text:
92},
	file = {Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/HKJJR5SQ/Rochet and Benoît - 2012 - Fishing destabilizes the biomass flow in the marin.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/KAIN2W58/284.html:text/html}
}

@article{winemiller:patterns:1992,
	title = {Patterns of life-history diversification in {North} {American} fishes: implications for population regulation},
	volume = {49},
	shorttitle = {Patterns of life-history diversification in {North} {American} fishes},
	url = {http://www.nrcresearchpress.com/doi/abs/10.1139/f92-242},
	number = {10},
	urldate = {2014-02-24},
	journal = {Canadian Journal of Fisheries and Aquatic Sciences},
	author = {Winemiller, Kirk O. and Rose, Kenneth A.},
	year = {1992},
	pages = {2196--2218},
	file = {Winemiller:Rose:1992:CJFAS.pdf:/Users/phil/Dropbox/biblio/zotero/storage/F7T9JSDQ/Winemiller:Rose:1992:CJFAS.pdf:application/pdf}
}

@article{cheung:integrating:2011,
	title = {Integrating ecophysiology and plankton dynamics into projected maximum fisheries catch potential under climate change in the {Northeast} {Atlantic}},
	volume = {68},
	url = {http://icesjms.oxfordjournals.org/content/68/6/1008.short},
	number = {6},
	urldate = {2014-02-24},
	journal = {ICES Journal of Marine Science: Journal du Conseil},
	author = {Cheung, William WL and Dunne, John and Sarmiento, Jorge L. and Pauly, Daniel},
	year = {2011},
	keywords = {biogeochemistry, climate change, fisheries catch, Northeast Atlantic, ocean acidification, oxygen, range shift},
	pages = {1008--1018},
	file = {Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/KMR6S6SM/Cheung et al. - 2011 - Integrating ecophysiology and plankton dynamics in.pdf:application/pdf;Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/SNNK5HAE/Cheung et al. - 2011 - Integrating ecophysiology and plankton dynamics in.pdf:application/pdf;[HTML] from oxfordjournals.org:/Users/phil/Dropbox/biblio/zotero/storage/ZB83IECB/1008.html:text/html;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/7U2XW6WW/1008.html:text/html;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/7VFHCI2C/1008.html:text/html;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/WFUXSCJT/1008.html:text/html}
}

@article{jennings:use:2002,
	title = {Use of size-based production and stable isotope analyses to predict trophic transfer efficiencies and predator-prey body mass ratios in food webs},
	volume = {240},
	url = {http://www.int-res.com/articles/meps2002/240/m240p011.pdf},
	urldate = {2014-05-30},
	journal = {Marine Ecology Progress Series},
	author = {Jennings, Simon and Warr, Karema J. and Mackinson, Steve},
	year = {2002},
	pages = {11--20},
	file = {[PDF] from int-res.com:/Users/phil/Dropbox/biblio/zotero/storage/JEVA67C7/Jennings et al. - 2002 - Use of size-based production and stable isotope an.pdf:application/pdf}
}

@article{barnes:global:2010,
	title = {Global patterns in predator-prey size relationships reveal size dependency of trophic transfer efficiency},
	volume = {91},
	url = {http://www.esajournals.org/doi/abs/10.1890/08-2061.1},
	number = {1},
	urldate = {2014-05-30},
	journal = {Ecology},
	author = {Barnes, Carolyn and Maxwell, David and Reuman, Daniel C. and Jennings, Simon},
	year = {2010},
	pages = {222--232},
	file = {Barnes et al 2010 Ecology PPMR Analysis.pdf:/Users/phil/Dropbox/biblio/zotero/storage/WP44QF33/Barnes et al 2010 Ecology PPMR Analysis.pdf:application/pdf;[PDF] from researchgate.net:/Users/phil/Dropbox/biblio/zotero/storage/P67USJN7/Barnes et al. - 2010 - Global patterns in predator-prey size relationship.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/JP3UWF33/cookieAbsent.html:text/html}
}

@article{cheung:shrinking:2013,
	title = {Shrinking of fishes exacerbates impacts of global ocean changes on marine ecosystems},
	volume = {3},
	url = {http://www.nature.com/nclimate/journal/v3/n3/full/nclimate1691.html},
	number = {3},
	urldate = {2014-02-24},
	journal = {Nature Climate Change},
	author = {Cheung, William WL and Sarmiento, Jorge L. and Dunne, John and Frölicher, Thomas L. and Lam, Vicky WY and Palomares, ML Deng and Watson, Reg and Pauly, Daniel},
	year = {2013},
	pages = {254--258},
	file = {Climate change affecting fish size and distribution.pdf:/Users/phil/Dropbox/biblio/zotero/storage/RJH8IXT3/Climate change affecting fish size and distribution.pdf:application/pdf;[PDF] from uidaho.edu:/Users/phil/Dropbox/biblio/zotero/storage/IATPT2FZ/Cheung et al. - 2013 - Shrinking of fishes exacerbates impacts of global .pdf:application/pdf;[PDF] from yimg.com:/Users/phil/Dropbox/biblio/zotero/storage/3Q7CIWUQ/Cheung et al. - 2012 - Shrinking of fishes exacerbates impacts of global .pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/HR7REK6P/nclimate1691.html:text/html}
}

@article{rossberg:stockrecruitment:2013,
	title = {Stock–recruitment relations controlled by feeding interactions alone},
	volume = {70},
	url = {http://www.nrcresearchpress.com/doi/abs/10.1139/cjfas-2012-0531},
	number = {10},
	urldate = {2015-02-05},
	journal = {Canadian Journal of Fisheries and Aquatic Sciences},
	author = {Rossberg, Axel G. and Houle, Jennifer E. and Hyder, Kieran},
	year = {2013},
	pages = {1447--1455},
	file = {Rossberg2013CJFAS:StockRecruitmentFromFeedingAlone.pdf:/Users/phil/Dropbox/biblio/zotero/storage/CFPZPQU6/Rossberg2013CJFAS:StockRecruitmentFromFeedingAlone.pdf:application/pdf}
}

  @Manual{Rue:INLA:2014,
    title = {INLA: Functions which allow to perform full Bayesian analysis of
latent Gaussian models using Integrated Nested Laplace
Approximaxion},
    author = {Havard Rue and Sara Martino and Finn Lindgren and Daniel Simpson and Andrea Riebler and Elias Teixeira Krainski},
    year = {2014},
    note = {R package version 0.0-1415716338},
  }

@article{hartvig:food:2011,
	title = {Food web framework for size-structured populations},
	volume = {272},
	url = {http://www.sciencedirect.com/science/article/pii/S0022519310006612},
	number = {1},
	urldate = {2015-01-06},
	journal = {Journal of Theoretical Biology},
	author = {Hartvig, Martin and Andersen, Ken H. and Beyer, Jan E.},
	year = {2011},
	pages = {113--122},
	file = {[PDF] from arxiv.org:/Users/phil/Dropbox/biblio/zotero/storage/FP7XVAN3/Hartvig et al. - 2011 - Food web framework for size-structured populations.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/JQ53ED4B/S0022519310006612.html:text/html}
}

@article{thorpe:evaluation:2014,
	title = {Evaluation and management implications of uncertainty in a multi-species size-structured model of population and community responses to fishing},
	copyright = {This article is protected by copyright. All rights reserved.},
	issn = {2041-210X},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12292/abstract},
	doi = {10.1111/2041-210X.12292},
	abstract = {1.Implementation of an ecosystem approach to fisheries requires advice on trade-offs among fished species and between fisheries yields and biodiversity or food web properties. However, the lack of explicit representation, analysis and consideration of uncertainty in most multi-species models has limited their application in analyses that could support management advice. 2.We assessed the consequences of parameter uncertainty by developing 78125 multi-species size-structured fish community models, with all combinations of parameters drawn from ranges that spanned parameter values estimated from data and literature. This unfiltered ensemble was reduced to 188 plausible models, the filtered ensemble (FE), by screening outputs against fish abundance data and ecological principles such as requiring species’ persistence. 3.Effects of parameter uncertainty on estimates of single species management reference points for fishing mortality (FMSY, fishing mortality rate providing MSY, the maximum sustainable yield) and biomass (BMSY, biomass at MSY) were evaluated by calculating probability distributions of estimated reference points with the FE. There was a 50\% probability that multispecies FMSY could be estimated to within ±25\% of its actual value, and a 50\% probability that BMSY could be estimated to within ±40\% of its actual value. 4.Signal to noise ratio was assessed for four community indicators when mortality rates were reduced from current rates to FMSY. The slope of the community size spectrum showed the greatest signal to noise ratio, indicating that it would be the most responsive indicator to the change in fishing mortality F. Further, the power of an ongoing international monitoring survey to detect predicted responses of size-spectrum slope was higher than for other size-based metrics. 5.Synthesis and applications: Application of the ensemble model approach allows explicit representation of parameter uncertainty and supports advice and management by (i) providing uncertainty intervals for management reference points, (ii) estimating working values of reference points that achieve a defined reduction in risk of not breaching the true reference point, (iii) estimating the responsiveness of population, community, food-web and biodiversity indicators to changes in F, (iv) assessing the performance of indicators and monitoring programmes and (v) identifying priorities for data collection and changes to model structure to reduce uncertainty. This article is protected by copyright. All rights reserved.},
	language = {en},
	urldate = {2014-11-26},
	journal = {Methods in Ecology and Evolution},
	author = {Thorpe, R B. and Le Quesne, W J F. and Luxford, F. and Collie, J S. and Jennings, S.},
	month = oct,
	year = {2014},
	keywords = {Biodiversity, ecosystem-based management, fish community, fisheries, food web, large fish indicator, large fish indicator (LFI), power analysis, risk, size-based, trade-off},
	pages = {n/a--n/a},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/3K9ANSR7/abstract.html:text/html;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/UE9RAXQX/abstract.html:text/html;Thorpe et al. - 2014 - Evaluation and management implications of uncertai.pdf:/Users/phil/Dropbox/biblio/zotero/storage/FFH2K5T2/Thorpe et al. - 2014 - Evaluation and management implications of uncertai.pdf:application/pdf}
}

@article{marshall:how:2015,
	title = {How to {Curate} {Your} {Digital} {Identity}  as an {Academic}},
	issn = {0009-5982},
	url = {http://chronicle.com/article/How-to-Curate-Your-Digital/151001/},
	urldate = {2015-01-07},
	journal = {The Chronicle of Higher Education},
	author = {Marshall, Kelli},
	month = jan,
	year = {2015},
	file = {Chronicle of Higher Education Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/9QQJEMUW/151001.html:text/html}
}

@inproceedings{thygesen:how:2005,
	title = {How optimal life history changes with the community size-spectrum},
	volume = {272},
	url = {http://www.researchgate.net/profile/Uffe:Thygesen/publication/7738845:How:optimal:life:history:changes:with:the:community:size-spectrum/links/0c960521cdcd1018aa000000.pdf},
	urldate = {2015-02-16},
	booktitle = {Proc. {R}. {Soc}. {B}},
	author = {Thygesen, Uffe Høgsbro and Farnsworth, Keith D. and Andersen, Ken Haste and Beyer, Jan E.},
	year = {2005},
	pages = {1323--1331},
	file = {[PDF] from researchgate.net:/Users/phil/Dropbox/biblio/zotero/storage/XJUSQ6D9/Thygesen et al. - 2005 - How optimal life history changes with the communit.pdf:application/pdf}
}

@article{winemiller:why:1993,
	title = {Why do most fish produce so many tiny offspring?},
	url = {http://www.jstor.org/stable/2462862},
	urldate = {2015-02-19},
	journal = {American Naturalist},
	author = {Winemiller, Kirk O. and Rose, Kenneth A.},
	year = {1993},
	pages = {585--603}
}

@article{barneche:scaling:2014,
	title = {Scaling metabolism from individuals to reef-fish communities at broad spatial scales},
	volume = {17},
	copyright = {© 2014 John Wiley \& Sons Ltd/CNRS},
	issn = {1461-0248},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/ele.12309/abstract},
	doi = {10.1111/ele.12309},
	abstract = {Fishes contribute substantially to energy and nutrient fluxes in reef ecosystems, but quantifying these roles is challenging. Here, we do so by synthesising a large compilation of fish metabolic-rate data with a comprehensive database on reef-fish community abundance and biomass. Individual-level analyses support predictions of Metabolic Theory after accounting for significant family-level variation, and indicate that some tropical reef fishes may already be experiencing thermal regimes at or near their temperature optima. Community-level analyses indicate that total estimated respiratory fluxes of reef-fish communities increase on average {\textasciitilde}2-fold from 22 to 28 °C. Comparisons of estimated fluxes among trophic groups highlight striking differences in resource use by communities in different regions, perhaps partly reflecting distinct evolutionary histories, and support the hypothesis that piscivores receive substantial energy subsidies from outside reefs. Our study demonstrates one approach to synthesising individual- and community-level data to establish broad-scale trends in contributions of biota to ecosystem dynamics.},
	language = {en},
	number = {9},
	urldate = {2015-02-18},
	journal = {Ecology Letters},
	author = {Barneche, D. R. and Kulbicki, M. and Floeter, S. R. and Friedlander, A. M. and Maina, J. and Allen, A. P.},
	month = sep,
	year = {2014},
	keywords = {acclimation, Allometry, climate change, coral reef, ecosystem function, food web, metabolic theory of ecology},
	pages = {1067--1076},
	file = {[PDF] from researchgate.net:/Users/phil/Dropbox/biblio/zotero/storage/97QWMA7A/Barneche et al. - 2014 - Scaling metabolism from individuals to reef-fish c.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/9WSN45DE/abstract.html:text/html;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/U74UGFNF/full.html:text/html}
}

@article{andersen:life-history:2008,
	title = {Life-history constraints on the success of the many small eggs reproductive strategy},
	volume = {73},
	url = {http://izt.ciens.ucv.ve/ecologia/Archivos/ECOLOGIA:DE%20:POBLACIONES:Hasta%202004/ECO:POB%202008/ECOPO2:2008/Andersen%20y%20col%202008.pdf},
	urldate = {2015-02-19},
	journal = {Theoretical Population Biology},
	author = {Andersen, K. H. and Beyer, J. E. and Pedersen, M. and Andersen, N. G. and Gislason, H.},
	year = {2008},
	pages = {490--497},
	file = {Andersen et al. - 2008 - Life-history constraints on the success of the man.pdf:/Users/phil/Dropbox/biblio/zotero/storage/IIH7VENE/Andersen et al. - 2008 - Life-history constraints on the success of the man.pdf:application/pdf}
}

@article{reum:season:2012,
	title = {Season and prey type influence size dependency of predator- prey body mass ratios in a marine fish assemblage},
	url = {http://ir.library.oregonstate.edu/xmlui/handle/1957/35096},
	urldate = {2015-03-02},
	author = {Reum, Jonathan CP and Hunsicker, Mary E.},
	year = {2012},
	file = {[PDF] from oregonstate.edu:/Users/phil/Dropbox/biblio/zotero/storage/ZX629ZT5/Reum and Hunsicker - 2012 - Season and prey type influence size dependency of .pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/737EM6IP/35096.html:text/html}
}

@article{fernandes:modelling:2013,
	title = {Modelling the effects of climate change on the distribution and production of marine fishes: accounting for trophic interactions in a dynamic bioclimate envelope model},
	volume = {19},
	shorttitle = {Modelling the effects of climate change on the distribution and production of marine fishes},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/gcb.12231/full},
	number = {8},
	urldate = {2015-03-03},
	journal = {Global change biology},
	author = {Fernandes, Jose A. and Cheung, William WL and Jennings, Simon and Butenschön, Momme and Mora, Lee and Frölicher, Thomas L. and Barange, Manuel and Grant, Alastair},
	year = {2013},
	pages = {2596--2607},
	file = {[PDF] from researchgate.net:/Users/phil/Dropbox/biblio/zotero/storage/3WNIB3H3/Fernandes et al. - 2013 - Modelling the effects of climate change on the dis.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/W9QUWW3N/full.html:text/html}
}

@article{tunney:effects:2014,
	title = {Effects of differential habitat warming on complex communities},
	volume = {111},
	issn = {0027-8424, 1091-6490},
	url = {http://www.pnas.org/content/111/22/8077},
	doi = {10.1073/pnas.1319618111},
	abstract = {Food webs unfold across a mosaic of micro and macro habitats, with each habitat coupled by mobile consumers that behave in response to local environmental conditions. Despite this fundamental characteristic of nature, research on how climate change will affect whole ecosystems has overlooked (i) that climate warming will generally affect habitats differently and (ii) that mobile consumers may respond to this differential change in a manner that may fundamentally alter the energy pathways that sustain ecosystems. This reasoning suggests a powerful, but largely unexplored, avenue for studying the impacts of climate change on ecosystem functioning. Here, we use lake ecosystems to show that predictable behavioral adjustments to local temperature differentials govern a fundamental structural shift across 54 food webs. Data show that the trophic pathways from basal resources to a cold-adapted predator shift toward greater reliance on a cold-water refuge habitat, and food chain length increases, as air temperatures rise. Notably, cold-adapted predator behavior may substantially drive this decoupling effect across the climatic range in our study independent of warmer-adapted species responses (for example, changes in near-shore species abundance and predator absence). Such modifications reflect a flexible food web architecture that requires more attention from climate change research. The trophic pathway restructuring documented here is expected to alter biomass accumulation, through the regulation of energy fluxes to predators, and thus potentially threatens ecosystem sustainability in times of rapid environmental change.},
	language = {en},
	number = {22},
	urldate = {2015-03-03},
	journal = {Proceedings of the National Academy of Sciences},
	author = {Tunney, Tyler D. and McCann, Kevin S. and Lester, Nigel P. and Shuter, Brian J.},
	month = jun,
	year = {2014},
	pmid = {24843178},
	keywords = {habitat coupling, heterogeneity, Species interactions, thermoregulation, trophic structure},
	pages = {8077--8082},
	file = {Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/PIC689EM/Tunney et al. - 2014 - Effects of differential habitat warming on complex.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/94VVDM64/8077.html:text/html}
}

@Manual{Boettiger:rfishbase:2015,
    title = {rfishbase: R Interface to 'FishBase'},
    author = {Carl Boettiger and Scott Chamberlain and Duncan {Temple Lang} and Peter Wainwright},
    year = {2015},
    note = {R package version 2.0.3.99},
    url = {https://github.com/ropensci/rfishbase},
  }

@Article{Chamberlain:taxize:2013,
  title = {taxize - taxonomic search and retrieval in R},
  journal = {F1000Research},
  author = {Scott Chamberlain and Eduard Szocs},
  year = {2013},
  url = {http://f1000research.com/articles/2-191/v2},
}

@Manual{Chamberlain:taxize:2014,
  title = {taxize: Taxonomic information from around the web},
  author = {Scott Chamberlain and Eduard Szocs and Carl Boettiger and Karthik Ram and Ignasi Bartomeus and John Baumgartner},
  year = {2014},
  note = {R package version 0.3.0},
  url = {https://github.com/ropensci/taxize},
}

@article{gilbert:bioenergetic:2014,
	title = {A bioenergetic framework for the temperature dependence of trophic interactions},
	volume = {17},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/ele.12307/full},
	number = {8},
	urldate = {2015-03-03},
	journal = {Ecology letters},
	author = {Gilbert, Benjamin and Tunney, Tyler D. and McCann, Kevin S. and DeLong, John P. and Vasseur, David A. and Savage, Van and Shurin, Jonathan B. and Dell, Anthony I. and Barton, Brandon T. and Harley, Christopher DG and {others}},
	year = {2014},
	pages = {902--914},
	file = {[PDF] from researchgate.net:/Users/phil/Dropbox/biblio/zotero/storage/DMR5F797/Gilbert et al. - 2014 - A bioenergetic framework for the temperature depen.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/2EWPP4NM/full.html:text/html}
}

@article{jacobsen:comparing:????,
	title = {comparing ecosystem models\:draft\:nsj.pdf},
	volume = {draft},
	author = {Jacobsen, N. S. and Essington, T. E. and Andersen, K.H},
	file = {comparing ecosystem models:draft:nsj.pdf:/Users/phil/Dropbox/biblio/zotero/storage/NQUCRP8A/comparing ecosystem models:draft:nsj.pdf:application/pdf}
}

@article{andersen:damped:2010,
	title = {Damped trophic cascades driven by fishing in model marine ecosystems},
	volume = {277},
	issn = {0962-8452, 1471-2954},
	url = {http://rspb.royalsocietypublishing.org/cgi/doi/10.1098/rspb.2009.1512},
	doi = {10.1098/rspb.2009.1512},
	language = {en},
	number = {1682},
	urldate = {2015-04-28},
	journal = {Proceedings of the Royal Society B: Biological Sciences},
	author = {Andersen, K. H. and Pedersen, M.},
	month = mar,
	year = {2010},
	pages = {795--802},
	file = {rspb.2009.1512.full.pdf:/Users/phil/Dropbox/biblio/zotero/storage/XV9PC326/rspb.2009.1512.full.pdf:application/pdf}
}

@incollection{castle:predicted:2011,
	title = {Predicted {Effects} of {Behavioural} {Movement} and {Passive} {Transport} on {Individual} {Growth} and {Community} {Size} {Structure} in {Marine} {Ecosystems}},
	volume = {45},
	isbn = {978-0-12-386475-8},
	url = {http://linkinghub.elsevier.com/retrieve/pii/B9780123864758000022},
	language = {en},
	urldate = {2015-04-28},
	booktitle = {Advances in {Ecological} {Research}},
	publisher = {Elsevier},
	author = {Castle, Matthew D. and Blanchard, Julia L. and Jennings, Simon},
	year = {2011},
	pages = {41--66},
	file = {Castle, Blanchard, Jennings - 2011 - The Role of Body Size in Multispecies Systems.pdf:/Users/phil/Dropbox/biblio/zotero/storage/M9MSWEB3/Castle, Blanchard, Jennings - 2011 - The Role of Body Size in Multispecies Systems.pdf:application/pdf}
}

@article{harfoot:emergent:2014,
	title = {Emergent {Global} {Patterns} of {Ecosystem} {Structure} and {Function} from a {Mechanistic} {General} {Ecosystem} {Model}},
	volume = {12},
	issn = {1545-7885},
	url = {http://dx.plos.org/10.1371/journal.pbio.1001841},
	doi = {10.1371/journal.pbio.1001841},
	language = {en},
	number = {4},
	urldate = {2015-04-28},
	journal = {PLoS Biology},
	author = {Harfoot, Michael B. J. and Newbold, Tim and Tittensor, Derek P. and Emmott, Stephen and Hutton, Jon and Lyutsarev, Vassily and Smith, Matthew J. and Scharlemann, Jörn P. W. and Purves, Drew W.},
	editor = {Loreau, Michel},
	month = apr,
	year = {2014},
	pages = {e1001841},
	file = {harfoot.2014.pdf:/Users/phil/Dropbox/biblio/zotero/storage/IS2CISUS/harfoot.2014.pdf:application/pdf}
}

@article{boyce:mice:2015,
	title = {From mice to elephants: overturning the ‘one size fits all’ paradigm in marine plankton food chains},
	issn = {1461023X},
	shorttitle = {From mice to elephants},
	url = {http://doi.wiley.com/10.1111/ele.12434},
	doi = {10.1111/ele.12434},
	language = {en},
	urldate = {2015-04-28},
	journal = {Ecology Letters},
	author = {Boyce, Daniel G. and Frank, Kenneth T. and Leggett, William C.},
	editor = {Wootton, Tim},
	month = apr,
	year = {2015},
	pages = {n/a--n/a},
	file = {Boyce et al. - 2015 - From mice to elephants overturning the ‘one size .pdf:/Users/phil/Dropbox/biblio/zotero/storage/BWVEX2C3/Boyce et al. - 2015 - From mice to elephants overturning the ‘one size .pdf:application/pdf}
}

@article{gaston:macrophysiology::????,
	title = {Macrophysiology: {A} {Conceptual} {Reunification}},
	shorttitle = {Macrophysiology},
	url = {http://www.zoology.ubc.ca/bdg/pdfs:bdg/2014Spring/Gaston:et:am:Nat:2009.pdf},
	urldate = {2015-06-09},
	author = {Gaston, Kevin J. and Chown, Steven L. and Calosi, Piero and Bernardo, Joseph and Bilton, David T. and Clarke, Andrew and Clusella-Trullas, Susana and Ghalambor, Cameron K. and Konarzewski, Marek and Peck, Lloyd S. and {others}},
	file = {[PDF] from ubc.ca:/Users/phil/Dropbox/biblio/zotero/storage/9V23QJJF/Gaston et al. - Macrophysiology A Conceptual Reunification.pdf:application/pdf}
}

@article{gaston:macrophysiology::????-1,
	title = {Macrophysiology: {A} {Conceptual} {Reunification}},
	shorttitle = {Macrophysiology},
	url = {http://biol-chem.uwb.edu.pl/IP/POL/BIOLOGIA/pdf/Am:Nat:Macro.pdf},
	urldate = {2015-06-08},
	author = {Gaston, Kevin J. and Chown, Steven L. and Calosi, Piero and Bernardo, Joseph and Bilton, David T. and Clarke, Andrew and Clusella-Trullas, Susana and Ghalambor, Cameron K. and Konarzewski, Marek and Peck, Lloyd S. and {others}}
}

@article{scharf:predator:2000,
	title = {Predator size-prey size relationships of marine fish predators: interspecific variation and effects of ontogeny and body size on trophic-niche breadth},
	volume = {208},
	shorttitle = {Predator size-prey size relationships of marine fish predators},
	url = {http://www.int-res.com/abstracts/meps/v208/p229-248/},
	doi = {10.3354/meps208229},
	abstract = {ABSTRACT: We utilized a long-term data base collected over a broad geographic range to examine predator size-prey size relationships for 18 species of marine fish predators from continental shelf waters off the northeast US coast. Regression analysis was used to illustrate interspecific variation in ontogenetic patterns of prey size use, gape allometries, and ratio-based trophic niche breadths. Size-based feeding strategies were assessed through comparison of frequency distributions of relative prey sizes eaten and were related to general predator feeding tactics and gape morphology. The results demonstrated that the range of prey sizes eaten expanded with increasing predator body size for each of the marine predators examined, leading to asymmetric predator size-prey size distributions. Absolute maximum prey size and slopes of maximum prey size versus predator size varied widely among predator taxa. Distinct size-based feeding strategies were evident, as diets of some predators were dominated by prey that were 10 to 20\% of predator size, whereas other predators frequently consumed prey {\textgreater}50\% of predator size. Gape sizes and allometric relationships with body size were also diverse among predators and often were closely associated with maximum prey sizes. Ratio-based trophic-niche breadths generally did not expand with predator ontogeny and tended to narrow for the largest predators, which may be common for animal taxa.},
	urldate = {2015-09-14},
	journal = {Marine Ecology Progress Series},
	author = {Scharf, Frederick S. and Juanes, Francis and Rountree, Rodney A.},
	month = dec,
	year = {2000},
	pages = {229--248},
	file = {Marine Ecology Progress Series Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/HUFV5X26/Scharf et al. - 2000 - Predator size-prey size relationships of marine fi.pdf:application/pdf;Marine Ecology Progress Series Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/Q7GK5KRU/p229-248.html:text/html}
}

@article{pinnegar:does:2003,
	title = {Does diet in {Celtic} {Sea} fishes reflect prey availability?},
	volume = {63},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1095-8649.2003.00204.x/full},
	number = {s1},
	urldate = {2015-09-14},
	journal = {Journal of Fish Biology},
	author = {Pinnegar, J. K. and Trenkel, V. M. and Tidd, A. N. and Dawson, W. A. and {others}},
	year = {2003},
	pages = {197--212},
	file = {[PDF] from ifremer.fr:/Users/phil/Dropbox/biblio/zotero/storage/7JV6PBCA/Pinnegar et al. - 2003 - Does diet in Celtic Sea fishes reflect prey availa.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/R98RIKBV/full.html:text/html}
}

@book{:role:2011,
	title = {The {Role} of {Body} {Size} in {Multispecies} {Systems}},
	isbn = {978-0-12-386476-5},
	abstract = {The general theme is being based around the ongoing European Science Foundation SIZEMIC Research Network, which has been running for several years. The network has focused on the role of body size in ecosystems and embraces a wide remit that spans all ecosystem types and a range of disciplines, from theoretical to applied ecology.Updates and informs the reader on the latest research findingsWritten by leading experts in the fieldHighlights areas for future investigation},
	language = {en},
	publisher = {Academic Press},
	month = sep,
	year = {2011},
	keywords = {Science / Environmental Science, Science / Life Sciences / Ecology}
}

@article{nakazawa:scale:2011,
	title = {Scale dependence of predator–prey mass ratio: determinants and applications},
	volume = {45},
	shorttitle = {Scale dependence of predator–prey mass ratio},
	url = {https://books.google.co.nz/books?hl=en&lr=&id=7FyxjRyDevkC&oi=fnd&pg=PA269&ots=s:NA06VvXK&sig=7uLrsxDoj9IiLG6gnc1HGRuJCgQ},
	urldate = {2015-09-14},
	journal = {The Role of Body Size in Multispecies Systems},
	author = {Nakazawa, T. and Ushio, M. and Kondoh, M.},
	year = {2011},
	pages = {269},
	file = {[PDF] from ryukoku.ac.jp:/Users/phil/Dropbox/biblio/zotero/storage/8QCN6NH6/KONDOH - 2011 - Scale dependence of predator–prey mass ratio dete.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/33WZQ5IS/books.html:text/html}
}

@article{stouffer:role:2011,
	title = {The role of body mass in diet contiguity and food-web structure},
	volume = {80},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2656.2011.01812.x/pdf},
	number = {3},
	urldate = {2015-09-14},
	journal = {Journal of Animal Ecology},
	author = {Stouffer, Daniel B. and Rezende, Enrico L. and Amaral, Luís A. Nunes},
	year = {2011},
	pages = {632--639},
	file = {[HTML] from wiley.com:/Users/phil/Dropbox/biblio/zotero/storage/MK8ARCN8/full.html:text/html;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/E5ZK4VQS/pdf.html:text/html}
}

@article{boukal:trait-and:2014,
	title = {Trait-and size-based descriptions of trophic links in freshwater food webs: current status and perspectives},
	volume = {73},
	shorttitle = {Trait-and size-based descriptions of trophic links in freshwater food webs},
	url = {http://www.jlimnol.it/index.php/jlimnol/article/view/jlimnol.2014.826},
	number = {s1},
	urldate = {2015-09-14},
	journal = {Journal of Limnology},
	author = {Boukal, David S.},
	year = {2014},
	file = {[PDF] from jlimnol.it:/Users/phil/Dropbox/biblio/zotero/storage/8DDTGK6B/Boukal - 2014 - Trait-and size-based descriptions of trophic links.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/FTWX47M9/jlimnol.2014.html:text/html}
}

@article{gibert:temperature:2014-1,
	title = {Temperature alters food web body-size structure},
	volume = {10},
	url = {http://rsbl.royalsocietypublishing.org/content/10/8/20140473.short},
	number = {8},
	urldate = {2015-09-14},
	journal = {Biology letters},
	author = {Gibert, Jean P. and DeLong, John P.},
	year = {2014},
	pages = {20140473},
	file = {[HTML] from royalsocietypublishing.org:/Users/phil/Dropbox/biblio/zotero/storage/DKPNXMUZ/20140473.html:text/html}
}

@article{hunt:coupled:2015,
	title = {A coupled stable isotope-size spectrum approach to understanding pelagic food-web dynamics: {A} case study from the southwest sub-tropical {Pacific}},
	volume = {113},
	shorttitle = {A coupled stable isotope-size spectrum approach to understanding pelagic food-web dynamics},
	url = {http://www.sciencedirect.com/science/article/pii/S0967064514003002},
	urldate = {2015-09-14},
	journal = {Deep Sea Research Part II: Topical Studies in Oceanography},
	author = {Hunt, B. P. V. and Allain, V. and Menkes, C. and Lorrain, A. and Graham, B. and Rodier, M. and Pagano, M. and Carlotti, F.},
	year = {2015},
	pages = {208--224},
	file = {[PDF] from isozoo.org:/Users/phil/Dropbox/biblio/zotero/storage/UUN3D9ZG/Hunt et al. - 2015 - A coupled stable isotope-size spectrum approach to.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/JFZNDCEI/S0967064514003002.html:text/html}
}

@article{hartvig:coexistence:2013-1,
	title = {Coexistence of structured populations with size-based prey selection},
	volume = {89},
	url = {http://www.sciencedirect.com/science/article/pii/S0040580913000658},
	urldate = {2015-09-14},
	journal = {Theoretical population biology},
	author = {Hartvig, Martin and Andersen, Ken Haste},
	year = {2013},
	pages = {24--33},
	file = {[PDF] from dtu.dk:/Users/phil/Dropbox/biblio/zotero/storage/9P6CSFBE/Hartvig and Andersen - 2013 - Coexistence of structured populations with size-ba.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/5INVJRTP/S0040580913000658.html:text/html}
}

@article{emmerson:predictive:2011,
	title = {The predictive science of community ecology},
	volume = {80},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2656.2011.01916.x/full},
	number = {6},
	urldate = {2015-09-14},
	journal = {Journal of Animal Ecology},
	author = {Emmerson, Mark C.},
	year = {2011},
	pages = {1111--1114},
	file = {[HTML] from wiley.com:/Users/phil/Dropbox/biblio/zotero/storage/FUJA3C4T/full.html:text/html}
}

@article{reum:implications:2015,
	title = {Implications of scaled δ15N fractionation for community predator–prey body mass ratio estimates in size-structured food webs},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/1365-2656.12405/full},
	urldate = {2015-09-14},
	journal = {Journal of Animal Ecology},
	author = {Reum, Jonathan CP and Jennings, Simon and Hunsicker, Mary E.},
	year = {2015},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/VXZH3D4W/full.html:text/html}
}

@article{boyce:mice:2015-1,
	title = {From mice to elephants: overturning the ‘one size fits all’paradigm in marine plankton food chains},
	volume = {18},
	shorttitle = {From mice to elephants},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/ele.12434/full},
	number = {6},
	urldate = {2015-09-14},
	journal = {Ecology letters},
	author = {Boyce, Daniel G. and Frank, Kenneth T. and Leggett, William C.},
	year = {2015},
	pages = {504--515},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/VAF2HEG5/full.html:text/html}
}

@techreport{hertz:estimation:2014,
	title = {Estimation of predator-prey mass ratios using stable isotopes: sources of errors},
	shorttitle = {Estimation of predator-prey mass ratios using stable isotopes},
	url = {https://peerj.com/preprints/544v1.pdf},
	urldate = {2015-09-14},
	institution = {PeerJ PrePrints},
	author = {Hertz, Eric and Robinson, James and Trudel, Marc and Mazumder, Asit and Baum, Julia K.},
	year = {2014},
	file = {[PDF] from peerj.com:/Users/phil/Dropbox/biblio/zotero/storage/MRXSZDE2/Hertz et al. - 2014 - Estimation of predator-prey mass ratios using stab.pdf:application/pdf}
}

@article{watson:exploring:2014,
	title = {Exploring the role of movement in determining the global distribution of marine biomass using a coupled hydrodynamic–{Size}-based ecosystem model},
	url = {http://www.sciencedirect.com/science/article/pii/S0079661114001463},
	urldate = {2015-09-14},
	journal = {Progress in Oceanography},
	author = {Watson, James R. and Stock, Charles A. and Sarmiento, Jorge L.},
	year = {2014},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/4ZQHQHTE/S0079661114001463.html:text/html}
}

@phdthesis{zhang:mathematical:????,
	title = {Mathematical models of ecology and evolution: {Analysis} of size-structured populations and communities in aquatic ecosystems},
	shorttitle = {Mathematical models of ecology and evolution},
	url = {http://forskningsbasen.deff.dk/Share.external?sp=Scc41bb9f-2aa5-4921-9d9d-8d9e95b3e767&sp=Sdtu},
	urldate = {2015-09-14},
	school = {Technical University of DenmarkDanmarks Tekniske Universitet, Department of Applied Mathematics and Computer ScienceInstitut for Matematik og Computer Science},
	author = {Zhang, Lai},
	file = {[PDF] from dtu.dk:/Users/phil/Dropbox/biblio/zotero/storage/KBNFQJIM/Zhang - Mathematical models of ecology and evolution Anal.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/65UN8BZF/Share.html:text/html}
}

@article{emmerson:predictive:2011-1,
	title = {The predictive science of community ecology},
	volume = {80},
	copyright = {© 2011 The Author. Journal of Animal Ecology © 2011 British Ecological Society},
	issn = {1365-2656},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2656.2011.01916.x/abstract},
	doi = {10.1111/j.1365-2656.2011.01916.x},
	abstract = {[ The sap-feeding plant bug Lopidea media is a specialist on Solidago goldenrod plants. The study by Schmitz and Price compares the interaction strengths of this and several other sap-feeding and leaf- chewing insect herbivores in experimentally assembled food webs in a Connecticut USA meadow. Photo courtesy of Dror Hawlena. ] Schmitz, O.J. \& Price, J.R. (2011) Convergence of tr-ophic interaction strengths in grassland food webs through metabolic scaling of herbivore biomass. Journal of Animal Ecology. 80, 1330–1336. Body mass measures provide a tantalizing tool for explaining both variation in emergent community-level patterns and as a mechanistic basis for fundamental processes such as metabolism, consumption and competition. The unification of body mass, abundance and food web (ecological network) structure in community ecology is an effective way to explore future scenarios of environmental change. However, constraints over the availability of data against which to validate model predictions limit the application of size-based approaches. Here, I explore issues over the use of body size for predicting interaction strengths and hence the dynamics of natural ecosystems. The advantages, disadvantages, opportunities and limitations of such approaches are explored.},
	language = {en},
	number = {6},
	urldate = {2015-09-14},
	journal = {Journal of Animal Ecology},
	author = {Emmerson, Mark C.},
	month = nov,
	year = {2011},
	pages = {1111--1114},
	file = {Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/4QWKT8BG/Emmerson - 2011 - The predictive science of community ecology.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/74ZEBHWI/full.html:text/html}
}

@incollection{hildrew:body:2007,
	address = {Cambridge},
	title = {Body size and predatory interactions in freshwaters: scaling from individuals to communities},
	isbn = {978-0-511-61122-3 978-0-521-86172-4 978-0-521-67967-1},
	shorttitle = {Body size and predatory interactions in freshwaters},
	url = {http://ebooks.cambridge.org/ref/id/CBO9780511611223A014},
	urldate = {2015-09-14},
	booktitle = {Body {Size}: {The} {Structure} and {Function} of {Aquatic} {Ecosystems}},
	publisher = {Cambridge University Press},
	author = {Woodward, Guy and Warren, Philip},
	editor = {Hildrew, Alan G. and Raffaelli, David G. and Edmonds-Brown, Ronni},
	year = {2007},
	pages = {98--117},
	file = {Woodward & Warren 2007 BES.pdf:/Users/phil/Dropbox/biblio/zotero/storage/7WTQ7H84/Woodward & Warren 2007 BES.pdf:application/pdf}
}

@article{brose:climate:2012,
	title = {Climate change in size-structured ecosystems},
	volume = {367},
	url = {http://rstb.royalsocietypublishing.org/content/367/1605/2903.short},
	number = {1605},
	urldate = {2015-09-17},
	journal = {Philosophical Transactions of the Royal Society B: Biological Sciences},
	author = {Brose, Ulrich and Dunne, Jennifer A. and Montoya, Jose M. and Petchey, Owen L. and Schneider, Florian D. and Jacob, Ute},
	year = {2012},
	pages = {2903--2912},
	file = {[HTML] from royalsocietypublishing.org:/Users/phil/Dropbox/biblio/zotero/storage/9JAWW2MU/2903.html:text/html}
}

@article{gill:dynamics:2003,
	title = {The dynamics of prey choice in fish: the importance of prey size and satiation},
	volume = {63},
	issn = {1095-8649},
	shorttitle = {The dynamics of prey choice in fish},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1095-8649.2003.00214.x/abstract},
	doi = {10.1111/j.1095-8649.2003.00214.x},
	abstract = {Over a number of decades the process of prey choice has been investigated using fishes as model predators. Using fishes for the model has allowed the proximate factors that determine how a mobile predator finds and chooses to eat the prey encountered within a variable 3-D environment to be estimated. During prey choice a number of constraints exist, in particular most fish predators will eat their prey whole thus their jaws and gut create functional limitations once a prey has been attacked. By considering the relationship between the size of the prey and the predator's feeding apparatus and feeding motivation this study explores the link between mechanistic studies and theoretical, optimal foraging based predictions. How the prediction of prey choices made by the fish following prey encounter can be reconciled with what is likely to be found in the fish's stomach is discussed. This study uses a progression of empirical examples to illustrate how the limits of functional constraints and prey choice at different stages of motivation to feed can be taken into account to improve predictions of predator prey choice.},
	language = {en},
	urldate = {2015-09-20},
	journal = {Journal of Fish Biology},
	author = {Gill, A. B.},
	month = dec,
	year = {2003},
	keywords = {dynamic foraging, feeding motivation, foraging theory, prey choice, stomach fullness},
	pages = {105--116},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/97VNGXQS/abstract.html:text/html}
}

@article{bax:significance:1998,
	title = {The significance and prediction of predation in marine fisheries},
	volume = {55},
	issn = {1054-3139, 1095-9289},
	url = {http://icesjms.oxfordjournals.org/content/55/6/997},
	doi = {10.1006/jmsc.1998.0350},
	abstract = {Predation is a pervasive but ephemeral feature of marine fisheries. Losses to predation can exceed losses to fisheries, yet is is often assumed fishing mortality alone is responsible for variation in fish survival. While it may be sufficient to forget predation in short-term prediction and management, this will not further longer-term prediction and management. The predation experienced by a population is influenced by environmental and biological factors that vary spatially, seasonally, annually, and with the abundance of itself, other prey species, and the predator species. Predation can directly regulate prey numbers and indirectly regulate their survival via habitat availability, individual growth, and trophic structure. Despite predation's pervasity, its complexity and variability complicate its prediction. Models of predation have shown assumptions made in single-species models to be incorrect, but numerical prediction may be reliable for only the simplest symmetrical predator–prey interactions, where ontogenetic changes in predator diet and prey vulnerability have been accounted for. Knowledge of the effects of predation in marine fisheries will be furthered by an ongoing commitment to test and explore the properties of managed fisheries, while preserving, as necessary, the productivity and buffering capacity of the natural system.},
	language = {en},
	number = {6},
	urldate = {2015-09-20},
	journal = {ICES Journal of Marine Science: Journal du Conseil},
	author = {Bax, N. J.},
	month = dec,
	year = {1998},
	keywords = {fisheries management, multispecies models, Predation, prediction},
	pages = {997--1030},
	file = {Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/68HN3X4N/Bax - 1998 - The significance and prediction of predation in ma.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/BM43VU69/997.html:text/html}
}

@article{persson:size-specific:1996,
	title = {Size-{Specific} {Interactions} in {Lake} {Systems}: {Predator} {Gape} {Limitation} and {Prey} {Growth} {Rate} and {Mortality}},
	volume = {77},
	copyright = {Copyright © 1996 Ecological Society of America},
	issn = {0012-9658},
	shorttitle = {Size-{Specific} {Interactions} in {Lake} {Systems}},
	url = {http://www.jstor.org/stable/2265510},
	doi = {10.2307/2265510},
	abstract = {To study the effects of different predators on the behavior and dynamics of their prey, we compared the performance of perch (Perca fluviatilis) and the abundance of their prey resource in four lakes with two different types of piscivory. In two of the lakes, perch were the only fish species present and piscivory was restricted to cannibalism. In the other two lakes, perch co-occurred with piscivorous pike (Esox lucius). Pike grow to larger sizes and can capture larger prey than piscivorous perch. Therefore, perch reach a size refuge earlier in the lakes without pike. Perch in the lakes lacking pike used both the epilimnion and hypolimnion habitats of the lakes, and a high proportion of the perch occurred below the thermocline. In contrast, perch in the lakes with pike were mainly captured along the littoral zone and were never captured below the thermocline. This difference in habitat use was reflected in different diets of perch in the different lakes. Perch in the lakes with pike were also less abundant than those in the lakes lacking pike and the growth rates of individual perch and the densities of predator-sensitive prey (pelagic and littoral) were higher, indicating that the presence of pike resulted in decreased intraspecific competition in perch. Evidence for a behavioral response to predation risk was found in 1 + (1 yr old) perch, which was suggested to be due to predation risk from both larger perch and pike. It is hypothesized that the use of the cold-water hypolimnion habitat by perch in the lakes lacking pike was a response of perch to reduce metabolic demands under conditions of severe resource limitation. Differences in gape limitation between predators species are suggested to have major effects on size-dependent mortalities and growth rates in prey and thereby on overall community dynamics. Evidence for this latter effect was observed in differences in zooplankton size structure between the lakes with and without pike.},
	number = {3},
	urldate = {2015-09-20},
	journal = {Ecology},
	author = {Persson, Lennart and Andersson, Jens and Wahlström, Eva and Eklöv, Peter},
	month = apr,
	year = {1996},
	pages = {900--911}
}

@article{sogard:size-selective:1997,
	title = {Size-{Selective} {Mortality} in the {Juvenile} {Stage} of {Teleost} {Fishes}: {A} {Review}},
	volume = {60},
	shorttitle = {Size-{Selective} {Mortality} in the {Juvenile} {Stage} of {Teleost} {Fishes}},
	abstract = {Individual variability in body size provides a template for selective mortality processes during early life history stages of teleost fishes. This size variability has generated the logically intuitive hypothesis that larger or faster growing members of a cohort gain a survival advantage over smaller conspecifics via enhanced resistance to starvation, decreased vulnerability to predators, and better tolerance of environmental extremes. This review evaluates field and laboratory studies that have examined size-based differences in survival, with emphasis on the juvenile stage of teleost fishes. The results in general support the "bigger is better" hypothesis, although a number of examples indicate non-selective mortality with no obvious size advantages. The reverse pattern, with enhanced survival of smaller individuals, is rare with the notable exception of bird predation. Major size-selective processes during the juvenile stage include overwinter mortality for temperate species, associated with either starvation or intolerance of physical extremes by smaller members of the young-of-the-year cohort, and predation, with smaller fish more susceptible to successful capture by predators. Most studies examining these processes have used indirect methods to evaluate size-selective mortality, with interpretation of results dependent on several critical assumptions. For methods that track size distributions over time, unbiased samples collected from the same population are critical, and changes in size distributions associated with mortality must be distinguished from changes due to individual growth. The latter requirement can be met with the direct, "characteristics of survivors" method, but few studies have used this approach. Experimental methods isolating specific mechanisms of size-specific mortality must appropriately represent the natural context of environmental factors. Specific predator/prey combinations, for example, can elucidate size-based prey preferences but may be irrelevant compared to the natural, multi-species predator field. The composition of the predator field and its correspondence to size-spectrum theory is crucial to the probability of size-selective predation as a cohort progresses through the juvenile stage. Distinction of selection on body size vs. selection on growth rate has received little attention. However, a number of physiological constraints and ecological trade-offs can place restrictions on growth rates and apparently override the advantages of large body size. Identifying the major sources of mortality and how they operate in the juvenile stage has valuable applications in understanding population dynamics and recruitment variability.},
	number = {3},
	journal = {Bulletin of Marine Science},
	author = {Sogard, Susan M.},
	month = jul,
	year = {1997},
	pages = {1129--1157}
}

@article{turesson:satiation:2006,
	title = {Satiation effects in piscivore prey size selection},
	volume = {15},
	issn = {1600-0633},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1600-0633.2005.00124.x/abstract},
	doi = {10.1111/j.1600-0633.2005.00124.x},
	abstract = {Abstract –  We present a functional response model that primarily evaluates effects of satiation in piscivore prey-size selection. The model also includes other passive processes, such as prey-size-dependent encounter rate and prey-size-dependent capture success, where capture success decreases and encounter rate increases with prey size. The model generates a wide variety of outcomes, where small, intermediate or large prey is positively selected for. These very different selectivity patterns are generated without any active prey choice included in the model. The results stress the importance of controlling for satiation and other passive processes in empirical studies on prey-size selection, especially if the aim is to test active prey choice in piscivores.},
	language = {en},
	number = {1},
	urldate = {2015-09-20},
	journal = {Ecology of Freshwater Fish},
	author = {Turesson, H. and Brönmark, C. and Wolf, A.},
	month = mar,
	year = {2006},
	keywords = {gut, Predation, prey choice, Sander, selectivity, stomach},
	pages = {78--85},
	file = {Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/9HIHA64N/Turesson et al. - 2006 - Satiation effects in piscivore prey size selection.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/TWHJBDVA/full.html:text/html}
}

@article{p.:anders:predator:2001,
	title = {Predator behaviour and prey density: evaluating density-dependent intraspecific interactions on predator functional responses},
	volume = {70},
	issn = {1365-2656},
	shorttitle = {Predator behaviour and prey density},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2656.2001.00472.x/abstract},
	doi = {10.1111/j.1365-2656.2001.00472.x},
	abstract = {* 1In models of size-structured predator–prey systems, the effects are evaluated of gape-size limited predation on prey population growth and density when predators are non-interacting, cannibalistic, interfering, and cannibalistic and interfering.
* 2Predation from non-interacting predators markedly reduces prey density, compared with prey densities in the absence of predation. When density-dependent cannibalism between predators is introduced, predator density and therefore total functional response decrease, resulting in a decrease in predation pressure and higher prey densities.
* 3Size- and density-dependent interference between predators substantially decreases functional responses in the predators, and the prey population is thus allowed to grow more dense. Allowing for cannibalism between interfering predators also decreases predator density, but here the decreased number of predators does not have the releasing effect seen in solely cannibalistic predators. The interference between predators decreases with predator density, and per capita functional responses increase and compensate for the decrease in predator density.
* 4These theoretical results are compared with results from natural systems with pikeperch and northern pike. Both species are cannibalistic, and pike are also kleptoparasitic, mirroring the models. Results from introductions of the different piscivores into natural systems corroborate the outcome of the models, since introduction or increased densities of pikeperch have shown to have severe and long-lasting effects on prey, while pike have only initial, decreasing over time effects on prey stock. Thus, predator behaviour may seriously affect predator impact on prey, and size- and density-dependent interactions between predators may be a major key to the understanding of predator–prey dynamics and community composition in lakes.},
	language = {en},
	number = {1},
	urldate = {2015-09-20},
	journal = {Journal of Animal Ecology},
	author = {P. Anders, Nilsson},
	month = jan,
	year = {2001},
	keywords = {Cannibalism, kleptoparasitism, predator–prey interactions, size-structured populations, trophic effects},
	pages = {14--19},
	file = {Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/7A7SP48F/P. Anders - 2001 - Predator behaviour and prey density evaluating de.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/UEFMMSD3/full.html:text/html}
}

@article{juanes:predatory:2001,
	title = {Predatory behaviour and selectivity of a primary piscivore: comparison of fish and non-fish prey},
	volume = {217},
	shorttitle = {Predatory behaviour and selectivity of a primary piscivore},
	url = {http://people.uncw.edu/scharff/publications/MEPS%202001.pdf},
	urldate = {2015-09-20},
	journal = {Marine Ecology Progress Series},
	author = {Juanes, Francis and Buckel, Jeffrey A. and Scharf, Frederick S.},
	year = {2001},
	pages = {157--165},
	file = {MEPS 2001.pdf:/Users/phil/Dropbox/biblio/zotero/storage/T4W83GMT/MEPS 2001.pdf:application/pdf}
}

@article{plummer:jags:2011,
	title = {{JAGS} {Version} 3.1. 0 user manual},
	url = {http://mirrors.teentelecom.net/FreeBSD/ports/distfiles/mcmc-jags/jags_user_manual.pdf},
	urldate = {2014-01-05},
	journal = {International Agency for Research on Cancer},
	author = {Plummer, Martyn},
	year = {2011},
	file = {jags_user_manual.pdf:/Users/phil/Dropbox/biblio/zotero/storage/AHD7KW2D/jags_user_manual.pdf:application/pdf}
}

@article{johnson:effect:2012,
	title = {Effect of prey abundance and size on the distribution of demersal fishes},
	volume = {69},
	issn = {0706-652X},
	url = {http://www.nrcresearchpress.com/doi/abs/10.1139/f2011-138},
	doi = {10.1139/f2011-138},
	abstract = {Many demersal fish species rely on benthic prey as food sources for part of, or in some cases, all of their life history. We investigated the relationships between prey and predator abundance and prey size and predator mouth gape size for nine demersal fish species. Of the species analysed, four showed a significant positive increase in abundance with increasing prey abundance. Prey size is thought to be an important parameter for demersal fish that are limited in their feeding potential by their mouth gape size, as it influences consumption rate and energy expenditure while foraging. The relationship between prey size and mouth gape was investigated using both stomach content data and prey availability data. Stomach content analysis revealed positive relationships between maximum prey size and predator mouth gape size for six of the species. Indications of prey size selectivity were only seen in the environment for European hake (Merluccius merluccius), highlighting the potential importance of prey size ..., Plusieurs poissons démersaux comptent sur les proies benthiques comme sources de nourriture durant une partie et, en certains cas, l’ensemble de leur cycle biologique. Nous étudions la relation entre l’abondance des proies et des prédateurs, ainsi qu’entre la taille des proies et l’ouverture de la bouche des prédateurs, chez neuf espèces de poissons démersaux. Parmi les espèces analysées, quatre montrent une augmentation positive d’abondance en fonction de l’augmentation de l’abondance des proies. On croit que la taille des proies est une variable importante chez les poissons démersaux dont le potentiel alimentaire est limité par la taille de l’ouverture de leur bouche, puisqu’elle va influencer le taux de consommation et la dépense d’énergie durant la recherche de nourriture. Nous examinons la relation entre la taille des proies et l’ouverture de la bouche en utilisant à la fois des données sur les contenus stomacaux et des données de disponibilité des proies. L’analyse des contenus stomacaux montre une ...},
	number = {1},
	urldate = {2015-09-20},
	journal = {Canadian Journal of Fisheries and Aquatic Sciences},
	author = {Johnson, Andrew F. and Valls, Maria and Moranta, Joan and Jenkins, Stuart R. and Hiddink, Jan G. and Hinz, Hilmar},
	month = jan,
	year = {2012},
	pages = {191--200},
	file = {NRC Research Press Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/68ZUWKX6/f2011-138.html:text/html}
}

@article{kolding:maximizing:2015,
	title = {Maximizing fisheries yields while maintaining community structure},
	issn = {0706-652X},
	url = {http://www.nrcresearchpress.com/doi/abs/10.1139/cjfas-2015-0098},
	doi = {10.1139/cjfas-2015-0098},
	abstract = {Under the Ecosystem Approach to Fisheries an optimal fishing pattern is one that gives the highest possible yield while causing the least structural impact on the community. Unregulated, open access African inland fisheries have been observed to sustain high catches by harvesting a broad spectrum of species and sizes, often in conflict with current management regulations in terms of mesh and gear regulations. Using a size and trait-based model we explore whether such exploitation patterns are commensurable with the Ecosystem Approach to Fisheries, by comparing the impacts on size spectrum slope and yield with the different size limit regimes employed in the Zambian and Zimbabwean side of man-made Lake Kariba. Long-term multispecies data under fished and unfished conditions are used to compare and validate the model results. Both model and observations show that the highest yields and low structural impact on the ecosystem are obtained by targeting small individuals in the community. These results call for...},
	urldate = {2015-10-20},
	journal = {Canadian Journal of Fisheries and Aquatic Sciences},
	author = {Kolding, Jeppe and Jacobsen, Nis S and Andersen, Ken H. and van Zwieten, Paul A.M.},
	month = sep,
	year = {2015},
	file = {NRC Research Press PDF fulltext:/Users/phil/Dropbox/biblio/zotero/storage/F6T2533R/Kolding et al. - 2015 - Maximizing fisheries yields while maintaining comm.pdf:application/pdf;NRC Research Press Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/UHTEMH6P/cjfas-2015-0098.html:text/html}
}

@article{mangel:reproductive:2010,
	title = {Reproductive ecology and scientific inference of steepness: a fundamental metric of population dynamics and strategic fisheries management},
	volume = {11},
	issn = {14672960, 14672979},
	shorttitle = {Reproductive ecology and scientific inference of steepness},
	url = {http://doi.wiley.com/10.1111/j.1467-2979.2009.00345.x},
	doi = {10.1111/j.1467-2979.2009.00345.x},
	number = {1},
	urldate = {2014-01-15},
	journal = {Fish and Fisheries},
	author = {Mangel, Marc and Brodziak, Jon and DiNardo, Gerard},
	month = mar,
	year = {2010},
	pages = {89--104},
	file = {Mangel et al. - 2010 - Reproductive ecology and scientific inference of s.pdf:/Users/phil/Dropbox/biblio/zotero/storage/C2CGBR2Z/Mangel et al. - 2010 - Reproductive ecology and scientific inference of s.pdf:application/pdf}
}

@article{lee:can:2012,
	title = {Can steepness of the stock–recruitment relationship be estimated in fishery stock assessment models?},
	volume = {125},
	url = {http://www.sciencedirect.com/science/article/pii/S0165783612001099},
	urldate = {2014-06-30},
	journal = {Fisheries Research},
	author = {Lee, Hui-Hua and Maunder, Mark N. and Piner, Kevin R. and Methot, Richard D.},
	year = {2012},
	pages = {254--261}
}

@article{he:prior:2006,
	title = {A prior for steepness in stock-recruitment relationships, based on an evolutionary persistence principle},
	volume = {104},
	url = {http://aquaticcommons.org/8979/},
	number = {3},
	urldate = {2014-06-18},
	journal = {Fishery Bulletin},
	author = {He, Xi and Mangel, Marc and MacCall, Alec},
	year = {2006},
	pages = {428--433},
	file = {[PDF] from aquaticcommons.org:/Users/phil/Dropbox/biblio/zotero/storage/NKF6WDUE/He et al. - 2006 - A prior for steepness in stock-recruitment relatio.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/MFZEN283/8979.html:text/html}
}

@article{denney:lifehistory:2002,
	title = {Life–history correlates of maximum population growth rates in marine fishes},
	volume = {269},
	url = {http://rspb.royalsocietypublishing.org/content/269/1506/2229.short},
	number = {1506},
	urldate = {2014-06-30},
	journal = {Proceedings of the Royal Society of London. Series B: Biological Sciences},
	author = {Denney, Nicola H. and Jennings, Simon and Reynolds, John D.},
	year = {2002},
	pages = {2229--2237}
}

@article{michielsens:bayesian:2004,
	title = {A {Bayesian} hierarchical analysis of stock recruit data: {Quantifying} structural and parameter uncertainties},
	volume = {61},
	shorttitle = {A {Bayesian} hierarchical analysis of stock recruit data},
	url = {http://www.nrcresearchpress.com/doi/abs/10.1139/f04-048},
	number = {6},
	urldate = {2014-06-30},
	journal = {Canadian Journal of Fisheries and Aquatic Sciences},
	author = {Michielsens, Catherine GJ and McAllister, Murdoch K.},
	year = {2004},
	pages = {1032--1047}
}

@article{myers:stock:2001,
	title = {Stock and recruitment: generalizations about maximum reproductive rate, density dependence, and variability using meta-analytic approaches},
	volume = {58},
	shorttitle = {Stock and recruitment},
	url = {http://icesjms.oxfordjournals.org/content/58/5/937.short},
	number = {5},
	urldate = {2014-06-30},
	journal = {ICES Journal of Marine Science: Journal du Conseil},
	author = {Myers, Ransom A.},
	year = {2001},
	pages = {937--951}
}

@article{denney:life-history:????,
	title = {Life-history correlates of maximum population growth rates in marine fishes},
	url = {http://johnreynolds.org/wp-content/uploads/2012/07/denney-et-al-prs-021.pdf},
	urldate = {2014-06-30},
	author = {Denney, Nicola H. and Jennings, Simon and Reynolds, John D.}
}

@article{osenberg:resolving:1999,
	title = {Resolving ecological questions through meta-analysis: goals, metrics, and models},
	volume = {80},
	shorttitle = {Resolving ecological questions through meta-analysis},
	url = {http://www.esajournals.org/doi/abs/10.1890/0012-9658(1999)080%5B1105:REQTMA%5D2.0.CO;2},
	number = {4},
	urldate = {2014-06-30},
	journal = {Ecology},
	author = {Osenberg, Craig W. and Sarnelle, Orlando and Cooper, Scott D. and Holt, Robert D.},
	year = {1999},
	pages = {1105--1117}
}

@article{quinn:hierarchical:2010,
	title = {Hierarchical {Bayesian} estimation of recruitment parameters and reference points for {Pacific} rockfishes ({Sebastes} spp.) under alternative assumptions about the stock-recruit function},
	volume = {67},
	url = {http://www.nrcresearchpress.com/doi/abs/10.1139/F10-077},
	number = {10},
	urldate = {2014-06-30},
	journal = {Canadian Journal of Fisheries and Aquatic Sciences},
	author = {Quinn, Terrance and Forrest, Robyn E. and McAllister, Murdoch K. and Dorn, Martin W. and Martell, Steven JD and Stanley, Richard D.},
	year = {2010},
	pages = {1611--1634}
}

@article{myers:maximum:1999,
	title = {Maximum reproductive rate of fish at low population sizes},
	volume = {56},
	url = {http://www.nrcresearchpress.com/doi/abs/10.1139/f99-201},
	number = {12},
	urldate = {2014-06-30},
	journal = {Canadian Journal of Fisheries and Aquatic Sciences},
	author = {Myers, Ransom A. and Bowen, Keith G. and Barrowman, Nicholas J.},
	year = {1999},
	pages = {2404--2419},
	file = {Myers et al. - 1999 - Maximum reproductive rate of fish at low populatio.pdf:/Users/phil/Dropbox/biblio/zotero/storage/ISJZ6P37/Myers et al. - 1999 - Maximum reproductive rate of fish at low populatio.pdf:application/pdf}
}

@article{sugeno:semiparametric:2013,
	title = {A semiparametric {Bayesian} approach to estimating maximum reproductive rates at low population sizes},
	volume = {23},
	issn = {1051-0761},
	url = {http://www.esajournals.org/doi/abs/10.1890/12-0453.1},
	doi = {10.1890/12-0453.1},
	abstract = {The maximum annual reproductive rate (i.e., the slope at the origin in a stock–recruitment relationship) is one of the most important biological reference points in fisheries; it sets the upper limit to sustainable fishing mortality. Estimating the maximum reproductive rate by fitting parametric models to stock–recruitment data may not be a robust approach because two statistically indistinguishable models can generate radically different estimates. To mitigate this issue, we developed a flexible, semiparametric Bayesian approach based on a conditional Gaussian process prior specifically designed to estimate the maximum annual reproductive rate, and applied it to analyze simulated stock–recruitment data sets. Compared with results based on other Gaussian process priors, we found that the conditional Gaussian process prior provided superior results: the accuracy and precision of estimates were enhanced without increasing model complexity. Moreover, compared with parametric alternatives, performance of the conditional Gaussian process prior was comparable to that of the data-generating model and always better than the wrong model.},
	number = {4},
	urldate = {2014-12-30},
	journal = {Ecological Applications},
	author = {Sugeno, Masatoshi and Munch, Stephan B.},
	month = jun,
	year = {2013},
	keywords = {Allee effects, depensation, Gaussian process, maximum annual reproductive rate, semiparametric Bayesian modeling, slope at the origin, stock–recruitment relationship},
	pages = {699--709},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/8DNA63CJ/12-0453.html:text/html}
}

@article{kenchington:natural:2014,
	title = {Natural mortality estimators for information-limited fisheries},
	volume = {15},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/faf.12027/full},
	number = {4},
	urldate = {2015-04-18},
	journal = {Fish and Fisheries},
	author = {Kenchington, Trevor J.},
	year = {2014},
	pages = {533--562},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/TFS5IU4V/full.html:text/html}
}

@article{then:evaluating:2015,
	title = {Evaluating the predictive performance of empirical estimators of natural mortality rate using information on over 200 fish species},
	volume = {72},
	issn = {1054-3139, 1095-9289},
	url = {http://icesjms.oxfordjournals.org/content/72/1/82},
	doi = {10.1093/icesjms/fsu136},
	abstract = {Many methods have been developed in the last 70 years to predict the natural mortality rate, M, of a stock based on empirical evidence from comparative life history studies. These indirect or empirical methods are used in most stock assessments to (i) obtain estimates of M in the absence of direct information, (ii) check on the reasonableness of a direct estimate of M, (iii) examine the range of plausible M estimates for the stock under consideration, and (iv) define prior distributions for Bayesian analyses. The two most cited empirical methods have appeared in the literature over 2500 times to date. Despite the importance of these methods, there is no consensus in the literature on how well these methods work in terms of prediction error or how their performance may be ranked. We evaluate estimators based on various combinations of maximum age (tmax), growth parameters, and water temperature by seeing how well they reproduce {\textgreater}200 independent, direct estimates of M. We use tenfold cross-validation to estimate the prediction error of the estimators and to rank their performance. With updated and carefully reviewed data, we conclude that a tmax-based estimator performs the best among all estimators evaluated. The tmax-based estimators in turn perform better than the Alverson–Carney method based on tmax and the von Bertalanffy K coefficient, Pauly's method based on growth parameters and water temperature and methods based just on K. It is possible to combine two independent methods by computing a weighted mean but the improvement over the tmax-based methods is slight. Based on cross-validation prediction error, model residual patterns, model parsimony, and biological considerations, we recommend the use of a tmax-based estimator (M=4.899t−0.916max{\textless}mml:math{\textgreater}{\textless}mml:mi{\textgreater}M{\textless}/mml:mi{\textgreater}{\textless}mml:mo{\textgreater}={\textless}/mml:mo{\textgreater}{\textless}mml:mn{\textgreater}4.899{\textless}/mml:mn{\textgreater}{\textless}mml:msubsup{\textgreater}{\textless}mml:mi{\textgreater}t{\textless}/mml:mi{\textgreater}{\textless}mml:mrow{\textgreater}{\textless}mml:mo movablelimits="true"{\textgreater}max{\textless}/mml:mo{\textgreater}{\textless}/mml:mrow{\textgreater}{\textless}mml:mrow{\textgreater}{\textless}mml:mo{\textgreater}−{\textless}/mml:mo{\textgreater}{\textless}mml:mn{\textgreater}0.916{\textless}/mml:mn{\textgreater}{\textless}/mml:mrow{\textgreater}{\textless}/mml:msubsup{\textgreater}{\textless}/mml:math{\textgreater}, prediction error = 0.32) when possible and a growth-based method (M=4.118K0.73L−0.33∞{\textless}mml:math{\textgreater}{\textless}mml:mi{\textgreater}M{\textless}/mml:mi{\textgreater}{\textless}mml:mo{\textgreater}={\textless}/mml:mo{\textgreater}{\textless}mml:mn{\textgreater}4.118{\textless}/mml:mn{\textgreater}{\textless}mml:mrow{\textgreater}{\textless}mml:msup{\textgreater}{\textless}mml:mi{\textgreater}K{\textless}/mml:mi{\textgreater}{\textless}mml:mrow{\textgreater}{\textless}mml:mn{\textgreater}0.73{\textless}/mml:mn{\textgreater}{\textless}/mml:mrow{\textgreater}{\textless}/mml:msup{\textgreater}{\textless}/mml:mrow{\textgreater}{\textless}mml:msubsup{\textgreater}{\textless}mml:mi{\textgreater}L{\textless}/mml:mi{\textgreater}{\textless}mml:mi mathvariant="normal"{\textgreater}∞{\textless}/mml:mi{\textgreater}{\textless}mml:mrow{\textgreater}{\textless}mml:mo{\textgreater}−{\textless}/mml:mo{\textgreater}{\textless}mml:mn{\textgreater}0.33{\textless}/mml:mn{\textgreater}{\textless}/mml:mrow{\textgreater}{\textless}/mml:msubsup{\textgreater}{\textless}/mml:math{\textgreater} , prediction error = 0.6) otherwise.},
	language = {en},
	number = {1},
	urldate = {2015-04-18},
	journal = {ICES Journal of Marine Science: Journal du Conseil},
	author = {Then, Amy Y. and Hoenig, John M. and Hall, Norman G. and Hewitt, David A.},
	month = jan,
	year = {2015},
	keywords = {Alverson and Carney, data limited, data poor situations, fish mortality, Hoenig, indirect estimators of M, Jensen, natural mortality, Pauly, prior distribution},
	pages = {82--92},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/HX4EPSPU/82.html:text/html}
}

@article{blanchard:potential:2012,
	title = {Potential consequences of climate change for primary production and fish production in large marine ecosystems},
	volume = {367},
	issn = {0962-8436, 1471-2970},
	url = {http://rstb.royalsocietypublishing.org/content/367/1605/2979},
	doi = {10.1098/rstb.2012.0231},
	abstract = {Existing methods to predict the effects of climate change on the biomass and production of marine communities are predicated on modelling the interactions and dynamics of individual species, a very challenging approach when interactions and distributions are changing and little is known about the ecological mechanisms driving the responses of many species. An informative parallel approach is to develop size-based methods. These capture the properties of food webs that describe energy flux and production at a particular size, independent of species' ecology. We couple a physical–biogeochemical model with a dynamic, size-based food web model to predict the future effects of climate change on fish biomass and production in 11 large regional shelf seas, with and without fishing effects. Changes in potential fish production are shown to most strongly mirror changes in phytoplankton production. We project declines of 30–60\% in potential fish production across some important areas of tropical shelf and upwelling seas, most notably in the eastern Indo-Pacific, the northern Humboldt and the North Canary Current. Conversely, in some areas of the high latitude shelf seas, the production of pelagic predators was projected to increase by 28–89\%.},
	language = {en},
	number = {1605},
	urldate = {2014-02-19},
	journal = {Philosophical Transactions of the Royal Society B: Biological Sciences},
	author = {Blanchard, Julia L. and Jennings, Simon and Holmes, Robert and Harle, James and Merino, Gorka and Allen, J. Icarus and Holt, Jason and Dulvy, Nicholas K. and Barange, Manuel},
	month = nov,
	year = {2012},
	pmid = {23007086},
	keywords = {benthic–pelagic coupling, fisheries ecology, global environmental change, marine communities, marine macroecology, size spectrum},
	pages = {2979--2989},
	file = {Blanchard et al. - 2012 - Potential consequences of climate change for prima.pdf:/Users/phil/Dropbox/biblio/zotero/storage/J9MSTZXC/Blanchard et al. - 2012 - Potential consequences of climate change for prima.pdf:application/pdf;Data Supplement:/Users/phil/Dropbox/biblio/zotero/storage/B9ES3284/rstb.2012.0231.DC1.html:text/html;rstb20120231supp1.docx:/Users/phil/Dropbox/biblio/zotero/storage/IXWI8W72/rstb20120231supp1.docx:application/vnd.openxmlformats-officedocument.wordprocessingml.document;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/EXDAWPGR/2979.html:text/html}
}

@article{blanchard:evaluating:2014,
	title = {Evaluating targets and trade-offs among fisheries and conservation objectives using a multispecies size spectrum model},
	journal = {Journal of Applied Ecology},
	author = {Blanchard, J. L. and Andersen, Ken Haste and Scott, F. and Hinzen, N. T. and Piet, G. and Jennings, S.},
	year = {2014},
	keywords = {community ecology, ecosystem-based management, fisheries ecology, maximum sustainable yield, trophic interactions},
	file = {Blanchard et al. - 2014 - Evaluating targets and trade-offs among fisheries .docx:/Users/phil/Dropbox/biblio/zotero/storage/WRVR2XGR/Blanchard et al. - 2014 - Evaluating targets and trade-offs among fisheries .docx:application/vnd.openxmlformats-officedocument.wordprocessingml.document;Blanchard et al (2014) Evaluating targets and trade-offs among fisheries ....pdf:/Users/phil/Dropbox/biblio/zotero/storage/6QVMNKQ4/Blanchard et al (2014) Evaluating targets and trade-offs among fisheries ....pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/RRVWN7VQ/abstract.html:text/html}
}

@article{barange:impacts:2014,
	title = {Impacts of climate change on marine ecosystem production in societies dependent on fisheries},
	volume = {4},
	copyright = {© 2014 Nature Publishing Group},
	issn = {1758-678X},
	url = {http://www.nature.com/nclimate/journal/v4/n3/full/nclimate2119.html},
	doi = {10.1038/nclimate2119},
	abstract = {Growing human populations and changing dietary preferences are increasing global demands for fish, adding pressure to concerns over fisheries sustainability. Here we develop and link models of physical, biological and human responses to climate change in 67 marine national exclusive economic zones, which yield approximately 60\% of global fish catches, to project climate change yield impacts in countries with different dependencies on marine fisheries. Predicted changes in fish production indicate increased productivity at high latitudes and decreased productivity at low/mid latitudes, with considerable regional variations. With few exceptions, increases and decreases in fish production potential by 2050 are estimated to be {\textless}10\% (mean +3.4\%) from present yields. Among the nations showing a high dependency on fisheries, climate change is predicted to increase productive potential in West Africa and decrease it in South and Southeast Asia. Despite projected human population increases and assuming that per capita fish consumption rates will be maintained, ongoing technological development in the aquaculture industry suggests that projected global fish demands in 2050 could be met, thus challenging existing predictions of inevitable shortfalls in fish supply by the mid-twenty-first century. This conclusion, however, is contingent on successful implementation of strategies for sustainable harvesting and effective distribution of wild fish products from nations and regions with a surplus to those with a deficit. Changes in management effectiveness and trade practices will remain the main influence on realized gains or losses in global fish production.},
	language = {en},
	number = {3},
	urldate = {2014-03-31},
	journal = {Nature Climate Change},
	author = {Barange, M. and Merino, G. and Blanchard, J. L. and Scholtens, J. and Harle, J. and Allison, E. H. and Allen, J. I. and Holt, J. and Jennings, S.},
	month = mar,
	year = {2014},
	pages = {211--216},
	file = {Barange et al. - 2014 - Impacts of climate change on marine ecosystem prod.pdf:/Users/phil/Dropbox/biblio/zotero/storage/8H5U2HK9/Barange et al. - 2014 - Impacts of climate change on marine ecosystem prod.pdf:application/pdf}
}

@article{rijnsdorp:resolving:2009,
	title = {Resolving the effect of climate change on fish populations},
	volume = {66},
	url = {http://icesjms.oxfordjournals.org/content/66/7/1570.short},
	number = {7},
	urldate = {2014-02-18},
	journal = {ICES Journal of Marine Science: Journal du Conseil},
	author = {Rijnsdorp, Adriaan D. and Peck, Myron A. and Engelhard, Georg H. and Möllmann, Christian and Pinnegar, John K.},
	year = {2009},
	pages = {1570--1583},
	file = {[HTML] from oxfordjournals.org:/Users/phil/Dropbox/biblio/zotero/storage/9BJ5IDA8/1570.html:text/html;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/F3UXNKP5/1570.html:text/html}
}

@article{harley:impacts:2006,
	title = {The impacts of climate change in coastal marine systems},
	volume = {9},
	issn = {1461-0248},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1461-0248.2005.00871.x/abstract},
	doi = {10.1111/j.1461-0248.2005.00871.x},
	abstract = {Anthropogenically induced global climate change has profound implications for marine ecosystems and the economic and social systems that depend upon them. The relationship between temperature and individual performance is reasonably well understood, and much climate-related research has focused on potential shifts in distribution and abundance driven directly by temperature. However, recent work has revealed that both abiotic changes and biological responses in the ocean will be substantially more complex. For example, changes in ocean chemistry may be more important than changes in temperature for the performance and survival of many organisms. Ocean circulation, which drives larval transport, will also change, with important consequences for population dynamics. Furthermore, climatic impacts on one or a few ‘leverage species’ may result in sweeping community-level changes. Finally, synergistic effects between climate and other anthropogenic variables, particularly fishing pressure, will likely exacerbate climate-induced changes. Efforts to manage and conserve living marine systems in the face of climate change will require improvements to the existing predictive framework. Key directions for future research include identifying key demographic transitions that influence population dynamics, predicting changes in the community-level impacts of ecologically dominant species, incorporating populations’ ability to evolve (adapt), and understanding the scales over which climate will change and living systems will respond.},
	language = {en},
	number = {2},
	urldate = {2014-02-18},
	journal = {Ecology Letters},
	author = {Harley, Christopher D. G. and Randall Hughes, A. and Hultgren, Kristin M. and Miner, Benjamin G. and Sorte, Cascade J. B. and Thornber, Carol S. and Rodriguez, Laura F. and Tomanek, Lars and Williams, Susan L.},
	year = {2006},
	keywords = {Anthropogenic climate change, carbon dioxide (CO2), coastal oceanography, community structure, distributional shifts, marine ecosystems, ocean pH, Population dynamics, synergistic effects, temperature},
	pages = {228--241},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/RIJBNXDP/full.html:text/html}
}

@article{brander:climate:2012,
	title = {Climate and current anthropogenic impacts on fisheries},
	volume = {119},
	issn = {0165-0009, 1573-1480},
	url = {http://link.springer.com/10.1007/s10584-012-0541-2},
	doi = {10.1007/s10584-012-0541-2},
	number = {1},
	urldate = {2014-01-28},
	journal = {Climatic Change},
	author = {Brander, Keith},
	month = jul,
	year = {2012},
	pages = {9--21},
	file = {DTU Orbit - Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/AMUGHJXA/Brander and Brander - 2013 - Climate and current anthropogenic impacts on fishe.pdf:application/pdf}
}

@article{pinsky:marine:2013,
	title = {Marine {Taxa} {Track} {Local} {Climate} {Velocities}},
	volume = {341},
	issn = {0036-8075, 1095-9203},
	url = {http://www.sciencemag.org/cgi/doi/10.1126/science.1239352},
	doi = {10.1126/science.1239352},
	number = {6151},
	urldate = {2014-01-06},
	journal = {Science},
	author = {Pinsky, M. L. and Worm, B. and Fogarty, M. J. and Sarmiento, J. L. and Levin, S. A.},
	month = sep,
	year = {2013},
	pages = {1239--1242},
	file = {Pinsky et al. - 2013 - Marine Taxa Track Local Climate Velocities.pdf:/Users/phil/Dropbox/biblio/zotero/storage/4PUDT392/Pinsky et al. - 2013 - Marine Taxa Track Local Climate Velocities.pdf:application/pdf}
}

@article{botsford:importance:2011,
	title = {Importance of age structure in models of the response of upper trophic levels to fishing and climate change},
	volume = {68},
	issn = {1054-3139, 1095-9289},
	url = {http://icesjms.oxfordjournals.org/cgi/doi/10.1093/icesjms/fsr042},
	doi = {10.1093/icesjms/fsr042},
	number = {6},
	urldate = {2014-01-06},
	journal = {ICES Journal of Marine Science},
	author = {Botsford, L. W. and Holland, M. D. and Samhouri, J. F. and White, J. W. and Hastings, A.},
	month = apr,
	year = {2011},
	pages = {1270--1283},
	file = {Botsford et al. 2011 age structure, fishing, climate change - ICES J Mar Sci.pdf:/Users/phil/Dropbox/biblio/zotero/storage/PH7ZUVI9/Botsford et al. 2011 age structure, fishing, climate change - ICES J Mar Sci.pdf:application/pdf}
}

@article{jacobsen:consequences:2014,
	title = {The consequences of balanced harvesting of fish communities},
	volume = {281},
	issn = {0962-8452, 1471-2954},
	url = {http://rspb.royalsocietypublishing.org/content/281/1775/20132701},
	doi = {10.1098/rspb.2013.2701},
	abstract = {Balanced harvesting, where species or individuals are exploited in accordance with their productivity, has been proposed as a way to minimize the effects of fishing on marine fish communities and ecosystems. This calls for a thorough examination of the consequences balanced harvesting has on fish community structure and yield. We use a size- and trait-based model that resolves individual interactions through competition and predation to compare balanced harvesting with traditional selective harvesting, which protects juvenile fish from fishing. Four different exploitation patterns, generated by combining selective or unselective harvesting with balanced or unbalanced fishing, are compared. We find that unselective balanced fishing, where individuals are exploited in proportion to their productivity, produces a slightly larger total maximum sustainable yield than the other exploitation patterns and, for a given yield, the least change in the relative biomass composition of the fish community. Because fishing reduces competition, predation and cannibalism within the community, the total maximum sustainable yield is achieved at high exploitation rates. The yield from unselective balanced fishing is dominated by small individuals, whereas selective fishing produces a much higher proportion of large individuals in the yield. Although unselective balanced fishing is predicted to produce the highest total maximum sustainable yield and the lowest impact on trophic structure, it is effectively a fishery predominantly targeting small forage fish.},
	language = {en},
	number = {1775},
	urldate = {2014-02-02},
	journal = {Proceedings of the Royal Society B: Biological Sciences},
	author = {Jacobsen, Nis S. and Gislason, Henrik and Andersen, Ken H.},
	month = jan,
	year = {2014},
	pmid = {24307676},
	keywords = {balanced harvesting, ecosystem-based fisheries management, maximum sustainable yield, selective fisheries, size spectrum},
	pages = {20132701},
	file = {Jacobsen et al. - 2014 - The consequences of balanced harvesting of fish co.pdf:/Users/phil/Dropbox/biblio/zotero/storage/THASVXE5/Jacobsen et al. - 2014 - The consequences of balanced harvesting of fish co.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/6AP82CU4/20132701.html:text/html}
}

@article{kroeker:meta-analysis:2010,
	title = {Meta-analysis reveals negative yet variable effects of ocean acidification on marine organisms},
	volume = {13},
	issn = {1461-0248},
	doi = {10.1111/j.1461-0248.2010.01518.x},
	abstract = {Ocean acidification is a pervasive stressor that could affect many marine organisms and cause profound ecological shifts. A variety of biological responses to ocean acidification have been measured across a range of taxa, but this information exists as case studies and has not been synthesized into meaningful comparisons amongst response variables and functional groups. We used meta-analytic techniques to explore the biological responses to ocean acidification, and found negative effects on survival, calcification, growth and reproduction. However, there was significant variation in the sensitivity of marine organisms. Calcifying organisms generally exhibited larger negative responses than non-calcifying organisms across numerous response variables, with the exception of crustaceans, which calcify but were not negatively affected. Calcification responses varied significantly amongst organisms using different mineral forms of calcium carbonate. Organisms using one of the more soluble forms of calcium carbonate (high-magnesium calcite) can be more resilient to ocean acidification than less soluble forms (calcite and aragonite). Additionally, there was variation in the sensitivities of different developmental stages, but this variation was dependent on the taxonomic group. Our analyses suggest that the biological effects of ocean acidification are generally large and negative, but the variation in sensitivity amongst organisms has important implications for ecosystem responses.},
	language = {eng},
	number = {11},
	journal = {Ecology letters},
	author = {Kroeker, Kristy J and Kordas, Rebecca L and Crim, Ryan N and Singh, Gerald G},
	month = nov,
	year = {2010},
	pmid = {20958904},
	keywords = {Animals, Aquatic Organisms, Calcification, Physiologic, Calcium, ecosystem, Hydrogen-Ion Concentration, Oceans and Seas, Population dynamics, Reproduction, Seawater, Survival, Water Pollutants},
	pages = {1419--1434}
}

@article{von:gunten:global:2013,
	title = {Global trends in marine primary production},
	url = {http://n.ethz.ch/~kvgunten/projekte/master/term:paper:global:trends:in:marine:productivity.pdf},
	urldate = {2014-06-18},
	author = {von Gunten, Konstantin and Swan, Chantal},
	year = {2013},
	file = {[PDF] from ethz.ch:/Users/phil/Dropbox/biblio/zotero/storage/7CBN4REB/von Gunten and Swan - 2013 - Global trends in marine primary production.pdf:application/pdf}
}

@article{jennings:predicting:2010,
	title = {Predicting the effects of climate change on marine communities and the consequences for fisheries},
	volume = {79},
	url = {http://www.sciencedirect.com/science/article/pii/S0924796309000955},
	number = {3},
	urldate = {2014-02-18},
	journal = {Journal of Marine Systems},
	author = {Jennings, Simon and Brander, Keith},
	year = {2010},
	pages = {418--426},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/IK2GUUVQ/S0924796309000955.html:text/html}
}

@article{macneil:transitional:????,
	title = {Transitional states in marine fisheries: adapting to predicted global change},
	shorttitle = {Transitional states in marine fisheries},
	url = {http://amacneil.webfactional.com/wp-content/docs/macneil:etal:2010.pdf},
	urldate = {2014-02-20},
	author = {MacNeil, M. Aaron and Graham, Nicholas AJ and Cinner, Joshua E. and Dulvy, Nicholas K. and Loring, Philip A. and Jennings, Simon and Polunin, Nicholas VC and Fisk, Aaron T. and McClanahan, Tim R.},
	file = {[PDF] from webfactional.com:/Users/phil/Dropbox/biblio/zotero/storage/9H623A5R/MacNeil et al. - Transitional states in marine fisheries adapting .pdf:application/pdf}
}

@article{kroeker:divergent:2011,
	title = {Divergent ecosystem responses within a benthic marine community to ocean acidification},
	volume = {108},
	issn = {1091-6490},
	doi = {10.1073/pnas.1107789108},
	abstract = {Ocean acidification is predicted to impact all areas of the oceans and affect a diversity of marine organisms. However, the diversity of responses among species prevents clear predictions about the impact of acidification at the ecosystem level. Here, we used shallow water CO(2) vents in the Mediterranean Sea as a model system to examine emergent ecosystem responses to ocean acidification in rocky reef communities. We assessed in situ benthic invertebrate communities in three distinct pH zones (ambient, low, and extreme low), which differed in both the mean and variability of seawater pH along a continuous gradient. We found fewer taxa, reduced taxonomic evenness, and lower biomass in the extreme low pH zones. However, the number of individuals did not differ among pH zones, suggesting that there is density compensation through population blooms of small acidification-tolerant taxa. Furthermore, the trophic structure of the invertebrate community shifted to fewer trophic groups and dominance by generalists in extreme low pH, suggesting that there may be a simplification of food webs with ocean acidification. Despite high variation in individual species' responses, our findings indicate that ocean acidification decreases the diversity, biomass, and trophic complexity of benthic marine communities. These results suggest that a loss of biodiversity and ecosystem function is expected under extreme acidification scenarios.},
	language = {eng},
	number = {35},
	journal = {Proceedings of the National Academy of Sciences of the United States of America},
	author = {Kroeker, Kristy J and Micheli, Fiorenza and Gambi, Maria Cristina and Martz, Todd R},
	month = aug,
	year = {2011},
	pmid = {21844331},
	pmcid = {PMC3167536},
	keywords = {Animals, Aquatic Organisms, Biodiversity, Biomass, Carbon Dioxide, ecosystem, Environment, Hydrogen-Ion Concentration, Oceans and Seas},
	pages = {14515--14520}
}

@article{perry:climate:2005,
	title = {Climate change and distribution shifts in marine fishes},
	volume = {308},
	url = {http://www.sciencemag.org/content/308/5730/1912.short},
	number = {5730},
	urldate = {2014-02-18},
	journal = {Science},
	author = {Perry, Allison L. and Low, Paula J. and Ellis, Jim R. and Reynolds, John D.},
	year = {2005},
	pages = {1912--1915},
	file = {[PDF] from googlecode.com:/Users/phil/Dropbox/biblio/zotero/storage/ICUSZE68/Perry et al. - 2005 - Climate change and distribution shifts in marine f.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/8F9AGXZ8/1912.html:text/html}
}

@article{kuparinen:allee:2014,
	title = {Allee {Effect} and the {Uncertainty} of {Population} {Recovery}},
	copyright = {© 2014 Society for Conservation Biology},
	issn = {1523-1739},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/cobi.12216/abstract},
	doi = {10.1111/cobi.12216},
	abstract = {Recovery of depleted populations is fundamentally important for conservation biology and sustainable resource harvesting. At low abundance, population growth rate, a primary determinant of population recovery, is generally assumed to be relatively fast because competition is low (i.e., negative density dependence). But population growth can be limited in small populations by an Allee effect. This is particularly relevant for collapsed populations or species that have not recovered despite large reductions in, or elimination of, threats. We investigated how an Allee effect can influence the dynamics of recovery. We used Atlantic cod (Gadus morhua) as the study organism and an empirically quantified Allee effect for the species to parameterize our simulations. We simulated recovery through an individual-based mechanistic simulation model and then compared recovery among scenarios incorporating an Allee effect, negative density dependence, and an intermediate scenario. Although an Allee effect significantly slowed recovery, such that population increase could be negligible even after 100 years or more, it also made the time required for biomass rebuilding much less predictable. Our finding that an Allee effect greatly increased the uncertainty in recovery time frames provides an empirically based explanation for why the removal of threat does not always result in the recovery of depleted populations or species.El Efecto Allee y la Incertidumbre de la Recuperación de Poblaciones},
	language = {en},
	urldate = {2014-02-18},
	journal = {Conservation Biology},
	author = {Kuparinen, Anna and Keith, David M. and Hutchings, Jeffrey A.},
	year = {2014},
	keywords = {Allee effect, Atlantic cod, Bacalao del Atlántico, cosecha sustentable, depensación, depensation, efecto Allee, overfishing, population recovery, recuperación de poblaciones, sobrepesca, sustainable harvesting},
	pages = {n/a--n/a},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/XNUXDAPR/abstract.html:text/html}
}

@article{cheung:large-scale:2010,
	title = {Large-scale redistribution of maximum fisheries catch potential in the global ocean under climate change},
	volume = {16},
	copyright = {© 2009 Blackwell Publishing Ltd},
	issn = {1365-2486},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2486.2009.01995.x/abstract},
	doi = {10.1111/j.1365-2486.2009.01995.x},
	abstract = {Previous projection of climate change impacts on global food supply focuses solely on production from terrestrial biomes, ignoring the large contribution of animal protein from marine capture fisheries. Here, we project changes in global catch potential for 1066 species of exploited marine fish and invertebrates from 2005 to 2055 under climate change scenarios. We show that climate change may lead to large-scale redistribution of global catch potential, with an average of 30–70\% increase in high-latitude regions and a drop of up to 40\% in the tropics. Moreover, maximum catch potential declines considerably in the southward margins of semienclosed seas while it increases in poleward tips of continental shelf margins. Such changes are most apparent in the Pacific Ocean. Among the 20 most important fishing Exclusive Economic Zone (EEZ) regions in terms of their total landings, EEZ regions with the highest increase in catch potential by 2055 include Norway, Greenland, the United States (Alaska) and Russia (Asia). On the contrary, EEZ regions with the biggest loss in maximum catch potential include Indonesia, the United States (excluding Alaska and Hawaii), Chile and China. Many highly impacted regions, particularly those in the tropics, are socioeconomically vulnerable to these changes. Thus, our results indicate the need to develop adaptation policy that could minimize climate change impacts through fisheries. The study also provides information that may be useful to evaluate fisheries management options under climate change.},
	language = {en},
	number = {1},
	urldate = {2014-02-24},
	journal = {Global Change Biology},
	author = {Cheung, William W. L. and Lam, Vicky W. Y. and Sarmiento, Jorge L. and Kearney, Kelly and Watson, Reg and Zeller, Dirk and Pauly, Daniel},
	year = {2010},
	keywords = {catch, climate change, fisheries, global, marine, redistribution},
	pages = {24--35},
	file = {LargeScaleRedistributionOfMaximumFisheriesCatchPotential.pdf:/Users/phil/Dropbox/biblio/zotero/storage/DBH6BR7P/LargeScaleRedistributionOfMaximumFisheriesCatchPotential.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/PC4TGTNK/abstract.html:text/html}
}

@article{salinger:climate:2012,
	title = {Climate and oceanic fisheries: recent observations and projections and future needs},
	volume = {119},
	issn = {0165-0009, 1573-1480},
	shorttitle = {Climate and oceanic fisheries},
	url = {http://link.springer.com/10.1007/s10584-012-0652-9},
	doi = {10.1007/s10584-012-0652-9},
	number = {1},
	urldate = {2014-01-28},
	journal = {Climatic Change},
	author = {Salinger, M. J. and Bell, J. D. and Evans, K. and Hobday, A. J. and Allain, V. and Brander, K. and Dexter, P. and Harrison, D. E. and Hollowed, A. B. and Lee, B. and Stefanski, R.},
	month = dec,
	year = {2012},
	pages = {213--221}
}

@article{burrows:pace:2011,
	title = {The pace of shifting climate in marine and terrestrial ecosystems},
	volume = {334},
	url = {http://www.sciencemag.org/content/334/6056/652.short},
	number = {6056},
	urldate = {2014-02-18},
	journal = {Science},
	author = {Burrows, Michael T. and Schoeman, David S. and Buckley, Lauren B. and Moore, Pippa and Poloczanska, Elvira S. and Brander, Keith M. and Brown, Chris and Bruno, John F. and Duarte, Carlos M. and Halpern, Benjamin S.},
	year = {2011},
	pages = {652--655},
	file = {[PDF] from uib-csic.es:/Users/phil/Dropbox/biblio/zotero/storage/W55G7SZ4/Burrows et al. - 2011 - The pace of shifting climate in marine and terrest.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/UHPIDG4M/652.html:text/html}
}

@article{rouyer:combined:2014,
	title = {Combined effects of exploitation and temperature on fish stocks in the {Northeast} {Atlantic}},
	issn = {1054-3139, 1095-9289},
	url = {http://icesjms.oxfordjournals.org/content/early/2014/03/27/icesjms.fsu042},
	doi = {10.1093/icesjms/fsu042},
	abstract = {Rouyer, T., Fromentin, J-M., Hidalgo, M., and Stenseth, N. C. Combined effects of exploitation and temperature on fish stocks in the Northeast Atlantic. – ICES Journal of Marine Science, doi: 10.1093/icesjms/fsu042. Fish stock fluctuations are affected by two potentially confounding forces: the removal of individuals by fisheries and climatic variations affecting the productivity of fish populations. Disentangling the relative importance of these forces has thus been a question of primary importance for fisheries management and conservation. Through the analysis of long-term time-series for 27 fish stocks from the Northeast Atlantic, the present study shows that the sign and intensity of the effect of temperature on biomass are dependent on the geographical location: the stocks located at the southernmost and northernmost latitudes of our study displayed stronger associations with temperature than the stocks located in the middle range of latitudes. As a consequence, the investigation of the combined effects of exploitation and the environment revealed that the stocks at the northern/southern boundaries of the spatial extent of the species were more prone to combined effects. The interplay between geographic location, climate and exploitation thus plays a significant role in fish stock productivity, which is generally ignored during assessment, thus affecting management procedures.},
	language = {en},
	urldate = {2014-03-31},
	journal = {ICES Journal of Marine Science: Journal du Conseil},
	author = {Rouyer, Tristan and Fromentin, Jean-Marc and Hidalgo, Manuel and Stenseth, Nils C.},
	month = mar,
	year = {2014},
	keywords = {combined climate/exploitation effect, exploitation, fish stocks, Northeast Atlantic, response to climate, time-series},
	pages = {fsu042},
	file = {Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/JZP929CK/icesjms.fsu042.html:text/html}
}

@article{caldeira:anthropogenic:2003,
	title = {Anthropogenic carbon and ocean {pH}},
	volume = {425},
	shorttitle = {Oceanography},
	url = {http://www.nature.com/nature/journal/v425/n6956/abs/425365a.html},
	number = {6956},
	urldate = {2014-02-19},
	journal = {Nature},
	author = {Caldeira, Ken and Wickett, Michael E.},
	year = {2003},
	pages = {365--365},
	file = {[PDF] from wwu.edu:/Users/phil/Dropbox/biblio/zotero/storage/93GHBKVT/Caldeira and Wickett - 2003 - Oceanography anthropogenic carbon and ocean pH.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/MVVBG8UV/425365a.html:text/html}
}

@article{brander:overconfidence:2013,
	title = {Overconfidence in model projections},
	volume = {70},
	issn = {1054-3139, 1095-9289},
	url = {http://icesjms.oxfordjournals.org/cgi/doi/10.1093/icesjms/fst055},
	doi = {10.1093/icesjms/fst055},
	number = {6},
	urldate = {2014-01-28},
	journal = {ICES Journal of Marine Science},
	author = {Brander, K. and Neuheimer, A. and Andersen, K. H. and Hartvig, M.},
	month = aug,
	year = {2013},
	keywords = {climate, fisheries, marine ecosystems, model reliability, projections},
	pages = {1065--1068},
	file = {Full Text PDF:/Users/phil/Dropbox/biblio/zotero/storage/BX385M9A/Brander et al. - 2013 - Overconfidence in model projections.pdf:application/pdf;ICES J. Mar. Sci.-2013-Brander-1065-8.pdf:/Users/phil/Dropbox/biblio/zotero/storage/A7IPTR5X/ICES J. Mar. Sci.-2013-Brander-1065-8.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/N8Q8T7H6/1065.html:text/html}
}

@article{verberk:oxygen:2011,
	title = {Oxygen supply in aquatic ectotherms: partial pressure and solubility together explain biodiversity and size patterns},
	volume = {92},
	shorttitle = {Oxygen supply in aquatic ectotherms},
	url = {http://www.esajournals.org/doi/abs/10.1890/10-2369.1},
	number = {8},
	urldate = {2014-06-18},
	journal = {Ecology},
	author = {Verberk, Wilco CEP and Bilton, David T. and Calosi, Piero and Spicer, John I.},
	year = {2011},
	pages = {1565--1572},
	file = {[PDF] from ucv.ve:/Users/phil/Dropbox/biblio/zotero/storage/7DGB3PED/Verberk et al. - 2011 - Oxygen supply in aquatic ectotherms partial press.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/TKTRNTBR/cookieAbsent.html:text/html}
}

@article{hjermann:spatial:2013,
	title = {Spatial analysis of {North} {Sea} cod recruitment: concurrent effects of changes in spawning stock biomass, temperature and herring abundance},
	volume = {480},
	shorttitle = {Spatial analysis of {North} {Sea} cod recruitment},
	url = {http://www.int-res.com/articles/theme/m480p263.pdf},
	urldate = {2014-02-18},
	journal = {Mar Ecol Prog Ser},
	author = {Hjermann, Dag Ø and Fisher, Jonathan AD and Rouyer, Tristan and Frank, Kenneth T. and Stenseth, Nils C.},
	year = {2013},
	pages = {263--275},
	file = {[PDF] from int-res.com:/Users/phil/Dropbox/biblio/zotero/storage/QFGVFD3I/Hjermann et al. - 2013 - Spatial analysis of North Sea cod recruitment con.pdf:application/pdf}
}

@article{bacheler:density-dependent:2009,
	title = {Density-dependent, landscape, and climate effects on spawning distribution of walleye pollock {Theragra} chalcogramma},
	volume = {391},
	url = {https://grunt.sefsc.noaa.gov/FEBpub/bacheler:etal:2009b:MEPS.pdf},
	urldate = {2014-02-18},
	journal = {Mar. Ecol. Prog. Ser},
	author = {Bacheler, Nathan M. and Bailey, Kevin M. and Ciannelli, Lorenzo and Bartolino, Valerio and Chan, Kung-Sik},
	year = {2009},
	pages = {1--12}
}

@article{woodworth-jefcoats:ecosystem:2013,
	title = {Ecosystem size structure response to 21st century climate projection: large fish abundance decreases in the central {North} {Pacific} and increases in the {California} {Current}},
	volume = {19},
	shorttitle = {Ecosystem size structure response to 21st century climate projection},
	url = {http://onlinelibrary.wiley.com/doi/10.1111/gcb.12076/full},
	number = {3},
	urldate = {2014-06-18},
	journal = {Global change biology},
	author = {Woodworth-Jefcoats, Phoebe A. and Polovina, Jeffrey J. and Dunne, John P. and Blanchard, Julia L.},
	year = {2013},
	pages = {724--733},
	file = {[PDF] from researchgate.net:/Users/phil/Dropbox/biblio/zotero/storage/DT4DDA9T/Woodworth-Jefcoats et al. - 2013 - Ecosystem size structure response to 21st century .pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/92FBZNBQ/full.html:text/html}
}

@article{durant:population:2013,
	title = {Population growth across heterogeneous environments: effects of harvesting and age structure},
	shorttitle = {Population growth across heterogeneous environments},
	url = {https://www.duo.uio.no/handle/10852/37232},
	urldate = {2014-02-18},
	author = {Durant, Joel Marcel and Hidalgo, Manuel and Rouyer, Tristan Alexander and Hjermann, Dag Øystein and Ciannelli, Lorenzo and Eikeset, Anne Marie and Yaragina, Natalia A. and Stenseth, Nils Christian},
	year = {2013},
	file = {[PDF] from uio.no:/Users/phil/Dropbox/biblio/zotero/storage/PWZMD348/Durant et al. - 2013 - Population growth across heterogeneous environment.pdf:application/pdf;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/CKN9KT32/37232.html:text/html}
}

@article{brose:climate:2012,
	title = {Climate change in size-structured ecosystems},
	volume = {367},
	url = {http://rstb.royalsocietypublishing.org/content/367/1605/2903.short},
	number = {1605},
	urldate = {2014-06-17},
	journal = {Philosophical Transactions of the Royal Society B: Biological Sciences},
	author = {Brose, Ulrich and Dunne, Jennifer A. and Montoya, Jose M. and Petchey, Owen L. and Schneider, Florian D. and Jacob, Ute},
	year = {2012},
	pages = {2903--2912},
	file = {[HTML] from royalsocietypublishing.org:/Users/phil/Dropbox/biblio/zotero/storage/KDH35H68/2903.html:text/html;[HTML] from royalsocietypublishing.org:/Users/phil/Dropbox/biblio/zotero/storage/BUZ3KUHG/2903.html:text/html;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/4X8BAX9B/2903.html:text/html;Snapshot:/Users/phil/Dropbox/biblio/zotero/storage/ASRS7J2J/2903.html:text/html}
}

@article{hsieh:spatial:2008,
	title = {Spatial analysis shows that fishing enhances the climatic sensitivity of marine fishes},
	volume = {65},
	url = {http://www.nrcresearchpress.com/doi/abs/10.1139/f08-017},
	number = {5},
	urldate = {2014-02-24},
	journal = {Canadian Journal of Fisheries

license: MIT

license_type: permissive

branch_name: refs/heads/master

extension: bib