 18,
   "row": 3470
  },
  {
   "path": "cmtklib/carbonfootprint.py",
   "sha256": "44e7aec50b2ee223b373b8784993f5d9a2b5925077e99286e3dc7fb202084a42",
   "language": "Python",
   "lines": 344,
   "truncated": false,
   "block": 18,
   "row": 1574
  },
  {
   "path": "cmtklib/config.py",
   "sha256": "2ae44f88eec05bf281d2709f2fbfcb5348df4c9b5026369e867deb3b266c1572",
   "language": "Python",
   "lines": 879,
   "truncated": false,
   "block": 18,
   "row": 4683
  },
  {
   "path": "cmtklib/connectome.py",
   "sha256": "7d48721e3304c9bd3862ad8d07f46582ae5e47de7ce29c6712af8a6ad63a06c1",
   "language": "Python",
   "lines": 1085,
   "truncated": false,
   "block": 18,
   "row": 5123
  },
  {
   "path": "cmtklib/data/parcellation/util.py",
   "sha256": "e04648180530e7895da24a0b208de953e6070eb3d7b9fcd624278c54bb97f1cc",
   "language": "Python",
   "lines": 65,
   "truncated": false,
   "block": 17,
   "row": 22554
  },
  {
   "path": "cmtklib/data/parcellation/viz.py",
   "sha256": "1bc4f2229a28004b1adbb31121a8031870bdb428516326dcdaa5fd8fea58d474",
   "language": "Python",
   "lines": 128,
   "truncated": false,
   "block": 17,
   "row": 27372
  },
  {
   "path": "cmtklib/data/report/carbonfootprint/js/jquery.3.3.1.min.js",
   "sha256": "160a426ff2894252cd7cebbdd6d6b7da8fcd319c65b70468f10b6690c45d02ef",
   "language": "JavaScript",
   "lines": 2,
   "truncated": false,
   "block": 17,
   "row": 5247
  },
  {
   "path": "cmtklib/data/segmentation/ants_template_IXI/Priors/gen_3class-priors.py",
   "sha256": "53974101af56493fba75e86b61c19cd4d36f4f0b2da255c4887f60a3807f1303",
   "language": "Python",
   "lines": 39,
   "truncated": false,
   "block": 17,
   "row": 21667
  },
  {
   "path": "cmtklib/data/segmentation/ants_template_IXI/gen_3class-priors.py",
   "sha256": "23c16c8739d32f765ba8b729d47c4ab2d1d67145deb801b469c6af6ac9f01981",
   "language": "Python",
   "lines": 40,
   "truncated": false,
   "block": 17,
   "row": 21706
  },
  {
   "path": "cmtklib/diffusion.py",
   "sha256": "0118db9653230e66e9817defebe815e21e45eea9fcc3704496851d22b81af9ba",
   "language": "Python",
   "lines": 649,
   "truncated": false,
   "block": 18,
   "row": 3721
  },
  {
   "path": "cmtklib/eeg.py",
   "sha256": "b76af5c58f69da610d1cab60d25e43bca66481d4f21fc5f0094b6d40e42af1ed",
   "language": "Python",
   "lines": 173,
   "truncated": false,
   "block": 17,
   "row": 29766
  },
  {
   "path": "cmtklib/functionalMRI.py",
   "sha256": "a603fd4a364dfbbb2c05fadc781fed34f02501221a4da9600a56a301e52ea415",
   "language": "Python",
   "lines": 538,
   "truncated": false,
   "block": 18,
   "row": 3511
  },
  {
   "path": "cmtklib/interfaces/afni.py",
   "sha256": "e95bf71fb3b8d4d470094e86f5972ccdf7ce1e5001aaf91efc7f0fe0b0e55da5",
   "language": "Python",
   "lines": 210,
   "truncated": false,
   "block": 17,
   "row": 30631
  },
  {
   "path": "cmtklib/interfaces/ants.py",
   "sha256": "71914a9e52275801b24db549347207f4e7e8e7f63074933f0eaa36e9be4b4b42",
   "language": "Python",
   "lines": 87,
   "truncated": false,
   "block": 17,
   "row": 26290
  },
  {
   "path": "cmtklib/interfaces/dipy.py",
   "sha256": "802b11d90e177df3e337ab396136f780ff34a26bfc604478062ec1f1cb228904",
   "language": "Python",
   "lines": 1206,
   "truncated": false,
   "block": 18,
   "row": 5374
  },
  {
   "path": "cmtklib/interfaces/freesurfer.py",
   "sha256": "f6afc066b616dae63cac087199de6b27c3ac311937553d2981202cace3f78062",
   "language": "Python",
   "lines": 274,
   "truncated": false,
   "block": 18,
   "row": 534
  },
  {
   "path": "cmtklib/interfaces/fsl.py",
   "sha256": "d67982f16fd0953c57c6acf814dfe7135eeff413d26e378606f1bb6a3ba7c619",
   "language": "Python",
   "lines": 634,
   "truncated": false,
   "block": 18,
   "row": 3913
  },
  {
   "path": "cmtklib/interfaces/misc.py",
   "sha256": "a2159e2d979e0d3bde23398ab6e8c07ba3afed4480c6ed94e21f6f08cf006d25",
   "language": "Python",
   "lines": 179,
   "truncated": false,
   "block": 17,
   "row": 30117
  },
  {
   "path": "cmtklib/interfaces/mne.py",
   "sha256": "062aced95df7e90f98a56880066a777313b81e544df5736e4d535fc533ab0a31",
   "language": "Python",
   "lines": 767,
   "truncated": false,
   "block": 18,
   "row": 4501
  },
  {
   "path": "cmtklib/interfaces/mrtrix3.py",
   "sha256": "f27db0c8932a489737d62267c70d1164d531c981f4ba12d8cac5eb5b1a5ebe50",
   "language": "Python",
   "lines": 1854,
   "truncated": false,
   "block": 18,
   "row": 5676
  },
  {
   "path": "cmtklib/interfaces/pycartool.py",
   "sha256": "094cc1e075781b1c6e3ae48cc1215a7a80b70a8d9a27654a546600b726f9ecdb",
   "language": "Python",
   "lines": 237,
   "truncated": false,
   "block": 17,
   "row": 32412
  },
  {
   "path": "cmtklib/parcellation.py",
   "sha256": "8c5880d51378b9a50b2bb64efd8757849501ac73cf87ea81c97e24a3401ddd87",
   "language": "Python",
   "lines": 3108,
   "truncated": false,
   "block": 18,
   "row": 5846
  },
  {
   "path": "cmtklib/process.py",
   "sha256": "239441501572d795b271c814fe7dd79ed1ca1f536ef38ba570d1a7c7771b9bdf",
   "language": "Python",
   "lines": 55,
   "truncated": false,
   "block": 17,
   "row": 21322
  },
  {
   "path": "cmtklib/util.py",
   "sha256": "7b70d029507505db7913bf9835b433c51c8eec9de0cceb43c5ef6adb81a19e55",
   "language": "Python",
   "lines": 490,
   "truncated": false,
   "block": 18,
   "row": 1543
  },
  {
   "path": "docs/conf.py",
   "sha256": "c808e5d542ccab54ecf2ff9b933decc7fe34c53e1f57e5846e45cbc64d7b5ced",
   "language": "Python",
   "lines": 386,
   "truncated": false,
   "block": 18,
   "row": 1270
  },
  {
   "path": "docs/notebooks/EEG_pipeline_tutorial.ipynb",
   "sha256": "e451e8c3fbd8467d4ca17a4ba3f33104e10fe83efc0cc67a761af820c3fc8b1b",
   "language": "Jupyter",
   "lines": 686,
   "truncated": false,
   "block": 17,
   "row": 7310
  },
  {
   "path": "docs/notebooks/EEG_tutorial_utils.py",
   "sha256": "203e9cc6d60e63266a395629251d7ea26339be76b2e56c6d85e45980da1bed2a",
   "language": "Python",
   "lines": 155,
   "truncated": false,
   "block": 17,
   "row": 29091
  },
  {
   "path": "docs/notebooks/analysis_tutorial.ipynb",
   "sha256": "f0a4270e89b6064024a9e3f28518c1c68c4c2e2f5368c8ee17dde011bbed0206",
   "language": "Jupyter",
   "lines": 305,
   "truncated": false,
   "block": 17,
   "row": 6706
  },
  {
   "path": "docs/notebooks/analyze_connectivity.ipynb",
   "sha256": "d6af02224f5d0ca1de9595508d71ae6b59b70599a5d9c3fb15f0fb6413412a7a",
   "language": "Jupyter",
   "lines": 314,
   "truncated": false,
   "block": 17,
   "row": 6798
  },
  {
   "path": "docs/notebooks/create_bids_parcellation_node_description_file.ipynb",
   "sha256": "9cfeccce687b08c8e767e69293de2200284adcfab5d1ba606f668f9f1b3b07c5",
   "language": "Jupyter",
   "lines": 127,
   "truncated": false,
   "block": 17,
   "row": 5997
  },
  {
   "path": "docs/notebooks/create_graphml_parcellation_node_description_file.ipynb",
   "sha256": "313c8253786a697601f0e0e46772218c42e571efc03fa908d6e3d6690eab3143",
   "language": "Jupyter",
   "lines": 166,
   "truncated": false,
   "block": 17,
   "row": 6248
  },
  {
   "path": "docs/notebooks/custom_anatomical_input_grabber.ipynb",
   "sha256": "7e29ee70917c08023675dfd2e754be5571b148625a0598c7629294686bbf57f7",
   "language": "Jupyter",
   "lines": 562,
   "truncated": false,
   "block": 17,
   "row": 7037
  },
  {
   "path": "docs/notebooks/start_bidsappmanager_from_notebook.ipynb",
   "sha256": "a7c14f68fcf81c54925ffee1628c1ad09743a487baca0a78880c682597fe6408",
   "language": "Jupyter",
   "lines": 60,
   "truncated": false,
   "block": 17,
   "row": 5474
  },
  {
   "path": "docs/notebooks/start_jupyter_notebook.sh",
   "sha256": "7ad236bdd5b2e498e8f13cc9cb8cd6e98b115a9d9b65e8b1d83fd884dc616cfd",
   "language": "Shell",
   "lines": 3,
   "truncated": false,
   "block": 18,
   "row": 8749
  },
  {
   "path": "get_version.py",
   "sha256": "4b7c71fee6a0fd271cf38ae974f4cdcec20899d72fb661cf8850898fe411ff6a",
   "language": "Python",
   "lines": 16,
   "truncated": false,
   "block": 17,
   "row": 18137
  },
  {
   "path": "paper/build_paper_docker.sh",
   "sha256": "2c7e67e1b37e03fccc09d226cc4e8ebf94d414fff1f5e30bb3b43db9661758c6",
   "language": "Shell",
   "lines": 8,
   "truncated": false,
   "block": 18,
   "row": 8743
  },
  {
   "path": "run.py",
   "sha256": "20faf4231759e03a69d721ee3df778fa455752cd38f7028189407069252de7a5",
   "language": "Python",
   "lines": 653,
   "truncated": false,
   "block": 18,
   "row": 4271
  },
  {
   "path": "scripts/bidsapp/run_cmp3.sh",
   "sha256": "1096349aa709f6c98dd365beb248d914eaba2e83a909f3d5e2f8a70c79770527",
   "language": "Shell",
   "lines": 4,
   "truncated": false,
   "block": 18,
   "row": 8714
  },
  {
   "path": "scripts/bidsapp/run_coverage_cmp3.sh",
   "sha256": "4ddd98ed21be5533c3fcf13c21b1df60d36bfd77ef48a49bcdedcc564c1c621f",
   "language": "Shell",
   "lines": 15,
   "truncated": false,
   "block": 18,
   "row": 9074
  },
  {
   "path": "scripts/others/create_connectome_report.py",
   "sha256": "c17b19d7e6b2686920872743b9b6a7f8495643dc8a412cade76322129f8d7f5f",
   "language": "Python",
   "lines": 180,
   "truncated": false,
   "block": 17,
   "row": 29649
  },
  {
   "path": "scripts/others/create_multishell_dwi.py",
   "sha256": "ff7968f25a6b8fd9c391f9423cd268d76f5c89fe35534415b7f244320815765f",
   "language": "Python",
   "lines": 169,
   "truncated": false,
   "block": 17,
   "row": 30952
  },
  {
   "path": "scripts/utils/build_bidsapp.sh",
   "sha256": "6235ee971b69d6aaa0a34db16f2085abe935566059f62b2433859fc3751967e7",
   "language": "Shell",
   "lines": 41,
   "truncated": false,
   "block": 18,
   "row": 9597
  },
  {
   "path": "scripts/utils/build_docs.sh",
   "sha256": "79e3fa42c2c8a2a096949fe784dec85d4f0af47f0814323e00b6b9e91eca59c6",
   "language": "Shell",
   "lines": 41,
   "truncated": false,
   "block": 18,
   "row": 9649
  },
  {
   "path": "scripts/utils/run_gource.sh",
   "sha256": "21c4b393480eb96813e09d638264434fab1c6138690aa55c2ea460c474cb3418",
   "language": "Shell",
   "lines": 10,
   "truncated": false,
   "block": 18,
   "row": 8970
  },
  {
   "path": "setup.py",
   "sha256": "f228cb9b12f7ea37bc210c60eb6610c14b0e164c3bf9a4718b4398518113189c",
   "language": "Python",
   "lines": 191,
   "truncated": false,
   "block": 17,
   "row": 30538
  },
  {
   "path": "setup_pypi.py",
   "sha256": "aec3bf7a12d2485948dfca17aed3ff46e318716559614f68bb91ae8078369e31",
   "language": "Python",
   "lines": 188,
   "truncated": false,
   "block": 17,
   "row": 30324
  },
  {
   "path": "tests/summary_table.py",
   "sha256": "f74587a87b3f46de88d836e4718af311b30a66fb362a25b1e3fab5c7f63d39f0",
   "language": "Python",
   "lines": 140,
   "truncated": false,
   "block": 17,
   "row": 27411
  },
  {
   "path": "tests/test_PFT_tracking.py",
   "sha256": "fb28cfbcd8a919ae7ce79f7c3259304598820868c8e4d3aee79cf121efaa7be2",
   "language": "Python",
   "lines": 35,
   "truncated": false,
   "block": 17,
   "row": 20454
  },
  {
   "path": "tests/test_cmat.py",
   "sha256": "380f9701a731240f001a11552b84dd7ba9ac5ac04e8b3a0ca2bbe94b95099cc2",
   "language": "Python",
   "lines": 45,
   "truncated": false,
   "block": 17,
   "row": 26540
  },
  {
   "path": "tests/test_dipy_pft.py",
   "sha256": "2cc312170ec49156b2b81b375a6b5ca0883b10dd7d3311257f3fcfc44e971642",
   "language": "Python",
   "lines": 103,
   "truncated": false,
   "block": 17,
   "row": 28063
  },
  {
   "path": "tests/test_parcellation_interfaces.py",
   "sha256": "4036a8f5e97eba904e23984a87a0382079a5b772524eb4be74af19cdc0ed55d3",
   "language": "Python",
   "lines": 329,
   "truncated": false,
   "block": 18,
   "row": 1744
  },
  {
   "path": "tests/test_seeding.py",
   "sha256": "03836681d5f5f156de2845ad0de73ea836720dda71938b262d9db4eaa7f6534c",
   "language": "Python",
   "lines": 145,
   "truncated": false,
   "block": 17,
   "row": 29510
  }
 ]
}