The full dataset viewer is not available (click to read why). Only showing a preview of the rows.
The dataset generation failed because of a cast error
Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 2 new columns ({'Value', 'Key'}) and 18 missing columns ({'field', 'border_fraction', 'max_object_fraction', 'object_type', 'tiny_fraction', 'diameter_ratio', 'foreground_fraction', 'median_diameter', 'outlier_fraction', 'severity', 'n_objects', 'flags', 'median_area', 'count_ratio', 'mad_diameter', 'note', 'n_interior', 'split_ratio'}).

This happened while the csv dataset builder was generating data using

hf://datasets/einarolafsson/spacr-example-measure/settings/gen_mask_settings.csv (at revision 636ea1d1fa44bb00d0be9961f3bb4121ff48a835), ['hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_cell.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_nucleus.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_pathogen.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/settings/gen_mask_settings.csv']

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1848, in _prepare_split_single
                  writer.write_table(table)
                  ~~~~~~~~~~~~~~~~~~^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 765, in write_table
                  self._write_table(pa_table, writer_batch_size=writer_batch_size)
                  ~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 773, in _write_table
                  pa_table = table_cast(pa_table, self._schema)
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2378, in table_cast
                  return cast_table_to_schema(table, schema)
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2306, in cast_table_to_schema
                  raise CastError(
                  ...<3 lines>...
                  )
              datasets.table.CastError: Couldn't cast
              Key: string
              Value: string
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 495
              to
              {'field': Value('string'), 'object_type': Value('string'), 'n_objects': Value('int64'), 'severity': Value('string'), 'flags': Value('string'), 'border_fraction': Value('float64'), 'count_ratio': Value('float64'), 'diameter_ratio': Value('float64'), 'foreground_fraction': Value('float64'), 'mad_diameter': Value('float64'), 'max_object_fraction': Value('float64'), 'median_area': Value('float64'), 'median_diameter': Value('float64'), 'n_interior': Value('int64'), 'outlier_fraction': Value('float64'), 'split_ratio': Value('float64'), 'tiny_fraction': Value('float64'), 'note': Value('string')}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1369, in compute_config_parquet_and_info_response
                  parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
                                                                        ~~~~~~~~~~~~~~~~~~~~~~~~~^
                      builder, max_dataset_size_bytes=max_dataset_size_bytes
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  )
                  ^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 948, in stream_convert_to_parquet
                  builder._prepare_split(split_generator=splits_generators[split], file_format="parquet")
                  ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1694, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ~~~~~~~~~~~~~~~~~~~~~~~~~~^
                      gen_kwargs=gen_kwargs, job_id=job_id, **_prepare_split_args
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  ):
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1850, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
                  ...<4 lines>...
                  )
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 2 new columns ({'Value', 'Key'}) and 18 missing columns ({'field', 'border_fraction', 'max_object_fraction', 'object_type', 'tiny_fraction', 'diameter_ratio', 'foreground_fraction', 'median_diameter', 'outlier_fraction', 'severity', 'n_objects', 'flags', 'median_area', 'count_ratio', 'mad_diameter', 'note', 'n_interior', 'split_ratio'}).
              
              This happened while the csv dataset builder was generating data using
              
              hf://datasets/einarolafsson/spacr-example-measure/settings/gen_mask_settings.csv (at revision 636ea1d1fa44bb00d0be9961f3bb4121ff48a835), ['hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_cell.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_nucleus.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/qc/segmentation_qc_pathogen.csv', 'hf://datasets/einarolafsson/spacr-example-measure@636ea1d1fa44bb00d0be9961f3bb4121ff48a835/settings/gen_mask_settings.csv']
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)

Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.

field
string
object_type
string
n_objects
int64
severity
string
flags
string
border_fraction
float64
count_ratio
float64
diameter_ratio
float64
foreground_fraction
float64
mad_diameter
float64
max_object_fraction
float64
median_area
float64
median_diameter
float64
n_interior
int64
outlier_fraction
float64
split_ratio
float64
tiny_fraction
float64
note
string
plate1_E01_10_1
cell
63
ok
null
0.238095
1.21154
1.03046
0.359142
26.6714
0.015218
23,882.5
174.378
48
0
1.01587
0
63 cell(s), median diameter 174.4 px, 24% on the border, foreground 35.9%. Nothing wrong with this field.
plate1_E01_11_1
cell
51
ok
null
0.235294
0.980769
1.07108
0.287782
23.0474
0.012302
25,802
181.252
39
0
null
0
51 cell(s), median diameter 181.3 px, 24% on the border, foreground 28.8%. Nothing wrong with this field.
plate1_E01_12_1
cell
40
warn
high_border_fraction
0.425
0.769231
1.21619
0.284499
29.8747
0.015875
33,267
205.808
23
0
null
0
40 cell(s), median diameter 205.8 px, 42% on the border, foreground 28.4%. 42% of objects touch the field edge, so their crops will be truncated.
plate1_E01_13_1
cell
69
warn
high_border_fraction
0.318841
1.32692
0.970553
0.381818
24.2484
0.013656
21,186
164.24
47
0
0.942029
0
69 cell(s), median diameter 164.2 px, 32% on the border, foreground 38.2%. 32% of objects touch the field edge, so their crops will be truncated.
plate1_E01_14_1
cell
57
ok
null
0.140351
1.09615
0.998307
0.314163
20.2476
0.012621
22,415
168.937
49
0.102041
null
0.020408
57 cell(s), median diameter 168.9 px, 14% on the border, foreground 31.4%. Nothing wrong with this field.
plate1_E01_16_1
cell
27
ok
null
0.296296
0.519231
1.19055
0.231224
17.3767
0.023612
31,879
201.469
19
0
null
0
27 cell(s), median diameter 201.5 px, 30% on the border, foreground 23.1%. Nothing wrong with this field.
plate1_E01_17_1
cell
22
warn
high_border_fraction
0.363636
0.423077
1.17374
0.143343
39.606
0.012346
31,104
198.624
14
0
null
0
22 cell(s), median diameter 198.6 px, 36% on the border, foreground 14.3%. 36% of objects touch the field edge, so their crops will be truncated.
plate1_E01_18_1
cell
62
ok
null
0.209677
1.19231
0.864372
0.259792
28.8704
0.01419
16,804
146.272
49
0
null
0
62 cell(s), median diameter 146.3 px, 21% on the border, foreground 26.0%. Nothing wrong with this field.
plate1_E01_19_1
cell
27
ok
null
0.148148
0.519231
1.07224
0.178762
38.0876
0.01467
25,858
181.448
23
0
null
0
27 cell(s), median diameter 181.4 px, 15% on the border, foreground 17.9%. Nothing wrong with this field.
plate1_E01_1_1
cell
44
ok
null
0.227273
0.846154
0.900005
0.206386
41.3547
0.018675
18,218
152.302
34
0
null
0
44 cell(s), median diameter 152.3 px, 23% on the border, foreground 20.6%. Nothing wrong with this field.
plate1_E01_20_1
cell
83
ok
null
0.253012
1.59615
0.871606
0.356764
26.3656
0.018805
17,089
147.496
62
0
0.819277
0
83 cell(s), median diameter 147.5 px, 25% on the border, foreground 35.7%. Nothing wrong with this field.
plate1_E01_21_1
cell
68
ok
null
0.161765
1.30769
1.01074
0.396382
27.2186
0.015004
22,977
171.042
57
0
0.970588
0
68 cell(s), median diameter 171.0 px, 16% on the border, foreground 39.6%. Nothing wrong with this field.
plate1_E01_9_1
cell
65
warn
high_border_fraction
0.307692
1.25
1.04745
0.382435
27.3951
0.017866
24,676
177.253
45
0
0.953846
0
65 cell(s), median diameter 177.3 px, 31% on the border, foreground 38.2%. 31% of objects touch the field edge, so their crops will be truncated.
plate1_E02_10_1
cell
41
ok
null
0.292683
0.788462
1.092
0.275378
39.8628
0.016816
26,820
184.793
29
0
null
0
41 cell(s), median diameter 184.8 px, 29% on the border, foreground 27.5%. Nothing wrong with this field.
plate1_E02_11_1
cell
32
ok
null
0.21875
0.615385
1.13567
0.189347
25.011
0.013903
29,008
192.183
25
0
null
0
32 cell(s), median diameter 192.2 px, 22% on the border, foreground 18.9%. Nothing wrong with this field.
plate1_E02_12_1
cell
50
warn
high_border_fraction
0.32
0.961538
1.06849
0.321454
24.8445
0.014971
25,682
180.813
34
0
null
0
50 cell(s), median diameter 180.8 px, 32% on the border, foreground 32.1%. 32% of objects touch the field edge, so their crops will be truncated.
plate1_E02_13_1
cell
70
ok
null
0.185714
1.34615
1.00006
0.389544
17.1533
0.014742
22,494
169.234
57
0
0.942857
0
70 cell(s), median diameter 169.2 px, 19% on the border, foreground 39.0%. Nothing wrong with this field.
plate1_E02_14_1
cell
43
warn
high_border_fraction
0.372093
0.826923
0.931778
0.179219
24.071
0.015381
19,527
157.679
27
0
null
0
43 cell(s), median diameter 157.7 px, 37% on the border, foreground 17.9%. 37% of objects touch the field edge, so their crops will be truncated.
plate1_E02_16_1
cell
61
ok
null
0.295082
1.17308
1.07214
0.369724
26.0376
0.016944
25,853
181.431
43
0
0.852459
0.023256
61 cell(s), median diameter 181.4 px, 30% on the border, foreground 37.0%. Nothing wrong with this field.
plate1_E02_17_1
cell
47
ok
null
0.234043
0.903846
1.13308
0.324556
24.3114
0.019596
28,876
191.744
36
0
null
0
47 cell(s), median diameter 191.7 px, 23% on the border, foreground 32.5%. Nothing wrong with this field.
plate1_E02_18_1
cell
86
ok
null
0.267442
1.65385
0.958637
0.421876
28.0748
0.01574
20,669
162.224
63
0
0.872093
0
86 cell(s), median diameter 162.2 px, 27% on the border, foreground 42.2%. Nothing wrong with this field.
plate1_E02_19_1
cell
43
ok
null
0.209302
0.826923
0.897543
0.222786
34.4472
0.02366
18,125
151.885
34
0
null
0.029412
43 cell(s), median diameter 151.9 px, 21% on the border, foreground 22.3%. Nothing wrong with this field.
plate1_E02_1_1
cell
29
warn
high_border_fraction
0.310345
0.557692
0.992857
0.157048
38.9553
0.01228
22,173.5
168.015
20
0
null
0
29 cell(s), median diameter 168.0 px, 31% on the border, foreground 15.7%. 31% of objects touch the field edge, so their crops will be truncated.
plate1_E02_20_1
cell
91
ok
null
0.186813
1.75
0.913465
0.461504
22.9587
0.011833
18,767
154.58
74
0
0.78022
0
91 cell(s), median diameter 154.6 px, 19% on the border, foreground 46.2%. Nothing wrong with this field.
plate1_E02_21_1
cell
77
ok
null
0.246753
1.48077
0.95558
0.415482
30.2954
0.016258
20,538.5
161.706
58
0
0.792208
0
77 cell(s), median diameter 161.7 px, 25% on the border, foreground 41.5%. Nothing wrong with this field.
plate1_E02_9_1
cell
17
ok
null
0.117647
0.326923
1.08215
0.111788
21.8464
0.013014
26,338
183.125
15
0
null
0
17 cell(s), median diameter 183.1 px, 12% on the border, foreground 11.2%. Nothing wrong with this field.
plate1_L01_10_1
cell
68
ok
null
0.294118
1.30769
1.0742
0.380035
29.8382
0.010941
25,955.5
181.779
48
0
0.882353
0
68 cell(s), median diameter 181.8 px, 29% on the border, foreground 38.0%. Nothing wrong with this field.
plate1_L01_11_1
cell
53
warn
high_border_fraction
0.358491
1.01923
1.09971
0.356687
35.8789
0.021524
27,201
186.097
34
0
0.981132
0
53 cell(s), median diameter 186.1 px, 36% on the border, foreground 35.7%. 36% of objects touch the field edge, so their crops will be truncated.
plate1_L01_12_1
cell
65
ok
null
0.246154
1.25
0.980171
0.346111
31.766
0.015421
21,608
165.868
49
0
null
0
65 cell(s), median diameter 165.9 px, 25% on the border, foreground 34.6%. Nothing wrong with this field.
plate1_L01_13_1
cell
79
ok
null
0.265823
1.51923
1.02339
0.411435
49.6036
0.01249
23,556
173.182
58
0
0.886076
0
79 cell(s), median diameter 173.2 px, 27% on the border, foreground 41.1%. Nothing wrong with this field.
plate1_L01_14_1
cell
57
warn
high_border_fraction
0.421053
1.09615
0.995095
0.313201
29.6899
0.011315
22,271
168.393
33
0
null
0
57 cell(s), median diameter 168.4 px, 42% on the border, foreground 31.3%. 42% of objects touch the field edge, so their crops will be truncated.
plate1_L01_16_1
cell
38
ok
null
0.263158
0.730769
1.07813
0.218447
27.2904
0.01318
26,143
182.445
28
0
null
0
38 cell(s), median diameter 182.4 px, 26% on the border, foreground 21.8%. Nothing wrong with this field.
plate1_L01_17_1
cell
48
ok
null
0.208333
0.923077
0.841959
0.22017
41.9854
0.015923
15,944
142.479
38
0
null
0
48 cell(s), median diameter 142.5 px, 21% on the border, foreground 22.0%. Nothing wrong with this field.
plate1_L01_18_1
cell
64
ok
null
0.21875
1.23077
0.90829
0.316474
30.5857
0.013962
18,555
153.704
50
0
null
0
64 cell(s), median diameter 153.7 px, 22% on the border, foreground 31.6%. Nothing wrong with this field.
plate1_L01_19_1
cell
42
ok
null
0.261905
0.807692
1.04696
0.224387
26.4141
0.010028
24,653
177.17
31
0
null
0
42 cell(s), median diameter 177.2 px, 26% on the border, foreground 22.4%. Nothing wrong with this field.
plate1_L01_1_1
cell
18
warn
high_border_fraction
0.444444
0.346154
0.999936
0.079455
21.8616
0.009542
22,528.5
169.213
10
0
null
0
18 cell(s), median diameter 169.2 px, 44% on the border, foreground 7.9%. 44% of objects touch the field edge, so their crops will be truncated.
plate1_L01_20_1
cell
89
ok
null
0.224719
1.71154
0.896019
0.433539
41.2891
0.020522
18,057
151.627
69
0
0.932584
0.028986
89 cell(s), median diameter 151.6 px, 22% on the border, foreground 43.4%. Nothing wrong with this field.
plate1_L01_21_1
cell
97
ok
null
0.206186
1.86538
0.873175
0.479569
26.583
0.023344
17,148
147.762
77
0
0.845361
0
97 cell(s), median diameter 147.8 px, 21% on the border, foreground 48.0%. Nothing wrong with this field.
plate1_L01_9_1
cell
71
ok
null
0.267606
1.36538
0.984871
0.37205
25.9114
0.025842
21,816
166.663
52
0.019231
0.915493
0
71 cell(s), median diameter 166.7 px, 27% on the border, foreground 37.2%. Nothing wrong with this field.
plate1_L02_10_1
cell
64
ok
null
0.1875
1.23077
0.941207
0.318841
36.2114
0.013774
19,926
159.274
52
0
null
0
64 cell(s), median diameter 159.3 px, 19% on the border, foreground 31.9%. Nothing wrong with this field.
plate1_L02_11_1
cell
30
warn
high_border_fraction
0.433333
0.576923
1.10574
0.146568
18.6505
0.009895
27,499
187.117
17
0.058824
null
0
30 cell(s), median diameter 187.1 px, 43% on the border, foreground 14.7%. 43% of objects touch the field edge, so their crops will be truncated.
plate1_L02_12_1
cell
38
warn
high_border_fraction
0.315789
0.730769
1.21702
0.283147
29.0251
0.016888
33,314
205.948
26
0
null
0
38 cell(s), median diameter 205.9 px, 32% on the border, foreground 28.3%. 32% of objects touch the field edge, so their crops will be truncated.
plate1_L02_13_1
cell
62
ok
null
0.209677
1.19231
1.01037
0.302216
32.0868
0.01508
22,960
170.978
49
0
null
0
62 cell(s), median diameter 171.0 px, 21% on the border, foreground 30.2%. Nothing wrong with this field.
plate1_L02_14_1
cell
31
ok
null
0.258065
0.596154
1.01686
0.169556
22.0704
0.012786
23,256
172.077
23
0
null
0
31 cell(s), median diameter 172.1 px, 26% on the border, foreground 17.0%. Nothing wrong with this field.
plate1_L02_16_1
cell
37
ok
null
0.243243
0.711538
1.04857
0.223052
28.6596
0.01874
24,735
177.443
28
0
null
0
37 cell(s), median diameter 177.4 px, 24% on the border, foreground 22.3%. Nothing wrong with this field.
plate1_L02_17_1
cell
22
ok
null
0.272727
0.423077
0.91506
0.085876
62.8753
0.009479
18,833.5
154.85
16
0
null
0
22 cell(s), median diameter 154.8 px, 27% on the border, foreground 8.6%. Nothing wrong with this field.
plate1_L02_18_1
cell
54
ok
null
0.240741
1.03846
0.89659
0.241031
28.0648
0.018483
18,080
151.724
41
0
null
0
54 cell(s), median diameter 151.7 px, 24% on the border, foreground 24.1%. Nothing wrong with this field.
plate1_L02_19_1
cell
41
ok
null
0.146341
0.788462
0.994178
0.220652
25.7673
0.012359
22,230
168.238
35
0
null
0
41 cell(s), median diameter 168.2 px, 15% on the border, foreground 22.1%. Nothing wrong with this field.
plate1_L02_1_1
cell
30
warn
high_border_fraction
0.366667
0.576923
1.10155
0.149602
15.1427
0.015447
27,291
186.408
19
0.105263
null
0
30 cell(s), median diameter 186.4 px, 37% on the border, foreground 15.0%. 37% of objects touch the field edge, so their crops will be truncated.
plate1_L02_20_1
cell
80
ok
null
0.2
1.53846
0.801138
0.318923
29.1469
0.009402
14,435.5
135.571
64
0
null
0
80 cell(s), median diameter 135.6 px, 20% on the border, foreground 31.9%. Nothing wrong with this field.
plate1_L02_21_1
cell
51
warn
high_border_fraction
0.352941
0.980769
0.746189
0.180667
28.0907
0.012143
12,523
126.273
33
0
null
0
51 cell(s), median diameter 126.3 px, 35% on the border, foreground 18.1%. 35% of objects touch the field edge, so their crops will be truncated.
plate1_L02_9_1
cell
59
ok
null
0.288136
1.13462
0.998889
0.308109
26.0527
0.011133
22,461.5
169.035
42
0
null
0
59 cell(s), median diameter 169.0 px, 29% on the border, foreground 30.8%. Nothing wrong with this field.
plate1_E01_10_1
nucleus
65
ok
null
0.169231
1.13043
1.06201
0.11671
13.0716
0.003069
7,925.5
100.454
54
0
null
0
65 nucleus(s), median diameter 100.5 px, 17% on the border, foreground 11.7%. Nothing wrong with this field.
plate1_E01_11_1
nucleus
48
ok
null
0.125
0.834783
1.08222
0.089125
9.93937
0.003099
8,230
102.366
42
0
null
0
48 nucleus(s), median diameter 102.4 px, 12% on the border, foreground 8.9%. Nothing wrong with this field.
plate1_E01_12_1
nucleus
39
ok
null
0.282051
0.678261
1.14502
0.083769
13.6046
0.003583
9,215
108.306
28
0
null
0
39 nucleus(s), median diameter 108.3 px, 28% on the border, foreground 8.4%. Nothing wrong with this field.
plate1_E01_13_1
nucleus
73
ok
null
0.164384
1.26957
1.00114
0.123165
12.0625
0.004064
7,043
94.6965
61
0
null
0
73 nucleus(s), median diameter 94.7 px, 16% on the border, foreground 12.3%. Nothing wrong with this field.
plate1_E01_14_1
nucleus
53
ok
null
0.09434
0.921739
1.07615
0.101729
8.94551
0.00346
8,138
101.792
48
0.0625
null
0
53 nucleus(s), median diameter 101.8 px, 9% on the border, foreground 10.2%. Nothing wrong with this field.
plate1_E01_16_1
nucleus
27
ok
null
0.074074
0.469565
1.15696
0.063336
10.807
0.004872
9,406
109.435
25
0.08
null
0
27 nucleus(s), median diameter 109.4 px, 7% on the border, foreground 6.3%. Nothing wrong with this field.
plate1_E01_17_1
nucleus
24
ok
null
0.125
0.417391
1.0349
0.043551
16.756
0.003272
7,526
97.8897
21
0
null
0.047619
24 nucleus(s), median diameter 97.9 px, 12% on the border, foreground 4.4%. Nothing wrong with this field.
plate1_E01_18_1
nucleus
57
ok
null
0.087719
0.991304
0.945071
0.084645
13.3258
0.003422
6,276.5
89.3931
52
0
null
0
57 nucleus(s), median diameter 89.4 px, 9% on the border, foreground 8.5%. Nothing wrong with this field.
plate1_E01_19_1
nucleus
29
ok
null
0.103448
0.504348
1.03002
0.0499
10.8194
0.00394
7,456.5
97.4288
26
0.038462
null
0.038462
29 nucleus(s), median diameter 97.4 px, 10% on the border, foreground 5.0%. Nothing wrong with this field.
plate1_E01_1_1
nucleus
49
ok
null
0.061225
0.852174
0.902428
0.065492
18.1101
0.003952
5,723
85.3596
46
0
null
0.021739
49 nucleus(s), median diameter 85.4 px, 6% on the border, foreground 6.5%. Nothing wrong with this field.
plate1_E01_20_1
nucleus
95
ok
null
0.157895
1.65217
0.907569
0.121297
14.2973
0.004439
5,788
85.8459
80
0
null
0.0125
95 nucleus(s), median diameter 85.8 px, 16% on the border, foreground 12.1%. Nothing wrong with this field.
plate1_E01_21_1
nucleus
65
ok
null
0.123077
1.13043
1.02238
0.124227
10.3052
0.003704
7,345
96.7055
57
0
null
0
65 nucleus(s), median diameter 96.7 px, 12% on the border, foreground 12.4%. Nothing wrong with this field.
plate1_E01_9_1
nucleus
64
ok
null
0.1875
1.11304
1.06187
0.122818
8.09563
0.004042
7,923.5
100.441
52
0.038462
null
0
64 nucleus(s), median diameter 100.4 px, 19% on the border, foreground 12.3%. Nothing wrong with this field.
plate1_E02_10_1
nucleus
46
ok
null
0.130435
0.8
1.03531
0.082639
15.4027
0.003785
7,532
97.9286
40
0
null
0
46 nucleus(s), median diameter 97.9 px, 13% on the border, foreground 8.3%. Nothing wrong with this field.
plate1_E02_11_1
nucleus
37
ok
null
0.081081
0.643478
0.94866
0.051726
9.15703
0.003329
6,324
89.7326
34
0.058824
null
0
37 nucleus(s), median diameter 89.7 px, 8% on the border, foreground 5.2%. Nothing wrong with this field.
plate1_E02_12_1
nucleus
55
ok
null
0.145455
0.956522
1.02342
0.09434
12.8024
0.004292
7,360
96.8041
47
0
null
0
55 nucleus(s), median diameter 96.8 px, 15% on the border, foreground 9.4%. Nothing wrong with this field.
plate1_E02_13_1
nucleus
78
ok
null
0.128205
1.35652
0.991533
0.123301
7.89354
0.002928
6,908.5
93.7879
68
0.058824
null
0
78 nucleus(s), median diameter 93.8 px, 13% on the border, foreground 12.3%. Nothing wrong with this field.
plate1_E02_14_1
nucleus
41
ok
null
0.219512
0.713043
0.958941
0.054442
28.6818
0.003165
6,465
90.7051
32
0
null
0.03125
41 nucleus(s), median diameter 90.7 px, 22% on the border, foreground 5.4%. Nothing wrong with this field.
plate1_E02_16_1
nucleus
59
ok
null
0.135593
1.02609
1.06398
0.106897
10.4456
0.004014
7,955
100.641
51
0.019608
null
0
59 nucleus(s), median diameter 100.6 px, 14% on the border, foreground 10.7%. Nothing wrong with this field.
plate1_E02_17_1
nucleus
66
ok
null
0.075758
1.14783
0.964358
0.091151
24.8538
0.00395
6,535
91.2174
61
0
null
0
66 nucleus(s), median diameter 91.2 px, 8% on the border, foreground 9.1%. Nothing wrong with this field.
plate1_E02_18_1
nucleus
83
ok
null
0.180723
1.44348
0.99736
0.130001
9.00069
0.003473
6,990
94.3391
68
0.029412
null
0
83 nucleus(s), median diameter 94.3 px, 18% on the border, foreground 13.0%. Nothing wrong with this field.
plate1_E02_19_1
nucleus
39
ok
null
0.128205
0.678261
0.964655
0.069565
12.2888
0.005007
6,540
91.2456
34
0
null
0
39 nucleus(s), median diameter 91.2 px, 13% on the border, foreground 7.0%. Nothing wrong with this field.
plate1_E02_1_1
nucleus
43
ok
null
0.116279
0.747826
0.648036
0.048003
44.7897
0.002778
2,954.5
61.297
38
0
null
0
43 nucleus(s), median diameter 61.3 px, 12% on the border, foreground 4.8%. Nothing wrong with this field.
plate1_E02_20_1
nucleus
102
ok
null
0.068628
1.77391
0.970756
0.168665
11.7488
0.00539
6,622
91.8226
95
0
null
0
102 nucleus(s), median diameter 91.8 px, 7% on the border, foreground 16.9%. Nothing wrong with this field.
plate1_E02_21_1
nucleus
73
ok
null
0.178082
1.26957
1.04735
0.132218
10.7624
0.003689
7,708.5
99.0672
60
0.05
null
0
73 nucleus(s), median diameter 99.1 px, 18% on the border, foreground 13.2%. Nothing wrong with this field.
plate1_E02_9_1
nucleus
19
ok
null
0.105263
0.330435
1.03524
0.030871
11.7571
0.003125
7,531
97.9222
17
0
null
0
19 nucleus(s), median diameter 97.9 px, 11% on the border, foreground 3.1%. Nothing wrong with this field.
plate1_L01_10_1
nucleus
82
ok
null
0.170732
1.42609
1.01581
0.128967
13.8351
0.003685
7,251
96.0846
68
0
null
0
82 nucleus(s), median diameter 96.1 px, 17% on the border, foreground 12.9%. Nothing wrong with this field.
plate1_L01_11_1
nucleus
58
ok
null
0.189655
1.0087
1.05052
0.106577
13.2668
0.003517
7,755
99.3679
47
0
null
0
58 nucleus(s), median diameter 99.4 px, 19% on the border, foreground 10.7%. Nothing wrong with this field.
plate1_L01_12_1
nucleus
60
ok
null
0.216667
1.04348
1.10332
0.115778
12.8327
0.003917
8,554
104.361
47
0
null
0
60 nucleus(s), median diameter 104.4 px, 22% on the border, foreground 11.6%. Nothing wrong with this field.
plate1_L01_13_1
nucleus
69
ok
null
0.130435
1.2
1.09324
0.129246
15.264
0.0036
8,399
103.409
60
0
null
0
69 nucleus(s), median diameter 103.4 px, 13% on the border, foreground 12.9%. Nothing wrong with this field.
plate1_L01_14_1
nucleus
63
ok
null
0.222222
1.09565
1.03421
0.103857
12.7853
0.0031
7,516
97.8247
49
0
null
0
63 nucleus(s), median diameter 97.8 px, 22% on the border, foreground 10.4%. Nothing wrong with this field.
plate1_L01_16_1
nucleus
54
ok
null
0.148148
0.93913
1.00811
0.069117
25.7262
0.003669
7,141.5
95.3564
46
0
null
0.021739
54 nucleus(s), median diameter 95.4 px, 15% on the border, foreground 6.9%. Nothing wrong with this field.
plate1_L01_17_1
nucleus
41
ok
null
0.170732
0.713043
0.947595
0.069715
18.0509
0.003858
6,311
89.6319
34
0
null
0
41 nucleus(s), median diameter 89.6 px, 17% on the border, foreground 7.0%. Nothing wrong with this field.
plate1_L01_18_1
nucleus
65
ok
null
0.153846
1.13043
0.928955
0.095147
11.2636
0.003194
6,064
87.8688
55
0
null
0
65 nucleus(s), median diameter 87.9 px, 15% on the border, foreground 9.5%. Nothing wrong with this field.
plate1_L01_19_1
nucleus
53
ok
null
0.169811
0.921739
1.00464
0.074589
12.5177
0.002698
7,092.5
95.0274
44
0
null
0.045455
53 nucleus(s), median diameter 95.0 px, 17% on the border, foreground 7.5%. Nothing wrong with this field.
plate1_L01_1_1
nucleus
19
ok
null
0.157895
0.330435
0.976315
0.027329
12.4014
0.002894
6,706.5
92.3484
16
0
null
0
19 nucleus(s), median diameter 92.3 px, 16% on the border, foreground 2.7%. Nothing wrong with this field.
plate1_L01_20_1
nucleus
87
ok
null
0.16092
1.51304
0.998862
0.138821
17.6767
0.004245
7,011
94.4811
73
0
null
0.013699
87 nucleus(s), median diameter 94.5 px, 16% on the border, foreground 13.9%. Nothing wrong with this field.
plate1_L01_21_1
nucleus
95
ok
null
0.126316
1.65217
0.977403
0.155737
9.60926
0.004503
6,713
92.4514
83
0.048193
null
0
95 nucleus(s), median diameter 92.5 px, 13% on the border, foreground 15.6%. Nothing wrong with this field.
plate1_L01_9_1
nucleus
72
ok
null
0.138889
1.25217
1.03097
0.123011
10.6082
0.006017
7,469
97.5183
62
0.080645
null
0
72 nucleus(s), median diameter 97.5 px, 14% on the border, foreground 12.3%. Nothing wrong with this field.
plate1_L02_10_1
nucleus
83
ok
null
0.048193
1.44348
0.856006
0.098945
37.8118
0.003474
5,149
80.9686
79
0
null
0.025317
83 nucleus(s), median diameter 81.0 px, 5% on the border, foreground 9.9%. Nothing wrong with this field.
plate1_L02_11_1
nucleus
30
warn
size_outliers
0.133333
0.521739
1.04812
0.039965
10.556
0.002615
7,719.5
99.1401
26
0.230769
null
0.115385
30 nucleus(s), median diameter 99.1 px, 13% on the border, foreground 4.0%. 23% of objects fall outside the robust size range 20.9-177.4 px (median 99.1 px, MAD 10.56), which a single population cannot do.
plate1_L02_12_1
nucleus
92
fail
over_segmented
0.076087
1.6
0.272292
0.085235
17.0885
0.004191
521
25.7557
85
0
null
0
92 nucleus(s), median diameter 25.8 px, 8% on the border, foreground 8.5%. Nothing wrong with this field. objects are 0.27x the plate's median diameter at 1.6x its count, the signature of objects split apart.
plate1_L02_13_1
nucleus
86
ok
null
0.151163
1.49565
0.815916
0.093238
36.1961
0.003744
4,678
77.1765
73
0
null
0
86 nucleus(s), median diameter 77.2 px, 15% on the border, foreground 9.3%. Nothing wrong with this field.
plate1_L02_14_1
nucleus
63
warn
size_outliers
0.126984
1.09565
0.176538
0.051919
6.60596
0.00277
219
16.6985
55
0.363636
null
0.018182
63 nucleus(s), median diameter 16.7 px, 13% on the border, foreground 5.2%. 36% of objects fall outside the robust size range -32.3-65.7 px (median 16.7 px, MAD 6.61), which a single population cannot do.
plate1_L02_16_1
nucleus
39
ok
null
0.179487
0.678261
1.04468
0.067703
12.3122
0.004443
7,669
98.8154
32
0
null
0
39 nucleus(s), median diameter 98.8 px, 18% on the border, foreground 6.8%. Nothing wrong with this field.
plate1_L02_17_1
nucleus
18
ok
null
0.222222
0.313043
0.980005
0.028868
4.50692
0.002762
6,749
92.6975
14
0.071429
null
0
18 nucleus(s), median diameter 92.7 px, 22% on the border, foreground 2.9%. Nothing wrong with this field.
plate1_L02_18_1
nucleus
56
ok
null
0.196429
0.973913
0.927652
0.081748
11.7075
0.003172
6,047
87.7455
45
0
null
0
56 nucleus(s), median diameter 87.7 px, 20% on the border, foreground 8.2%. Nothing wrong with this field.
plate1_L02_19_1
nucleus
50
ok
null
0.06
0.869565
0.945732
0.068949
17.7107
0.002984
6,285
89.4556
47
0
null
0.021277
50 nucleus(s), median diameter 89.5 px, 6% on the border, foreground 6.9%. Nothing wrong with this field.
End of preview.