YongchengYAO commited on
Commit
7e8507d
·
verified ·
1 Parent(s): f89fc6a

Update dataset card

Browse files
Files changed (1) hide show
  1. README.md +17 -1
README.md CHANGED
@@ -42,7 +42,7 @@ This is a preprocessed redistribution of [DEEP-PSMA](https://deep-psma.grand-cha
42
 
43
  All **100 cases** and **both tracers** are included, but the **CT** and `totseg_24` volumes are not redistributed. The total-tumour-burden annotation is defined by SUV thresholding on the **PET** and is delivered on the PET grid (e.g. `192x192x335` at `2.87 x 2.87 x 3.27` mm). The CT of a PET/CT is acquired at roughly 1 mm for attenuation correction, so using it as the image would require resampling the mask onto a ~3x finer grid — inventing lesion boundary detail that was never annotated and changing the physical measurements.
44
 
45
- **Why `-Lite`?** The suffix marks this as a *derived* redistribution rather than a copy of the source. These are **preprocessed** volumes — every case has been format-converted, geometry-normalised and reoriented to RAS+ — and for some sources cases or modalities are excluded as well (see the table above). Use it to reproduce MedVision, not as a substitute for the original release. See [Preprocessing](#preprocessing) below for exactly what was changed.
46
 
47
 
48
  ## Preprocessing
@@ -78,12 +78,28 @@ landmarks_map = {
78
 
79
  - `DEEP-PSMA_BoxSize_Task01_Axial_Test`
80
  - `DEEP-PSMA_BoxSize_Task01_Axial_Train`
 
 
 
 
81
  - `DEEP-PSMA_BoxSize_Task02_Axial_Test`
82
  - `DEEP-PSMA_BoxSize_Task02_Axial_Train`
 
 
 
 
83
  - `DEEP-PSMA_MaskSize_Task01_Axial_Test`
84
  - `DEEP-PSMA_MaskSize_Task01_Axial_Train`
 
 
 
 
85
  - `DEEP-PSMA_MaskSize_Task02_Axial_Test`
86
  - `DEEP-PSMA_MaskSize_Task02_Axial_Train`
 
 
 
 
87
  - `DEEP-PSMA_TumorLesionSize_Task01_Axial_Test`
88
  - `DEEP-PSMA_TumorLesionSize_Task01_Axial_Train`
89
  - `DEEP-PSMA_TumorLesionSize_Task02_Axial_Test`
 
42
 
43
  All **100 cases** and **both tracers** are included, but the **CT** and `totseg_24` volumes are not redistributed. The total-tumour-burden annotation is defined by SUV thresholding on the **PET** and is delivered on the PET grid (e.g. `192x192x335` at `2.87 x 2.87 x 3.27` mm). The CT of a PET/CT is acquired at roughly 1 mm for attenuation correction, so using it as the image would require resampling the mask onto a ~3x finer grid — inventing lesion boundary detail that was never annotated and changing the physical measurements.
44
 
45
+ **Why `-Lite`?** The suffix marks this as a *derived* redistribution rather than a copy of the source. These are **preprocessed** volumes — every case has been format-converted where needed, geometry-normalised and reoriented to RAS+ — and for some sources cases or modalities are excluded as well (see the table above). Use it to reproduce MedVision, not as a substitute for the original release. See [Preprocessing](#preprocessing) below for exactly what was changed.
46
 
47
 
48
  ## Preprocessing
 
78
 
79
  - `DEEP-PSMA_BoxSize_Task01_Axial_Test`
80
  - `DEEP-PSMA_BoxSize_Task01_Axial_Train`
81
+ - `DEEP-PSMA_BoxSize_Task01_Coronal_Test`
82
+ - `DEEP-PSMA_BoxSize_Task01_Coronal_Train`
83
+ - `DEEP-PSMA_BoxSize_Task01_Sagittal_Test`
84
+ - `DEEP-PSMA_BoxSize_Task01_Sagittal_Train`
85
  - `DEEP-PSMA_BoxSize_Task02_Axial_Test`
86
  - `DEEP-PSMA_BoxSize_Task02_Axial_Train`
87
+ - `DEEP-PSMA_BoxSize_Task02_Coronal_Test`
88
+ - `DEEP-PSMA_BoxSize_Task02_Coronal_Train`
89
+ - `DEEP-PSMA_BoxSize_Task02_Sagittal_Test`
90
+ - `DEEP-PSMA_BoxSize_Task02_Sagittal_Train`
91
  - `DEEP-PSMA_MaskSize_Task01_Axial_Test`
92
  - `DEEP-PSMA_MaskSize_Task01_Axial_Train`
93
+ - `DEEP-PSMA_MaskSize_Task01_Coronal_Test`
94
+ - `DEEP-PSMA_MaskSize_Task01_Coronal_Train`
95
+ - `DEEP-PSMA_MaskSize_Task01_Sagittal_Test`
96
+ - `DEEP-PSMA_MaskSize_Task01_Sagittal_Train`
97
  - `DEEP-PSMA_MaskSize_Task02_Axial_Test`
98
  - `DEEP-PSMA_MaskSize_Task02_Axial_Train`
99
+ - `DEEP-PSMA_MaskSize_Task02_Coronal_Test`
100
+ - `DEEP-PSMA_MaskSize_Task02_Coronal_Train`
101
+ - `DEEP-PSMA_MaskSize_Task02_Sagittal_Test`
102
+ - `DEEP-PSMA_MaskSize_Task02_Sagittal_Train`
103
  - `DEEP-PSMA_TumorLesionSize_Task01_Axial_Test`
104
  - `DEEP-PSMA_TumorLesionSize_Task01_Axial_Train`
105
  - `DEEP-PSMA_TumorLesionSize_Task02_Axial_Test`