pgs_id
large_stringlengths
9
9
⌀
superpopulation
large_stringclasses
5 values
severity
large_stringclasses
2 values
issue
large_stringclasses
5 values
recommended_action
large_stringclasses
4 values
mean
float64
-19,911,351.69
6.4M
⌀
std
float64
0
1.53M
⌀
n
int64
490
893
⌀
median
float64
-19,909,386
6.4M
⌀
p5
float64
-19,950,232.5
6.39M
⌀
p25
float64
-19,922,915.5
6.4M
⌀
p75
float64
-19,896,633.5
6.4M
⌀
p95
float64
-19,880,048
6.41M
⌀
PGS003735
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
13.914523
0.586334
585
13.9258
12.974689
13.495106
14.320707
14.872572
PGS000905
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
689.227445
10.564796
585
688.772522
673.002747
682.12854
695.816345
706.770508
PGS002457
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-7,998.665903
3.265
633
-7,999.249512
-8,001.887207
-8,000.414063
-7,997.981934
-7,993.963867
PGS005393
EUR
ERROR
quality_low_match_rate
exclude_pgs_until_reference_scoring_improves
18,737.875645
67.677909
633
18,738.03125
18,629.318359
18,690.634766
18,784.007813
18,852.496094
PGS005308
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
10.606688
0.605076
893
10.591499
9.666701
10.180601
11.047299
11.659299
PGS002502
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-248.815008
22.028527
490
-247.279747
-283.558838
-258.20813
-237.545425
-216.451096
PGS003446
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-79.536884
27.521144
490
-77.159111
-128.850906
-98.364334
-60.869503
-37.114174
PGS000167
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
11.532498
0.275706
893
11.535748
11.082598
11.354977
11.719506
11.972985
PGS000166
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
16.185683
0.3668
601
16.194962
15.583273
15.943662
16.446175
16.785625
PGS003734
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
12.303043
0.606443
585
12.315876
11.267376
11.887556
12.702621
13.295091
PGS002602
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-2.694189
0.785013
490
-2.729573
-3.961119
-3.187436
-2.175406
-1.330715
PGS004866
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
6.016039
0.464711
601
5.9973
5.308401
5.6816
6.3435
6.7677
PGS005243
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
0.525869
0.314293
633
0.518489
0.0174
0.305138
0.728672
1.07322
PGS005334
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-4.768307
0.997644
490
-4.809507
-6.432643
-5.402706
-4.096459
-3.101473
PGS000022
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
5.723465
0.69955
601
5.795357
4.531882
5.258506
6.197628
6.755692
PGS004202
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-12.327737
0.820906
633
-12.63714
-13.100036
-12.822358
-12.170388
-10.664836
PGS000646
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
6.038302
0.667762
893
6.038419
4.971509
5.583866
6.457433
7.159416
PGS002401
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-137.250332
5.35126
893
-137.608353
-145.557968
-140.93335
-133.629974
-128.044037
PGS003427
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-83.94698
5.349732
490
-83.846806
-91.775841
-87.511688
-80.346275
-74.882736
PGS003215
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
97.078274
4.088252
893
96.914185
90.430389
94.328491
99.514908
104.050583
PGS000618
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
4.258555
0.537362
893
4.274521
3.378345
3.873131
4.641413
5.135367
PGS002617
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
4.651895
0.762529
893
4.644644
3.393676
4.142233
5.18237
5.855686
PGS000177
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
15.813838
0.395717
585
15.801142
15.188355
15.54092
16.095732
16.477287
PGS004174
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-0.190941
0.006386
633
-0.192891
-0.197923
-0.195509
-0.187703
-0.176835
PGS000186
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
19.722009
0.520482
490
19.704256
18.843889
19.35907
20.082094
20.616901
PGS004199
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-1.985992
0.033826
585
-1.986454
-2.041607
-2.010585
-1.96332
-1.931034
PGS000117
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
17.630832
0.851129
633
17.667177
16.181232
17.09301
18.212376
18.981911
PGS002576
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
11.740476
1.658609
601
11.704916
8.90795
10.622537
12.857809
14.345734
PGS002280
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
5.274047
0.384156
893
5.257901
4.693
5.007801
5.525201
5.9493
PGS000661
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
5.682816
0.46742
585
5.7321
4.83878
5.39135
6.010681
6.33005
PGS004868
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
49.643695
0.119206
633
49.65326
49.442875
49.558411
49.726293
49.827388
PGS004181
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-2.599258
0.043698
585
-2.600136
-2.670951
-2.62844
-2.570695
-2.527334
PGS003414
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
13.956067
0.784506
490
13.950401
12.671801
13.4188
14.508601
15.233001
PGS003805
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
340,787.149627
731.694467
893
340,625.09375
340,014.984375
340,368.648438
340,947.40625
342,151.632813
PGS003331
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
8.878615
0.314474
893
8.8652
8.365501
8.665798
9.098399
9.407899
PGS002435
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-1,363.544862
2.66352
585
-1,363.713379
-1,367.54248
-1,365.373535
-1,361.742676
-1,359.178345
PGS002492
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-461.177501
4.632959
633
-461.257446
-468.633209
-464.226471
-458.225189
-453.365753
PGS002522
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-286.147595
76.505808
893
-280.745636
-414.822998
-336.497467
-238.746567
-166.393509
PGS002463
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-939.904508
3.097717
601
-940.513
-943.833252
-942.06604
-938.319824
-933.932983
PGS002402
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
647.91167
9.499022
633
647.194275
634.043762
641.10376
653.591187
665.786987
PGS004186
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-1.090179
0.033721
585
-1.089748
-1.146268
-1.111651
-1.067847
-1.036079
PGS002650
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-8.373877
0.284392
585
-8.376876
-8.82658
-8.569166
-8.166376
-7.900064
PGS002439
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
616.992235
2.523933
585
617.371094
612.197144
615.570068
618.637024
620.662659
PGS000163
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
3.988798
0.179464
601
3.982857
3.697969
3.881058
4.091807
4.288753
PGS002574
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
34.439248
1.280372
585
34.399143
32.316238
33.535648
35.302284
36.582359
PGS001775
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-2.661943
0.350711
633
-2.662999
-3.224
-2.885
-2.450999
-2.068
PGS000811
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-2.582988
0.272184
893
-2.5725
-3.044999
-2.763599
-2.407599
-2.1526
PGS002459
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-192.403164
3.294318
601
-192.427139
-198.100479
-194.611267
-190.198547
-187.215576
PGS002551
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-21.413978
2.902109
585
-21.384827
-26.356657
-23.096804
-19.70228
-16.675291
PGS000028
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
7.647689
0.636914
490
7.599735
6.621109
7.236557
8.098151
8.654819
PGS000043
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
23.071038
1.312617
490
22.938003
21.162199
22.0774
23.996798
25.415903
PGS000904
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
568.825692
9.733335
893
568.581299
553.148071
562.210022
575.345825
584.863831
PGS004868
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
49.900303
0.110977
601
49.901348
49.724095
49.826974
49.975333
50.072994
PGS004136
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-3.657333
0.54415
601
-3.653312
-4.543492
-4.015837
-3.295285
-2.792711
PGS002744
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
7.98188
0.476989
490
7.992499
7.148001
7.679998
8.287002
8.738
PGS002265
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
7.868634
0.435047
601
7.845102
7.199001
7.5684
8.1766
8.5926
PGS004171
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-0.433548
0.004731
585
-0.434219
-0.439727
-0.43696
-0.43061
-0.424432
PGS002647
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-18.784095
0.814647
490
-18.727499
-20.135878
-19.401283
-18.226698
-17.463776
PGS000765
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
6.297187
0.405586
601
6.2753
5.6604
6.026101
6.5782
7.0048
PGS002526
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
405.528147
17.123328
490
406.992554
378.945953
396.66626
413.508789
433.193787
PGS001791
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-3.080813
0.264281
633
-3.080259
-3.520466
-3.269636
-2.900787
-2.66407
PGS002809
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
12.630736
0.5568
490
12.609485
11.776143
12.224993
13.018023
13.540218
PGS002499
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-2,728.10868
6.317089
633
-2,728.078369
-2,737.959473
-2,732.278564
-2,724.250244
-2,717.805908
PGS002517
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-11,739.636853
6.809931
633
-11,740.99707
-11,745.768555
-11,742.958984
-11,738.319336
-11,728.256836
PGS002593
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
22.368641
1.377702
893
22.396597
20.12001
21.49353
23.257524
24.553734
PGS002445
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-8,189.833967
5.974139
633
-8,190.957031
-8,192.723633
-8,191.774414
-8,189.824219
-8,184.211426
PGS004165
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
0.791114
0.179724
490
0.789
0.5
0.668
0.905
1.113
PGS002233
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
13.812083
1.155884
893
13.822
11.868001
13.025
14.613998
15.696999
PGS005285
AMR
ERROR
quality_low_match_rate
exclude_pgs_until_reference_scoring_improves
0.063726
0.020515
490
0.064665
0.028064
0.049465
0.078353
0.096139
PGS003106
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-15.931759
0.803255
585
-15.956001
-17.293999
-16.452002
-15.43
-14.594002
PGS000747
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-1,228.024825
13.57848
601
-1,228.286987
-1,249.950806
-1,237.0896
-1,218.924072
-1,205.525269
PGS004138
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-4.202056
0.287057
490
-4.20615
-4.656322
-4.381184
-4.036844
-3.760333
PGS000137
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-37.643626
1.867583
490
-37.646128
-40.922264
-38.865337
-36.325211
-34.742523
PGS004168
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-1.638426
0.055074
893
-1.642487
-1.719029
-1.678069
-1.602868
-1.539972
PGS000805
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
24.725781
0.61403
633
24.734999
23.671009
24.332006
25.128998
25.731001
PGS002430
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-558.568949
6.929896
490
-559.747253
-564.913757
-561.364441
-557.425293
-547.376465
PGS005098
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
1.549497
0.260156
601
1.55139
1.124781
1.378219
1.716135
1.959216
PGS004216
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-2.744071
0.27866
601
-2.7365
-3.219468
-2.91666
-2.558401
-2.290638
PGS002628
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-5.057365
0.108067
893
-5.059687
-5.226127
-5.130631
-4.98718
-4.885581
PGS000802
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
3.64953
0.542733
585
3.64
2.771
3.317
4.009
4.559
PGS003107
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-0.001277
0.000149
490
-0.001232
-0.001611
-0.001331
-0.001188
-0.001124
PGS000753
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
4.375283
0.357057
601
4.38568
3.79022
4.13024
4.61726
4.988339
PGS002547
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-596.527668
1.381181
601
-596.932129
-598.195557
-597.575012
-595.634399
-593.729431
PGS002575
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-9.864445
1.000063
601
-9.93085
-11.320311
-10.537751
-9.246572
-8.095275
PGS004942
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
5.141341
0.153523
490
5.13936
4.899066
5.036574
5.244718
5.384613
PGS002488
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
2,348.319254
78.300601
893
2,357.827637
2,211.134521
2,295.376465
2,404.158447
2,460.182861
PGS003743
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
9.147992
0.609895
601
9.145001
8.151
8.736
9.541
10.172
PGS005163
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
1.560946
0.533272
633
1.567
0.744
1.169
1.937
2.412
PGS003344
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
3.122813
0.238559
633
3.1125
2.7558
2.9519
3.2831
3.5243
PGS003968
AFR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
19.22699
1.691685
893
19.217297
16.425332
18.051732
20.322959
22.073686
PGS000174
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
17.915512
0.581167
601
17.95969
16.965281
17.490234
18.326519
18.863493
PGS004170
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-1.315509
0.026909
601
-1.31694
-1.357214
-1.336086
-1.298178
-1.267859
PGS004166
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-1.370805
0.037626
585
-1.37308
-1.427175
-1.396222
-1.346014
-1.305243
PGS000884
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-0.076384
0.148475
601
-0.070771
-0.337645
-0.170719
0.023453
0.168857
PGS002246
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-7.69359
0.476657
601
-7.730425
-8.374736
-8.004738
-7.418512
-6.802294
PGS002404
SAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-81.220943
4.459185
601
-81.410339
-88.161804
-84.280296
-78.313736
-73.87294
PGS004198
AMR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
-1.886825
0.045498
490
-1.890102
-1.959527
-1.915213
-1.856863
-1.810756
PGS000183
EUR
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
9.673893
0.325119
633
9.666818
9.15104
9.448131
9.884448
10.249718
PGS002232
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
11.978521
1.320313
585
11.929311
9.791783
11.117416
12.898921
14.189481
PGS005221
EAS
ERROR
canary_collapsed_percentile
exclude_from_catalog_and_percentiles
2.643874
0.057303
585
2.64183
2.551848
2.606914
2.679466
2.743408