{ "format": "oscr-script-manifest/1", "repository": "github.com/raamana/visualqc", "url": "https://github.com/raamana/visualqc/blob/master/docs/VisualQC_TrainingManual_v1p4.pdf", "host": "github.com", "commit": "7c361a7e9badd2df80ff7b9376a0fbbb0093d19a", "license": "Apache-2.0", "license_confirmed_by": "license file LICENSE", "redistribution": "yes", "files": [ { "path": "LICENSE", "sha256": "f722675b048e330edba48558072c17395ac0fe0d5b7519e70aa960bc4e2c14b9", "language": "License", "lines": 201, "truncated": false, "block": 20, "row": 8857 }, { "path": "README.rst", "sha256": "3eb5bfa3e29f58e3452808c4b35c02967b4edbec975f73fc3ae84daf049bdd0b", "language": "Text", "lines": 81, "truncated": false, "block": 21, "row": 3024 }, { "path": "docs/conf.py", "sha256": "e3348056f187542939a86509f992c5111e6412477f7c2c16e6a76d045e7bd8c5", "language": "Python", "lines": 311, "truncated": false, "block": 20, "row": 19998 }, { "path": "scripts/generate_rendered_images_3Dvolume_deface.m", "sha256": "cbf6a4cef88116d2bd84351cc73729de1c83c4a37cf5a19e7d749eccbe866999", "language": "MATLAB", "lines": 77, "truncated": false, "block": 20, "row": 10303 }, { "path": "visualqc/__alignment__.py", "sha256": "b95d4cfc275c929bf7edc1f5620dc43ce5ea1b8e16d6c9f6cb0ac13649f31322", "language": "Python", "lines": 16, "truncated": false, "block": 20, "row": 12851 }, { "path": "visualqc/__defacing__.py", "sha256": "635125765ad679332276ba1457cbb803e88f95e601cfdd36db3684f8962707ae", "language": "Python", "lines": 22, "truncated": false, "block": 20, "row": 13390 }, { "path": "visualqc/__diffusion__.py", "sha256": "895de61e83512c85b25756207d47bbc6ab11c00968f4d775c0ce8c29f1927c90", "language": "Python", "lines": 16, "truncated": false, "block": 20, "row": 12850 }, { "path": "visualqc/__freesurfer__.py", "sha256": "1833cd967f2c0b82a166a65e98cf7ba0d6d58ae3fa40cac0fdddf713b2f64750", "language": "Python", "lines": 16, "truncated": false, "block": 20, "row": 12857 }, { "path": "visualqc/__func_mri__.py", "sha256": "4ea21cb6902d37f93580fd5c3a9ac1f7297fcfccd21b203d13bf8363d02173f6", "language": "Python", "lines": 16, "truncated": false, "block": 20, "row": 12868 }, { "path": "visualqc/__init__.py", "sha256": "dd32260b8461f5807c51600eb4596481fdd4e1b4f720b45f12b36a8fbe831477", "language": "Python", "lines": 30, "truncated": false, "block": 20, "row": 13945 }, { "path": "visualqc/__t1_mri__.py", "sha256": "360fb09f18a8de1f8dcf64db2a7dde9c61c27753ae9485515c50d19b3e24c34a", "language": "Python", "lines": 16, "truncated": false, "block": 20, "row": 12783 }, { "path": "visualqc/alignment.py", "sha256": "831e1d3b2458659a74a6f7b68e49d2c6283719948116261a5a132b54878d8a07", "language": "Python", "lines": 901, "truncated": false, "block": 21, "row": 152 }, { "path": "visualqc/config.py", "sha256": "3afb4f1e33cd2f0ab86a03f9076338d889166adc89d28c6c920c2db29d76fb03", "language": "Python", "lines": 465, "truncated": false, "block": 20, "row": 21441 }, { "path": "visualqc/defacing.py", "sha256": "465527f0e0d13d78979a1c43b54c57a7d3915c7f1312b824ad7eaa229e493578", "language": "Python", "lines": 711, "truncated": false, "block": 20, "row": 21897 }, { "path": "visualqc/diffusion.py", "sha256": "1f3b157f71f2f616aa8873121852bf75514f81b70990d1d1159b11e7afe8e576", "language": "Python", "lines": 1543, "truncated": false, "block": 21, "row": 404 }, { "path": "visualqc/features.py", "sha256": "1f726624ed174ffbdd12b0998f77c6505f36203be6a233ca0ec411db9b7265bd", "language": "Python", "lines": 110, "truncated": false, "block": 20, "row": 16840 }, { "path": "visualqc/freesurfer.py", "sha256": "14798eebd8404850f8485031e3c52769e9842599e46e4fc40269edb7fcce3388", "language": "Python", "lines": 1207, "truncated": false, "block": 21, "row": 338 }, { "path": "visualqc/functional_mri.py", "sha256": "9d55b14994da521189197e319f2c1c4a62638238a7c59a24cc992839757fcedc", "language": "Python", "lines": 1236, "truncated": false, "block": 21, "row": 328 }, { "path": "visualqc/image_utils.py", "sha256": "1dc219d7cda6a14cc82bda8868237e1fe7b83bb6e279ea1cb2581892c0c6eaa3", "language": "Python", "lines": 295, "truncated": false, "block": 20, "row": 19982 }, { "path": "visualqc/interfaces.py", "sha256": "7c511275e46577faa80066717b69b870f82029e3396ec29b28b7dd2788555882", "language": "Python", "lines": 198, "truncated": false, "block": 20, "row": 18868 }, { "path": "visualqc/outliers.py", "sha256": "3fb81d867d5ca519b034ac6e21f37a60eadd57268690807b7b13b39a70c1dc6a", "language": "Python", "lines": 115, "truncated": false, "block": 20, "row": 17597 }, { "path": "visualqc/readers.py", "sha256": "f60a770daaf09e685460fea84fb5321274213c81e207ffa0df5057b0d94864ef", "language": "Python", "lines": 536, "truncated": false, "block": 20, "row": 21560 }, { "path": "visualqc/t1_mri.py", "sha256": "36bd9a0dc66a957e1ec0eaef3b80b3e03e6b9f743c54809c193075e3591a26e7", "language": "Python", "lines": 904, "truncated": false, "block": 21, "row": 126 }, { "path": "visualqc/tests/reg_to_mni.py", "sha256": "500c411c87938db0841a0c011a557d16cc98f8efd9c78862b87b0a73dae47d96", "language": "Python", "lines": 47, "truncated": false, "block": 20, "row": 15111 }, { "path": "visualqc/tests/test_defacing.py", "sha256": "6b4f0390034780228d71c007d9ca14e38a88caaed6d0ee6d360f1047ddd9f5d2", "language": "Python", "lines": 27, "truncated": false, "block": 20, "row": 13957 }, { "path": "visualqc/tests/test_freesurfer_new_api.py", "sha256": "5557ad02e6ca43ada42bc6781b234152e84cf7a14a633e622b4ea23e88beb766", "language": "Python", "lines": 28, "truncated": false, "block": 20, "row": 13908 }, { "path": "visualqc/tests/test_func_mri_qc.py", "sha256": "f744ed1f233a155e79dc63b9669a18c826b64b673d8eed69e9a24624edf7ac4f", "language": "Python", "lines": 20, "truncated": false, "block": 20, "row": 13465 }, { "path": "visualqc/tests/test_visualqc.py", "sha256": "2c01027300350d4cd1cbaa9b9c0a34630030394e1657cda01588d6bddab3fc1e", "language": "Python", "lines": 98, "truncated": false, "block": 20, "row": 17323 }, { "path": "visualqc/utils.py", "sha256": "c0e5b3e8b7eefdac9a6a1db782573909e0c1b87037a602b84657f45a8541662b", "language": "Python", "lines": 1272, "truncated": false, "block": 21, "row": 264 }, { "path": "visualqc/workflows.py", "sha256": "21f8a545569ee56224a21a73b6f1491479929fd1f37cc1187458a7e61bf3b5a0", "language": "Python", "lines": 546, "truncated": false, "block": 20, "row": 21396 } ] }