The full dataset viewer is not available (click to read why). Only showing a preview of the rows.
The dataset generation failed because of a cast error
Error code: DatasetGenerationCastError
Exception: DatasetGenerationCastError
Message: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 2 new columns ({'Value', 'Key'}) and 18 missing columns ({'field', 'border_fraction', 'max_object_fraction', 'object_type', 'tiny_fraction', 'diameter_ratio', 'foreground_fraction', 'median_diameter', 'outlier_fraction', 'severity', 'n_objects', 'flags', 'median_area', 'count_ratio', 'mad_diameter', 'note', 'n_interior', 'split_ratio'}).
This happened while the csv dataset builder was generating data using
hf://datasets/einarolafsson/spacr-example-measure/settings/gen_mask_settings.csv (at revision 636ea1d1fa44bb00d0be9961f3bb4121ff48a835), ['hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_cell.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_nucleus.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_pathogen.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/settings/gen_mask_settings.csv']
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback: Traceback (most recent call last):
File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1848, in _prepare_split_single
writer.write_table(table)
~~~~~~~~~~~~~~~~~~^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 765, in write_table
self._write_table(pa_table, writer_batch_size=writer_batch_size)
~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 773, in _write_table
pa_table = table_cast(pa_table, self._schema)
File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2378, in table_cast
return cast_table_to_schema(table, schema)
File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2306, in cast_table_to_schema
raise CastError(
...<3 lines>...
)
datasets.table.CastError: Couldn't cast
Key: string
Value: string
-- schema metadata --
pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 495
to
{'field': Value('string'), 'object_type': Value('string'), 'n_objects': Value('int64'), 'severity': Value('string'), 'flags': Value('string'), 'border_fraction': Value('float64'), 'count_ratio': Value('float64'), 'diameter_ratio': Value('float64'), 'foreground_fraction': Value('float64'), 'mad_diameter': Value('float64'), 'max_object_fraction': Value('float64'), 'median_area': Value('float64'), 'median_diameter': Value('float64'), 'n_interior': Value('int64'), 'outlier_fraction': Value('float64'), 'split_ratio': Value('float64'), 'tiny_fraction': Value('float64'), 'note': Value('string')}
because column names don't match
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1369, in compute_config_parquet_and_info_response
parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
~~~~~~~~~~~~~~~~~~~~~~~~~^
builder, max_dataset_size_bytes=max_dataset_size_bytes
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
)
^
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 948, in stream_convert_to_parquet
builder._prepare_split(split_generator=splits_generators[split], file_format="parquet")
~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1694, in _prepare_split
for job_id, done, content in self._prepare_split_single(
~~~~~~~~~~~~~~~~~~~~~~~~~~^
gen_kwargs=gen_kwargs, job_id=job_id, **_prepare_split_args
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
):
^
File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1850, in _prepare_split_single
raise DatasetGenerationCastError.from_cast_error(
...<4 lines>...
)
datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 2 new columns ({'Value', 'Key'}) and 18 missing columns ({'field', 'border_fraction', 'max_object_fraction', 'object_type', 'tiny_fraction', 'diameter_ratio', 'foreground_fraction', 'median_diameter', 'outlier_fraction', 'severity', 'n_objects', 'flags', 'median_area', 'count_ratio', 'mad_diameter', 'note', 'n_interior', 'split_ratio'}).
This happened while the csv dataset builder was generating data using
hf://datasets/einarolafsson/spacr-example-measure/settings/gen_mask_settings.csv (at revision 636ea1d1fa44bb00d0be9961f3bb4121ff48a835), ['hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_cell.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_nucleus.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_pathogen.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/settings/gen_mask_settings.csv']
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
field string | object_type string | n_objects int64 | severity string | flags string | border_fraction float64 | count_ratio float64 | diameter_ratio float64 | foreground_fraction float64 | mad_diameter float64 | max_object_fraction float64 | median_area float64 | median_diameter float64 | n_interior int64 | outlier_fraction float64 | split_ratio float64 | tiny_fraction float64 | note string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
plate1_E01_10_1 | cell | 63 | ok | null | 0.238095 | 1.21154 | 1.03046 | 0.359142 | 26.6714 | 0.015218 | 23,882.5 | 174.378 | 48 | 0 | 1.01587 | 0 | 63 cell(s), median diameter 174.4 px, 24% on the border, foreground 35.9%. Nothing wrong with this field. |
plate1_E01_11_1 | cell | 51 | ok | null | 0.235294 | 0.980769 | 1.07108 | 0.287782 | 23.0474 | 0.012302 | 25,802 | 181.252 | 39 | 0 | null | 0 | 51 cell(s), median diameter 181.3 px, 24% on the border, foreground 28.8%. Nothing wrong with this field. |
plate1_E01_12_1 | cell | 40 | warn | high_border_fraction | 0.425 | 0.769231 | 1.21619 | 0.284499 | 29.8747 | 0.015875 | 33,267 | 205.808 | 23 | 0 | null | 0 | 40 cell(s), median diameter 205.8 px, 42% on the border, foreground 28.4%. 42% of objects touch the field edge, so their crops will be truncated. |
plate1_E01_13_1 | cell | 69 | warn | high_border_fraction | 0.318841 | 1.32692 | 0.970553 | 0.381818 | 24.2484 | 0.013656 | 21,186 | 164.24 | 47 | 0 | 0.942029 | 0 | 69 cell(s), median diameter 164.2 px, 32% on the border, foreground 38.2%. 32% of objects touch the field edge, so their crops will be truncated. |
plate1_E01_14_1 | cell | 57 | ok | null | 0.140351 | 1.09615 | 0.998307 | 0.314163 | 20.2476 | 0.012621 | 22,415 | 168.937 | 49 | 0.102041 | null | 0.020408 | 57 cell(s), median diameter 168.9 px, 14% on the border, foreground 31.4%. Nothing wrong with this field. |
plate1_E01_16_1 | cell | 27 | ok | null | 0.296296 | 0.519231 | 1.19055 | 0.231224 | 17.3767 | 0.023612 | 31,879 | 201.469 | 19 | 0 | null | 0 | 27 cell(s), median diameter 201.5 px, 30% on the border, foreground 23.1%. Nothing wrong with this field. |
plate1_E01_17_1 | cell | 22 | warn | high_border_fraction | 0.363636 | 0.423077 | 1.17374 | 0.143343 | 39.606 | 0.012346 | 31,104 | 198.624 | 14 | 0 | null | 0 | 22 cell(s), median diameter 198.6 px, 36% on the border, foreground 14.3%. 36% of objects touch the field edge, so their crops will be truncated. |
plate1_E01_18_1 | cell | 62 | ok | null | 0.209677 | 1.19231 | 0.864372 | 0.259792 | 28.8704 | 0.01419 | 16,804 | 146.272 | 49 | 0 | null | 0 | 62 cell(s), median diameter 146.3 px, 21% on the border, foreground 26.0%. Nothing wrong with this field. |
plate1_E01_19_1 | cell | 27 | ok | null | 0.148148 | 0.519231 | 1.07224 | 0.178762 | 38.0876 | 0.01467 | 25,858 | 181.448 | 23 | 0 | null | 0 | 27 cell(s), median diameter 181.4 px, 15% on the border, foreground 17.9%. Nothing wrong with this field. |
plate1_E01_1_1 | cell | 44 | ok | null | 0.227273 | 0.846154 | 0.900005 | 0.206386 | 41.3547 | 0.018675 | 18,218 | 152.302 | 34 | 0 | null | 0 | 44 cell(s), median diameter 152.3 px, 23% on the border, foreground 20.6%. Nothing wrong with this field. |
plate1_E01_20_1 | cell | 83 | ok | null | 0.253012 | 1.59615 | 0.871606 | 0.356764 | 26.3656 | 0.018805 | 17,089 | 147.496 | 62 | 0 | 0.819277 | 0 | 83 cell(s), median diameter 147.5 px, 25% on the border, foreground 35.7%. Nothing wrong with this field. |
plate1_E01_21_1 | cell | 68 | ok | null | 0.161765 | 1.30769 | 1.01074 | 0.396382 | 27.2186 | 0.015004 | 22,977 | 171.042 | 57 | 0 | 0.970588 | 0 | 68 cell(s), median diameter 171.0 px, 16% on the border, foreground 39.6%. Nothing wrong with this field. |
plate1_E01_9_1 | cell | 65 | warn | high_border_fraction | 0.307692 | 1.25 | 1.04745 | 0.382435 | 27.3951 | 0.017866 | 24,676 | 177.253 | 45 | 0 | 0.953846 | 0 | 65 cell(s), median diameter 177.3 px, 31% on the border, foreground 38.2%. 31% of objects touch the field edge, so their crops will be truncated. |
plate1_E02_10_1 | cell | 41 | ok | null | 0.292683 | 0.788462 | 1.092 | 0.275378 | 39.8628 | 0.016816 | 26,820 | 184.793 | 29 | 0 | null | 0 | 41 cell(s), median diameter 184.8 px, 29% on the border, foreground 27.5%. Nothing wrong with this field. |
plate1_E02_11_1 | cell | 32 | ok | null | 0.21875 | 0.615385 | 1.13567 | 0.189347 | 25.011 | 0.013903 | 29,008 | 192.183 | 25 | 0 | null | 0 | 32 cell(s), median diameter 192.2 px, 22% on the border, foreground 18.9%. Nothing wrong with this field. |
plate1_E02_12_1 | cell | 50 | warn | high_border_fraction | 0.32 | 0.961538 | 1.06849 | 0.321454 | 24.8445 | 0.014971 | 25,682 | 180.813 | 34 | 0 | null | 0 | 50 cell(s), median diameter 180.8 px, 32% on the border, foreground 32.1%. 32% of objects touch the field edge, so their crops will be truncated. |
plate1_E02_13_1 | cell | 70 | ok | null | 0.185714 | 1.34615 | 1.00006 | 0.389544 | 17.1533 | 0.014742 | 22,494 | 169.234 | 57 | 0 | 0.942857 | 0 | 70 cell(s), median diameter 169.2 px, 19% on the border, foreground 39.0%. Nothing wrong with this field. |
plate1_E02_14_1 | cell | 43 | warn | high_border_fraction | 0.372093 | 0.826923 | 0.931778 | 0.179219 | 24.071 | 0.015381 | 19,527 | 157.679 | 27 | 0 | null | 0 | 43 cell(s), median diameter 157.7 px, 37% on the border, foreground 17.9%. 37% of objects touch the field edge, so their crops will be truncated. |
plate1_E02_16_1 | cell | 61 | ok | null | 0.295082 | 1.17308 | 1.07214 | 0.369724 | 26.0376 | 0.016944 | 25,853 | 181.431 | 43 | 0 | 0.852459 | 0.023256 | 61 cell(s), median diameter 181.4 px, 30% on the border, foreground 37.0%. Nothing wrong with this field. |
plate1_E02_17_1 | cell | 47 | ok | null | 0.234043 | 0.903846 | 1.13308 | 0.324556 | 24.3114 | 0.019596 | 28,876 | 191.744 | 36 | 0 | null | 0 | 47 cell(s), median diameter 191.7 px, 23% on the border, foreground 32.5%. Nothing wrong with this field. |
plate1_E02_18_1 | cell | 86 | ok | null | 0.267442 | 1.65385 | 0.958637 | 0.421876 | 28.0748 | 0.01574 | 20,669 | 162.224 | 63 | 0 | 0.872093 | 0 | 86 cell(s), median diameter 162.2 px, 27% on the border, foreground 42.2%. Nothing wrong with this field. |
plate1_E02_19_1 | cell | 43 | ok | null | 0.209302 | 0.826923 | 0.897543 | 0.222786 | 34.4472 | 0.02366 | 18,125 | 151.885 | 34 | 0 | null | 0.029412 | 43 cell(s), median diameter 151.9 px, 21% on the border, foreground 22.3%. Nothing wrong with this field. |
plate1_E02_1_1 | cell | 29 | warn | high_border_fraction | 0.310345 | 0.557692 | 0.992857 | 0.157048 | 38.9553 | 0.01228 | 22,173.5 | 168.015 | 20 | 0 | null | 0 | 29 cell(s), median diameter 168.0 px, 31% on the border, foreground 15.7%. 31% of objects touch the field edge, so their crops will be truncated. |
plate1_E02_20_1 | cell | 91 | ok | null | 0.186813 | 1.75 | 0.913465 | 0.461504 | 22.9587 | 0.011833 | 18,767 | 154.58 | 74 | 0 | 0.78022 | 0 | 91 cell(s), median diameter 154.6 px, 19% on the border, foreground 46.2%. Nothing wrong with this field. |
plate1_E02_21_1 | cell | 77 | ok | null | 0.246753 | 1.48077 | 0.95558 | 0.415482 | 30.2954 | 0.016258 | 20,538.5 | 161.706 | 58 | 0 | 0.792208 | 0 | 77 cell(s), median diameter 161.7 px, 25% on the border, foreground 41.5%. Nothing wrong with this field. |
plate1_E02_9_1 | cell | 17 | ok | null | 0.117647 | 0.326923 | 1.08215 | 0.111788 | 21.8464 | 0.013014 | 26,338 | 183.125 | 15 | 0 | null | 0 | 17 cell(s), median diameter 183.1 px, 12% on the border, foreground 11.2%. Nothing wrong with this field. |
plate1_L01_10_1 | cell | 68 | ok | null | 0.294118 | 1.30769 | 1.0742 | 0.380035 | 29.8382 | 0.010941 | 25,955.5 | 181.779 | 48 | 0 | 0.882353 | 0 | 68 cell(s), median diameter 181.8 px, 29% on the border, foreground 38.0%. Nothing wrong with this field. |
plate1_L01_11_1 | cell | 53 | warn | high_border_fraction | 0.358491 | 1.01923 | 1.09971 | 0.356687 | 35.8789 | 0.021524 | 27,201 | 186.097 | 34 | 0 | 0.981132 | 0 | 53 cell(s), median diameter 186.1 px, 36% on the border, foreground 35.7%. 36% of objects touch the field edge, so their crops will be truncated. |
plate1_L01_12_1 | cell | 65 | ok | null | 0.246154 | 1.25 | 0.980171 | 0.346111 | 31.766 | 0.015421 | 21,608 | 165.868 | 49 | 0 | null | 0 | 65 cell(s), median diameter 165.9 px, 25% on the border, foreground 34.6%. Nothing wrong with this field. |
plate1_L01_13_1 | cell | 79 | ok | null | 0.265823 | 1.51923 | 1.02339 | 0.411435 | 49.6036 | 0.01249 | 23,556 | 173.182 | 58 | 0 | 0.886076 | 0 | 79 cell(s), median diameter 173.2 px, 27% on the border, foreground 41.1%. Nothing wrong with this field. |
plate1_L01_14_1 | cell | 57 | warn | high_border_fraction | 0.421053 | 1.09615 | 0.995095 | 0.313201 | 29.6899 | 0.011315 | 22,271 | 168.393 | 33 | 0 | null | 0 | 57 cell(s), median diameter 168.4 px, 42% on the border, foreground 31.3%. 42% of objects touch the field edge, so their crops will be truncated. |
plate1_L01_16_1 | cell | 38 | ok | null | 0.263158 | 0.730769 | 1.07813 | 0.218447 | 27.2904 | 0.01318 | 26,143 | 182.445 | 28 | 0 | null | 0 | 38 cell(s), median diameter 182.4 px, 26% on the border, foreground 21.8%. Nothing wrong with this field. |
plate1_L01_17_1 | cell | 48 | ok | null | 0.208333 | 0.923077 | 0.841959 | 0.22017 | 41.9854 | 0.015923 | 15,944 | 142.479 | 38 | 0 | null | 0 | 48 cell(s), median diameter 142.5 px, 21% on the border, foreground 22.0%. Nothing wrong with this field. |
plate1_L01_18_1 | cell | 64 | ok | null | 0.21875 | 1.23077 | 0.90829 | 0.316474 | 30.5857 | 0.013962 | 18,555 | 153.704 | 50 | 0 | null | 0 | 64 cell(s), median diameter 153.7 px, 22% on the border, foreground 31.6%. Nothing wrong with this field. |
plate1_L01_19_1 | cell | 42 | ok | null | 0.261905 | 0.807692 | 1.04696 | 0.224387 | 26.4141 | 0.010028 | 24,653 | 177.17 | 31 | 0 | null | 0 | 42 cell(s), median diameter 177.2 px, 26% on the border, foreground 22.4%. Nothing wrong with this field. |
plate1_L01_1_1 | cell | 18 | warn | high_border_fraction | 0.444444 | 0.346154 | 0.999936 | 0.079455 | 21.8616 | 0.009542 | 22,528.5 | 169.213 | 10 | 0 | null | 0 | 18 cell(s), median diameter 169.2 px, 44% on the border, foreground 7.9%. 44% of objects touch the field edge, so their crops will be truncated. |
plate1_L01_20_1 | cell | 89 | ok | null | 0.224719 | 1.71154 | 0.896019 | 0.433539 | 41.2891 | 0.020522 | 18,057 | 151.627 | 69 | 0 | 0.932584 | 0.028986 | 89 cell(s), median diameter 151.6 px, 22% on the border, foreground 43.4%. Nothing wrong with this field. |
plate1_L01_21_1 | cell | 97 | ok | null | 0.206186 | 1.86538 | 0.873175 | 0.479569 | 26.583 | 0.023344 | 17,148 | 147.762 | 77 | 0 | 0.845361 | 0 | 97 cell(s), median diameter 147.8 px, 21% on the border, foreground 48.0%. Nothing wrong with this field. |
plate1_L01_9_1 | cell | 71 | ok | null | 0.267606 | 1.36538 | 0.984871 | 0.37205 | 25.9114 | 0.025842 | 21,816 | 166.663 | 52 | 0.019231 | 0.915493 | 0 | 71 cell(s), median diameter 166.7 px, 27% on the border, foreground 37.2%. Nothing wrong with this field. |
plate1_L02_10_1 | cell | 64 | ok | null | 0.1875 | 1.23077 | 0.941207 | 0.318841 | 36.2114 | 0.013774 | 19,926 | 159.274 | 52 | 0 | null | 0 | 64 cell(s), median diameter 159.3 px, 19% on the border, foreground 31.9%. Nothing wrong with this field. |
plate1_L02_11_1 | cell | 30 | warn | high_border_fraction | 0.433333 | 0.576923 | 1.10574 | 0.146568 | 18.6505 | 0.009895 | 27,499 | 187.117 | 17 | 0.058824 | null | 0 | 30 cell(s), median diameter 187.1 px, 43% on the border, foreground 14.7%. 43% of objects touch the field edge, so their crops will be truncated. |
plate1_L02_12_1 | cell | 38 | warn | high_border_fraction | 0.315789 | 0.730769 | 1.21702 | 0.283147 | 29.0251 | 0.016888 | 33,314 | 205.948 | 26 | 0 | null | 0 | 38 cell(s), median diameter 205.9 px, 32% on the border, foreground 28.3%. 32% of objects touch the field edge, so their crops will be truncated. |
plate1_L02_13_1 | cell | 62 | ok | null | 0.209677 | 1.19231 | 1.01037 | 0.302216 | 32.0868 | 0.01508 | 22,960 | 170.978 | 49 | 0 | null | 0 | 62 cell(s), median diameter 171.0 px, 21% on the border, foreground 30.2%. Nothing wrong with this field. |
plate1_L02_14_1 | cell | 31 | ok | null | 0.258065 | 0.596154 | 1.01686 | 0.169556 | 22.0704 | 0.012786 | 23,256 | 172.077 | 23 | 0 | null | 0 | 31 cell(s), median diameter 172.1 px, 26% on the border, foreground 17.0%. Nothing wrong with this field. |
plate1_L02_16_1 | cell | 37 | ok | null | 0.243243 | 0.711538 | 1.04857 | 0.223052 | 28.6596 | 0.01874 | 24,735 | 177.443 | 28 | 0 | null | 0 | 37 cell(s), median diameter 177.4 px, 24% on the border, foreground 22.3%. Nothing wrong with this field. |
plate1_L02_17_1 | cell | 22 | ok | null | 0.272727 | 0.423077 | 0.91506 | 0.085876 | 62.8753 | 0.009479 | 18,833.5 | 154.85 | 16 | 0 | null | 0 | 22 cell(s), median diameter 154.8 px, 27% on the border, foreground 8.6%. Nothing wrong with this field. |
plate1_L02_18_1 | cell | 54 | ok | null | 0.240741 | 1.03846 | 0.89659 | 0.241031 | 28.0648 | 0.018483 | 18,080 | 151.724 | 41 | 0 | null | 0 | 54 cell(s), median diameter 151.7 px, 24% on the border, foreground 24.1%. Nothing wrong with this field. |
plate1_L02_19_1 | cell | 41 | ok | null | 0.146341 | 0.788462 | 0.994178 | 0.220652 | 25.7673 | 0.012359 | 22,230 | 168.238 | 35 | 0 | null | 0 | 41 cell(s), median diameter 168.2 px, 15% on the border, foreground 22.1%. Nothing wrong with this field. |
plate1_L02_1_1 | cell | 30 | warn | high_border_fraction | 0.366667 | 0.576923 | 1.10155 | 0.149602 | 15.1427 | 0.015447 | 27,291 | 186.408 | 19 | 0.105263 | null | 0 | 30 cell(s), median diameter 186.4 px, 37% on the border, foreground 15.0%. 37% of objects touch the field edge, so their crops will be truncated. |
plate1_L02_20_1 | cell | 80 | ok | null | 0.2 | 1.53846 | 0.801138 | 0.318923 | 29.1469 | 0.009402 | 14,435.5 | 135.571 | 64 | 0 | null | 0 | 80 cell(s), median diameter 135.6 px, 20% on the border, foreground 31.9%. Nothing wrong with this field. |
plate1_L02_21_1 | cell | 51 | warn | high_border_fraction | 0.352941 | 0.980769 | 0.746189 | 0.180667 | 28.0907 | 0.012143 | 12,523 | 126.273 | 33 | 0 | null | 0 | 51 cell(s), median diameter 126.3 px, 35% on the border, foreground 18.1%. 35% of objects touch the field edge, so their crops will be truncated. |
plate1_L02_9_1 | cell | 59 | ok | null | 0.288136 | 1.13462 | 0.998889 | 0.308109 | 26.0527 | 0.011133 | 22,461.5 | 169.035 | 42 | 0 | null | 0 | 59 cell(s), median diameter 169.0 px, 29% on the border, foreground 30.8%. Nothing wrong with this field. |
plate1_E01_10_1 | nucleus | 65 | ok | null | 0.169231 | 1.13043 | 1.06201 | 0.11671 | 13.0716 | 0.003069 | 7,925.5 | 100.454 | 54 | 0 | null | 0 | 65 nucleus(s), median diameter 100.5 px, 17% on the border, foreground 11.7%. Nothing wrong with this field. |
plate1_E01_11_1 | nucleus | 48 | ok | null | 0.125 | 0.834783 | 1.08222 | 0.089125 | 9.93937 | 0.003099 | 8,230 | 102.366 | 42 | 0 | null | 0 | 48 nucleus(s), median diameter 102.4 px, 12% on the border, foreground 8.9%. Nothing wrong with this field. |
plate1_E01_12_1 | nucleus | 39 | ok | null | 0.282051 | 0.678261 | 1.14502 | 0.083769 | 13.6046 | 0.003583 | 9,215 | 108.306 | 28 | 0 | null | 0 | 39 nucleus(s), median diameter 108.3 px, 28% on the border, foreground 8.4%. Nothing wrong with this field. |
plate1_E01_13_1 | nucleus | 73 | ok | null | 0.164384 | 1.26957 | 1.00114 | 0.123165 | 12.0625 | 0.004064 | 7,043 | 94.6965 | 61 | 0 | null | 0 | 73 nucleus(s), median diameter 94.7 px, 16% on the border, foreground 12.3%. Nothing wrong with this field. |
plate1_E01_14_1 | nucleus | 53 | ok | null | 0.09434 | 0.921739 | 1.07615 | 0.101729 | 8.94551 | 0.00346 | 8,138 | 101.792 | 48 | 0.0625 | null | 0 | 53 nucleus(s), median diameter 101.8 px, 9% on the border, foreground 10.2%. Nothing wrong with this field. |
plate1_E01_16_1 | nucleus | 27 | ok | null | 0.074074 | 0.469565 | 1.15696 | 0.063336 | 10.807 | 0.004872 | 9,406 | 109.435 | 25 | 0.08 | null | 0 | 27 nucleus(s), median diameter 109.4 px, 7% on the border, foreground 6.3%. Nothing wrong with this field. |
plate1_E01_17_1 | nucleus | 24 | ok | null | 0.125 | 0.417391 | 1.0349 | 0.043551 | 16.756 | 0.003272 | 7,526 | 97.8897 | 21 | 0 | null | 0.047619 | 24 nucleus(s), median diameter 97.9 px, 12% on the border, foreground 4.4%. Nothing wrong with this field. |
plate1_E01_18_1 | nucleus | 57 | ok | null | 0.087719 | 0.991304 | 0.945071 | 0.084645 | 13.3258 | 0.003422 | 6,276.5 | 89.3931 | 52 | 0 | null | 0 | 57 nucleus(s), median diameter 89.4 px, 9% on the border, foreground 8.5%. Nothing wrong with this field. |
plate1_E01_19_1 | nucleus | 29 | ok | null | 0.103448 | 0.504348 | 1.03002 | 0.0499 | 10.8194 | 0.00394 | 7,456.5 | 97.4288 | 26 | 0.038462 | null | 0.038462 | 29 nucleus(s), median diameter 97.4 px, 10% on the border, foreground 5.0%. Nothing wrong with this field. |
plate1_E01_1_1 | nucleus | 49 | ok | null | 0.061225 | 0.852174 | 0.902428 | 0.065492 | 18.1101 | 0.003952 | 5,723 | 85.3596 | 46 | 0 | null | 0.021739 | 49 nucleus(s), median diameter 85.4 px, 6% on the border, foreground 6.5%. Nothing wrong with this field. |
plate1_E01_20_1 | nucleus | 95 | ok | null | 0.157895 | 1.65217 | 0.907569 | 0.121297 | 14.2973 | 0.004439 | 5,788 | 85.8459 | 80 | 0 | null | 0.0125 | 95 nucleus(s), median diameter 85.8 px, 16% on the border, foreground 12.1%. Nothing wrong with this field. |
plate1_E01_21_1 | nucleus | 65 | ok | null | 0.123077 | 1.13043 | 1.02238 | 0.124227 | 10.3052 | 0.003704 | 7,345 | 96.7055 | 57 | 0 | null | 0 | 65 nucleus(s), median diameter 96.7 px, 12% on the border, foreground 12.4%. Nothing wrong with this field. |
plate1_E01_9_1 | nucleus | 64 | ok | null | 0.1875 | 1.11304 | 1.06187 | 0.122818 | 8.09563 | 0.004042 | 7,923.5 | 100.441 | 52 | 0.038462 | null | 0 | 64 nucleus(s), median diameter 100.4 px, 19% on the border, foreground 12.3%. Nothing wrong with this field. |
plate1_E02_10_1 | nucleus | 46 | ok | null | 0.130435 | 0.8 | 1.03531 | 0.082639 | 15.4027 | 0.003785 | 7,532 | 97.9286 | 40 | 0 | null | 0 | 46 nucleus(s), median diameter 97.9 px, 13% on the border, foreground 8.3%. Nothing wrong with this field. |
plate1_E02_11_1 | nucleus | 37 | ok | null | 0.081081 | 0.643478 | 0.94866 | 0.051726 | 9.15703 | 0.003329 | 6,324 | 89.7326 | 34 | 0.058824 | null | 0 | 37 nucleus(s), median diameter 89.7 px, 8% on the border, foreground 5.2%. Nothing wrong with this field. |
plate1_E02_12_1 | nucleus | 55 | ok | null | 0.145455 | 0.956522 | 1.02342 | 0.09434 | 12.8024 | 0.004292 | 7,360 | 96.8041 | 47 | 0 | null | 0 | 55 nucleus(s), median diameter 96.8 px, 15% on the border, foreground 9.4%. Nothing wrong with this field. |
plate1_E02_13_1 | nucleus | 78 | ok | null | 0.128205 | 1.35652 | 0.991533 | 0.123301 | 7.89354 | 0.002928 | 6,908.5 | 93.7879 | 68 | 0.058824 | null | 0 | 78 nucleus(s), median diameter 93.8 px, 13% on the border, foreground 12.3%. Nothing wrong with this field. |
plate1_E02_14_1 | nucleus | 41 | ok | null | 0.219512 | 0.713043 | 0.958941 | 0.054442 | 28.6818 | 0.003165 | 6,465 | 90.7051 | 32 | 0 | null | 0.03125 | 41 nucleus(s), median diameter 90.7 px, 22% on the border, foreground 5.4%. Nothing wrong with this field. |
plate1_E02_16_1 | nucleus | 59 | ok | null | 0.135593 | 1.02609 | 1.06398 | 0.106897 | 10.4456 | 0.004014 | 7,955 | 100.641 | 51 | 0.019608 | null | 0 | 59 nucleus(s), median diameter 100.6 px, 14% on the border, foreground 10.7%. Nothing wrong with this field. |
plate1_E02_17_1 | nucleus | 66 | ok | null | 0.075758 | 1.14783 | 0.964358 | 0.091151 | 24.8538 | 0.00395 | 6,535 | 91.2174 | 61 | 0 | null | 0 | 66 nucleus(s), median diameter 91.2 px, 8% on the border, foreground 9.1%. Nothing wrong with this field. |
plate1_E02_18_1 | nucleus | 83 | ok | null | 0.180723 | 1.44348 | 0.99736 | 0.130001 | 9.00069 | 0.003473 | 6,990 | 94.3391 | 68 | 0.029412 | null | 0 | 83 nucleus(s), median diameter 94.3 px, 18% on the border, foreground 13.0%. Nothing wrong with this field. |
plate1_E02_19_1 | nucleus | 39 | ok | null | 0.128205 | 0.678261 | 0.964655 | 0.069565 | 12.2888 | 0.005007 | 6,540 | 91.2456 | 34 | 0 | null | 0 | 39 nucleus(s), median diameter 91.2 px, 13% on the border, foreground 7.0%. Nothing wrong with this field. |
plate1_E02_1_1 | nucleus | 43 | ok | null | 0.116279 | 0.747826 | 0.648036 | 0.048003 | 44.7897 | 0.002778 | 2,954.5 | 61.297 | 38 | 0 | null | 0 | 43 nucleus(s), median diameter 61.3 px, 12% on the border, foreground 4.8%. Nothing wrong with this field. |
plate1_E02_20_1 | nucleus | 102 | ok | null | 0.068628 | 1.77391 | 0.970756 | 0.168665 | 11.7488 | 0.00539 | 6,622 | 91.8226 | 95 | 0 | null | 0 | 102 nucleus(s), median diameter 91.8 px, 7% on the border, foreground 16.9%. Nothing wrong with this field. |
plate1_E02_21_1 | nucleus | 73 | ok | null | 0.178082 | 1.26957 | 1.04735 | 0.132218 | 10.7624 | 0.003689 | 7,708.5 | 99.0672 | 60 | 0.05 | null | 0 | 73 nucleus(s), median diameter 99.1 px, 18% on the border, foreground 13.2%. Nothing wrong with this field. |
plate1_E02_9_1 | nucleus | 19 | ok | null | 0.105263 | 0.330435 | 1.03524 | 0.030871 | 11.7571 | 0.003125 | 7,531 | 97.9222 | 17 | 0 | null | 0 | 19 nucleus(s), median diameter 97.9 px, 11% on the border, foreground 3.1%. Nothing wrong with this field. |
plate1_L01_10_1 | nucleus | 82 | ok | null | 0.170732 | 1.42609 | 1.01581 | 0.128967 | 13.8351 | 0.003685 | 7,251 | 96.0846 | 68 | 0 | null | 0 | 82 nucleus(s), median diameter 96.1 px, 17% on the border, foreground 12.9%. Nothing wrong with this field. |
plate1_L01_11_1 | nucleus | 58 | ok | null | 0.189655 | 1.0087 | 1.05052 | 0.106577 | 13.2668 | 0.003517 | 7,755 | 99.3679 | 47 | 0 | null | 0 | 58 nucleus(s), median diameter 99.4 px, 19% on the border, foreground 10.7%. Nothing wrong with this field. |
plate1_L01_12_1 | nucleus | 60 | ok | null | 0.216667 | 1.04348 | 1.10332 | 0.115778 | 12.8327 | 0.003917 | 8,554 | 104.361 | 47 | 0 | null | 0 | 60 nucleus(s), median diameter 104.4 px, 22% on the border, foreground 11.6%. Nothing wrong with this field. |
plate1_L01_13_1 | nucleus | 69 | ok | null | 0.130435 | 1.2 | 1.09324 | 0.129246 | 15.264 | 0.0036 | 8,399 | 103.409 | 60 | 0 | null | 0 | 69 nucleus(s), median diameter 103.4 px, 13% on the border, foreground 12.9%. Nothing wrong with this field. |
plate1_L01_14_1 | nucleus | 63 | ok | null | 0.222222 | 1.09565 | 1.03421 | 0.103857 | 12.7853 | 0.0031 | 7,516 | 97.8247 | 49 | 0 | null | 0 | 63 nucleus(s), median diameter 97.8 px, 22% on the border, foreground 10.4%. Nothing wrong with this field. |
plate1_L01_16_1 | nucleus | 54 | ok | null | 0.148148 | 0.93913 | 1.00811 | 0.069117 | 25.7262 | 0.003669 | 7,141.5 | 95.3564 | 46 | 0 | null | 0.021739 | 54 nucleus(s), median diameter 95.4 px, 15% on the border, foreground 6.9%. Nothing wrong with this field. |
plate1_L01_17_1 | nucleus | 41 | ok | null | 0.170732 | 0.713043 | 0.947595 | 0.069715 | 18.0509 | 0.003858 | 6,311 | 89.6319 | 34 | 0 | null | 0 | 41 nucleus(s), median diameter 89.6 px, 17% on the border, foreground 7.0%. Nothing wrong with this field. |
plate1_L01_18_1 | nucleus | 65 | ok | null | 0.153846 | 1.13043 | 0.928955 | 0.095147 | 11.2636 | 0.003194 | 6,064 | 87.8688 | 55 | 0 | null | 0 | 65 nucleus(s), median diameter 87.9 px, 15% on the border, foreground 9.5%. Nothing wrong with this field. |
plate1_L01_19_1 | nucleus | 53 | ok | null | 0.169811 | 0.921739 | 1.00464 | 0.074589 | 12.5177 | 0.002698 | 7,092.5 | 95.0274 | 44 | 0 | null | 0.045455 | 53 nucleus(s), median diameter 95.0 px, 17% on the border, foreground 7.5%. Nothing wrong with this field. |
plate1_L01_1_1 | nucleus | 19 | ok | null | 0.157895 | 0.330435 | 0.976315 | 0.027329 | 12.4014 | 0.002894 | 6,706.5 | 92.3484 | 16 | 0 | null | 0 | 19 nucleus(s), median diameter 92.3 px, 16% on the border, foreground 2.7%. Nothing wrong with this field. |
plate1_L01_20_1 | nucleus | 87 | ok | null | 0.16092 | 1.51304 | 0.998862 | 0.138821 | 17.6767 | 0.004245 | 7,011 | 94.4811 | 73 | 0 | null | 0.013699 | 87 nucleus(s), median diameter 94.5 px, 16% on the border, foreground 13.9%. Nothing wrong with this field. |
plate1_L01_21_1 | nucleus | 95 | ok | null | 0.126316 | 1.65217 | 0.977403 | 0.155737 | 9.60926 | 0.004503 | 6,713 | 92.4514 | 83 | 0.048193 | null | 0 | 95 nucleus(s), median diameter 92.5 px, 13% on the border, foreground 15.6%. Nothing wrong with this field. |
plate1_L01_9_1 | nucleus | 72 | ok | null | 0.138889 | 1.25217 | 1.03097 | 0.123011 | 10.6082 | 0.006017 | 7,469 | 97.5183 | 62 | 0.080645 | null | 0 | 72 nucleus(s), median diameter 97.5 px, 14% on the border, foreground 12.3%. Nothing wrong with this field. |
plate1_L02_10_1 | nucleus | 83 | ok | null | 0.048193 | 1.44348 | 0.856006 | 0.098945 | 37.8118 | 0.003474 | 5,149 | 80.9686 | 79 | 0 | null | 0.025317 | 83 nucleus(s), median diameter 81.0 px, 5% on the border, foreground 9.9%. Nothing wrong with this field. |
plate1_L02_11_1 | nucleus | 30 | warn | size_outliers | 0.133333 | 0.521739 | 1.04812 | 0.039965 | 10.556 | 0.002615 | 7,719.5 | 99.1401 | 26 | 0.230769 | null | 0.115385 | 30 nucleus(s), median diameter 99.1 px, 13% on the border, foreground 4.0%. 23% of objects fall outside the robust size range 20.9-177.4 px (median 99.1 px, MAD 10.56), which a single population cannot do. |
plate1_L02_12_1 | nucleus | 92 | fail | over_segmented | 0.076087 | 1.6 | 0.272292 | 0.085235 | 17.0885 | 0.004191 | 521 | 25.7557 | 85 | 0 | null | 0 | 92 nucleus(s), median diameter 25.8 px, 8% on the border, foreground 8.5%. Nothing wrong with this field. objects are 0.27x the plate's median diameter at 1.6x its count, the signature of objects split apart. |
plate1_L02_13_1 | nucleus | 86 | ok | null | 0.151163 | 1.49565 | 0.815916 | 0.093238 | 36.1961 | 0.003744 | 4,678 | 77.1765 | 73 | 0 | null | 0 | 86 nucleus(s), median diameter 77.2 px, 15% on the border, foreground 9.3%. Nothing wrong with this field. |
plate1_L02_14_1 | nucleus | 63 | warn | size_outliers | 0.126984 | 1.09565 | 0.176538 | 0.051919 | 6.60596 | 0.00277 | 219 | 16.6985 | 55 | 0.363636 | null | 0.018182 | 63 nucleus(s), median diameter 16.7 px, 13% on the border, foreground 5.2%. 36% of objects fall outside the robust size range -32.3-65.7 px (median 16.7 px, MAD 6.61), which a single population cannot do. |
plate1_L02_16_1 | nucleus | 39 | ok | null | 0.179487 | 0.678261 | 1.04468 | 0.067703 | 12.3122 | 0.004443 | 7,669 | 98.8154 | 32 | 0 | null | 0 | 39 nucleus(s), median diameter 98.8 px, 18% on the border, foreground 6.8%. Nothing wrong with this field. |
plate1_L02_17_1 | nucleus | 18 | ok | null | 0.222222 | 0.313043 | 0.980005 | 0.028868 | 4.50692 | 0.002762 | 6,749 | 92.6975 | 14 | 0.071429 | null | 0 | 18 nucleus(s), median diameter 92.7 px, 22% on the border, foreground 2.9%. Nothing wrong with this field. |
plate1_L02_18_1 | nucleus | 56 | ok | null | 0.196429 | 0.973913 | 0.927652 | 0.081748 | 11.7075 | 0.003172 | 6,047 | 87.7455 | 45 | 0 | null | 0 | 56 nucleus(s), median diameter 87.7 px, 20% on the border, foreground 8.2%. Nothing wrong with this field. |
plate1_L02_19_1 | nucleus | 50 | ok | null | 0.06 | 0.869565 | 0.945732 | 0.068949 | 17.7107 | 0.002984 | 6,285 | 89.4556 | 47 | 0 | null | 0.021277 | 50 nucleus(s), median diameter 89.5 px, 6% on the border, foreground 6.9%. Nothing wrong with this field. |
End of preview.