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README.md
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- valerie
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- visualization
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- biomarker
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configs:
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- config_name: default
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data_files:
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- split: train
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path: data/train-*
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dataset_info:
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features:
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- name: image
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dtype: image
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- name: figure_panels
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dtype: string
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- name: cell_types
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dtype: string
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- name: n_cells
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dtype: int64
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- name: method
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dtype: string
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- name: event
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dtype: string
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splits:
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- name: train
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num_bytes: 233716
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num_examples: 2
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download_size: 238354
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dataset_size: 233716
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---
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# lsec-biomarkers-splicing-viz-stab2-plot-v1
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## Dataset Info
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- **Rows**:
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- **Columns**: 6
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## Columns
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| Column | Type | Description |
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|--------|------|-------------|
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| image | Image(mode=None, decode=True) | PNG plot from PlotPSI: per-cell coverage-ratio PSI heatmap, mean PSI +/- bootstrap CI per group, and -log10 p-value track |
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| figure_panels | Value('string') | which panels the single PNG contains |
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| cell_types | Value('string') | cell types compared |
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| n_cells | Value('int64') | total split cells in the plot |
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"experiment_name": "lsec-biomarkers-splicing-viz",
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"cluster": "turso",
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"artifact_status": "final",
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"job_id": "turso:
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"canary":
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"description": "
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"hyperparameters": {},
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"input_datasets": []
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}
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- valerie
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- visualization
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- biomarker
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---
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# lsec-biomarkers-splicing-viz-stab2-plot-v1
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VALERIE v2.1.2 PlotPSI output for the STAB2 event (1929 split LSEC cells, cell.types=Healthy,F0,F2-3,F4, method=kw). Per-group split cells with >=2 region reads (coverage proxy): Healthy=779,F0=426,F2-3=478,F4=166.
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## Dataset Info
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- **Rows**: 2
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- **Columns**: 6
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## Columns
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| Column | Type | Description |
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|--------|------|-------------|
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| image | Image(mode=None, decode=True) | PNG plot from PlotPSI: per-cell coverage-ratio PSI heatmap, mean PSI +/- bootstrap CI per group, and -log10 p-value track (kw per coordinate) |
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| figure_panels | Value('string') | which panels the single PNG contains |
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| cell_types | Value('string') | cell types compared |
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| n_cells | Value('int64') | total split cells in the plot |
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"experiment_name": "lsec-biomarkers-splicing-viz",
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"cluster": "turso",
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"artifact_status": "final",
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"job_id": "turso:75307294",
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"canary": false,
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"description": "VALERIE v2.1.2 PlotPSI output for the STAB2 event (1929 split LSEC cells, cell.types=Healthy,F0,F2-3,F4, method=kw). Per-group split cells with >=2 region reads (coverage proxy): Healthy=779,F0=426,F2-3=478,F4=166.",
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"hyperparameters": {},
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"input_datasets": []
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}
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