text:
# Adds an example both for the unit test as well as an example.  This
# implicitely installs any *.json files in the directory.
macro(add_example name interfaces supporting)
    # Set the base installation directory
    set(basedir "share/optizelle/examples/")

    # Compiles the example
    compile_example_unit(${name} ${interfaces})

    # Install any json or supporting files
    is_example("${interfaces}" enable_example)
    if(enable_example)
        # Grab and install the problem setups
        file(GLOB_RECURSE setups ${CMAKE_CURRENT_SOURCE_DIR} "*.json")
        install(FILES ${setups} DESTINATION share/optizelle/examples/${name})

        # Installs any additional supporting files
        install(FILES ${supporting}
            DESTINATION share/optizelle/examples/${name})
    endif()

    # Installs the compiled example and source
    foreach(interface ${interfaces})
        if(${interface} STREQUAL "cpp" AND ENABLE_CPP_EXAMPLES)
            install(FILES "${name}.cpp" DESTINATION "${basedir}/${name}")
            install(TARGETS ${name} DESTINATION "${basedir}/${name}")

        elseif(${interface} STREQUAL "python" AND ENABLE_PYTHON_EXAMPLES)
            install(FILES "${name}.py" DESTINATION "${basedir}/${name}")

        elseif(
            (${interface} STREQUAL "matlab" AND ENABLE_MATLAB_EXAMPLES) OR
            (${interface} STREQUAL "octave" AND ENABLE_OCTAVE_EXAMPLES)
        )
            install(FILES "${name}.m" DESTINATION "${basedir}/${name}")
        endif()
    endforeach()
endmacro()

# Compiles an example or unit test
macro(compile_example_unit name interfaces)
    # Compile the particular problem interface
    foreach(interface ${interfaces})
        if(${interface} STREQUAL "cpp")

            # Compile and link
            if(ENABLE_CPP_UNIT)
                include_directories(${OPTIZELLE_INCLUDE_DIRS})
                include_directories(${JSONCPP_INCLUDE_DIRS})
                add_executable(${name} "${name}.cpp")
                target_link_libraries(${name}
                    optizelle_shared
                    ${JSONCPP_LIBRARIES}
                    ${LAPACK_LIBRARIES}
                    ${BLAS_LIBRARIES})
                if(APPLE)
                    set_target_properties(${name} PROPERTIES INSTALL_RPATH "@loader_path/../../../../lib;@loader_path/../../thirdparty/lib")
                elseif(UNIX)
                    set_target_properties(${name} PROPERTIES INSTALL_RPATH "\$ORIGIN/../../../../lib;\$ORIGIN/../../thirdparty/lib")
                endif()
            endif()

        elseif(${interface} STREQUAL "python")
            # Nothing to do

        elseif(${interface} STREQUAL "matlab" OR ${interface} STREQUAL "octave")
            # Nothing to do
        endif()
    endforeach()
endmacro()

# Adds a unit test, which may or may not validate the results
macro(add_unit name interfaces units validated)
    # Figure out the number of unit tests
    list(LENGTH units nunits)

    # If we have an extra argument, we grab it, at least the first one
    set(extra ${ARGN})
    list(LENGTH extra nextra)
    if(${nextra} GREATER 0)
        list(GET extra 0 extra)
    endif()

    # When we specify a unit test based on a json file
    if(nunits GREATER 0)
        # Loop over each of the tests
        foreach(unit ${units})
            # Grab the unit name
            get_filename_component(uname ${unit} NAME_WE)

            # Loop over each of the interface interfaces
            foreach(interface ${interfaces})
                # Track if we've run the test
                set(test_executed FALSE)

                if(${interface} STREQUAL "cpp" AND ENABLE_CPP_UNIT)
                    # Run the test
                    add_test("Execution_of_cpp_${name}_${uname}"
                        ${name}
                        ${unit}
                        ${extra})

                    # Mark that the test was run
                    set(test_executed TRUE)

                elseif(${interface} STREQUAL "python" AND ENABLE_PYTHON_UNIT)
                    # Run the test
                    add_test("Execution_of_python_${name}_${uname}"
                        ${PYTHON_EXECUTABLE}
                        "${CMAKE_CURRENT_SOURCE_DIR}/${name}.py"
                        ${unit}
                        ${extra})

                    # Mark that the test was run
                    set(test_executed TRUE)

                    # Make sure Optizelle is available
                    set_tests_properties("Execution_of_python_${name}_${uname}"
                        PROPERTIES ENVIRONMENT
                            "PYTHONPATH=${CMAKE_BINARY_DIR}/src/python")

                # Run the MATLAB test
                elseif(${interface} STREQUAL "matlab"
                    AND ENABLE_MATLAB_UNIT
                )
                    # If we have an extra argument, append it
                    if(${nextra} GREATER 0)
                        set(matlab_unit "${unit}','${extra}")
                    else()
                        set(matlab_unit "${unit}")
                    endif()

                    # Run the test
                    if(WIN32)
                        set(wait "-wait")
                    else()
                        set(wait "")
                    endif()
                    add_test(
                        "Execution_of_matlab_${name}_${uname}"
                        ${MATLAB_EXECUTABLE}
                        -nosplash -nodesktop ${wait} -r
                        "addpath('${CMAKE_BINARY_DIR}/src/matlab','${CMAKE_CURRENT_SOURCE_DIR}'),${name}('${matlab_unit}'),exit")

                    # Mark that the test was run
                    set(test_executed TRUE)

                elseif(${interface} STREQUAL "octave" AND ENABLE_OCTAVE_UNIT)
                    # If we have an extra argument, append it
                    if(${nextra} GREATER 0)
                        set(octave_unit "${unit}','${extra}")
                    else()
                        set(octave_unit "${unit}")
                    endif()

                    # Run the test
                    add_test(
                        "Execution_of_octave_${name}_${uname}"
                        ${OCTAVE_EXECUTABLE}
                        --path "${CMAKE_BINARY_DIR}/src/octave"
                        --path "${CMAKE_CURRENT_SOURCE_DIR}"
                        "--eval"
                        "${name}('${octave_unit}'),exit")

                    # Mark that the test was run
                    set(test_executed TRUE)
                endif()

                # Fix any execution paths
                if(test_executed)
                    fix_unit_path("Execution_of_${interface}_${name}_${uname}")
                endif()

                # Diff the result of the optimization against the known solution
                if(${validated} AND test_executed)
                    add_test("Solution_to_${interface}_${name}_${uname}"
                        "${CMAKE_BINARY_DIR}/src/unit/utility/diff_restart"
                        ${unit} solution.json)

                    # We need the libraries to run our diff program
                    fix_unit_path("Solution_to_${interface}_${name}_${uname}")
                endif()
            endforeach()
        endforeach()

    # When we're just running a script with no arguments
    else()
        # Loop over each of the interface interfaces
        foreach(interface ${interfaces})
            # Track if we've run the test
            set(test_executed FALSE)

            if(${interface} STREQUAL "cpp" AND ENABLE_CPP_UNIT)
                # Run the test
                add_test("Execution_of_cpp_${name}" ${name})

                # Mark that the test was run
                set(test_executed TRUE)

            elseif(${interface} STREQUAL "python" AND ENABLE_PYTHON_UNIT)
                # Run the test
                add_test("Execution_of_python_${name}" ${PYTHON_EXECUTABLE}
                    "${CMAKE_CURRENT_SOURCE_DIR}/${name}.py")

                # Make sure Optizelle is available
                set_tests_properties("Execution_of_python_${name}"
                    PROPERTIES ENVIRONMENT
                        "PYTHONPATH=${CMAKE_BINARY_DIR}/src/python")

                # Mark that the test was run
                set(test_executed TRUE)

            # Run the MATLAB test
            elseif(${interface} STREQUAL "matlab"
                AND ENABLE_MATLAB_UNIT
            )
                # Run the test
                if(WIN32)
                    set(wait "-wait")
                else()
                    set(wait "")
                endif()
                add_test(
                    "Execution_of_matlab_${name}"
                    ${MATLAB_EXECUTABLE}
                    -nosplash -nodesktop ${wait} -r
                    "addpath('${CMAKE_BINARY_DIR}/src/matlab','${CMAKE_CURRENT_SOURCE_DIR}'),${name},exit")

                # Mark that the test was run
                set(test_executed TRUE)

            elseif(${interface} STREQUAL "octave" AND ENABLE_OCTAVE_UNIT)
                # Run the test
                add_test(
                    "Execution_of_octave_${name}"
                    ${OCTAVE_EXECUTABLE}
                    --path "${CMAKE_BINARY_DIR}/src/octave"
                    --path "${CMAKE_CURRENT_SOURCE_DIR}"
                    "--eval"
                    "${name},exit")

                # Mark that the test was run
                set(test_executed TRUE)
            endif()

            # Fix any execution paths
            if(test_executed)
                fix_unit_path("Execution_of_${interface}_${name}")
            endif()
        endforeach()
    endif()
endmacro()

# Compiles and adds a unit test
macro(compile_add_unit name interfaces)
    compile_example_unit(${name} "${interfaces}")
    add_unit(${name} "${interfaces}" "" FALSE)
endmacro()

# Returns true when there's some kind of unit test active.  We need this to
# figure out when we need to handle a common file.
macro(is_unit interfaces return)
    # Initially, we set return to false because we don't know if we're doing
    # any unit tests
    set(${return} FALSE)

    # Loop over the interfaces to figure out if we have any unit tests
    foreach(interface ${interfaces})
        if(${interface} STREQUAL "cpp" AND ENABLE_CPP_UNIT)
            set(${return} TRUE)

        elseif(${interface} STREQUAL "python" AND ENABLE_PYTHON_UNIT)
            set(${return} TRUE)

        elseif(${interface} STREQUAL "matlab" AND ENABLE_MATLAB_UNIT)
            set(${return} TRUE)

        elseif(${interface} STREQUAL "octave" AND ENABLE_OCTAVE_UNIT)
            set(${return} TRUE)
        endif()
    endforeach()
endmacro()

# Returns true when there's some kind of example active.  We need this to
# figure out when we need to handle a common file.
macro(is_example interfaces return)
    # Initially, we set return to false because we don't know if we're doing
    # any unit tests
    set(${return} FALSE)

    # Loop over the interfaces to figure out if we have any unit tests
    foreach(interface ${interfaces})
        if(${interface} STREQUAL "cpp" AND ENABLE_CPP_EXAMPLES)
            set(${return} TRUE)

        elseif(${interface} STREQUAL "python" AND ENABLE_PYTHON_EXAMPLES)
            set(${return} TRUE)

        elseif(${interface} STREQUAL "matlab" AND ENABLE_MATLAB_EXAMPLES)
            set(${return} TRUE)

        elseif(${interface} STREQUAL "octave" AND ENABLE_OCTAVE_EXAMPLES)
            set(${return} TRUE)
        endif()
    endforeach()
endmacro()

# Preprocesses a file prior to compilation
function(preprocess file data)
    # Compile the preprocessor
    include_directories(${OPTIZELLE_INCLUDE_DIRS})
    add_executable("${file}.pp" "${CMAKE_CURRENT_SOURCE_DIR}/pp/${file}.cpp"
        $<TARGET_OBJECTS:utility>)

    # Run the preprocessor on the source file
    add_custom_command(
        OUTPUT "${CMAKE_CURRENT_BINARY_DIR}/${file}"
        COMMAND "${file}.pp"
            "${data}"
            "<${CMAKE_CURRENT_SOURCE_DIR}/${file}"
            ">${CMAKE_CURRENT_BINARY_DIR}/${file}"
        WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
        COMMENT "Preprocessing ${file}"
        DEPENDS
            "${CMAKE_CURRENT_SOURCE_DIR}/pp/${file}.cpp"
            "${CMAKE_CURRENT_SOURCE_DIR}/${file}"
            "${data}")
    add_custom_target("${file}.pp.run"
        DEPENDS "${CMAKE_CURRENT_BINARY_DIR}/${file}")
endfunction()

# Adds in the appropriate path information for various libraries
function(fix_unit_path name)
    # On Windows, we need to grab the C++ system libraries as well as Optizelle itself
    if(WIN32)
        if(MINGW)
            get_filename_component(Mingw_Path ${CMAKE_CXX_COMPILER} PATH)
            set(system_libraries "\;${Mingw_Path}")
        else()
            set(system_libraries "")
        endif()
        set_property(TEST "${name}" APPEND PROPERTY ENVIRONMENT
            "PATH=${CMAKE_BINARY_DIR}/src/cpp/optizelle\;${CMAKE_BINARY_DIR}/src/octave/optizelle\;${CMAKE_BINARY_DIR}/thirdparty/lib${system_libraries}")
    endif()
endfunction()

repository: OptimoJoe/Optizelle

repo_name: OptimoJoe/Optizelle

extension: cmake


text:
require ${PN}.inc

RDEPENDS_${PN} = "irda-utils"

inherit gpe

SRC_URI[md5sum] = "a22e4b7ca7d5730e564cb92146de4b86"
SRC_URI[sha256sum] = "656685f167454f577a5b6441ffb55a51d38b53a4b449fde7758a80852cfc0bc7"

license: MIT

repository: overo/overo-oe-natty

license_type: permissive

repo_name: overo/overo-oe-natty

branch_name: HEAD

extension: bb


text:
file(REMOVE_RECURSE
  "PrintFunctionNames.exports"
  "CMakeFiles/PrintFunctionNames_exports"
  "PrintFunctionNames.exports"
)

# Per-language clean rules from dependency scanning.
foreach(lang)
  include(CMakeFiles/PrintFunctionNames_exports.dir/cmake_clean_${lang}.cmake OPTIONAL)
endforeach()

branch_name: refs/heads/master


text:
# Specify location of the corresponding NON-HLOS.bin file by adding
# NHLOS_URI:pn-firmware-qcom-ifc6560 = "..."  to local.conf. Use "file://"
# if the file is provided locally.

DESCRIPTION = "QCOM Firmware for Inforce IFC6560 board"

LICENSE = "CLOSED"

# ifc6560 isn't locked, so install firmware into generic location
FW_QCOM_NAME = "sda660"

FW_QCOM_LIST = "\
    adsp.mbn \
    cdsp.mbn \
    mba.mbn modem.mbn modemuw.jsn \
    venus.mbn \
"

require recipes-bsp/firmware/firmware-qcom.inc
require recipes-bsp/firmware/firmware-qcom-nhlos.inc

SPLIT_FIRMWARE_PACKAGES = "\
    linux-firmware-qcom-${FW_QCOM_NAME}-audio \
    linux-firmware-qcom-${FW_QCOM_NAME}-compute \
    linux-firmware-qcom-${FW_QCOM_NAME}-modem \
    linux-firmware-qcom-${FW_QCOM_NAME}-venus \
"


text:
import tock = require('tocktimer');

let timer: tock.Tock;

let opts: tock.TockOptions;

// Opts that conform to spec
opts = {
    interval: 100,
    countdown: true,
    callback: () => {
        // Tick tock...clock is ticking
    },
    complete: () => {
        // Ding ding...time's up
    }
};

// Create a tock instance
timer = tock();

timer.lap();
timer.msToTime(Date.now());
timer.msToTimecode(Date.now());
timer.pause();
timer.reset();
timer.stop();
timer.timeToMS('12:51');

gha_license_id: MIT

extension: ts


text:
require xorg-util-common.inc

#DESCRIPTION = ""

#DEPENDS += " "

FILES_${PN} += " /usr/lib/X11/config"


text:
@inproceedings{ShowTell,
    author={O. {Vinyals} and A. {Toshev} and S. {Bengio} and D. {Erhan}},
    booktitle={2015 IEEE Conference on Computer Vision and Pattern Recognition (CVPR)},
    title="\href{https://arxiv.org/pdf/1411.4555.pdf}{Show and tell: A neural image caption generator}",
    year={2015},
    volume={},
    number={},
    pages={3156-3164},
    doi={10.1109/CVPR.2015.7298935}
}

@inproceedings{ShowAttendTell,
    author = {Xu, Kelvin and Ba, Jimmy Lei and Kiros, Ryan and Cho, Kyunghyun and Courville, Aaron and Salakhutdinov, Ruslan and Zemel, Richard S. and Bengio, Yoshua},
    title = "\href{https://arxiv.org/pdf/1502.03044.pdf}{Show, Attend and Tell: Neural Image Caption Generation with Visual Attention}",
    year = {2015},
    booktitle = {International Conference on Machine Learning},
    pages = {2048–2057},
    numpages = {10},
}

@article{Flickr8k,
    author = {Hodosh, Micah and Young, Peter and Hockenmaier, Julia},
    title = "\href{https://pdfs.semanticscholar.org/9814/df8bd00ba999c4d1e305a7e9bca579dc7c75.pdf}{Framing Image Description as a Ranking Task: Data, Models and Evaluation Metrics}",
    year = {2013},
    issue_date = {May 2013},
    publisher = {AI Access Foundation},
    address = {El Segundo, CA, USA},
    volume = {47},
    number = {1},
    issn = {1076-9757},
    journal = {J. Artif. Int. Res.},
    month = may,
    pages = {853–899},
    numpages = {47}
}

repository: juletx/image-caption-generation

repo_name: juletx/image-caption-generation

branch_name: refs/heads/main

extension: bib


text:
@inproceedings{bevendorff:clef:2020,
 author = {Janek Bevendorff and Bilal Ghanem and Anastasia Giachanou and Mike Kestemont and Enrique Manjavacas and Ilia Markov and Maximilian Mayerl and Martin Potthast and Francisco Rangel and Paolo Rosso and Günther Specht and Efstathios Stamatatos and Benno Stein and Matti Wiegmann and Eva Zangerle},
 booktitle = {11th International Conference of the CLEF Association (CLEF 2020)},
 editor = {Avi Arampatzis and Evangelos Kanoulas and Theodora Tsikrika and Stefanos Vrochidis and Hideo
Joho and Christina Lioma and Carsten Eickhoff and Aurélie Névéol and Linda Cappellato and Nicola Ferro},
 month = {September},
 publisher = {Springer},
 title = {Overview of PAN 2020: Authorship Verification, Celebrity Profiling, Profiling Fake News Spreaders on Twitter, and Style Change Detection},
 url = {http://ceur-ws.org/Vol-2696/},
 venue = {Thessaloniki, Greece},
 year = {2020}
}


text:
require linux.inc

SECTION = "kernel"
DESCRIPTION = "Modified kernel for the Palm Pre based on the original source from Palm Inc."
KERNEL_IMAGETYPE = "uImage"

SRC_URI = " \
git://git.freesmartphone.org/linux-2.6.git;protocol=git;branch=palmpre/master \
file://defconfig \
"

S = "${WORKDIR}/git/"

SRCREV = "96eba42952e860f652e66a72569319dfd35756dc"
KV = "2.6.24"
PR="r1"
PV = "${KV}+gitr${SRCPV}"

# linux.inc overrides LOCAVERSION but we like to stay with the one used originally
do_compile_prepend() {
	sed -i -e '/CONFIG_LOCALVERSION=/d' ${S}/.config
	echo 'CONFIG_LOCALVERSION="-joplin-3430"' >>${S}/.config
}

repository: libo/openembedded

repo_name: libo/openembedded


text:
@online{esnet,
	author = {ESnet},
	title = {ESnet: Energy Sciences Network},
	date = {2020-09},
	keywords = {major},
	url = {https://www.es.net/}
}
@online{cern,
	author = {CERN},
	title = {CERN},
	date = {2020-09},
	keywords = {major},
	url = {https://home.cern/}
}
@online{perfsonar,
	author = {perfSONAR Project},
	title = {perfSONAR},
	date = {2020-09},
	keywords = {major},
	url = {https://www.perfsonar.net/}
}
@online{nx,
	author = {NetworkX},
	title = {NetworkX: Network Analysis in Python},
	date = {2020-09},
	keywords = {major},
	url = {https://networkx.github.io/}
}
@online{nxb,
	author = {NetworkX},
	title = {Bridge Components},
	date = {2020-09},
	keywords = {minor},
	url = {https://networkx.github.io/documentation/stable/reference/algorithms/generated/networkx.algorithms.connectivity.edge_kcomponents.bridge_components.html}
}
@online{nxk,
	author = {NetworkX},
	title = {k edge augmentation},
	date = {2020-09},
	keywords = {minor},
	url = {https://networkx.github.io/documentation/stable/reference/algorithms/generated/networkx.algorithms.connectivity.edge_augmentation.k_edge_augmentation.html}
}
@online{nxc,
	author = {NetworkX},
	title = {Centrality},
	date = {2020-09},
	keywords = {minor},
	url = {https://networkx.github.io/documentation/stable/reference/algorithms/centrality.html}
}
@online{mpl,
	authors = {John Hunter and Darren Dale and Eric Firing and Michael Droettboom and the Matplotlib development team},
	title = {Matplotlib: Visualization in Python},
	date = {2020-09},
	keywords = {major},
	url = {https://matplotlib.org/}
}
@online{bridge,
	author = {Wikipedia},
	title = {Bridge (graph theory)},
	date = {2020-09},
	keywords = {minor},
	url = {https://en.wikipedia.org/wiki/Bridge_(graph_theory)}
}
@online{centrality,
	author = {Wikipedia},
	title = {Centrality},
	date = {2020-09},
	keywords = {minor},
	url = {https://en.wikipedia.org/wiki/Centrality}}
}
@online{boundary,
	author = {Wikipedia},
	title = {Boundary (topology)},
	date = {2020-09},
	keywords = {minor},
	url = {https://en.wikipedia.org/wiki/Boundary_(topology)}
}
@online{hub,
	author = {Wikipedia},
	title = {Hub (network science)},
	date = {2020-09},
	keywords = {minor},
	url = {https://en.wikipedia.org/wiki/Hub_(network_science)}
}
@online{degree,
	author = {Wikipedia},
	title = {Degree (graph theory)},
	date = {2020-09},
	keywords = {minor},
	url = {https://en.wikipedia.org/wiki/Degree_(graph_theory)}
}
@online{connectivity,
	author = {Wikipedia},
	title = {Connectivity (graph theory)},
	date = {2020-09},
	keywords = {minor},
	url = {https://en.wikipedia.org/wiki/Connectivity_(graph_theory)}
}
@online{ip,
	author = {Wikipedia},
	title = {IP address},
	date = {2020-09},
	keywords = {minor},
	url = {https://en.wikipedia.org/wiki/IP_address}
}
@online{lhc,
	author = {CERN},
	title = {The Large Hadron Collider},
	date = {2020-09},
	keywords = {major},
	url = {https://home.cern/science/accelerators/large-hadron-collider}
}
@online{tcp,
	author = {Wikipedia},
	title = {Transmission Control Protocol},
	date = {2020-09},
	keywords = {minor},
	url = {https://en.wikipedia.org/wiki/Transmission_Control_Protocol}
}
@online{transatlantic,
	author = {Wikipedia},
	title = {Transatlantic communications cable},
	date = {2020-09},
	keywords = {minor},
	url = {https://en.wikipedia.org/wiki/Transatlantic_communications_cable}
}
@online{np,
	author = {NumPy},
	title = {NumPy: The fundamental package for scientific computing with Python},
	date = {2020-09},
	keywords = {major},
	url = {https://numpy.org/}
}
@online{pd,
	author = {pandas},
	title = {pandas},
	date = {2020-09},
	keywords = {major},
	url = {https://pandas.pydata.org/}
}
@online{es,
	author = {Elasticsearch},
	title = {Python Elasticsearch Client},
	date = {2020-09},
	keywords = {major},
	url = {https://elasticsearch-py.readthedocs.io/en/master/}
}
@online{query,
	author = {Elasticsearch},
	title = {Query DSL},
	date = {2020-09},
	keywords = {major},
	url = {https://www.elastic.co/guide/en/elasticsearch/reference/current/query-dsl.html}
}
@online{kibana,
	author = {Kibana},
	title = {Site-Based perfsonar General Breakdown},
	date = {2020-09},
	keywords = {major},
	url = {https://atlas-kibana.mwt2.org/s/networking}
}

repository: sand-ci/toy-network

repo_name: sand-ci/toy-network


text:
@article{Padmanabhan2017,
 author = {Padmanabhan, Haricharan and Kingsland, Maggie and Munro, Jason and Litvin, Daniel and Gopalan, Venkatraman},
 doi = {10.3390/sym9090187},
 issn = {2073-8994},
 journal = {Symmetry},
 month = {sep},
 number = {9},
 pages = {187},
 title = {Spatio-Temporal Symmetry—Point Groups with Time Translations},
 url = {http://www.mdpi.com/2073-8994/9/9/187},
 volume = {9},
 year = {2017}
}

repository: munrojm/academic-kickstart

repo_name: munrojm/academic-kickstart


text:
define([
],
function (
) {
  var File = function (name, contents) {
    this.name = name || 'Example';
    this.contents = contents === undefined ? defaultContents : contents;
    this.selected = true;
  };
  File.defaultContents = ('\
    var t3 = THREE;\n\
    var light = new t3.PointLight();\n\
    light.position.set(1, 1, 1);\n\
    scene.add(light);\n\
    \n\
    var makeCube = function (x, y, z) {\n\
      var cube = new t3.Mesh(\n\
        new t3.BoxGeometry(1, 1.1, 1),\n\
        new t3.MeshLambertMaterial(\n\
          {color: \'red\'})\n\
      );\n\
      cube.position.set(0, 0, 0).add(\n\
        new t3.Vector3(x, y, z));\n\
      scene.add(cube);\n\
      return cube;\n\
    };\n\
    \n\
    var cube = makeCube(0, 2, 2);\n\
    var i = 0;\n\
    return function () {\n\
      i += -0.02;\n\
      cube.rotation.y = i;\n\
    };\
  '.replace(/\n {4}/g, '\n').replace(/^\s+|\s+$/g, ''));
  File.findNumberAt = function (sketch, index) {
    return sketch.contents.substring(index).match(/-?\d+\.?\d*/)[0];
  };
  File.spinNumber = function (number, direction, amount) {
    if (number.indexOf('.') === -1) {
      return (parseInt(number, 10) + direction * amount).toString();
    }
    else {
      return (parseFloat(number) + direction * amount).toFixed(2);
    }
  };
  File.spinNumberAt = function (
    sketch, index, direction, amount, originalNumber
  ) {
    var number = File.findNumberAt(sketch, index);
    originalNumber = originalNumber || number;
    var newNumber = File.spinNumber(originalNumber, direction, amount);
    sketch.contents = (
      sketch.contents.substring(0, index) +
      newNumber +
      sketch.contents.substring(index + number.length)
    );
  };
  File.recordOriginalNumberAt = function (sketch, index) {
    File.originalIndex = index;
    File.originalNumber = File.findNumberAt(sketch, index);
  };
  File.offsetOriginalNumber = function (sketch, offset) {
    File.spinNumberAt(sketch, File.originalIndex, 1, offset, File.originalNumber);
  };
  return File;
});

extension: js


text:
@article{nuzzo2015inverse,
 author = {Nuzzo, Regina L},
 journal = {PM&R},
 number = {3},
 pages = {311--314},
 publisher = {Elsevier},
 title = {The inverse fallacy and interpreting P values},
 volume = {7},
 year = {2015}
}

repository: ReginaNuzzo/academic-kickstart

repo_name: ReginaNuzzo/academic-kickstart


text:
SUMMARY = "A shell script provides stress on CPU & WiFi for thermal measurement"
LICENSE = "GPL-2.0"
LIC_FILES_CHKSUM = "file://${COMMON_LICENSE_DIR}/GPL-2.0;md5=801f80980d171dd6425610833a22dbe6"

SRC_URI = "file://thermal.sh"

do_install() {
    install -d ${D}/tools
    install -m 755 ${WORKDIR}/thermal.sh ${D}/tools/thermal.sh
}

FILES_${PN} = "/tools"

repository: ADVANTECH-Corp/meta-advantech

repo_name: ADVANTECH-Corp/meta-advantech

branch_name: refs/heads/krogoth

gha_language: Shell


text:
DESCRIPTION = "Python pyinotify: Linux filesystem events monitoring"
HOMEPAGE = "https://pypi.python.org/pypi/pyinotify"
SECTION = "devel/python"
LICENSE = "MIT"
LIC_FILES_CHKSUM = "file://COPYING;md5=ab173cade7965b411528464589a08382"

RDEPENDS_${PN} += "python-threading python-io python-subprocess python-misc python-shell"

SRCNAME = "pyinotify"
SRC_URI = "https://pypi.python.org/packages/source/p/${SRCNAME}/${SRCNAME}-${PV}.tar.gz"

SRC_URI[md5sum] = "8e580fa1ff3971f94a6f81672b76c406"
SRC_URI[sha256sum] = "9c998a5d7606ca835065cdabc013ae6c66eb9ea76a00a1e3bc6e0cfe2b4f71f4"

S = "${WORKDIR}/${SRCNAME}-${PV}"

inherit setuptools

repository: rofehr/meta-openembedded

repo_name: rofehr/meta-openembedded


text:
DESCRIPTION = "AWS SDK for Python"
HOMEPAGE = "https://github.com/boto/boto3"
LICENSE = "Apache-2.0"
LIC_FILES_CHKSUM = "file://LICENSE;md5=2ee41112a44fe7014dce33e26468ba93"

inherit pypi setuptools3

SRC_URI[md5sum] = "9ec881a10da7c4e56f7af015acf782ce"
SRC_URI[sha256sum] = "f31e10348909dd4dbe0e75ecd695a78c13dc4b49712cf90048a9e0ae80a4a84d"

RDEPENDS_${PN} = "\
    ${PYTHON_PN}-botocore (>=1.15.29) \
    ${PYTHON_PN}-jmespath (>=0.7.1) \
    ${PYTHON_PN}-s3transfer (>=0.2.0) \
"

repository: nageshshamnur/liteos-yocto

repo_name: nageshshamnur/liteos-yocto

gha_language: Python


text:
require dropbear.inc
PR = "${INC_PR}.0"

SRC_URI += "file://no-host-lookup.patch"

SRC_URI[md5sum] = "95d900913bee4b27d7e9ce55f8a55427"
SRC_URI[sha256sum] = "8daa89512f9349fc131d48555726ffe1187e0f7d9f4cef992464c8098d86e77c"


text:
const commando = require('discord.js-commando');

class LocationCommandEU extends commando.Command{
      constructor(client){
        super(client, {
            name: 'loceu',
            group: 'user',
            memberName: 'loceu',
            description: 'Check user location command'
        });
      }
        async run(message, args){
          var role = member.guild.roles.find('name', 'Europe');
          member.addRole(role);
          message.reply("You Have set your Location to Europe");
        }
    }

module.exports = LocationCommandEU;


text:
@article{isern2020reconfigurable,
  title={Reconfigurable cyber-physical system for critical infrastructure protection in smart cities via smart video-surveillance},
  author={Isern, Juan and Barranco, Francisco and Deniz, Daniel and Lesonen, Juho and Hannuksela, Jari and Carrillo, Richard R},
  journal={Pattern Recognition Letters},
  volume={140},
  pages={303--309},
  year={2020},
  publisher={Elsevier}
}

repository: Nico-Cubero/starter-research-group

repo_name: Nico-Cubero/starter-research-group


text:
@InProceedings{carlson15,
  supplementary = {Supplementary:carlson15-supp.pdf},
  title = {{Stochastic Spectral Descent for Restricted Boltzmann Machines}},
  author = {Carlson, David and Cevher, Volkan and Carin, Lawrence},
  pages = {111-119},
  abstract = {Restricted Boltzmann Machines (RBMs) are widely used as building blocks for deep learning models. Learning typically proceeds by using stochastic gradient descent, and the gradients are estimated with sampling methods. However, the gradient estimation is a computational bottleneck, so better use of the gradients will speed up the descent algorithm. To this end, we first derive upper bounds on the RBM cost function, then show that descent methods can have natural ad- vantages by operating in the L\infty and Shatten-\infty norm. We introduce a new method called “Stochastic Spectral Descent” that updates parameters in the normed space. Empirical results show dramatic improvements over stochastic gradient descent, and have only have a fractional increase on the per-iteration cost.},
}

repository: mreid/papersite

repo_name: mreid/papersite

gha_language: TeX


text:
@article{multiply-shift,
  title={A reliable randomized algorithm for the closest-pair problem},
  author={Dietzfelbinger, Martin and Hagerup, Torben and Katajainen, Jyrki and Penttonen, Martti},
  journal={Journal of Algorithms},
  volume={25},
  number={1},
  pages={19--51},
  year={1997},
  publisher={Elsevier}
}

@article{block,
  title={Cache-, hash-, and space-efficient {Bloom} filters},
  author={Putze, Felix and Sanders, Peter and Singler, Johannes},
  journal={Journal of Experimental Algorithmics (JEA)},
  volume={14},
  pages={4--4},
  year={2010},
  publisher={ACM New York, NY, USA}
}

@inproceedings{cuckoo-filter,
  title={Cuckoo filter: Practically better than {Bloom}},
  author={Fan, Bin and Andersen, Dave G and Kaminsky, Michael and Mitzenmacher, Michael D},
  booktitle={Proceedings of the 10th ACM International on Conference on emerging Networking Experiments and Technologies},
  pages={75--88},
  year={2014}
}

@article{quotient-filter,
  title={Don’t Thrash: How to Cache Your Hash on Flash},
  author={Bender, Michael A and Farach-Colton, Martin and Johnson, Rob and Kraner, Russell and Kuszmaul, Bradley C and Medjedovic, Dzejla and Montes, Pablo and Shetty, Pradeep and Spillane, Richard P and Zadok, Erez},
  journal={Proceedings of the VLDB Endowment},
  volume={5},
  number={11},
  year={2012}
}

@article{split-bloom,
  title={Network applications of {Bloom} filters: A survey},
  author={Broder, Andrei and Mitzenmacher, Michael},
  journal={Internet mathematics},
  volume={1},
  number={4},
  pages={485--509},
  year={2004},
  publisher={Taylor \& Francis}
}

@article{lemire-xor-filter,
author = {Graf, Thomas Mueller and Lemire, Daniel},
title = {Xor Filters: Faster and Smaller Than {Bloom} and Cuckoo Filters},
year = {2020},
issue_date = {2020},
publisher = {Association for Computing Machinery},
address = {New York, NY, USA},
volume = {25},
issn = {1084-6654},
url = {https://doi.org/10.1145/3376122},
doi = {10.1145/3376122},
journal = {ACM J. Exp. Algorithmics},
month = mar,
articleno = {1.5},
numpages = {16},
keywords = {approximate set membership, cuckoo filters, Bloom filters}
}

@article{ultra-fast,
  title={Ultra-fast {Bloom} filters using {SIMD} techniques},
  author={Lu, Jianyuan and Wan, Ying and Li, Yang and Zhang, Chuwen and Dai, Huichen and Wang, Yi and Zhang, Gong and Liu, Bin},
  journal={{IEEE} Transactions on Parallel and Distributed Systems},
  volume={30},
  number={4},
  pages={953--964},
  year={2018},
  publisher={{IEEE}}
}

@article{bloom-overtakes,
  title={Performance-optimal filtering: {Bloom} overtakes cuckoo at high throughput},
  author={Lang, Harald and Neumann, Thomas and Kemper, Alfons and Boncz, Peter},
  journal={Proceedings of the VLDB Endowment},
  volume={12},
  number={5},
  pages={502--515},
  year={2019},
  publisher={VLDB Endowment}
}

@article{ribbon-filter,
  title={Ribbon filter: practically smaller than {Bloom} and {Xor}},
  author={Dillinger, Peter C and Walzer, Stefan},
  journal={arXiv preprint arXiv:2103.02515},
  year={2021}
}

repository: tenzir/libfilter

repo_name: tenzir/libfilter


text:
% Note that JHEP only prints the preprint number etc. if the entry type is Article.
% If you are planning to submit to JHEP/JINST replace all Booklet with Article.

% While it is possible to use the collaboration field, this only works with a few styles
% and so is discouraged.

% How to cite a paper from an LHC collaboration
% The name of the first author must NOT appear, hence the use of xauthor instead of author in this example.
@article{lhcCollaboration:2012,
  author = "{ATLAS Collaboration}",
  xauthor = "Aad, G. and others",
  title = "{Searches for supersymmetry with the ATLAS detector using final states with two leptons
    and missing transverse momentum in \(\sqrt{s} = 7~\text{TeV}\) proton--proton collisions}",
  journal = "\PLB{}",
  volume = "709",
  number = "3",
  pages = "137",
  doi = "10.1016/j.physletb.2012.01.076",
  year = 2012,
  reportNumber = "CERN-PH-EP-2011-165",
  archivePrefix = "arXiv",
  eprint = "1110.6189",
  primaryClass = "hep-ex",
}

% How to cite a paper from other big collaborations
% The name of the first author must NOT appear.
@article{tevatronCollaboration:1995,
      author         = "{CDF Collaboration}",
      title          = "{Observation of top quark production in \(\bar{p}p\) collisions}",
      xcollaboration  = "CDF",
      journal        = "Phys. Rev. Lett.",
      volume         = "74",
      year           = "1995",
      pages          = "2626-2631",
      doi            = "10.1103/PhysRevLett.74.2626",
      eprint         = "hep-ex/9503002",
      archivePrefix  = "arXiv",
      primaryClass   = "hep-ex",
      reportNumber   = "FERMILAB-PUB-95-022-E, CDF-PUB-TOP-PUBLIC-3040,
                        ANL-HEP-PR-95-44",
      SLACcitation   = "%%CITATION = HEP-EX/9503002;%%"
}

% How to cite a paper from any other collaboration
% The name of the first author MUST appear.
@article{otherCollaboration:2007,
  author = "{PHOBOS Collaboration} and Alver, B. and others",
  title = "{Cluster properties from two-particle angular correlations in \(pp\) collisions at \(\sqrt{s} = 200~\text{GeV}\) and
    \(410~\text{GeV}\)}",
  xcollaboration = "PHOBOS",
  journal = "\PRC{}",
  volume = "75",
  pages = "054913",
  doi = "10.1103/PhysRevC.75.054913",
  year = 2007,
  archivePrefix = "arXiv",
  eprint = "0704.0966",
  primaryClass = "hep-ex",
}

% How to cite a paper from individual authors
@article{authors:2008,
  author = "Sherstnev, A. and Thorne, R. S.",
  title = "{Parton distributions for LO generators}",
  journal = "\EPJC",
  volume = "55",
  pages = "553",
  doi = "10.1140/epjc/s10052-008-0610-x",
  year = 2008,
  archivePrefix = "arXiv",
  eprint = "0711.2473",
  primaryClass = "hep-ph",
}

% How to cite an arXiv only paper
@booklet{arxivOnly:2009,
  author = "Skands, P. Z.",
  title = "{The Perugia tunes}",
  year = 2009,
  archivePrefix = "arXiv",
  eprint = "0905.3418",
  primaryClass = "hep-ph",
}

% How to cite an arXiv only paper submitted to a journal
@article{arxivSub:2011,
  author = "Monk, J. and Oropeza-Barrera, C.",
  title = "{The HBOM method for unfolding detector effects}",
  journal = "submitted to \NIM{}",
  year = 2011,
  archivePrefix = "arXiv",
  eprint = "1111.4869",
  primaryClass = "hep-ex",
}

% How to cite an ATLAS CONF note
% The name of the first author must NOT appear
@booklet{ATLAS-CONF-2012-058-test,
  author = "{ATLAS Collaboration}",
  title = "{Search for gluino-mediated scalar top and bottom quark production in final states with missing transverse energy and at least three \(b\)-jets with the ATLAS Detector}",
  howpublished = "{ATLAS-CONF-2012-058}",
  url = "http://cdsweb.cern.ch/record/1453786",
  year = "2012",
}

% How to cite part of a collection using biblatex.
@collection{lhc:vol1a,
  editor =       "Brüning, Oliver Sim and Collier, Paul and Lebrun, P
                  and Myers, Stephen and Ostojic, Ranko and Poole,
                  John and Proudlock, Paul",
  title =        "{LHC Design Report. 1. The LHC Main Ring}",
  institution =  "CERN",
  number =       "CERN-2004-003-V-1, CERN-2004-003",
  address =      "Geneva",
  year =         "2004",
  url =          "https://cdsweb.cern.ch/record/782076"
}

% How to cite part of a collection using traditional BibTeX.
@booklet{lhc:vol1b,
  editor =       "Brüning, Oliver Sim and Collier, Paul and Lebrun, P
                  and Myers, Stephen and Ostojic, Ranko and Poole,
                  John and Proudlock, Paul",
  title =        "{LHC Design Report. 1. The LHC Main Ring}",
  institution =  "CERN",
  howpublished = "{CERN-2004-003-V-1, CERN-2004-003}",
  address =      "Geneva",
  year =         "2004",
  url =          "https://cdsweb.cern.ch/record/782076"
}

% How to cite a book.
@book{kopka04,
  author =    {Kopka, Helmut and Daly, Patrick W.},
  title =     {Guide to \LaTeX},
  publisher = {Addison-Wesley},
  year =      {2004},
  edition =   {4}
}

% How to cite a thesis.
@thesis{tlodd:2012,
  author =       {Loddenkötter, Thomas},
  title =        {Implementation of a kinematic fit of single
                  top-quark production in association with a \(W\) boson
                  and its application in a neural-network-based
                  analysis in {ATLAS}},
  type =         {PhD Thesis},
  school =       {University of Bonn},
  year =         {2012},
  note =         {BONN-IR-2012-06},
  url =          {http://hss.ulb.uni-bonn.de/diss_online},
}

% How to cite an online source.
@online{lshort,
  author =    {Oetiker, Tobias and others},
  title =     "{A (Not So) Short Introduction to LaTeX2e}",
  url =       {http://ctan.org/tex-archive/info/lshort}
}


text:
%% mine articles and references

%%% ARTICLES

@ARTICLE{lorem_article,
   author = {{Redmon}, J. and {Divvala}, S. and {Girshick}, R. and {Farhadi}, A.
	},
    title = "{You Only Look Once: Unified, Real-Time Object Detection}",
  journal = {ArXiv e-prints},
archivePrefix = "arXiv",
   eprint = {1506.02640},
 primaryClass = "cs.CV",
 keywords = {Computer Science - Computer Vision and Pattern Recognition},
     year = 2015,
    month = jun,
   adsurl = {http://adsabs.harvard.edu/abs/2015arXiv150602640R},
  adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

%%% WEBSITE

@online{lorem_web,
    author        = {Berkley},
    title         = {Caffe, Deep Learning Framework},
    year          = {2008},
    url           = {http://caffe.berkeleyvision.org/}
}

repository: DrewNF/Write-Thesis-in-Latex

path: /Thesis Template ENG/references.bib

repo_name: DrewNF/Write-Thesis-in-Latex


text:
@article{a1,
  author      = {A. P. Dempster},
  title       = {A Generalization of Bayesian Inference},
  journal     = {Journal of the Royal Statistical Society: Series B (Methodological)},
  year        = {1968},
  number      = {30},
  volume      = {2},
  pages       = {205-232},
}

@article{a2,
	author      = {Glenn Shafer and A. F. M. Smith},
	title       = {A Mathematical Theory of Evidence},
	journal     = {Biometrics},
	year        = {1976},
	number      = {32},
	volume      = {3},
	pages       = {703},
}

@article{a3,
	author      = {Jian-Bo Yang and Jun Liu and Jin Wang and How-Sing Sii and Hong-Wei Wang},
	title       = {Belief rule-base inference methodology using the evidential reasoning Approach-RIMER},
	journal     = {IEEE Transactions on Systems, Man, and Cybernetics - Part A: Systems and Humans},
	year        = {2006},
	number      = {36},
	volume      = {2},
	pages       = {266-285},
}

@book{b1,
	author      = {Kwangsun Yoon and C. L Hwang},
	title       = {Multiple attribute decision making},
	edition     = {},
	address     = {Thousand Oaks, CA},
	publisher   = {Sage Publications},
	year        = {1995},
}

@article{a4,
	author      = {L.A. Zadeh},
	title       = {Fuzzy sets},
	journal     = {Information and Control},
	year        = {1965},
	number      = {8},
	volume      = {3},
	pages       = {338-353},
}

@article{a5,
	author      = {Ron Sun},
	title       = {Robust reasoning: integrating rule-based and similarity-based reasoning},
	journal     = {Artificial Intelligence},
	year        = {1995},
	number      = {75},
	volume      = {2},
	pages       = {241-295},
}

@article{a6,
	author      = {Zhi-Jie Zhou and Chang-Hua Hu and Jian-Bo Yang and Dong-Ling Xu and Dong-Hua Zhou},
	title       = {Online updating belief rule based system for pipeline leak detection under expert intervention},
	journal     = {Expert Systems with Applications},
	year        = {2009},
	number      = {36},
	volume      = {4},
	pages       = {7700-7709},
}

@article{a7,
	author      = {Jiang Jiang and Xuan Li and Zhi-jie Zhou and Dong-ling Xu and Ying-wu Chen},
	title       = {Weapon System Capability Assessment under uncertainty based on the evidential reasoning approach},
	journal     = {Expert Systems with Applications},
	year        = {2011},
}

@article{a8,
	author      = {Ying Yang and Chao Fu and Yu-Wang Chen and Dong-Ling Xu and Shan-Lin Yang},
	title       = {A belief rule based expert system for predicting consumer preference in new product development},
	journal     = {Knowledge-Based Systems},
	year        = {2016},
	number      = {94},
	volume      = {},
	pages       = {105-113},
}

@article{a9,
	author      = {Jian-Bo Yang and Jun Liu and Dong-Ling Xu and Jin Wang and Hongwei Wang},
	title       = {Optimization Models for Training Belief-Rule-Based Systems},
	journal     = {IEEE Transactions on Systems, Man, and Cybernetics - Part A: Systems and Humans},
	year        = {2007},
	number      = {37},
	volume      = {4},
	pages       = {569-585},
}

@article{a10,
	author      = {常瑞 and 张速},
	title       = {基于优化步长和梯度法的置信规则库参数学习方法},
	journal     = {华北水利水电学院学报},
	year        = {2011},
	number      = {32},
	volume      = {1},
	pages       = {154-157},
}

@article{a11,
	author      = {Rui-Yu Chang and  Hongwei Wang and Jian-Bo Yang},
	title       = {An algorithm for training parameters in belief rule-bases based on the gradient and dichotomy methods},
	journal     = {Systems Engineering},
	year        = {2007},
	number      = {},
	volume      = {},
	pages       = {},
}

@article{a12,
	author      = {吴伟昆 and 杨隆浩 and 傅仰耿 and 张立群 and 巩晓婷},
	title       = {基于加速梯度求法的置信规则库参数训练方法},
	journal     = {计算机科学与探索},
	year        = {2014},
	number      = {8},
	volume      = {8},
	pages       = {989-1001},
}

@article{a13,
	author      = {苏群 and 杨隆浩 and 傅仰耿 and 吴英杰 and 巩晓婷},
	title       = {基于变速粒子群优化的置信规则库参数训练方法},
	journal     = {计算机应用},
	year        = {2014},
	number      = {8},
	volume      = {34},
	pages       = {2161-2165},
}

@article{a14,
	author      = {王韩杰 and 杨隆浩 and 傅仰耿 and 吴英杰 and 巩晓婷},
	title       = {专家干预下置信规则库参数训练的差分进化算法},
	journal     = {计算机科学},
	year        = {2015},
	number      = {5},
	volume      = {42},
	pages       = {88-93},
}

@article{a15,
	author      = {Jun Liu and Luis Martinez and Alberto Calzada Calzada and Hui Wang},
	title       = {A novel belief rule base representation, generation and its inference methodology},
	journal     = {Knowledge-Based Systems},
	year        = {2013},
	number      = {53},
	volume      = {},
	pages       = {129-141},
}

@article{a16,
	author      = {C. E. Shannon},
	title       = {A Mathematical Theory of Communication},
	journal     = {Bell System Technical Journal},
	year        = {1948},
	number      = {27},
	volume      = {4},
	pages       = {623-656},
}

@article{a17,
	author      = {Herbert Robbins and Sutton Monro},
	title       = {A Stochastic Approximation Method},
	journal     = {The Annals of Mathematical Statistics},
	year        = {1951},
	number      = {22},
	volume      = {3},
	pages       = {400-407},
}

@article{a18,
	author      = {Krzysztof C. Kiwiel},
	title       = {Convergence and efficiency of subgradient methods for quasiconvex minimization},
	journal     = {Mathematical Programming},
	year        = {2001},
	number      = {90},
	volume      = {1},
	pages       = {1-25},
}

@article{a19,
	author      = {David E. Rumelhart and Geoffrey E. Hinton and Ronald J. Williams},
	title       = {Learning representations by back-propagating errors},
	journal     = {Nature},
	year        = {1986},
	number      = {323},
	volume      = {6088},
	pages       = {533-536},
}

@article{a20,
	author      = {Alberto Calzada and Jun Liu and Hui Wang and Anil Kashyap},
	title       = {A New Dynamic Rule Activation Method for Extended Belief Rule-Based Systems},
	journal     = {IEEE Transactions on Knowledge and Data Engineering},
	year        = {2015},
	number      = {27},
	volume      = {4},
	pages       = {880-894},
}

@article{a21,
	author      = {林燕清 and 傅仰耿},
	title       = {基于改进相似性度量的扩展置信规则库规则激活方法},
	journal     = {中国科学技术大学学报},
	year        = {2018},
	number      = {1},
	volume      = {48},
	pages       = {21-27},
}

@article{a22,
	author      = {Yan-Qing Lin and Yang-Geng Fu and Qun Su and Ying-Ming Wang and Xiao-Ting Gong},
	title       = {A rule activation method for extended belief rule base with VP-tree and MVP-tree},
	journal     = {Journal of Intelligent and Fuzzy Systems},
	year        = {2017},
	number      = {6},
	volume      = {33},
	pages       = {3695-3705},
}

@article{a23,
	author      = {WEIJIE FANG and XIAOTING GONG and GENGGENG LIU and YINGJIE WU
AND YANGGENG FU},
	title       = {A Balance Adjusting Approach of Extended
	Belief-Rule-Based System for Imbalanced
Classification Problem},
	journal     = {IEEE Access},
	year        = {2020},
	number      = {19419049},
	volume      = {8},
	pages       = {41201-41212},
}

@article{a24,
	author      = {Long-Hao Yang},
	title       = {New activation weight calculation and parameter optimization for extended belief rule-based system based on sensitivity analysis},
	journal     = {Knowledge and Information Systems},
	year        = {2018},
	number      = {2},
	volume      = {60},
	pages       = {837-878},
}

@article{a25,
	author      = {Yanni Wang},
	title       = {Parameter Learning for an Intuitionistic Fuzzy Belief Rule-Based Systems Based on Weight and Reliability},
	journal     = {Journal of Advanced Computational Intelligence and Intelligent Informatics},
	year        = {2019},
	number      = {2},
	volume      = {23},
	pages       = {219-228},
}

@article{a26,
	author      = {Haizhen Zhu},
	title       = {A minimum centre distance rule activation method for extended belief rule-based classification systems},
	journal     = {Applied Soft Computing},
	year        = {2020},
	volume      = {91},
	pages       = {106214},
}

@article{a27,
	author      = {Qianlei Jia},
	title       = {A Novel Fault Detection Model Based on Atanassov’s Interval-Valued Intuitionistic Fuzzy Sets, Belief Rule Base and Evidential Reasoning},
	journal     = {IEEE Access},
	year        = {2020},
	volume      = {8},
	pages       = {4551-4567},
}

repository: Eriri/others

repo_name: Eriri/others


text:
DESCRIPTION = "Install tegra bup payload file in the location expected by nv_update_engine"
LICENSE = "MIT"
LIC_FILES_CHKSUM = "file://${COMMON_LICENSE_DIR}/MIT;md5=0835ade698e0bcf8506ecda2f7b4f302"

COMPATIBLE_MACHINE = "(tegra)"

inherit kernel-artifact-names

def bupfile_basename(d):
    if bb.utils.to_boolean(d.getVar('INITRAMFS_IMAGE_BUNDLE')):
        return "${KERNEL_IMAGETYPE}-${INITRAMFS_LINK_NAME}"
    return "${INITRAMFS_IMAGE}-${MACHINE}"

def bup_dependency(d):
    if bb.utils.to_boolean(d.getVar('INITRAMFS_IMAGE_BUNDLE')):
        return "kernel-bup-payload:do_deploy"
    return "${INITRAMFS_IMAGE}:do_image_complete"

BUPFILE = "${@bupfile_basename(d)}.bup-payload"

do_install() {
    install -d ${D}/opt/ota_package/
    install -m 0644 ${DEPLOY_DIR_IMAGE}/${BUPFILE} ${D}/opt/ota_package/bl_update_payload
}

ALLOW_EMPTY:${PN} = "1"

do_install[depends] += "${@bup_dependency(d)}"
FILES:${PN} = "/opt/ota_package/bl_update_payload"
RDEPENDS:${PN} += "tegra-redundant-boot-update-engine"
# For UEFI build - remove once buildpaths issue is resolved there
INSANE_SKIP:${PN} = "buildpaths"
PACKAGE_ARCH = "${MACHINE_ARCH}"

repository: SOL-Space-Operating-Linux/meta-tegra

repo_name: SOL-Space-Operating-Linux/meta-tegra

gha_language: BitBake


text:
@article{Bazil2016
,	title		= {Catalytic coupling of oxidative phosphorylation, {ATP} demand, and reactive oxygen species generation.}
,	author	= {J.N. Bazil and D.A. Beard and K.C. Vinnakota}
,	journal	= {Biophys J}
,	volume	= {110}
,	number	= {4}
,	pages	= {962--971}
,	year		= {2016}
,	DOI 		= {10.1016/j.bpj.2015.09.036 }
}

@article{Beard2005
,	title		= {A biophysical model of the mitochondrial respiratory system and oxidative phosphorylation.}
,	author	= {D.A. Beard}
,	journal	= {PLoS Comp Biol}
,	volume	= {1}
,	pages	= {e36}
,	year		= {2005}
,	DOI 		= {10.1371/journal.pcbi.0010036 }
}

@book{Beard2012
,	title		= {Biosimulation: Simulation of Living Systems}
,	author	= {D.A. Beard}
,	year		= {2012}
,	publisher 	= {Cambridge University Press}
}

@article{Chance1955
,	title		= {Respiratory enzymes in oxidative phosphorylation. I. Kinetics of oxygen utilization.}
,	author	= {B. Chance and G.R. Williams}
,	journal	= {J Biol Chem}
,	volume	= {217}
,	pages	= {383--935}
,	year		= {1955}
}

@article{Chance1985
,	title		= {Control of oxidative metabolism and oxygen delivery in human skeletal muscle: A steady-state analysis of the work/energy cost transfer function.}
,	author	= {B. Chance and S. Leigh Jr and B.J. Clark and J. Maris and J. Kent and S. Nioka and D. Smith}
,	journal	= {Proc Natl Acad Sci USA}
,	volume	= {82}
,	pages	= {8384--8388}
,	year		= {1985}
}

@article{Friedman2014
,	title		= {Mitochondrial form and function.}
,	author	= {J.R. Friedman and J. Nunnari}
,	journal	= {Nature}
,	volume	= {505}
,	number	= {7483}
,	pages	= {335-343}
,	year		= {2014}
,	DOI 		= {10.1038/nature12985 }
}

@article{Gao2019
,	title		= {Cardiac metabolic limitations contribute to diminished performance of the heart in aging.}
,	author	= {X. Gao and D.G. Jakovljevic and D.A. Beard}
,	journal	= {Biophys J}
,	volume	= {117}
,	pages	= {2295-2302}
,	year		= {2019}
,	DOI 		= {10.1016/j.bpj.2019.06.026 }
}

@article{Gnaiger2020
,	title		= {Mitochondrial physiology.}
,	author	= {E. Gnaiger}
,	journal	= {Bioenerg Commun}
,	year		= {2020}
,	DOI 		= {10.26124/mitofit:190001 }
}

@article{Li2011
,	title		= {A database of thermodynamic properties of the reactions of glycolysis, the tricarboxylic acid cycle, and the pentose phosphate pathway.}
,	author	= {X. Li and F. Wu and F. Qi and D.A. Beard}
,	journal	= {Database}
,	volume	= {2011}
,	pages	= {bar005}
,	year		= {2011}
,	DOI 		= {10.1093/database/bar005 }
}

@article{Lopez2020
,	title		= {Impaired myocardial energetics causes mechanical dysfunction in decompensated failing hearts.}
,	author	= {R. Lopez and B. Marzban and X. Gao and E. Lauinger and F. Van den Bergh and S.E. Whitesall and K. Converso-Baran and C.F. Burant and D.E. Michele and D.A. Beard}
,	journal	= {Function}
,	volume	= {1}
,	pages	= {zqaa018}
,	year		= {2020}
,	DOI 		= {10.1093/function/zqaa018 }
}

@article{Marzban2020
,	title		= {Computational modeling of coupled energetics and mechanics in the rat ventricular myocardium.}
,	author	= {B. Marzban and R. Lopez and D.A. Beard}
,	journal	= {Physiome}
,	year		= {2020}
,	DOI 		= {10.36903/physiome.12964970.v1 }
}

@article{Metelkin2006
,	title		= {Mathematical modeling of mitochondrial adenine nucleotide translocase.}
,	author	= {E. Metelkin and I. Goryanin and O. Demin}
,	journal	= {Biophys J}
,	volume 	= {90}
,	pages 	= {423--432}
,	year		= {2006}
,	DOI 		= {10.1529/biophysj.105.061986.}
}

@article{Mitchell1961
,	title		= {Coupling of phosphorylation to electron and hydrogen transfer by a chemi-osmotic type of mechanism.}
,	author	= {P. Mitchell}
,	journal	= {Nature}
,	volume	= {191}
,	pages	= {144-148}
,	year		= {1961}
,	DOI 		= {10.1038/191144a0 }
}

@book{Nicholls2013
,	title		= {Bioenergetics.}
,	author	= {D.G. Nicholls. and S.J. Ferguson}
,	year		= {2013}
,	publisher 	= {Academic Press, Elsevier, Amsterdam, The Netherlands}
,	isbn		= {9780123884312}
}

@article{Noor2013
,	title		= {A note on the kinetics of enzyme action: a decomposition that highlights thermodynamic effects.}
,	author	= {E. Noor and A. Flamholz and W. Liebermeister and A. Bar-Even and R. Milo}
,	journal	= {FEBS Letters}
,	volume	= {587}
,	pages	= {2772-2777}
,	year	= {2013}
,	DOI 	={ 10.1016/j.febslet.2013.07.028 }
}

@article{Picard2011
,	title	= {Mitochondrial Structure and Function Are Disrupted by Standard Isolation Methods.}
,	author	= {M. Picard and T. Taivassalo and D. Ritchie and K. Wright and M. M. Thomas and C. Romestaing and R. T. Hepple}
,	journal	= {PLoS One}
,	volume	= {6}
,	pages	= {e18317}
,	year	= {2011}
,	DOI 	={ 10.1371/journal.pone.0018317 }
}

@misc{Randall2021_code
,	 title = {QAMAS software}
,	 author = {E. B. Randall and M. Hock and R. Lopez and B. Marzban and C. Marshall and D.A. Beard}
, 	year = {2021}
, 	howpublished = {(Version 1.4)}
, 	DOI = {10.5281/zenodo.4919564}
}

@article{Vinnakota2011
,	title		= {Stimulatory effects of calcium on respiration and {NAD(P)H} synthesis in intact rat heart mitochondria utilizing physiological substrates cannot explain respiratory control in vivo}
,	author	= {K.C. Vinnakota and R.K. Dash and D.A. Beard}
,	journal	= {J Biol Chem}
,	volume	= {286}
,	number	= {35}
,	pages	= {30816-30822}
,	year		= {2011}
,	DOI 		= {10.1074/jbc.M111.242529 }
}

@article{Vinnakota2016
,	title		= {Open-loop control of oxidative phosphorylation in skeletal and cardiac muscle mitochondria by {Ca2+}.}
,	author	= {K.C. Vinnakota and A. Singhal and F. Van den Bergh and M. Bagher-Oskouei and R.W. Wiseman and D.A. Beard}
,	journal	= {Biophys J}
,	volume	= {110}
,	number	= {4}
,	pages	= {954-961}
,	year		= {2016}
,	DOI 		= {10.1016/j.bpj.2015.12.018 }
}

@article{Vinnakota2016_2
,	title		= {Feedback regulation and time hierarchy of oxidative phosphorylation in cardiac mitochondrian.}
,	author	= {K.C. Vinnakota and J.N. Bazil and F. Van den Bergh and R.W. Wiseman and D.A. Beard}
,	journal	= {Biophys J}
,	volume	= {110}
,	number	= {4}
,	pages	= {972-980}
,	year		= {2016}
,	DOI 		= {10.1016/j.bpj.2016.01.003 }
}

@article{Wu2007
,	title		= {Computer modeling of mitochondrial tricarboxylic acid cycle, oxidative phosphorylation, metabolite transport, and electrophysiology.}
,	author	= {F. Wu and F. Yang and K.C. Vinnakota and D.A. Beard}
,	journal	= {J Biol Chem}
,	volume	= {282}
,	pages	= {24525--24537}
,	year		= {2007}
,	DOI 		= {10.1074/jbc.M701024200 }
}

@article{Wu2007_2
,	title		= {Oxidative {ATP} synthesis in skeletal muscle is controlled by substrate feedback}
,	author	= {F. Wu and J.A.L. Jeneson and D.A. Beard}
,	journal	= {Am J Physiol Cell Physiol}
,	volume	= {292}
,	number	= {1}
,	pages	= {C115-C124}
,	year		= {2007}
,	DOI 		= {10.1152/ajpcell.00237.2006 }
}

@article{Wu2008
,	title		= {Phosphate metabolite concentrations and {ATP} hydrolysis potential in normal and ischaemic hearts.}
,	author	= {F. Wu and E.Y. Zhang and J. Zhang and R.J. Bache and D.A. Beard}
,	journal	= {J Physiol}
,	volume	= {586}
,	pages	= {4193--4208}
,	year		= {2008}
,	DOI 		= {10.1113/jphysiol.2008.154732 }
}

@article{Wu2009
,	title	= {Experimentally observed phenomena on cardiac energetics in heart failure emerge from simulations of cardiac metabolism}
,	author	= {F. Wu and J. Zhang and D.A. Beard}
,	journal	= {Proc Natl Acad Sci USA}
,	volume	= {106}
,	number	= {17}
,	pages	= {7143-7148}
,	year	= {2009}
,	DOI 	={ 10.1073/pnas.0812768106 }
}

gha_language: Jupyter Notebook


text:
@inproceedings {202263,
author = {Salman Niazi and Mahmoud Ismail and Seif Haridi and Jim Dowling and Steffen Grohsschmiedt and Mikael Ronstr{\"o}m},
title = {HopsFS: Scaling Hierarchical File System Metadata Using NewSQL Databases},
booktitle = {15th USENIX Conference on File and Storage Technologies (FAST 17)},
year = {2017},
isbn = {978-1-931971-36-2},
address = {Santa Clara, CA},
pages = {89--104},
url = {https://www.usenix.org/conference/fast17/technical-sessions/presentation/niazi},
publisher = {USENIX Association},
}


text:
@article{Sadeghian-2021-Effects,
    title = "Effects of quality controlled measured and re-analysed meteorological data on the performance of water temperature simulations",
    author = "Sadeghian, Amir  and
      Hudson, Jeff  and
      Lindenschmidt, Karl-Erich",
    journal = "Hydrological Sciences Journal, Volume 67, Issue 1",
    volume = "67",
    number = "1",
    year = "2021",
    publisher = "Informa UK Limited",
    url = "https://aclanthology.org/G21-68001",
    doi = "10.1080/02626667.2021.1994975",
    pages = "21--39",
}

repository: gwf-uwaterloo/gwf-publications

repo_name: gwf-uwaterloo/gwf-publications


text:
SUMMARY = "PiGarageDoor - A relay controlled raspberry pi garage door opener."
HOMEPAGE = "https://github.com/bvarner/meta-varnerized"
LICENSE = "MIT"

include images/varnerized-raspberrypi.bb

IMAGE_INSTALL += " \
    pigaragedoor \
"

export IMAGE_BASENAME = "pigaragedoor-image"

repository: Wave-Therapeutics/meta-varnerized

repo_name: Wave-Therapeutics/meta-varnerized


text:
DESCRIPTION = "SuperTux is a classic 2D jump'n run sidescroller game \
in a style similar to the original SuperMario games."
SECTION = "games"
PRIORITY = "optional"
DEPENDS = "virtual/libsdl libsdl-mixer libsdl-image"
MAINTAINER = "Michael 'Mickey' Lauer <mickey@Vanille.de>"
LICENSE = "GPL"

SRC_URI = "${SOURCEFORGE_MIRROR}/super-tux/supertux-${PV}.tar.bz2 \
           http://ssel.vub.ac.be/Members/DennisWagelaar/download/zaurus/supertux-0.1.2-fp.patch.gz;patch=1"

inherit autotools

# FIXME: Add .desktop file for Opie/Qtopia

repository: Terentyev/familiar-linux

repo_name: Terentyev/familiar-linux


text:
@article{sprouse:2012,
  title={Assessing the reliability of textbook data in syntax: Adger's Core Syntax},
  author={Sprouse, Jon and Almeida, Diogo},
  journal={Journal of Linguistics},
  volume={48},
  number={3},
  pages={609--652},
  year={2012},
  publisher={Cambridge University Press},
  abstract={There has been a consistent pattern of criticism of the reliability of acceptability judgment data in syntax for at least 50 years (e.g., Hill 1961), culminating in several high-profile criticisms within the past ten years (Edelman & Christiansen 2003, Ferreira 2005, Wasow & Arnold 2005, Gibson & Fedorenko 2010, in press). The fundamental claim of these critics is that traditional acceptability judgment collection methods, which tend to be relatively informal compared to methods from experimental psychology, lead to an intolerably high number of false positive results. In this paper we empirically assess this claim by formally testing all 469 (unique, US-English) data points from a popular syntax textbook (Adger 2003) using 440 naïve participants, two judgment tasks (magnitude estimation and yes–no), and three different types of statistical analyses (standard frequentist tests, linear mixed effects models, and Bayes factor analyses). The results suggest that the maximum discrepancy between traditional methods and formal experimental methods is 2%. This suggests that even under the (likely unwarranted) assumption that the discrepant results are all false positives that have found their way into the syntactic literature due to the shortcomings of traditional methods, the minimum replication rate of these 469 data points is 98%. We discuss the implications of these results for questions about the reliability of syntactic data, as well as the practical consequences of these results for the methodological options available to syntacticians.}
}

gha_language: CSS


text:
file(REMOVE_RECURSE
  "CMakeFiles/ccn-lite-fetch.dir/src/ccn-lite-fetch.c.o"
  "../bin/ccn-lite-fetch.pdb"
  "../bin/ccn-lite-fetch"
)

# Per-language clean rules from dependency scanning.
foreach(lang C)
  include(CMakeFiles/ccn-lite-fetch.dir/cmake_clean_${lang}.cmake OPTIONAL)
endforeach()

license: ISC


text:
SUMMARY = "gd is a library used to create PNG, JPEG, or WBMP images"
DESCRIPTION = "The gd graphics library allows your code to quickly draw images \
complete with lines, arcs, text, multiple colors, cut and paste from other \
images, and flood fills, and to write out the result as a PNG or JPEG file. \
This is particularly useful in Web applications, where PNG and JPEG are two \
of the formats accepted for inline images by most browsers. Note that gd is not \
a paint program."
HOMEPAGE = "http://libgd.github.io/"

SECTION = "libs"
LICENSE = "GD"
LIC_FILES_CHKSUM = "file://COPYING;md5=ace63adfdac78400fc30fa22ee9c1bb1"

DEPENDS = "freetype libpng jpeg zlib tiff"

SRC_URI = "git://github.com/libgd/libgd.git;nobranch=1;protocol=https \
           file://0001-Fix-deprecared-function-prototypes.patch \
           "

SRCREV = "b5319a41286107b53daa0e08e402aa1819764bdc"

S = "${WORKDIR}/git"

inherit autotools binconfig gettext pkgconfig

EXTRA_OECONF += " --disable-rpath \
                  --with-jpeg=${STAGING_LIBDIR}/.. \
                  --with-freetype=yes \
                  --without-fontconfig \
                  --without-webp \
                  --without-xpm \
                  --without-x \
                "

EXTRA_OEMAKE = 'LDFLAGS="${LDFLAGS}"'

DEBUG_OPTIMIZATION:append = " -Wno-error=maybe-uninitialized"

do_install:append:class-target() {
    # cleanup buildpaths from gdlib.pc
    sed -i -e 's#${STAGING_DIR_HOST}##g' ${D}${libdir}/pkgconfig/gdlib.pc
}

PACKAGES += "${PN}-tools"

FILES:${PN} = "${libdir}/lib*${SOLIBS}"
FILES:${PN}-tools = "${bindir}/*"

PROVIDES += "${PN}-tools"
RPROVIDES:${PN}-tools = "${PN}-tools"
RDEPENDS:${PN}-tools = "perl perl-module-strict"

CVE_PRODUCT = "libgd"

BBCLASSEXTEND = "native nativesdk"

repository: openembedded/meta-openembedded

repo_name: openembedded/meta-openembedded


text:
DESCRIPTION = "Library for reading some sort of media format."
SECTION = "libs"
PRIORITY = "optional"
DEPENDS = ""
LICENSE = "LGPL"
inherit autotools

SRC_URI = "${SOURCEFORGE_MIRROR}/faac/${PN}-${PV}.tar.gz"
S="${WORKDIR}/${PN}"

PACKAGES = "${PN}-dbg ${PN} lib${PN} lib${PN}-dev"

FILES_${PN} = " ${bindir}/faac "
FILES_lib${PN} = " ${libdir}/libfaac.so.0 ${libdir}/libfaac.so.0.0.0 "
FILES_lib${PN}-dev = " ${includedir}/faac.h ${includedir}/faaccfg.h ${libdir}/libfaac.so ${libdir}/libfaac.la ${libdir}/libfaac.a "

do_stage() {
	oe_libinstall -a -so -C libfaac libfaac ${STAGING_LIBDIR}
	install -m 0644 ${S}/include/faac.h ${STAGING_INCDIR}/
	install -m 0644 ${S}/include/faaccfg.h ${STAGING_INCDIR}/
}


text:
require mender-monitor.inc

PV = "master-git"

# Source directly the repo, override name
S = "${WORKDIR}/monitor-client"

# Skip version check
MENDER_DEVMODE = "true"

# Downprioritize this recipe in version selections.
DEFAULT_PREFERENCE = "-1"

repository: killakhang/meta-mender

repo_name: killakhang/meta-mender


text:
import { SAVE_SECTION } from './actions';

const initialState = {
  section: {},
};

export default function reducer(state = initialState, action = {}) {
  switch (action.type) {
    // focus action is dispatched when a new screen comes into focus
    case SAVE_SECTION:
      return {
        ...state,
        section: action.section,
      };

    default:
      return state;
  }
}

repository: AngusChiang/growth

repo_name: AngusChiang/growth

gha_license_id: NOASSERTION

gha_language: JavaScript


text:
SUMMARY = "conservative garbage collector for C and C++"
DESCRIPTION = "oehm-Demers-Weiser's GC is a garbage collecting storage allocator that is\n\
 intended to be used as a plug-in replacement for C's malloc or C++'s new().\n\
 .\n\
 It allows you to allocate memory basically as you normally would without\n\
 explicitly deallocating memory that is no longer useful. The collector\n\
 automatically recycles memory when it determines that it can no longer be\n\
 used.\n\
 .\n\
 This version of the collector is thread safe, has C++ support and uses the\n\
 defaults for everything else. However, it does not work as a drop-in malloc(3)\n\
 replacement."
HOMEPAGE = "http://www.hpl.hp.com/personal/Hans_Boehm/gc/"

PR = "r0"
inherit debian-package
PV = "7.2d"

LICENSE = "MIT"
LIC_FILES_CHKSUM = "file://doc/README;endline=37;md5=9f4fd307082acf7a8af3e3897245163b"
inherit autotools pkgconfig

# base on debian/rules
EXTRA_OECONF += "--enable-cplusplus -disable-dependency-tracking \
                 --with-tags=CXX --datadir=${docdir}"
PACKAGECONFIG ??= ""
PACKAGECONFIG[libatomic-ops] = "--with-libatomic-ops=yes,--with-libatomic-ops=no,libatomic-ops"

do_install_append() {
	# remove unwanted files
	rm -rf ${D}${libdir}/libcord*
}
PKG_${PN} = "${PN}1c2"
RPROVIDES_${PN} += "${PN}1c2"
BBCLASSEXTEND = "native"

repository: manut/meta-combo

repo_name: manut/meta-combo

branch_name: refs/heads/morty