Split (1)

test

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The dataset generation failed

Error code:   DatasetGenerationError
Exception:    ArrowInvalid
Message:      Failed to parse string: 'TRBD2' as a scalar of type double
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1848, in _prepare_split_single
                  writer.write_table(table)
                  ~~~~~~~~~~~~~~~~~~^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 765, in write_table
                  self._write_table(pa_table, writer_batch_size=writer_batch_size)
                  ~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 773, in _write_table
                  pa_table = table_cast(pa_table, self._schema)
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2378, in table_cast
                  return cast_table_to_schema(table, schema)
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2312, in cast_table_to_schema
                  cast_array_to_feature(
                  ~~~~~~~~~~~~~~~~~~~~~^
                      table[name] if name in table_column_names else pa.array([None] * len(table), type=schema.field(name).type),
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                      feature,
                      ^^^^^^^^
                  )
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 1861, in wrapper
                  return pa.chunked_array([func(chunk, *args, **kwargs) for chunk in array.chunks])
                                           ~~~~^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2152, in cast_array_to_feature
                  return array_cast(
                      array,
                  ...<2 lines>...
                      allow_decimal_to_str=allow_decimal_to_str,
                  )
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 1863, in wrapper
                  return func(array, *args, **kwargs)
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2015, in array_cast
                  return array.cast(pa_type)
                         ~~~~~~~~~~^^^^^^^^^
                File "pyarrow/array.pxi", line 1147, in pyarrow.lib.Array.cast
                File "/usr/local/lib/python3.14/site-packages/pyarrow/compute.py", line 412, in cast
                  return call_function("cast", [arr], options, memory_pool)
                File "pyarrow/_compute.pyx", line 604, in pyarrow._compute.call_function
                File "pyarrow/_compute.pyx", line 399, in pyarrow._compute.Function.call
                  result = GetResultValue(
                File "pyarrow/error.pxi", line 155, in pyarrow.lib.pyarrow_internal_check_status
                  return check_status(status)
                File "pyarrow/error.pxi", line 92, in pyarrow.lib.check_status
                  raise convert_status(status)
              pyarrow.lib.ArrowInvalid: Failed to parse string: 'TRBD2' as a scalar of type double
              
              The above exception was the direct cause of the following exception:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1369, in compute_config_parquet_and_info_response
                  parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
                                                                        ~~~~~~~~~~~~~~~~~~~~~~~~~^
                      builder, max_dataset_size_bytes=max_dataset_size_bytes
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  )
                  ^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 948, in stream_convert_to_parquet
                  builder._prepare_split(split_generator=splits_generators[split], file_format="parquet")
                  ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1694, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ~~~~~~~~~~~~~~~~~~~~~~~~~~^
                      gen_kwargs=gen_kwargs, job_id=job_id, **_prepare_split_args
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  ):
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1880, in _prepare_split_single
                  raise DatasetGenerationError("An error occurred while generating the dataset") from e
              datasets.exceptions.DatasetGenerationError: An error occurred while generating the dataset

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sequence_id string	locus string	v_call string	d_call null	j_call string	junction string	junction_aa string	duplicate_count int64	productive string
seq1	TRA	TRAV13-1	null	TRAJ50	TGTGCAGCAAGTGAAACCTCCTACGACAAGGTGATATTT	CAASETSYDKVIF	6,907	T
seq2	TRA	TRAV21	null	TRAJ50	TGTGCTGTCGATCTCATGAAAACCTCCTACGACAAGGTGATATTT	CAVDLMKTSYDKVIF	4,867	T
seq3	TRA	TRAV13-2	null	TRAJ45	TGTGCAGACTCCGGAGGAGGTGCTGACGGACTCACCTTT	CADSGGGADGLTF	4,592	T
seq4	TRA	TRAV12-3	null	TRAJ39	TGTGCGATTGGGCCAGGCAACATGCTCACCTTT	CAIGPGNMLTF	3,887	T
seq5	TRA	TRAV13-1	null	TRAJ11	TGTGCAGCAAAAGAAGGATACAGCACCCTCACCTTT	CAAKEGYSTLTF	2,762	T
seq6	TRA	TRAV35	null	TRAJ49	TGTGCTGGTCACACCGGTAACCAGTTCTATTTT	CAGHTGNQFYF	2,694	T
seq7	TRA	TRAV8-3	null	TRAJ21	TGTGCTGTGGGTGACAACTTCAACAAATTTTACTTT	CAVGDNFNKFYF	1,724	T
seq8	TRA	TRAV12-2	null	TRAJ6	TGTGCCGTGAACTGGGAGGAACAGGGAGGAAGCTACATACCTACATTT	CAVNWEEQGGSYIPTF	1,417	T
seq9	TRA	TRAV12-3	null	TRAJ27	TGTGCAATGAAGAGCACCAATGCAGGCAAATCAACCTTT	CAMKSTNAGKSTF	1,095	T
seq10	TRA	TRAV8-2	null	TRAJ22	TGTGTTGGTCGTAAGGGTTCTGCAAGGCAACTGACCTTT	CVGRKGSARQLTF	1,080	T
seq11	TRA	TRAV24	null	TRAJ52	TGTGCCTTTATAGGGGATGCTGGTGGTACTAGCTATGGAAAGCTGACATTT	CAFIGDAGGTSYGKLTF	1,074	T
seq12	TRA	TRAV5	null	TRAJ6	TGTGCAGAGATGGAAGGAGGAAGCTACATACCTACATTT	CAEMEGGSYIPTF	1,063	T
seq13	TRA	TRAV27	null	TRAJ42	TGTGCAGGAGGAGGAAGCCAAGGAAATCTCATCTTT	CAGGGSQGNLIF	1,055	T
seq14	TRA	TRAV22	null	TRAJ47	TGTGCTGTGGAGCCTTTATACGGAAACAAGCTGGTCTTT	CAVEPLYGNKLVF	981	T
seq15	TRA	TRAV3	null	TRAJ37	TGTGCTGTGAGAGACGGTGGAATGGGAAGCAACACAGGCAAACTAATCTTT	CAVRDGGMGSNTGKLIF	897	T
seq16	TRA	TRAV12-3	null	TRAJ9	TGTGCCCGGGGTGGAGGCTTCAAAACTATCTTT	CARGGGFKTIF	845	T
seq17	TRA	TRAV30	null	TRAJ20	TGCGGCACAGAGTATCCTAACGACTACAAGCTCAGCTTT	CGTEYPNDYKLSF	833	T
seq18	TRA	TRAV8-4	null	TRAJ20	TGTGCTGTGATCCAAATTAACGACTACAAGCTCAGCTTT	CAVIQINDYKLSF	810	T
seq19	TRA	TRAV19	null	TRAJ49	TGTGCTCTGAGGGCCGGTAACCAGTTCTATTTT	CALRAGNQFYF	769	T
seq20	TRA	TRAV26-1	null	TRAJ17	TGCATCCTATGGGTAGCTGCAGGCAACAAGCTAACTTTT	CILWVAAGNKLTF	760	T
seq21	TRA	TRAV13-2	null	TRAJ53	TGTGCAGAGACCCATAGTGGAGGTAGCAACTATAAACTGACATTT	CAETHSGGSNYKLTF	674	T
seq22	TRA	TRAV3	null	TRAJ45	TGTGCTGTGGCTAAAGATCTCCAGAATTCAGGAGGAGGTGCTGACGGACTCACCTTT	CAVAKDLQNSGGGADGLTF	646	T
seq23	TRA	TRAV12-1	null	TRAJ39	TGTGGAGCGGCAGGCAACATGCTCACCTTT	CGAAGNMLTF	637	T
seq24	TRA	TRAV10	null	TRAJ27	TGTGTGGGATACACCAATGCAGGCAAATCAACCTTT	CVGYTNAGKSTF	607	T
seq25	TRA	TRAV8-3	null	TRAJ30	TGTGCTGTGACCAGAGATGACAAGATCATCTTT	CAVTRDDKIIF	592	T
seq26	TRA	TRAV3	null	TRAJ6	TGTGCTGTGAGTGCAGCATCAGGAGGAAGCTACATACCTACATTT	CAVSAASGGSYIPTF	567	T
seq27	TRA	TRAV14DV4	null	TRAJ4	TGTGCAATGAGAGGGCCTATTTCTGGTGGCTACAATAAGCTGATTTTT	CAMRGPISGGYNKLIF	532	T
seq28	TRA	TRAV21	null	TRAJ4	TGTGCTGTTTCCCTTTCTGGTGGCTACAATAAGCTGATTTTT	CAVSLSGGYNKLIF	508	T
seq29	TRA	TRAV5	null	TRAJ34	TGTGCAGAGAGTGAGGGACCGACCTACACCGACAAGCTCATCTTT	CAESEGPTYTDKLIF	507	T
seq30	TRA	TRAV24	null	TRAJ36	TGTGCCTTTTTAGGTGGGGCAAACAACCTCTTCTTT	CAFLGGANNLFF	506	T
seq31	TRA	TRAV1-2	null	TRAJ33	TGTGCTGTGAGAGATAGCAACTATCAGTTAATCTGG	CAVRDSNYQLIW	501	T
seq32	TRA	TRAV26-1	null	TRAJ54	TGCATCGTCAGAGGCGCTGATCAGGGAGCCCAGAAGCTGGTATTT	CIVRGADQGAQKLVF	498	T
seq33	TRA	TRAV12-1	null	TRAJ50	TGTGTGGTGACGGAAACCTCCTACGACAAGGTGATATTT	CVVTETSYDKVIF	494	T
seq34	TRA	TRAV1-2	null	TRAJ33	TGTGCTGTGATGGATAGCAACTATCAGTTAATCTGG	CAVMDSNYQLIW	483	T
seq35	TRA	TRAV13-1	null	TRAJ20	TGTGCAGCAAGTGGGTACGACTACAAGCTCAGCTTT	CAASGYDYKLSF	478	T
seq36	TRA	TRAV1-2	null	TRAJ29	TGTGCTGTGAGAGATCATTCAGGAAACACACCTCTTGTCTTT	CAVRDHSGNTPLVF	462	T
seq37	TRA	TRAV21	null	TRAJ26	TGTGCTGTGCATGGCTATGGTCAGAATTTTGTCTTT	CAVHGYGQNFVF	460	T
seq38	TRA	TRAV12-3	null	TRAJ32	TGTGCAATGAACCCGGCGTGGGGTGGTGCTACAAACAAGCTCATCTTT	CAMNPAWGGATNKLIF	452	T
seq39	TRA	TRAV5	null	TRAJ33	TGTGCAGAGACCCAGGATAGCAACTATCAGTTAATCTGG	CAETQDSNYQLIW	439	T
seq40	TRA	TRAV8-3	null	TRAJ7	TGTGCTGTCTTCCTGTATGGGAACAACAGACTCGCTTTT	CAVFLYGNNRLAF	438	T
seq41	TRA	TRAV12-1	null	TRAJ31	TGTGTGGTGAACATGGACAATGCCAGACTCATGTTT	CVVNMDNARLMF	413	T
seq42	TRA	TRAV2	null	TRAJ24	TGTGCTGTGGAGGGTCCAACTGACAGCTGGGGGAAATTCCAGTTT	CAVEGPTDSWGKFQF	386	T
seq43	TRA	TRAV6	null	TRAJ17	TGTGCTCTCCTCGAGATGGTGATCAAAGCTGCAGGCAACAAGCTAACTTTT	CALLEMVIKAAGNKLTF	384	T
seq44	TRA	TRAV14DV4	null	TRAJ5	TGTGCAATGAGAGACCCACAGGGGGGCAGGAGAGCACTTACTTTT	CAMRDPQGGRRALTF	378	T
seq45	TRA	TRAV8-3	null	TRAJ31	TGTGCTGTGGGGACCGCCAGACTCATGTTT	CAVGTARLMF	360	T
seq46	TRA	TRAV19	null	TRAJ17	TGTGCTCTGAAACTGATCAAAGCTGCAGGCAACAAGCTAACTTTT	CALKLIKAAGNKLTF	358	T
seq47	TRA	TRAV9-2	null	TRAJ33	TGTGCTCGGGAGCACATGGATAGCAACTATCAGTTAATCTGG	CAREHMDSNYQLIW	356	T
seq48	TRA	TRAV3	null	TRAJ26	TGTGCTGTGAGACTACATAACTATGGTCAGAATTTTGTCTTT	CAVRLHNYGQNFVF	352	T
seq49	TRA	TRAV17	null	TRAJ53	TGTGCTACGGACGCGAGTGGAGGTAGCAACTATAAACTGACATTT	CATDASGGSNYKLTF	352	T
seq50	TRA	TRAV38-1	null	TRAJ52	TGTGCTTTCATGAAGGGTGCTGGTGGTACTAGCTATGGAAAGCTGACATTT	CAFMKGAGGTSYGKLTF	352	T
seq51	TRA	TRAV29DV5	null	TRAJ37	TGTGCAGCAAGCAACACAGGCAAACTAATCTTT	CAASNTGKLIF	346	T
seq52	TRA	TRAV5	null	TRAJ37	TGTGCAGAGGGGGGCAACACAGGCAAACTAATCTTT	CAEGGNTGKLIF	342	T
seq53	TRA	TRAV13-1	null	TRAJ50	TGTGCAGCATCAGAAACCTCCTACGACAAGGTGATATTT	CAASETSYDKVIF	339	T
seq54	TRA	TRAV26-2	null	TRAJ52	TGCATCCTGAGGGATCTAAATGCTGGTGGTACTAGCTATGGAAAGCTGACATTT	CILRDLNAGGTSYGKLTF	338	T
seq55	TRA	TRAV13-1	null	TRAJ50	TGTGCAGCAATGGAAACCTCCTACGACAAGGTGATATTT	CAAMETSYDKVIF	326	T
seq56	TRA	TRAV41	null	TRAJ57	TGTGCTGTCTTGGGAACTCAGGGCGGATCTGAAAAGCTGGTCTTT	CAVLGTQGGSEKLVF	320	T
seq57	TRA	TRAV8-1	null	TRAJ22	TGTGCCGTGAGATCTTCTGGTTCTGCAAGGCAACTGACCTTT	CAVRSSGSARQLTF	316	T
seq58	TRA	TRAV26-2	null	TRAJ50	TGCATCCTGCGAGAAACCTCCTACGACAAGGTGATATTT	CILRETSYDKVIF	311	T
seq59	TRA	TRAV22	null	TRAJ37	TGTGCGGGGAGCCCTAGCAACACAGGCAAACTAATCTTT	CAGSPSNTGKLIF	309	T
seq60	TRA	TRAV14DV4	null	TRAJ4	TGTGCAATGAGACCTCCCTTTAGGGGTGGCTACAATAAGCTGATTTTT	CAMRPPFRGGYNKLIF	295	T
seq61	TRA	TRAV27	null	TRAJ42	TGTGCAGGGGGGGGAAGCCAAGGAAATCTCATCTTT	CAGGGSQGNLIF	291	T
seq62	TRA	TRAV13-1	null	TRAJ42	TGTGCTTATGGAGGAAGCCAAGGAAATCTCATCTTT	CAYGGSQGNLIF	272	T
seq63	TRA	TRAV19	null	TRAJ5	TGTGCTCTGAGTGAGGCGCTGGGGGGCAGGAGAGCACTTACTTTT	CALSEALGGRRALTF	268	T
seq64	TRA	TRAV39	null	TRAJ26	TGTGCCGTGGACTTCCGGGATAACTATGGTCAGAATTTTGTCTTT	CAVDFRDNYGQNFVF	268	T
seq65	TRA	TRAV27	null	TRAJ42	TGTGCAGGAGGGGGAAGCCAAGGAAATCTCATCTTT	CAGGGSQGNLIF	259	T
seq66	TRA	TRAV10	null	TRAJ4	TGTGTGGTGCGATCTGGTGGCTACAATAAGCTGATTTTT	CVVRSGGYNKLIF	252	T
seq67	TRA	TRAV17	null	TRAJ53	TGTGCTACGGAAAATAGTGGAGGTAGCAACTATAAACTGACATTT	CATENSGGSNYKLTF	252	T
seq68	TRA	TRAV19	null	TRAJ17	TGTGCTCTGAGTGTGATCAAAGCTGCAGGCAACAAGCTAACTTTT	CALSVIKAAGNKLTF	244	T
seq69	TRA	TRAV1-2	null	TRAJ12	TGTGCTGTGATGGATAGCAGCTATAAATTGATCTTC	CAVMDSSYKLIF	244	T
seq70	TRA	TRAV8-3	null	TRAJ5	TGTGCTGTGGACCCTATGGACACGGGCAGGAGAGCACTTACTTTT	CAVDPMDTGRRALTF	241	T
seq71	TRA	TRAV26-2	null	TRAJ43	TGCATCCTGAGGGAATTTTACAATGACATGCGCTTT	CILREFYNDMRF	240	T
seq72	TRA	TRAV35	null	TRAJ42	TGTGCTGGCCAGTCCGGGCGCGTGGGAGGAAGCCAAGGAAATCTCATCTTT	CAGQSGRVGGSQGNLIF	235	T
seq73	TRA	TRAV14DV4	null	TRAJ22	TGTGCAATGAGACGCCCTATTTCTTCTGGTTCTGCAAGGCAACTGACCTTT	CAMRRPISSGSARQLTF	232	T
seq74	TRA	TRAV5	null	TRAJ31	TGTGCAGAGGATAACAATGCCAGACTCATGTTT	CAEDNNARLMF	224	T
seq75	TRA	TRAV27	null	TRAJ42	TGTGCAGGAGCAGGAAGCCAAGGAAATCTCATCTTT	CAGAGSQGNLIF	214	T
seq76	TRA	TRAV5	null	TRAJ30	TGTGCAGAGAGCCTGTGGGATGACAAGATCATCTTT	CAESLWDDKIIF	213	T
seq77	TRA	TRAV17	null	TRAJ36	TGTGCCCAAACTGGGGCAAACAACCTCTTCTTT	CAQTGANNLFF	213	T
seq78	TRA	TRAV38-2DV8	null	TRAJ48	TGTGCTTATAGGGCCCCGAGAGGAAATGAGAAATTAACCTTT	CAYRAPRGNEKLTF	213	T
seq79	TRA	TRAV19	null	TRAJ45	TGTGCTCTGAGTGTTTTTTCAGGAGGAGGTGCTGACGGACTCACCTTT	CALSVFSGGGADGLTF	212	T
seq80	TRA	TRAV9-2	null	TRAJ30	TGTGCTCTTCTGAACAGAGATGACAAGATCATCTTT	CALLNRDDKIIF	211	T
seq81	TRA	TRAV17	null	TRAJ6	TGTGCTACGGAGGGGGCGAGCGGAGGAAGCTACATACCTACATTT	CATEGASGGSYIPTF	208	T
seq82	TRA	TRAV21	null	TRAJ43	TGTGCTGTGTGGTACATGCGCTTT	CAVWYMRF	204	T
seq83	TRA	TRAV34	null	TRAJ3	TGTGGAGCAGACTCGCGGTACAGCAGTGCTTCCAAGATAATCTTT	CGADSRYSSASKIIF	195	T
seq84	TRA	TRAV27	null	TRAJ44	TGTGCAGGAGCTGACGGCACTGCCAGTAAACTCACCTTT	CAGADGTASKLTF	195	T
seq85	TRA	TRAV1-1	null	TRAJ15	TGCGCTGTGAGAGATTCAGCAGGAACTGCTCTGATCTTT	CAVRDSAGTALIF	195	T
seq86	TRA	TRAV13-1	null	TRAJ12	TGTGCAGCAGCCCGGATGGATAGCAGCTATAAATTGATCTTC	CAAARMDSSYKLIF	195	T
seq87	TRA	TRAV29DV5	null	TRAJ44	TGTGCAGCAAGCGTTAGTATTTGGACCGGCACTGCCAGTAAACTCACCTTT	CAASVSIWTGTASKLTF	188	T
seq88	TRA	TRAV1-2	null	TRAJ6	TGTGCTGTGAGGTCATCAGGAGGAAGCTACATACCTACATTT	CAVRSSGGSYIPTF	187	T
seq89	TRA	TRAV17	null	TRAJ43	TGTGCTCATGCCCCTCTGGATGACATGCGCTTT	CAHAPLDDMRF	184	T
seq90	TRA	TRAV13-2	null	TRAJ49	TGTGCAGAGATCCGAGGGAGGGACCAGTTCTATTTT	CAEIRGRDQFYF	181	T
seq91	TRA	TRAV38-2DV8	null	TRAJ52	TGTGCTTATAGTCCCGCCGCTGGTGGTACTAGCTATGGAAAGCTGACATTT	CAYSPAAGGTSYGKLTF	181	T
seq92	TRA	TRAV13-2	null	TRAJ12	TGTGCAGAGAATCTCGGGGATAGCAGCTATAAATTGATCTTC	CAENLGDSSYKLIF	178	T
seq93	TRA	TRAV19	null	TRAJ33	TGTGCTTCCAACCTTAAGGGGAGCAACTATCAGTTAATCTGG	CASNLKGSNYQLIW	178	T
seq94	TRA	TRAV19	null	TRAJ22	TGTGCTCTCGACTTTTCTTCTGGTTCTGCAAGGCAACTGACCTTT	CALDFSSGSARQLTF	174	T
seq95	TRA	TRAV27	null	TRAJ22	TGTGCAGGACAAGCCCCCTCTGGTTCTGCAAGGCAACTGACCTTT	CAGQAPSGSARQLTF	171	T
seq96	TRA	TRAV8-6	null	TRAJ47	TGTGCCGCCTGGGACATGGAATATGGAAACAAGCTGGTCTTT	CAAWDMEYGNKLVF	168	T
seq97	TRA	TRAV38-1	null	TRAJ54	TGTGCTTTCATGAGCTTAATTCAGGGAGCCCAGAAGCTGGTATTT	CAFMSLIQGAQKLVF	165	T
seq98	TRA	TRAV19	null	TRAJ37	TGTGCTCTGAGTGAGTTCTCTAGCAACACAGGCAAACTAATCTTT	CALSEFSSNTGKLIF	164	T
seq99	TRA	TRAV23DV6	null	TRAJ31	TGTGCAGCGACGGATAACAATGCCAGACTCATGTTT	CAATDNNARLMF	161	T
seq100	TRA	TRAV13-1	null	TRAJ50	TGTGCAGCAACGGAAACCTCCTACGACAAGGTGATATTT	CAATETSYDKVIF	160	T

End of preview.