text:
@Preamble{ " \newcommand{\noop}[1]{} " }

\begin{thebibliography}{10}

%1D LL

@article{yang1969thermodynamics,
	title={Thermodynamics of a one-dimensional system of bosons with repulsive delta-function interaction},
	author={Yang, Chen-Ning and Yang, Cheng P},
	journal={Journal of Mathematical Physics},
	volume={10},
	number={7},
	pages={1115--1122},
	year={1969},
	publisher={American Institute of Physics}
}

@article{bethe1931theorie,
	title={Zur theorie der metalle},
	author={Bethe, Hans},
	journal={Zeitschrift f{\"u}r Physik},
	volume={71},
	number={3},
	pages={205--226},
	year={1931},
	publisher={Springer}
}

@article{girardeau1960relationship,
  title={Relationship between systems of impenetrable bosons and fermions in one dimension},
  author={Girardeau, Marvin},
  journal={Journal of Mathematical Physics},
  volume={1},
  number={6},
  pages={516--523},
  year={1960},
  publisher={American Institute of Physics}
}

@article{lieb1963exact,
  title={Exact analysis of an interacting Bose gas. I. The general solution and the ground state},
  author={Lieb, Elliott H and Liniger, Werner},
  journal={Physical Review},
  volume={130},
  number={4},
  pages={1605},
  year={1963},
  publisher={APS}
}

@article{guan2011polylogs,
  title={Polylogs, thermodynamics and scaling functions of one-dimensional quantum many-body systems},
  author={Guan, Xi-Wen and Batchelor, Murray T},
  journal={Journal of Physics A: Mathematical and Theoretical},
  volume={44},
  number={10},
  pages={102001},
  year={2011},
  publisher={IOP Publishing}
}

@article{jiang2015understanding,
  title={Understanding many-body physics in one dimension from the {L}ieb--{L}iniger model},
  author={Jiang, Yu-Zhu and Chen, Yang-Yang and Guan, Xi-Wen},
  journal={Chinese Physics B},
  volume={24},
  number={5},
  pages={050311},
  year={2015},
  publisher={IOP Publishing}
}

@article{astrakharchik2010low,
  title={Low-dimensional weakly interacting Bose gases: Nonuniversal equations of state},
  author={Astrakharchik, GE and Boronat, J and Kurbakov, IL and Lozovik, Yu E and Mazzanti, F},
  journal={Physical Review A},
  volume={81},
  number={1},
  pages={013612},
  year={2010},
  publisher={APS}
}

@article{de2019beyond,
  title={Beyond-Luttinger-liquid thermodynamics of a one-dimensional Bose gas with repulsive contact interactions},
  author={De Rosi, Giulia and Massignan, Pietro and Lewenstein, Maciej and Astrakharchik, Grigori E},
  journal={Physical Review Research},
  volume={1},
  number={3},
  pages={033083},
  year={2019},
  publisher={APS}
}

@article{cmp/1104252974,
	author = {T. C. Dorlas},
	title = {{Orthogonality and completeness of the Bethe ansatz eigenstates of the nonlinear Schroedinger model}},
	volume = {154},
	journal = {Communications in Mathematical Physics},
	number = {2},
	publisher = {Springer},
	pages = {347 -- 376},
	year = {1993},
	doi = {cmp/1104252974},
	URL = {https://doi.org/}
}

% 1D Bose gas
@article{agerskov2022ground,
	title={Ground state energy of dilute Bose gases in 1D},
	author={Agerskov, Johannes and Reuvers, Robin and Solovej, Jan Philip},
	journal={arXiv preprint arXiv:2203.17183},
	year={2022}
}

@article{petrov2000regimes,
	title={Regimes of quantum degeneracy in trapped 1D gases},
	author={Petrov, DS and Shlyapnikov, GV and Walraven, JTM},
	journal={Physical Review Letters},
	volume={85},
	number={18},
	pages={3745},
	year={2000},
	publisher={APS}
}

@article{dunjko2001bosons,
	title={Bosons in cigar-shaped traps: Thomas-Fermi regime, Tonks-Girardeau regime, and in between},
	author={Dunjko, Vanja and Lorent, Vincent and Olshanii, Maxim},
	journal={Physical Review Letters},
	volume={86},
	number={24},
	pages={5413},
	year={2001},
	publisher={APS}
}

% Technical aspects

@book{folland1999real,
	title={Real analysis: modern techniques and their applications},
	author={Folland, Gerald B},
	volume={40},
	year={1999},
	publisher={John Wiley \& Sons}
}

@article{hohenberg1967existence,
	title={Existence of long-range order in one and two dimensions},
	author={Hohenberg, Pierre C},
	journal={Physical Review},
	volume={158},
	number={2},
	pages={383},
	year={1967},
	publisher={APS}
}

@article{mermin1966absence,
	title={Absence of ferromagnetism or antiferromagnetism in one-or two-dimensional isotropic Heisenberg models},
	author={Mermin, N David and Wagner, Herbert},
	journal={Physical Review Letters},
	volume={17},
	number={22},
	pages={1133},
	year={1966},
	publisher={APS}
}

@article{fung1981validity,
	title={Validity of the Bethe--Yang hypothesis in the delta-function interaction problem},
	author={Fung, Ming-Kong},
	journal={Journal of Mathematical Physics},
	volume={22},
	number={9},
	pages={2017--2019},
	year={1981},
	publisher={American Institute of Physics}
}

@book{gaudin2014bethe,
	title={The Bethe Wavefunction
	The Bethe Wavefunction},
	author={Michel Gaudin},
	year={2014},
	publisher={Cambridge University Press}
}

@article{william1991representation,
	title={Representation Theory: a first course},
	author={William, Fulton and Joe, Harris},
	journal={Graduate Texts in Mathematics, Readings in Mathematics. Springer-Verlag},
	volume={129},
	year={1991}
}

@book{fulton1997young,
	title={Young tableaux: with applications to representation theory and geometry},
	author={Fulton, Mr William and Fulton, William},
	number={35},
	year={1997},
	publisher={Cambridge University Press}
}

@book{lieb2001analysis,
	title={Analysis},
	author={Lieb, E.H. and Loss, M.},
	isbn={9780821827833},
	lccn={01018215},
	series={Crm Proceedings \& Lecture Notes},
	url={https://books.google.dk/books?id=Eb\_7oRorXJgC},
	year={2001},
	publisher={American Mathematical Society}
}

@article{hult1938,
	title={{\"Uber das Austauschproblem eines Kristalles}},
	author={Hulthén, L.},
	journal={Ark. Met. Astron. Fysik },
	volume={26A},
	number={Na. 11},
	year={1938},
}

@book{mattis2012theory,
	title={The Theory of Magnetism I: Statics and Dynamics},
	author={Mattis, D.C.},
	isbn={9783642832383},
	series={Springer Series in Solid-State Sciences},
	url={https://books.google.dk/books?id=u6r1CAAAQBAJ},
	year={2012},
	publisher={Springer Berlin Heidelberg}
}

@book{albeverio2012solvable,
	title={Solvable Models in Quantum Mechanics},
	author={Albeverio, S. and Gesztesy, F. and Hoegh-Krohn, R. and Holden, H.},
	isbn={9783642882012},
	series={Theoretical and Mathematical Physics},
	url={https://books.google.dk/books?id=BS3wCAAAQBAJ},
	year={2012},
	publisher={Springer Berlin Heidelberg}
}

@book{reed1981functional,
	title={I: Functional Analysis},
	author={Reed, M. and Simon, B.},
	isbn={9780080570488},
	series={Methods of Modern Mathematical Physics},
	url={https://books.google.dk/books?id=rpFTTjxOYpsC},
	year={1981},
	publisher={Elsevier Science}
}

@book{reed1978iv,
	title={IV: Analysis of Operators},
	author={Reed, M. and Simon, B.},
	isbn={9780080570457},
	series={Methods of Modern Mathematical Physics},
	url={https://books.google.dk/books?id=dnjNCgAAQBAJ},
	year={1978},
	publisher={Elsevier Science}
}

@book{adams1975sobolev,
	title={Sobolev Spaces},
	author={Adams, R.A.},
	year={1975},
	publisher={Academic press, New York}
}

@book{robinson2014thermodynamic,
	title={The {T}hermodynamic {P}ressure in {Q}uantum {S}tatistical {M}echanics},
	author={Robinson, D.W.},
	isbn={9783662205105},
	series={Lecture Notes in Physics},
	url={https://books.google.dk/books?id=IfHuoAEACAAJ},
	year={1971},
	publisher={Springer Berlin Heidelberg}
}

@book{lieb2006mathematics,
	title={The {M}athematics of the {B}ose {G}as and its {C}ondensation},
	author={Lieb, E.H. and Seiringer, R. and Solovej, J.P. and Yngvason, J.},
	isbn={9783764373375},
	lccn={2005048218},
	series={Oberwolfach Seminars},
	url={https://books.google.dk/books?id=4hPAR3uw35IC},
	year={2006},
	publisher={Birkh{\"a}user Basel}
}

@book{evans1991measure,
	title={Measure Theory and Fine Properties of Functions},
	author={Evans, L.C. and Gariepy, R.F.},
	isbn={9780849371578},
	lccn={91030277},
	series={Studies in Advanced Mathematics},
	url={https://books.google.dk/books?id=HZONacVPGlMC},
	year={1991},
	publisher={Taylor \& Francis}
}

@book{grisvard2011elliptic,
	title={Elliptic Problems in Nonsmooth Domains},
	author={Grisvard, P.},
	isbn={9781611972023},
	lccn={2011028564},
	series={Classics in Applied Mathematics},
	url={https://books.google.dk/books?id=lJTtujsZSgkC},
	year={2011},
	publisher={Society for Industrial and Applied Mathematics}
}

%3D Bose gas

@article{yin2010free,
	title={Free energies of dilute Bose gases: upper bound},
	author={Yin, Jun},
	journal={Journal of Statistical Physics},
	volume={141},
	number={4},
	pages={683--726},
	year={2010},
	publisher={Springer}
}

@article{lieb1999ground,
	title={The ground state energy of a dilute Bose gas},
	author={Lieb, Elliott H and Yngvason, Jakob},
	journal={Differential Equations and Mathematical Physics, University of Alabama, Birmingham},
	publisher={AMS and International Press of Boston},
	year={1999}
}

@article{lenz1929wellenfunktion,
  title={Die {W}ellenfunktion und {G}eschwindigkeitsverteilung des entarteten {G}ases},
  author={Lenz, W},
  journal={Zeitschrift f{\"u}r Physik},
  volume={56},
  number={11},
  pages={778--789},
  year={1929},
  publisher={Springer}
}

@article{bogoliubov1947theory,
  title={On the theory of superfluidity},
  author={Bogoliubov, N N},
  journal={Proc. Inst. Math. Kiev},
  volume={9},
  pages={89--103},
  year={1947},
  note={Rus. Trans Izv. Akad. Nauk Ser. Fiz. 11, 77 (1947), Eng. Trans. J. Phys. (USSR), 11, 23 (1947)}
}

@article{lee1957eigenvalues,
  title={Eigenvalues and eigenfunctions of a {B}ose system of hard spheres and its low-temperature properties},
  author={Lee, Tsin D and Huang, Kerson and Yang, Chen N},
  journal={Physical Review},
  volume={106},
  number={6},
  pages={1135},
  year={1957},
  publisher={APS}
}

@article{lee1957many,
	title={Many-body problem in quantum mechanics and quantum statistical mechanics},
	author={Lee, TD and Yang, CN},
	journal={Physical Review},
	volume={105},
	number={3},
	pages={1119},
	year={1957},
	publisher={APS}
}

@incollection{lieb1998ground,
  title={Ground state energy of the low density {B}ose gas},
  author={Lieb, Elliolt H and Yngvason, Jakob},
  booktitle={The Stability of Matter: From Atoms to Stars},
  pages={755--758},
  year={1998},
  publisher={Springer}
}

@article{yau2009second,
  title={The second order upper bound for the ground energy of a {B}ose gas},
  author={Yau, Horng-Tzer and Yin, Jun},
  journal={Journal of Statistical Physics},
  volume={136},
  number={3},
  pages={453--503},
  year={2009},
  publisher={Springer}
}

@inproceedings{basti2021new,
  title={A new second-order upper bound for the ground state energy of dilute {B}ose gases},
  author={Basti, Giulia and Cenatiempo, Serena and Schlein, Benjamin},
  booktitle={Forum of Mathematics, Sigma},
  volume={9},
  year={2021},
  organization={Cambridge University Press}
}

@article{fournais2020energy,
  title={The energy of dilute {B}ose gases},
  author={Fournais, S{\o}ren and Solovej, Jan Philip},
  journal={Annals of Mathematics},
  volume={192},
  number={3},
  pages={893--976},
  year={2020},
  publisher={JSTOR}
}

@article{fournais2021energy,
  title={The energy of dilute {B}ose gases {II}: The general case},
  author={Fournais, S{\o}ren and Solovej, Jan Philip},
  journal={arXiv preprint arXiv:2108.12022},
  year={2021}
}

@article{dyson1957ground,
  title={Ground-state energy of a hard-sphere gas},
  author={Dyson, Freeman John},
  journal={Physical Review},
  volume={106},
  number={1},
  pages={20},
  year={1957},
  publisher={APS}
}
% 3D experimental
@article{navon2010equation,
  title={The equation of state of a low-temperature Fermi gas with tunable interactions},
  author={Navon, Nir and Nascimbene, Sylvain and Chevy, Fr{\'e}d{\'e}ric and Salomon, Christophe},
  journal={Science},
  volume={328},
  number={5979},
  pages={729--732},
  year={2010},
  publisher={American Association for the Advancement of Science}
}

%3D Fermi gas
@article{lieb2005ground,
	title={Ground-state energy of the low-density Fermi gas},
	author={Lieb, Elliott H and Seiringer, Robert and Solovej, Jan Philip},
	journal={Physical Review A},
	volume={71},
	number={5},
	pages={053605},
	year={2005},
	publisher={APS}
}

@article{lauritsen2023ground,
	title={Ground state energy of the dilute spin-polarized Fermi gas: Upper bound via cluster expansion},
	author={Lauritsen, Asbj{\o}rn B{\ae}kgaard and Seiringer, Robert},
	journal={arXiv preprint arXiv:2301.04894},
	year={2023}
}

@article{lauritsen2023almost,
	title={Almost optimal upper bound for the ground state energy of a dilute Fermi gas via cluster expansion},
	author={Lauritsen, Asbj{\o}rn B{\ae}kgaard},
	journal={arXiv preprint arXiv:2301.08005},
	year={2023}
}

@inproceedings{falconi2021dilute,
	title={The dilute Fermi gas via Bogoliubov theory},
	author={Falconi, Marco and Giacomelli, Emanuela L and Hainzl, Christian and Porta, Marcello},
	booktitle={Annales Henri Poincar{\'e}},
	volume={22},
	pages={2283--2353},
	year={2021},
	organization={Springer}
}

@article{giacomelli2022optimal,
	title={An optimal upper bound for the dilute Fermi gas in three dimensions},
	author={Giacomelli, Emanuela L},
	journal={arXiv preprint arXiv:2212.11832},
	year={2022}
}

% 2D Bose gas

@article{hines1978hard,
	title={Hard-disc Bose gas},
	author={Hines, DF and Frankel, NE and Mitchell, DJ},
	journal={Physics Letters A},
	volume={68},
	number={1},
	pages={12--14},
	year={1978},
	publisher={Elsevier}
}

@article{schick1971two,
  title={Two-dimensional system of hard-core bosons},
  author={Schick, M},
  journal={Physical Review A},
  volume={3},
  number={3},
  pages={1067},
  year={1971},
  publisher={APS}
}

@article{lieb2001ground,
  title={The ground state energy of a dilute two-dimensional {B}ose gas},
  author={Lieb, Elliott H and Yngvason, Jakob},
  journal={Journal of Statistical Physics},
  volume={103},
  number={3},
  pages={509--526},
  year={2001},
  publisher={Springer}
}

@article{andersen2002ground,
  title={Ground state pressure and energy density of an interacting homogeneous {B}ose gas in two dimensions},
  author={Andersen, J O},
  journal={The European Physical Journal B-Condensed Matter and Complex Systems},
  volume={28},
  number={4},
  pages={389--396},
  year={2002},
  publisher={Springer}
}

@article{mora2009ground,
  title={Ground state energy of the two-dimensional weakly interacting {B}ose gas: first correction beyond {B}ogoliubov theory},
  author={Mora, Christophe and Castin, Yvan},
  journal={Physical Review Letters},
  volume={102},
  number={18},
  pages={180404},
  year={2009},
  publisher={APS}
}

@article{fournais2019ground,
  title={Ground state energy of a dilute two-dimensional {B}ose gas from the Bogoliubov free energy functional},
  author={Fournais, S{\o}ren and Napi{\'o}rkowski, Marcin and Reuvers, Robin and Solovej, Jan Philip},
  journal={Journal of Mathematical Physics},
  volume={60},
  number={7},
  pages={071903},
  year={2019},
  publisher={AIP Publishing LLC}
}

@article{fournais2022ground,
	title={The Ground State Energy of a Two-Dimensional Bose Gas},
	author={Fournais, S and Girardot, T and Junge, L and Morin, L and Olivieri, M},
	journal={arXiv preprint arXiv:2206.11100},
	year={2022}
}

@article{huang1957quantum,
	title={Quantum-mechanical many-body problem with hard-sphere interaction},
	author={Huang, Kerson and Yang, Chen Ning},
	journal={Physical review},
	volume={105},
	number={3},
	pages={767},
	year={1957},
	publisher={APS}
}

%confinement

@article{olshanii1998atomic,
  title={Atomic scattering in the presence of an external confinement and a gas of impenetrable bosons},
  author={Olshanii, Maxim},
  journal={Physical Review Letters},
  volume={81},
  number={5},
  pages={938},
  year={1998},
  publisher={APS}
}

@article{lieb2004one,
  title={One-dimensional behavior of dilute, trapped {B}ose gases},
  author={Lieb, Elliott H and Seiringer, Robert and Yngvason, Jakob},
  journal={Communications in mathematical physics},
  volume={244},
  number={2},
  pages={347--393},
  year={2004},
  publisher={Springer}
}
@article{lieb2003one,
  title={One-dimensional bosons in three-dimensional traps},
  author={Lieb, Elliott H and Seiringer, Robert and Yngvason, Jakob},
  journal={Physical Review Letters},
  volume={91},
  number={15},
  pages={150401},
  year={2003},
  publisher={APS}
}
@article{seiringer2008lieb,
  title={The {L}ieb-{L}iniger model as a limit of dilute bosons in three dimensions},
  author={Seiringer, Robert and Yin, Jun},
  journal={Communications in mathematical physics},
  volume={284},
  number={2},
  pages={459--479},
  year={2008},
  publisher={Springer}
}
% reviews perhaps relevant for confinement
@article{bloch2008many,
  title={Many-body physics with ultracold gases},
  author={Bloch, Immanuel and Dalibard, Jean and Zwerger, Wilhelm},
  journal={Reviews of modern physics},
  volume={80},
  number={3},
  pages={885},
  year={2008},
  publisher={APS}
}

@article{cazalilla2011one,
  title={One dimensional bosons: {F}rom condensed matter systems to ultracold gases},
  author={Cazalilla, MA and Citro, Roberta and Giamarchi, Thierry and Orignac, Edmond and Rigol, Marcos},
  journal={Reviews of Modern Physics},
  volume={83},
  number={4},
  pages={1405},
  year={2011},
  publisher={APS}
}
%negative c perhaps relevant for confinement
@article{mcguire1964study,
  title={Study of exactly soluble one-dimensional {$N$}-body problems},
  author={McGuire, James B},
  journal={Journal of Mathematical Physics},
  volume={5},
  number={5},
  pages={622--636},
  year={1964},
  publisher={American Institute of Physics}
}

@article{calabrese2007correlation,
  title={Correlation functions of the one-dimensional attractive {B}ose gas},
  author={Calabrese, Pasquale and Caux, Jean-S{\'e}bastien},
  journal={Physical Review Letters},
  volume={98},
  number={15},
  pages={150403},
  year={2007},
  publisher={APS}
}

%Momentum distribution

@article{lenard1964momentum,
  title={Momentum distribution in the ground state of the one-dimensional system of impenetrable bosons},
  author={Lenard, Andrew},
  journal={Journal of Mathematical Physics},
  volume={5},
  number={7},
  pages={930--943},
  year={1964},
  publisher={American Institute of Physics}
}

@article{vaidya1979one,
  title={One particle reduced density matrix of impenetrable bosons in one dimension at zero temperature},
  author={Vaidya, Hemant G and Tracy, CA},
  journal={Journal of Mathematical Physics},
  volume={20},
  number={11},
  pages={2291--2312},
  year={1979},
  publisher={American Institute of Physics}
}

@article{colcelli2018deviations,
  title={Deviations from off-diagonal long-range order in one-dimensional quantum systems},
  author={Colcelli, Andrea and Mussardo, Giuseppe and Trombettoni, Andrea},
  journal={EPL (Europhysics Letters)},
  volume={122},
  number={5},
  pages={50006},
  year={2018},
  publisher={IOP Publishing}
}

% anyons

@article{kundu1999exact,
  title={Exact solution of double $\delta$ function Bose gas through an interacting anyon gas},
  author={Kundu, Anjan},
  journal={Physical Review Letters},
  volume={83},
  number={7},
  pages={1275},
  year={1999},
  publisher={APS}
}

@article{haldane1991fractional,
  title={‘‘Fractional statistics’’in arbitrary dimensions: a generalization of the {P}auli principle},
  author={Haldane, F Duncan M},
  journal={Physical Review Letters},
  volume={67},
  number={8},
  pages={937},
  year={1991},
  publisher={APS}
}

@article{leinaas1977theory,
  title={On the theory of identical particles},
  author={Leinaas, Jon M and Myrheim, Jan},
  journal={Il Nuovo Cimento B (1971-1996)},
  volume={37},
  number={1},
  pages={1--23},
  year={1977},
  publisher={Springer}
}

@article{keilmann2011statistically,
  title={Statistically induced phase transitions and anyons in 1D optical lattices},
  author={Keilmann, Tassilo and Lanzmich, Simon and McCulloch, Ian and Roncaglia, Marco},
  journal={Nature communications},
  volume={2},
  number={1},
  pages={1--7},
  year={2011},
  publisher={Nature Publishing Group}
}

@article{batchelor2006one,
  title={One-dimensional interacting anyon gas: low-energy properties and {H}aldane exclusion statistics},
  author={Batchelor, Murray T and Guan, X-W and Oelkers, Norman},
  journal={Physical Review Letters},
  volume={96},
  number={21},
  pages={210402},
  year={2006},
  publisher={APS}
}
@article{hao2008ground,
  title={Ground-state properties of one-dimensional anyon gases},
  author={Hao, Yajiang and Zhang, Yunbo and Chen, Shu},
  journal={Physical Review A},
  volume={78},
  number={2},
  pages={023631},
  year={2008},
  publisher={APS}
}

@article{bonkhoff2021bosonic,
  title={Bosonic continuum theory of one-dimensional lattice anyons},
  author={Bonkhoff, Martin and J{\"a}gering, Kevin and Eggert, Sebastian and Pelster, Axel and Thorwart, Michael and Posske, Thore},
  journal={Physical Review Letters},
  volume={126},
  number={16},
  pages={163201},
  year={2021},
  publisher={APS}
}

@article{posske2017second,
  title={Second quantization of {L}einaas-{M}yrheim anyons in one dimension and their relation to the Lieb-Liniger model},
  author={Posske, Thore and Trauzettel, Bj{\"o}rn and Thorwart, Michael},
  journal={Physical Review B},
  volume={96},
  number={19},
  pages={195422},
  year={2017},
  publisher={APS}
}

% particles with spin

@article{marshall1955antiferromagnetism,
	title={Antiferromagnetism},
	author={Marshall, W},
	journal={Proceedings of the Royal Society of London. Series A. Mathematical and Physical Sciences},
	volume={232},
	number={1188},
	pages={48--68},
	year={1955},
	publisher={The Royal Society London}
}

@article{lieb1962ordering,
	title={Ordering energy levels of interacting spin systems},
	author={Lieb, Elliott and Mattis, Daniel},
	journal={Journal of Mathematical Physics},
	volume={3},
	number={4},
	pages={749--751},
	year={1962},
	publisher={American Institute of Physics}
}

@article{lieb1962theory,
  title={Theory of ferromagnetism and the ordering of electronic energy levels},
  author={Lieb, Elliott and Mattis, Daniel},
  journal={Physical Review},
  volume={125},
  number={1},
  pages={164--172},
  year={1962},
  publisher={American Institute of Physics Publising LLC}
}

@article{guan2011analytical,
  title={Analytical study of the Fredholm equations for 1{D} two-component {F}ermions with delta-function interaction},
  author={Guan, Xi-Wen and Ma, Zhong-Qi},
  journal={arxiv: 1110.2821},
  year={2011}
}

@article{guan2012one,
  title={One-dimensional multicomponent fermions with $\delta$-function interaction in strong-and weak-coupling limits: $\kappa$-component Fermi gas},
  author={Guan, Xi-Wen and Ma, Zhong-Qi and Wilson, Brendan},
  journal={Physical Review A},
  volume={85},
  number={3},
  pages={033633},
  year={2012},
  publisher={APS}
}

@article{yang1967some,
  title={Some exact results for the many-body problem in one dimension with repulsive delta-function interaction},
  author={Yang, Chen-Ning},
  journal={Physical Review Letters},
  volume={19},
  number={23},
  pages={1312},
  year={1967},
  publisher={APS}
}

@article{gaudin1967systeme,
  title={Un systeme a une dimension de fermions en interaction},
  author={Gaudin, M},
  journal={Physics Letters A},
  volume={24},
  number={1},
  pages={55--56},
  year={1967},
  publisher={Elsevier}
}

@article{girardeau2006ground,
  title={Ground and excited states of spinor {F}ermi gases in tight waveguides and the {L}ieb-{L}iniger-{H}eisenberg model},
  author={Girardeau, MD},
  journal={Physical Review Letters},
  volume={97},
  number={21},
  pages={210401},
  year={2006},
  publisher={APS}
}

@article{sutherland1968further,
  title={Further results for the many-body problem in one dimension},
  author={Sutherland, Bill},
  journal={Physical Review Letters},
  volume={20},
  number={3},
  pages={98},
  year={1968},
  publisher={APS}
}

% effective spin chain 1D model
@article{yang2016effective,
	title={Effective spin-chain model for strongly interacting one-dimensional atomic gases with an arbitrary spin},
	author={Yang, Lijun and Cui, Xiaoling},
	journal={Physical Review A},
	volume={93},
	number={1},
	pages={013617},
	year={2016},
	publisher={APS}
}

@article{volosniev2015engineering,
	title={Engineering the dynamics of effective spin-chain models for strongly interacting atomic gases},
	author={Volosniev, Artem G and Petrosyan, D and Valiente, M and Fedorov, DV and Jensen, AS and Zinner, Nikolaj Thomas},
	journal={Physical Review A},
	volume={91},
	number={2},
	pages={023620},
	year={2015},
	publisher={APS}
}

% experiments 1D

@article{schreck2001quasipure,
  title={Quasipure Bose-Einstein condensate immersed in a {F}ermi sea},
  author={Schreck, F and Khaykovich, Lev and Corwin, KL and Ferrari, G and Bourdel, Thomas and Cubizolles, Julien and Salomon, Christophe},
  journal={Physical Review Letters},
  volume={87},
  number={8},
  pages={080403},
  year={2001},
  publisher={APS}
}

@article{gorlitz2001realization,
  title={Realization of {B}ose-{E}instein condensates in lower dimensions},
  author={G{\"o}rlitz, A and Vogels, JM and Leanhardt, AE and Raman, C and Gustavson, TL and Abo-Shaeer, JR and Chikkatur, AP and Gupta, S and Inouye, S and Rosenband, T and others},
  journal={Physical Review Letters},
  volume={87},
  number={13},
  pages={130402},
  year={2001},
  publisher={APS}
}

@article{greiner2001exploring,
  title={Exploring phase coherence in a 2{D} lattice of {B}ose-{E}instein condensates},
  author={Greiner, Markus and Bloch, Immanuel and Mandel, Olaf and H{\"a}nsch, Theodor W and Esslinger, Tilman},
  journal={Physical Review Letters},
  volume={87},
  number={16},
  pages={160405},
  year={2001},
  publisher={APS}
}

@article{moritz2003exciting,
  title={Exciting collective oscillations in a trapped 1{D} gas},
  author={Moritz, Henning and St{\"o}ferle, Thilo and K{\"o}hl, Michael and Esslinger, Tilman},
  journal={Physical Review Letters},
  volume={91},
  number={25},
  pages={250402},
  year={2003},
  publisher={APS}
}

repository: johannespwt/PhD-QMATH

repo_name: johannespwt/PhD-QMATH


text:
@inproceedings{sitaram2014simple,
  title={Simple Cloud Federation},
  author={Sitaram, Dinkar and Phalachandra, HL and Harwalkar, Sudheendra and Murugesan, Sirushti and Sudheendra, Pavan and Ananth, Rohith and Vidhisha, B and Kanji, Abdul Hannan and Bhat, Swati Chidambar and Kruti, B},
  booktitle={Modelling Symposium (AMS), 2014 8th Asia},
  pages={83--89},
  year={2014},
  organization={IEEE}
}

license: MIT

repository: vidhishanair/academic-kickstart

license_type: permissive

repo_name: vidhishanair/academic-kickstart

branch_name: refs/heads/master

extension: bib


text:
SUMMARY = "Preware is a webOS on-device homebrew installer."
SECTION = "webos/apps"
LICENSE = "GPLv2+"
LIC_FILES_CHKSUM = "file://LICENSE;md5=eb723b61539feef013de476e68b5c50a"

inherit webos_public_repo
inherit webos_arch_indep
inherit webos_enyojs_application

PV = "2.0.2+gitr${SRCPV}"

SRCREV = "8c832c1495bfab1293d1c458aacdfe898adeb178"
SRC_URI = "git://github.com/webOS-ports/preware;protocol=git;branch=master"
S = "${WORKDIR}/git"

repository: nizovn/meta-webos-ports

repo_name: nizovn/meta-webos-ports

extension: bb


text:
.mainContainer {
    display: flex;
    flex-direction: column;
    justify-content: center;
    align-items: center;
}

.mainContainer > div {
    width: 450px;
}

header {
    position: sticky;
    top: 0;
    background-color: var(--background);
    border-bottom: 1px solid var(--border);
}

header h1 {
    font-size: 46px;
    color: var(--strong-text);
    font-weight: 500;
    margin-bottom: 20px;
}

.filteredVehicles {
    margin-top: 30px;
    display: flex;
    flex-direction: column;
    gap: 20px;
}

branch_name: refs/heads/main

extension: css


text:
DESCRIPTION = "Reset Radio Module service"
LICENSE = "MIT"
LIC_FILES_CHKSUM = "file://${COMMON_LICENSE_DIR}/MIT;md5=0835ade698e0bcf8506ecda2f7b4f302"

PV = "1.1"

PR = "r0"

SRC_URI = "\
    file://reset-rm.c \
    file://reset-rm.service \
    file://reset-rm.cfg \
"

S = "${WORKDIR}/"

DEPENDS += " \
    libcyaml \
    libgpiod \
"

RDEPENDS:${PN} += " \
    libcyaml \
    libgpiod \
"

do_compile() {
    ${CC} ${CFLAGS} ${LDFLAGS} ${WORKDIR}/reset-rm.c -lcyaml -lyaml -lgpiod -o reset-rm -Wall -Wextra -Wpedantic -Werror
}

do_install() {
    install -d ${D}${bindir}
    install -m 755 ${WORKDIR}/reset-rm ${D}${bindir}/

    install -d ${D}${systemd_unitdir}/system
    install -m 0644 ${WORKDIR}/reset-rm.service ${D}${systemd_unitdir}/system

    install -d ${D}${sysconfdir}
    install -m 0644 ${WORKDIR}/reset-rm.cfg ${D}${sysconfdir}/reset-rm.cfg
}

inherit systemd
SYSTEMD_PACKAGES = "${PN}"
SYSTEMD_SERVICE:${PN} = "reset-rm.service"


text:
@book{weidmann,
   title =     {Einführung in das mathematische Arbeiten},
   author =    {Schichl, Hermann and Steinbauer, Roland},
   publisher = {Springer Verlag Berlin-Heidelberg},
   year =      {2009}
 },

repository: jonaskoeppl/brueckenkurs

repo_name: jonaskoeppl/brueckenkurs


text:
body {
  background-image: linear-gradient(90deg, #8a2387, #e94057, #f27121);
  width: auto;
  margin: auto;
}

nav {
  margin: auto;
  height: 3em;
  display: flex;
  background-color: white;
}

nav img {
  margin-left: 1em;
}

ul {
  margin: auto;
  display: flex;
  list-style: none;
}

li {
  padding-left: 4em;
  cursor: pointer;
}

li a:hover {
  border: solid black;
  border-top: 2px;
  border-left: 2px;
  border-right: 2px;
  padding-bottom: 0.5vmin;
}

.selfbox {
  width: 75%;
  margin: 0 auto;
}

#avatarbox {
  margin: auto;
  display: flex;
  justify-content: space-around;
}

#avatarbox img {
  width: 20vmin;
  height: 20vmin;
  border-radius: 50%;
}

.profilebox,
.about {
  height: fit-content;
  background-color: white;
  margin-top: 5vmin;
  padding: 3vmin;
  border-radius: 12px;
  border: 2px solid black;
  box-shadow: 5px 5px rgba(0, 0, 0, 0.534);
}

.detailbox,
.aboutbox {
  text-align: center;
}

.detailbox .name {
  font-size: 1.5em;
}

.detailbox .bio {
  font-size: 3vmin;
}

.sociallogo img {
  width: 50%;
  margin: 0 auto;
}

.sociallogo img:hover {
  box-shadow: 3px 3px 5px 5px rgb(68, 63, 63);
  border-radius: 12px;
  border: 2px solid black;
  width: 50.3%;
  cursor: pointer;
}

.socialbox {
  display: flex;
  justify-content: space-around;
}

.links {
  width: 75%;
  margin: 0 auto;
  margin-top: 4vmin;
}

.linkbox {
  background-color: #63a4ff;
  background-image: linear-gradient(315deg, #63a4ff 0%, #83eaf1 74%);
  height: fit-content;
  margin-top: 5vmin;
  border-radius: 12px;
  border: 1px solid black;
  box-shadow: 5px 5px #63a4ffab;
  display: flex;
}

.linklogo img {
  width: 5vmin;
  padding: 3vmin;
}

.linklogo {
  width: 15%;
}

.linkname {
  width: 70%;
  font-size: 4vmin;
  padding: 3vmin;
  text-align: center;
  display: flex;
  justify-content: space-around;
}

.linkview {
  width: 20%;
  margin: auto;
}

.linkview button {
  background-color: white;
  padding: 1vmin;
  font-size: 4vmin;
  border-radius: 10px;
  border: 1px solid black;
}

.linkview button:hover {
  font-size: 4.5vmin;
  cursor: pointer;
  box-shadow: 3px 3px black;
}

.foot {
  background-color: white;
  display: flex;
  justify-content: space-around;
  margin-top: 5vmin;
}

@media only screen and (max-width: 900px) {
  #avatarbox img {
    width: 30vw;
    height: 30vw;
    border-radius: 50%;
  }

  .sociallogo img {
    width: 100%;
  }

  .sociallogo img:hover {
    box-shadow: 3px 3px 5px 5px rgb(68, 63, 63);
    border-radius: 12px;
    border: 2px solid black;
    width: 100.3%;
    cursor: pointer;
  }

  li {
    padding-left: 1em;
  }

  li a:hover {
    border: solid black;
    border-top: 2px;
    border-left: 2px;
    border-right: 2px;
    padding-bottom: 0.5vmin;
  }
}

.details {
  width: 75%;
  margin: 0 auto;
}

.details img {
  width: 100%;
  border: 1px solid black;
  border-radius: 12px;
}

.socialbox {
  display: flex;
  justify-content: space-around;
}

.sociallogo {
  width: fit-content;
  display: flex;
}

a {
  color: black;
  text-decoration: none;
}


text:
@article{SmithEtAl2018,
        author = {Jamie Karl Smith and Phil Roberts and Alexandros Kountouriotis and David Richardson an
d Pavlos Aleiferis and Daniel Ruprecht},
        title ={Thermodynamic modelling of a stratified charge spark ignition engine},
        journal = {International Journal of Engine Research},
        year = {2018},
        doi = {10.1177/1468087418784845},
        URL = {https://doi.org/10.1177/1468087418784845},
}

repository: comp-maths/website

repo_name: comp-maths/website


text:
file(REMOVE_RECURSE
  "CMakeFiles/example-command-with-opts.dir/examples/example-command-with-opts.c.o"
  "example-command-with-opts"
  "example-command-with-opts.pdb"
)

# Per-language clean rules from dependency scanning.
foreach(lang C)
  include(CMakeFiles/example-command-with-opts.dir/cmake_clean_${lang}.cmake OPTIONAL)
endforeach()

repository: JohnAD/decimal-benchmark

repo_name: JohnAD/decimal-benchmark

extension: cmake


text:
@article{CMOSAnalogMAP_winstead_2004,
 abstract = {Design and test results for a fully integrated translinear tail-biting MAP error-control decoder are presented. Decoder designs have been reported for various applications which make use of analog computation, mostly for Viterbi-style decoders. MAP decoders are more complex, and are necessary components of powerful iterative decoding systems such as turbo codes. Analog circuits may require less area and power than digital implementations in high-speed iterative applications. Our (8, 4) Hamming decoder, implemented in an AMI 0.5-/spl mu/m process, is the first functioning CMOS analog MAP decoder. While designed to operate in subthreshold, the decoder also functions above threshold with a small performance penalty. The chip has been tested at bit rates up to 2 Mb/s, and simulations indicate a top speed of about 10 Mb/s in strong inversion. The decoder circuit size is 0.82 mm/sup 2/, and typical power consumption is 1 mW at 1 Mb/s.},
 annotation = {00000},
 author = {Winstead, C. and Jie Dai and Shuhuan Yu and Myers, C. and Harrison, R.R. and Schlegel, C.},
 doi = {10.1109/JSSC.2003.820845},
 issn = {1558-173X},
 journal = {IEEE Journal of Solid-State Circuits},
 keywords = {(8;4) Hamming code,0.5 micron,1 mW,10 Mbit/s,2 Mbit/s,Ambient intelligence,AMI 0.5/spl mu/m process,analog circuits,Analog circuits,analog computation,Analog computers,Bit rate,Circuit simulation,Circuit testing,CMOS analog MAP decoder,CMOS analog MAP decoders,CMOS analogue integrated circuits,CMOS process,decoder circuit,decoder designs,Energy consumption,Hamming codes,high speed iterative applications,high-speed integrated circuits,iterative decoding,Iterative decoding,iterative decoding systems,maximum a posteriori decoding,strong inversion,translinear tail-biting MAP error-control decoder,turbo codes,Turbo codes,Viterbi decoding,Viterbi-style decoders},
 month = {January},
 number = {1},
 pages = {122--131},
 title = {CMOS Analog MAP Decoder for (8,4) Hamming Code},
 volume = {39},
 year = {2004}
}


text:
require pango.inc
PR = "r2"

SRC_URI[archive.md5sum] = "37a185a3cb5c1a39ade7fdc3e6c75349"
SRC_URI[archive.sha256sum] = "75fa65f965c8b9b80b1a0a270ad5dfbe71eaa980451790a0c86fdd19f55cd150"


text:
# CMake generated Testfile for
# Source directory: C:/Users/luoyuchu/Desktop/Currrent_Semester/CompilerProject-2020Spring/3rdparty/jsoncpp/src/test_lib_json
# Build directory: C:/Users/luoyuchu/Desktop/Currrent_Semester/CompilerProject-2020Spring/cmake-build-debug/jsoncpp-build/src/test_lib_json
#
# This file includes the relevant testing commands required for
# testing this directory and lists subdirectories to be tested as well.
add_test(jsoncpp_test "C:/Users/luoyuchu/Desktop/Currrent_Semester/CompilerProject-2020Spring/cmake-build-debug/bin/jsoncpp_test.exe")
set_tests_properties(jsoncpp_test PROPERTIES  _BACKTRACE_TRIPLES "C:/Users/luoyuchu/Desktop/Currrent_Semester/CompilerProject-2020Spring/3rdparty/jsoncpp/src/test_lib_json/CMakeLists.txt;25;add_test;C:/Users/luoyuchu/Desktop/Currrent_Semester/CompilerProject-2020Spring/3rdparty/jsoncpp/src/test_lib_json/CMakeLists.txt;0;")

repository: natianxing/CompilerProject

repo_name: natianxing/CompilerProject


text:
# This describes a generic SlugOS image, even though the bb file is
# called 'slugos-image.bb' the distro specific configuration is
# done in conf/distro/${DISTRO}.conf (which should always include
# conf/distro/slugos.conf to get the standard settings).
#
DESCRIPTION = "Generic SlugOS image"
MAINTAINER = "NSLU2 Linux <nslu2-linux@yahoogroups.com>"
HOMEPAGE = "http://www.nslu2-linux.org"
LICENSE = "MIT"
PR = "r25"

# SLUGOS_IMAGENAME defines the name of the image to be build, if it
# is not set this package will be skipped!
IMAGE_BASENAME = "${SLUGOS_IMAGENAME}"
IMAGE_FSTYPES = "jffs2"
EXTRA_IMAGECMD_jffs2 = "--pad --${SLUGOS_IMAGESEX} --eraseblock=0x20000 -D ${SLUGOS_DEVICE_TABLE}"
IMAGE_LINGUAS = ""

# Setting USE_DEVFS prevents *any* entries being created initially
# in /dev
USE_DEVFS = "1"

# This is passed to the image command to build the correct /dev
# directory (because only the image program can make actual
# dev entries!)
SLUGOS_DEVICE_TABLE = "${@bb.which(bb.data.getVar('BBPATH', d, 1), 'files/device_table-slugos.txt')}"

# IMAGE_PREPROCESS_COMMAND is run before making the image.  In SlugOS the
# kernel image is removed from the root file system to recover the space used -
# SlugOS is assumed to boot from a separate kernel image in flash (not in the
# root file system), if this is not the case the following must not be done!
IMAGE_PREPROCESS_COMMAND += "rm ${IMAGE_ROOTFS}/boot/zImage*;"
IMAGE_PREPROCESS_COMMAND += "install -c -m 644 ${SLUGOS_DEVICE_TABLE} ${IMAGE_ROOTFS}/etc/device_table;"

# Building a full image.  If required do a post-process command which builds
# the full flash image using slugimage.  At present this only works for NSLU2 images.
PACK_IMAGE = ""
IMAGE_POSTPROCESS_COMMAND += "${PACK_IMAGE}"
PACK_IMAGE_DEPENDS = ""
EXTRA_IMAGEDEPENDS += "${PACK_IMAGE_DEPENDS}"

# This hack removes '${MACHINE}' from the end of the arch.conf for ipk,
# preventing _mach.ipk (with no byte sex) taking precedence over everything
# else.
ROOTFS_POSTPROCESS_COMMAND += "sed -i '$d' '${IMAGE_ROOTFS}/etc/ipkg/arch.conf';"

# These depends define native utilities - they do not get put in the flash and
# are not required to build the image.
IMAGE_TOOLS = ""
EXTRA_IMAGEDEPENDS += "${IMAGE_TOOLS}"

# CONFIG:
# SLUGOS_EXTRA_RDEPENDS: set in conf, things to add to the image
# SLUGOS_SUPPORT:        set to here, see below, added to the image.
# SLUGOS_KERNEL:         set here, kernel modules added to the image
#
# Do not override the last two unless you really know what you
# are doing - there is more information below.

# diff, cpio and find are required for reflash and turnup ram.
# Removing these probably leaves the system bootable, but standard
# openslug and ucslugc stuff won't work, so only take these out in
# very non-standard turnkey slugos builds.
#
# udev is the default way of handling devices, there is no guarantee
# that the static device table is completely correct (it is just
# known to be sufficient for boot.)
SLUGOS_SUPPORT ?= "diffutils cpio findutils udev"

# kernel-module-af-packet must be in the image for DHCP to work
# kernel-module-netconsole is here because it is small and is
# highly useful on minimal systems (which really don't have anywhere
# other than the network to output error messages!)
SLUGOS_KERNEL ?= "kernel-module-af-packet kernel-module-netconsole"

RDEPENDS = "kernel ixp-eth \
	base-files base-passwd netbase \
        busybox hotplug-ng initscripts-slugos slugos-init \
        update-modules sysvinit tinylogin \
	module-init-tools modutils-initscripts \
        ipkg-collateral ipkg ipkg-link \
	portmap \
	dropbear \
	beep \
	e2fsprogs-blkid \
	util-linux-mount \
	util-linux-umount \
	util-linux-swaponoff \
	util-linux-losetup \
	${SLUGOS_SUPPORT} \
	${SLUGOS_KERNEL} \
	${SLUGOS_EXTRA_RDEPENDS}"

IPKG_INSTALL = "${RDEPENDS}"

inherit image_ipk

python () {
	# Don't build slugos images unless the configuration is set up
	# for an image build!
	if bb.data.getVar("SLUGOS_IMAGENAME", d, 1) == '' or bb.data.getVar("SLUGOS_IMAGESEX", d, 1) == '':
		raise bb.parse.SkipPackage("absent or broken SlugOS configuration")
}

#--------------------------------------------------------------------------------
# NSLU2 specific
#
#NOTE: you do not actually need the boot loader in normal use because it is
# *not* overwritten by a standard upslug upgrade, so you can make an image with
# just non-LinkSys software which can be flashed into the NSLU2.  Because
# LinkSys have made "EraseAll" available, however, (this does overwrite RedBoot)
# it is a bad idea to produce flash images without a valid RedBoot - that allows
# an innocent user upgrade attempt to instantly brick the NSLU2.
PACK_IMAGE_nslu2 = "nslu2_pack_image;"
PACK_IMAGE_DEPENDS_nslu2 = "${@['', 'slugimage-native nslu2-linksys-firmware'][bb.data.getVar('SLUGOS_FLASH_IMAGE', d, 1) == 'yes']}"

NSLU2_SLUGIMAGE_ARGS ?= ""

nslu2_pack_image() {
	if test '${SLUGOS_FLASH_IMAGE}' = yes
	then
		install -d ${DEPLOY_DIR_IMAGE}/slug
		install -m 0644 ${STAGING_LIBDIR}/nslu2-binaries/RedBoot \
				${STAGING_LIBDIR}/nslu2-binaries/Trailer \
				${STAGING_LIBDIR}/nslu2-binaries/SysConf \
				${DEPLOY_DIR_IMAGE}/slug/
		install -m 0644 ${DEPLOY_DIR_IMAGE}/zImage-nslu2${ARCH_BYTE_SEX} \
			${DEPLOY_DIR_IMAGE}/slug/vmlinuz
		install -m 0644 ${DEPLOY_DIR_IMAGE}/${IMAGE_NAME}.rootfs.jffs2 \
			${DEPLOY_DIR_IMAGE}/slug/flashdisk.jffs2
		cd ${DEPLOY_DIR_IMAGE}/slug
		slugimage -p -b RedBoot -s SysConf -r Ramdisk:1,Flashdisk:flashdisk.jffs2 -t \
			Trailer -o ${DEPLOY_DIR_IMAGE}/${IMAGE_NAME}.flashdisk.img \
			${NSLU2_SLUGIMAGE_ARGS}
		rm -rf ${DEPLOY_DIR_IMAGE}/slug
	fi
}

# upslug2 (in tmp/work/upslug2-native-*) is the program to write the NSLU2 flash
IMAGE_TOOLS_nslu2 = "upslug2-native"

repository: BackupTheBerlios/openslug-svn

repo_name: BackupTheBerlios/openslug-svn


text:
@article{PMID:29912866,
 author = {Harris KD and Hochgerner H and Skene NG and Magno L and Katona L and Bengtsson Gonzales C and Somogyi P and Kessaris N and Linnarsson S and Hjerling-Leffler J},
 doi = {10.1371/journal.pbio.2006387},
 journal = {PLoS biology},
 month = {06},
 title = {Classes and continua of hippocampal CA1 inhibitory neurons revealed by single-cell transcriptomics.},
 year = {2018}
}

repository: SarahMarzi/neurogenomics-lab-website

repo_name: SarahMarzi/neurogenomics-lab-website


text:
@inproceedings{dubach12compiling,
 author = {Dubach, Christophe and Cheng, Perry and Rabbah, Rodric and Bacon, David and Fink, Stephen},
 booktitle = {Proceedings of the 33rd ACM SIGPLAN Symposium on Programming Language Design and Implementation},
 corerank = {A*},
 keywords = {reviewed},
 note = {19% acceptance rate (48/255), HiPEAC Paper Award},
 series = {PLDI},
 title = {Compiling a High-Level Language for GPUs (via Language Support for Architectures and Compilers)},
 url = {papers/dubach12pldi.pdf},
 year = {2012}
}

repository: cdubach/academic-kickstart

repo_name: cdubach/academic-kickstart


text:
@article{2007ApJ...668..667T,
 abstract = {We examine the abundance of molecular hydrogen (H$_2$) in the spectra
of gamma ray burst afterglows (GRBs). In nearby galaxies, H$_2
$ traces the cold neutral medium (CNM) and dense molecular
star-forming interstellar gas. Although H$_2$ is detected in
at least half of all sight lines toward hot stars in the
Magellanic Clouds and in åisebox-0.5ex~25% of
damped Ly\ensuremathα systems toward quasars, it is not
detected in any of the five GRB environments with a similar
range of neutral hydrogen column density and metallicity. We
detect no vibrationally excited H$_2$ that would imply that
the GRB itself has photodissociated its parent molecular cloud,
so such models are ruled out unless the parent cloud was
<\i̊sebox-0.5ex~4 pc in radius and was
fully dissociated prior to the spectroscopic observations, or
the star escaped its parent cloud during its main-sequence
lifetime. The low molecular fractions for the GRBs are
mysterious in light of their large column densities of neutral H
and expectations based on local analogs, i.e., 30 Doradus in the
LMC. This surprising lack of H$_2$ in GRB damped
Ly\ensuremathα absorbers indicates that the destruction
processes that suppress molecule formation in the LMC and SMC
are more effective in the GRB hosts, most probably due to a
combination of low metallicity and an FUV radiation field 10-100
times the Galactic mean field. These inferred conditions place
strong constraints on the star-forming regions in these early
galaxies.},
 adsnote = {Provided by the SAO/NASA Astrophysics Data System},
 adsurl = {https://ui.adsabs.harvard.edu/abs/2007ApJ...668..667T},
 archiveprefix = {arXiv},
 author = {Tumlinson, Jason and Prochaska, Jason X. and Chen, Hsiao-Wen and
Dessauges-Zavadsky, Miroslava and Bloom, Joshua S.},
 doi = {10.1086/521294},
 eprint = {astro-ph/0703666},
 journal = {\apj},
 keywords = {Gamma Rays: Bursts, ISM: Molecules, Astrophysics},
 month = {Oct},
 number = {2},
 pages = {667-673},
 primaryclass = {astro-ph},
 title = {Missing Molecular Hydrogen and the Physical Conditions of GRB Host Galaxies},
 volume = {668},
 year = {2007}
}

repository: profjsb/my-content

repo_name: profjsb/my-content

gha_license_id: MIT

gha_language: TeX


text:
# Copyright (C) 2014 O.S. Systems Software LTDA.

DESCRIPTION = "Target packages for Qt5 SDK"
LICENSE = "MIT"

PACKAGE_ARCH = "${TUNE_PKGARCH}"
inherit packagegroup

PACKAGEGROUP_DISABLE_COMPLEMENTARY = "1"

RDEPENDS_${PN} += " \
    packagegroup-core-standalone-sdk-target \
    libsqlite3-dev \
    qtbase-dev \
    qtbase-mkspecs \
    qtbase-plugins \
    qtbase-staticdev \
    qtbase-tools \
    qtserialport-dev \
    qtserialport-mkspecs \
    qtserialbus-dev \
    qtserialbus-mkspecs \
"
RDEPENDS_${PN}_remove_toolchain-clang_riscv32 = "qttools-dev qttools-mkspecs qttools-staticdev qttools-tools qttools-plugins"
RDEPENDS_${PN}_remove_toolchain-clang_riscv64 = "qttools-dev qttools-mkspecs qttools-staticdev qttools-tools qttools-plugins"

repository: IlyaKyznetsov/meta-ik

repo_name: IlyaKyznetsov/meta-ik


text:
@article{Kokulan-2021-Temporal,
    title = "Temporal variability in water and nutrient movement through vertisols into agricultural tile drains in the northern Great Plains",
    author = "Kokulan, V.  and
      Macrae, M.L.  and
      Ali, G.A.  and
      Lobb, D.A.  and
      Morison, M.  and
      Brooks, B.C.",
    journal = "Journal of Soil and Water Conservation",
    year = "2021",
    publisher = "Soil and Water Conservation Society",
    url = "https://aclanthology.org/G21-2001",
    doi = "10.2489/jswc.2021.00099",
    pages = "00099",
}

repository: gwf-uwaterloo/gwf-publications

repo_name: gwf-uwaterloo/gwf-publications

gha_language: Python


text:
% Encoding: UTF-8

@article{Rao:2014aa,
	Author = {Suhas~S.P. Rao and Miriam~H. Huntley and Neva~C. Durand and Elena~K. Stamenova and Ivan~D. Bochkov and James~T. Robinson and Adrian~L. Sanborn and Ido Machol and Arina~D. Omer and Eric~S. Lander and Erez~Lieberman Aiden},
	Doi = {10.1016/j.cell.2014.11.021},
	Journal = {Cell},
	Month = {dec},
	Number = {7},
	Pages = {1665--1680},
	Publisher = {Elsevier {BV}},
	Title = {A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping},
	Volume = {159},
	Year = {2014},
	Bdsk-Url-1 = {https://doi.org/10.1016/j.cell.2014.11.021}}

@article{Durand:2016aa,
	Author = {Neva C. Durand and Muhammad S. Shamim and Ido Machol and Suhas S.P. Rao and Miriam H. Huntley and Eric S. Lander and Erez Lieberman Aiden},
	Doi = {10.1016/j.cels.2016.07.002},
	Journal = {Cell Systems},
	Month = {jul},
	Number = {1},
	Pages = {95--98},
	Publisher = {Elsevier {BV}},
	Title = {Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments},
	Volume = {3},
	Year = {2016},
	Bdsk-Url-1 = {https://doi.org/10.1016/j.cels.2016.07.002}}

@Article{cresswell:2019aa,
  author    = {Kellen G Cresswell and John C Stansfield and Mikhail G Dozmorov},
  title     = {{SpectralTAD}: an R package for defining a hierarchy of Topologically Associated Domains using spectral clustering},
  year      = {2019},
  month     = {feb},
  doi       = {10.1101/549170},
  publisher = {Cold Spring Harbor Laboratory},
}

@Comment{jabref-meta: databaseType:bibtex;}

repository: dozmorovlab/SpectralTAD

repo_name: dozmorovlab/SpectralTAD

gha_license_id: NOASSERTION

gha_language: R


text:
.letters {
	display: flex;
	align-items: center;
	position: relative;
	font-size: 16rem;
	color: white;
}


text:
@article{Sillmann-2017-Understanding,,
    title = "Understanding, modeling and predicting weather and climate extremes: Challenges and opportunities",
    author = "Sillmann, Jana  and
      Thorarinsdottir, Thordis  and
      Keenlyside, Noel  and
      Schaller, Nathalie  and
      Alexander, Lisa V.  and
      Hegerl, Gabriele  and
      Seneviratne, Sonia I.  and
      Vautard, Robert  and
      Zhang, Xuebin  and
      Zwiers, Francis W.",
    journal = "Weather and Climate Extremes, Volume 18",
    volume = "18",
    year = "2017",
    publisher = "Elsevier BV",
    url = "https://aclanthology.org/G17-34001",
    doi = "10.1016/j.wace.2017.10.003",
    pages = "65--74",
    abstract = "Weather and climate extremes are identified as major areas necessitating further progress in climate research and have thus been selected as one of the World Climate Research Programme (WCRP) Grand Challenges. Here, we provide an overview of current challenges and opportunities for scientific progress and cross-community collaboration on the topic of understanding, modeling and predicting extreme events based on an expert workshop organized as part of the implementation of the WCRP Grand Challenge on Weather and Climate Extremes. In general, the development of an extreme event depends on a favorable initial state, the presence of large-scale drivers, and positive local feedbacks, as well as stochastic processes. We, therefore, elaborate on the scientific challenges related to large-scale drivers and local-to-regional feedback processes leading to extreme events. A better understanding of the drivers and processes will improve the prediction of extremes and will support process-based evaluation of the representation of weather and climate extremes in climate model simulations. Further, we discuss how to address these challenges by focusing on short-duration (less than three days) and long-duration (weeks to months) extreme events, their underlying mechanisms and approaches for their evaluation and prediction.",
}


text:
.tweet-wall > .chart-stage {
  max-width: 100%;
}

blockquote.twitter-tweet {
  padding: 0.8em;
  margin: 0.5em;
  border-radius: 1em;
  border-left: none;
  box-shadow: 0 1px 3px rgba(0, 0, 0, 0.15);
}

.twitter-tweet {
  margin-bottom: 0 !important;
}

/* The Masonry Brick */
.tweet-wall > .chart-stage > .twitter-tweet {
  max-width: 500px;
  margin: auto;
}

/* Masonry on large screens */
@media only screen and (min-width: 1024px) {
  .tweet-wall > .chart-stage {
    column-count: 4;
  }
}

/* Masonry on medium-sized screens */
@media only screen and (max-width: 1023px) and (min-width: 768px) {
  .tweet-wall > .chart-stage {
    column-count: 3;
  }
}

/* Masonry on small screens */
@media only screen and (max-width: 767px) and (min-width: 540px) {
  .tweet-wall > .chart-stage {
    column-count: 2;
  }
}

repository: r-community/central

repo_name: r-community/central

gha_language: HTML


text:
RDEPENDS_${PN} = "apt apt-opkg dpkg"
RRECOMMENDS_${PN} = "apt-transport-https"

require packagegroup-pkg.inc

PKGTYPE = "deb"

repository: opendreambox/opendreambox

repo_name: opendreambox/opendreambox

branch_name: refs/heads/pyro

gha_language: BitBake


text:
body{
	margin:0;
	padding:0;
}
#container{
	margin: 0;
	padding: 0;
}
#content{
	margin: 0 20px ;
	position : fixed;
  top:0;
  left:0;
  bottom:0;
}
#login_content{
	width: 382px;
	margin: 0 20px ;

}
#last_table{
  position :fixed;
  top: 0;
  right:0;
	bottom: 0;
  left:420px;
	margin: 0 0 0 15px;
	overflow-y: scroll;
}
#sum_table{
	margin-top:10px;
}
#sum_table table, #sum_table td, #sum_table th {
    border: solid 1px;
}
.modify{
	bottom: 10px;
}
.center {
	width: 410px;
	margin: auto;
	overflow-y: scroll;
}
.login {
	width: 410px;
	margin: auto;
}
.last_moves{
	margin-top:5px;
	font-size:20px;
}
.last_moves td{
	border: solid 1px;
	text-align:center;
}
.mode{
	width: 250px;
}
.category{
	width: 250px
}
.in{
	background-color: #B0FFBE;
}
.out{
	background-color: #FFBEB0;
}
.search_bar{
	width: 600px;
	margin: auto;
	margin-top: 20%;
}
input[type=number]::-webkit-inner-spin-button,
input[type=number]::-webkit-outer-spin-button {
    -webkit-appearance: none;
    -moz-appearance: none;
    appearance: none;
    margin: 0;
}
.button{
	width:32%;
	margin-top:5px
}
@media only screen and (max-width: 699px) {
	#login_content{
		width: 95%;
	}
}


text:
.searchbox {
  /*definint width of form element*/

  width: 80%;
  margin: auto;
  padding-top: 50px;

  /*centering the form element*/
}

.result .searchbox{
  padding-top: 20px;
  -webkit-transition: all 1s ease;
  -moz-transition: all 1s ease;
  -o-transition: all 1s ease;
  transition: all 1s ease;
}

::-webkit-input-placeholder { font-family:'Roboto'; font-weight: 100; color:#DADFE1; }
::-moz-placeholder { font-family:'Roboto'; font-weight: 100; color:#DADFE1; } /* firefox 19+ */
:-ms-input-placeholder { font-family:'Roboto'; font-weight: 100; color:#DADFE1; } /* ie */
input:-moz-placeholder { font-family:'Roboto'; font-weight: 100; color:#DADFE1; }

input[type="search"] {
  padding-top: 10px;
  padding-bottom: 10px;
  padding-left: 10px;
  font-size: 36px;
  width: 100%;
  color: #91938F;
  background:transparent;
  /*removing boder from search box*/

  border: none;
  /*defining background image as a search symbol*/

  border-bottom: 1px solid #4873A9;

}

input[type="search"]:focus {
    border:1px solid #4873A9;
}

/*now using placeholder property to change color of placholder text and making it consitent accross the browser by use of prefix*/

input[type="search"]::-webkit-input-placeholder {
  color: #C7BDB7;
}

input[type="search"]:-moz-placeholder {
  /* Firefox 18- */

  color: #C7BDB7;
}

input[type="search"]::-moz-placeholder {
  /* Firefox 19+ */

  color: #C7BDB7;
}

input[type="search"]:-ms-input-placeholder {
  /* interner explorer*/

  color: #C7BDB7;
}

.searchbox a {
  display: block;
  /*removing underlines from anchor element*/

  text-decoration: none;
  color: white;
  font-size: 30px;
  background-color: #4873A9;
  padding: 10px;
}

.searchbox ul {
  /*removing predefined bullet points from list*/

  list-style: none;
  /*removing padding from list items*/

  padding: 0;
  width: 100%;
}

.searchbox ul li {
  margin-bottom: 10px;
}
/*adding effect when the mouse is hovered over list item*/

.searchbox ul li a:hover {
  color: white;
  background: #799DCD;
}
/*moving it slightly toware right when hovered*/

.searchbox ul li:hover {
  /*transform*/

  -webkit-transform: translateX(20px);
  -moz-transform: translateX(20px);
  -ms-transform: translateX(20px);
  -o-transform: translateX(20px);
  transform: translateX(20px);
}
/*now first we will hide the suggestion list*/

.suggestions li, .suggestions h4 {
  overflow: hidden;
  height: 0;
  -webkit-transition: all 0.3s ease-in-out;
  -moz-transition: all 0.3s ease-in-out;
  -o-transition: all 0.3s ease-in-out;
  transition: all 0.3s ease-in-out;
}
/*and make the suggestion reappear when user focus on search field*/

input[type="search"]:focus + .suggestions li{
  height: 63px;
}

input[type="search"]:focus + .suggestions h4{
  margin-top: 40px;
  height: 20px;
}

.result .suggestions {
  display: none;
}

.byline {
  text-align: center;
  font-size: 18px;
}

.byline a {
  text-decoration: none;
  color: #1f5350;
}

repository: bumper-app/bumper-website

repo_name: bumper-app/bumper-website


text:
@article{Pisek-2018-Data,
    title = "Data synergy between leaf area index and clumping index Earth Observation products using photon recollision probability theory",
    author = "Pisek, Jan  and
      Buddenbaum, Henning  and
      Camacho, Fernando  and
      Hill, Joachim  and
      Jensen, Jennifer L.R.  and
      Lange, Holger  and
      Liu, Zhili  and
      Piayda, Arndt  and
      Qu, Yonghua  and
      Roupsard, Olivier  and
      Serbin, Shawn P.  and
      Solberg, Svein  and
      Sonnentag, Oliver  and
      Thimonier, Anne  and
      Vuolo, Francesco",
    journal = "Remote Sensing of Environment, Volume 215",
    volume = "215",
    year = "2018",
    publisher = "Elsevier BV",
    url = "https://aclanthology.org/G18-59002",
    doi = "10.1016/j.rse.2018.05.026",
    pages = "1--6",
    abstract = "Abstract Clumping index (CI) is a measure of foliage aggregation relative to a random distribution of leaves in space. The CI can help with estimating fractions of sunlit and shaded leaves for a given leaf area index (LAI) value. Both the CI and LAI can be obtained from global Earth Observation data from sensors such as the Moderate Resolution Imaging Spectrometer (MODIS). Here, the synergy between a MODIS-based CI and a MODIS LAI product is examined using the theory of spectral invariants, also referred to as photon recollision probability ({`}p-theory{'}), along with raw LAI-2000/2200 Plant Canopy Analyzer data from 75 sites distributed across a range of plant functional types. The p-theory describes the probability (p-value) that a photon, having intercepted an element in the canopy, will recollide with another canopy element rather than escape the canopy. We show that empirically-based CI maps can be integrated with the MODIS LAI product. Our results indicate that it is feasible to derive approximate p-values for any location solely from Earth Observation data. This approximation is relevant for future applications of the photon recollision probability concept for global and local monitoring of vegetation using Earth Observation data.",
}


text:
Automatically generated by Mendeley Desktop 1.13.3
Any changes to this file will be lost if it is regenerated by Mendeley.

BibTeX export options can be customized via Options -> BibTeX in Mendeley Desktop

@inproceedings{Ferguson2005,
author = {Ferguson, Dave and Stentz, Anthony},
booktitle = {International Symposium on Robotics Research},
file = {:home/fduvalle/proj/mendeley/papers/Ferguson, Stentz - 2005 - Field D An interpolation-based path planner and replanner.pdf:pdf},
title = {{Field D*: An interpolation-based path planner and replanner}},
year = {2005}
}
@article{Rosenthal2011,
author = {Rosenthal, Stephanie and Veloso, Manuela and Dey, Anind K.},
file = {:home/fduvalle/proj/mendeley/papers/Rosenthal, Veloso, Dey - 2011 - Is Someone in this Office Available to Help Me.pdf:pdf},
journal = {Journal of Intelligent \& Robotic Systems},
keywords = {2010,asking for help,human,mathematics subject classifications,planning,robot interaction,user study},
number = {1-2},
pages = {205--221},
title = {{Is Someone in this Office Available to Help Me?}},
volume = {66},
year = {2011}
}
@article{Ferguson2006,
author = {Ferguson, David and Stentz, Anthony},
file = {:home/fduvalle/proj/mendeley/papers/Ferguson, Stentz - 2006 - Using interpolation to improve path planning The Field D algorithm.pdf:pdf},
journal = {Journal of Field Robotics},
title = {{Using interpolation to improve path planning: The Field D* algorithm}},
year = {2006}
}
@inproceedings{Biswas2010,
author = {Biswas, Joydeep and Veloso, Manuela},
booktitle = {International Conference on Robotics and Automation},
file = {:home/fduvalle/proj/mendeley/papers/Biswas, Veloso - 2010 - WiFi localization and navigation for autonomous indoor mobile robots.pdf:pdf},
title = {{WiFi localization and navigation for autonomous indoor mobile robots}},
year = {2010}
}
@article{Fischler1981,
author = {Fischler, Martin A and Bolles, Robert C},
file = {:home/fduvalle/proj/mendeley/papers/Fischler, Bolles - 1981 - Random sample consensus a paradigm for model fitting with applications to image analysis and automated cartogr.pdf:pdf},
journal = {Communications of the ACM},
title = {{Random sample consensus: a paradigm for model fitting with applications to image analysis and automated cartography}},
year = {1981}
}
@inproceedings{Yamauchi1998,
author = {Yamauchi, Brian},
booktitle = {International Conference on Autonomous Agents},
file = {:home/fduvalle/proj/mendeley/papers/Yamauchi - 1998 - Frontier-Based Exploration Using Multiple Robots.pdf:pdf},
title = {{Frontier-Based Exploration Using Multiple Robots}},
year = {1998}
}
@inproceedings{Rusu2011,
author = {Rusu, Radu Bogdan and Cousins, Steve},
booktitle = {International Conference on Robotics and Automation},
file = {:home/fduvalle/proj/mendeley/papers/Rusu, Cousins - 2011 - 3D is here Point Cloud Library (PCL).pdf:pdf},
title = {{3D is here: Point Cloud Library (PCL)}},
year = {2011}
}
@inproceedings{Coltin2011,
author = {Coltin, Brian and Biswas, Joydeep and Pomerleau, Dean and Veloso, Manuela},
booktitle = {Proceedings of the RoboCup Symposium},
file = {:home/fduvalle/proj/mendeley/papers/Coltin et al. - 2011 - Effective Semi-autonomous Telepresence.pdf:pdf},
keywords = {mobile robots,telepresence},
title = {{Effective Semi-autonomous Telepresence}},
year = {2011}
}
@inproceedings{Rosenthal2010,
author = {Rosenthal, Stephanie and Biswas, Joydeep and Veloso, Manuela},
booktitle = {Autonomous Agents and Multi-Agent Systems},
file = {:home/fduvalle/proj/mendeley/papers/Rosenthal, Biswas, Veloso - 2010 - An effective personal mobile robot agent through symbiotic human-robot interaction.pdf:pdf},
keywords = {agent interaction,human-robot},
title = {{An effective personal mobile robot agent through symbiotic human-robot interaction}},
year = {2010}
}
@inproceedings{Dean2013,
author = {Dean, Robert},
booktitle = {Proc. of SPIE},
title = {{Common world model for unmanned systems}},
year = {2013}
}
@article{Biswas2013,
author = {Biswas, Joydeep and Veloso, Manuela M},
file = {:home/fduvalle/proj/mendeley/papers/Biswas, Veloso - 2013 - Localization and Navigation of the CoBots Over Long-term Deployments.pdf:pdf},
journal = {The International Journal of Robotics Research},
title = {{Localization and Navigation of the CoBots Over Long-term Deployments}},
year = {2013}
}
@phdthesis{Biswas2014,
author = {Biswas, Joydeep},
file = {:home/fduvalle/proj/mendeley/papers/Biswas - 2014 - Vector Map-Based, Non-Markov Localization for Long-Term Deployment of Autonomous Mobile Robots.pdf:pdf},
number = {December},
school = {Carnegie Mellon University},
title = {{Vector Map-Based, Non-Markov Localization for Long-Term Deployment of Autonomous Mobile Robots}},
year = {2014}
}
@article{Anderson2004,
abstract = {Adaptive control of thought-rational (ACT-R; J. R. Anderson \& C. Lebiere, 1998) has evolved into a theory that consists of multiple modules but also explains how these modules are integrated to produce coherent cognition. The perceptual-motor modules, the goal module, and the declarative memory module are presented as examples of specialized systems in ACT-R. These modules are associated with distinct cortical regions. These modules place chunks in buffers where they can be detected by a production system that responds to patterns of information in the buffers. At any point in time, a single production rule is selected to respond to the current pattern. Subsymbolic processes serve to guide the selection of rules to fire as well as the internal operations of some modules. Much of learning involves tuning of these subsymbolic processes. A number of simple and complex empirical examples are described to illustrate how these modules function singly and in concert.},
author = {Anderson, John R and Bothell, Daniel and Byrne, Michael D and Douglass, Scott and Lebiere, Christian and Qin, Yulin},
file = {:home/fduvalle/proj/mendeley/papers/Anderson et al. - 2004 - An integrated theory of the mind.pdf:pdf},
journal = {Psychological review},
pmid = {15482072},
title = {{An integrated theory of the mind.}},
year = {2004}
}
@article{Doucet2000,
abstract = {In this article, we present an overview of methods for sequential simulation from posterior distributions. These methods are of particular interest in Bayesian filtering for discrete time dynamic models that are typically nonlinear and non-Gaussian. A general importance sampling framework is developed that unifies many of the methods which have been proposed over the last few decades in several different scientific disciplines. Novel extensions to the existing methods are also proposed. We show in particular how to incorporate local linearisation methods similar to those which have previously been employed in the deterministic filtering literature; these lead to very effective importance distributions. Furthermore we describe a method which uses Rao-Blackwellisation in order to take advantage of the analytic structure present in some important classes of state-space models. In a final section we develop algorithms for prediction, smoothing and evaluation of the likelihood in dynamic models.},
author = {Doucet, Arnaud and Godsill, Simon and Andrieu, Christophe},
file = {:home/fduvalle/proj/mendeley/papers/Doucet, Godsill, Andrieu - 2000 - On Sequential Monte Carlo Sampling Methods for Bayesian Filtering.pdf:pdf},
journal = {Statistics and Computing},
title = {{On Sequential Monte Carlo Sampling Methods for Bayesian Filtering}},
year = {2000}
}
@inproceedings{Veloso2012,
author = {Veloso, Manuela and Biswas, Joydeep and Coltin, Brian and Rosenthal, Stephanie and Brandao, Susana and Mericli, Tekin and Ventura, Rodrigo},
booktitle = {IROS Workshop on Cognitive Assistive Systems: Closing the Action-Perception Loop},
file = {:home/fduvalle/proj/mendeley/papers/Veloso et al. - 2012 - Symbiotic-Autonomous Service Robots for User-Requested Tasks in a Multi-Floor Building.pdf:pdf},
title = {{Symbiotic-Autonomous Service Robots for User-Requested Tasks in a Multi-Floor Building}},
year = {2012}
}
@inproceedings{Oh2015,
author = {Oh, Jean and Suppe, Arne and Duvallet, Felix and Boularias, Abdeslam and Vinokurov, Jerry and Navarro-Serment, Luis and Romero, Oscar and Dean, Robert and Lebiere, Christian and Hebert, Martial and Stentz, Anthony},
booktitle = {AAAI Conference on Artificial Intelligence},
file = {:home/fduvalle/proj/mendeley/papers/Oh et al. - 2015 - Toward Mobile Robots Reasoning Like Humans.pdf:pdf},
title = {{Toward Mobile Robots Reasoning Like Humans}},
year = {2015}
}
@inproceedings{Brunskill2007,
author = {Brunskill, Emma and Kollar, Thomas and Roy, Nicholas},
booktitle = {International Conference on Intelligent Robots and Systems},
file = {:home/fduvalle/proj/mendeley/papers/Brunskill, Kollar, Roy - 2007 - Topological Mapping Using Spectral Clustering and Classification.pdf:pdf},
title = {{Topological Mapping Using Spectral Clustering and Classification}},
year = {2007}
}
@inproceedings{Rosenthal2012,
author = {Rosenthal, Stephanie and Veloso, Manuela},
booktitle = {Conference on Artificial Intelligence},
file = {:home/fduvalle/proj/mendeley/papers/Rosenthal, Veloso - 2012 - Mobile Robot Planning to Seek Help with Spatially-Situated Tasks.pdf:pdf},
title = {{Mobile Robot Planning to Seek Help with Spatially-Situated Tasks}},
volume = {Conference},
year = {2012}
}
@article{Karaman2011,
abstract = {During the last decade, sampling-based path planning algorithms, such as Probabilistic RoadMaps (PRM) and Rapidly-exploring Random Trees (RRT), have been shown to work well in practice and possess theoretical guarantees such as probabilistic completeness. However, little effort has been devoted to the formal analysis of the quality of the solution returned by such algorithms, e.g., as a function of the number of samples. The purpose of this paper is to fill this gap, by rigorously analyzing the asymptotic behavior of the cost of the solution returned by stochastic sampling-based algorithms as the number of samples increases. A number of negative results are provided, characterizing existing algorithms, e.g., showing that, under mild technical conditions, the cost of the solution returned by broadly used sampling-based algorithms converges almost surely to a non-optimal value. The main contribution of the paper is the introduction of new algorithms, namely, PRM* and RRT*, which are provably asymptotically optimal, i.e., such that the cost of the returned solution converges almost surely to the optimum. Moreover, it is shown that the computational complexity of the new algorithms is within a constant factor of that of their probabilistically complete (but not asymptotically optimal) counterparts. The analysis in this paper hinges on novel connections between stochastic sampling-based path planning algorithms and the theory of random geometric graphs.},
archivePrefix = {arXiv},
arxivId = {1105.1186},
author = {Karaman, Sertac and Frazzoli, Emilio},
eprint = {1105.1186},
file = {:home/fduvalle/proj/mendeley/papers/Karaman, Frazzoli - 2011 - Sampling-based Algorithms for Optimal Motion Planning.pdf:pdf},
journal = {The International Journal of Robotics Research},
keywords = {motion planning,optimal path planning,random geometric graphs,sampling-based algorithms},
title = {{Sampling-based Algorithms for Optimal Motion Planning}},
year = {2011}
}
@inproceedings{Stentz1994,
author = {Stentz, Anthony},
booktitle = {International Conference on Robotics and Automation},
file = {:home/fduvalle/proj/mendeley/papers/Stentz - 1994 - Optimal and efficient path planning for partially-known environments.pdf:pdf},
title = {{Optimal and efficient path planning for partially-known environments}},
year = {1994}
}
@article{Kalman1964,
author = {Kalman, Rudolf Emil},
journal = {Journal of Fluids Engineering},
title = {{When is a linear control system optimal?}},
year = {1964}
}
@article{Kaess2008,
abstract = {In this paper, we present incremental smoothing and mapping (iSAM), which is a novel approach to the simultaneous localization and mapping problem that is based on fast incremental matrix factorization. iSAM provides an efficient and exact solution by updating a QR factorization of the naturally sparse smoothing information matrix, thereby recalculating only those matrix entries that actually change. iSAM is efficient even for robot trajectories with many loops as it avoids unnecessary fill-in in the factor matrix by periodic variable reordering. Also, to enable data association in real time, we provide efficient algorithms to access the estimation uncertainties of interest based on the factored information matrix. We systematically evaluate the different components of iSAM as well as the overall algorithm using various simulated and real-world datasets for both landmark and pose-only settings.},
author = {Kaess, Michael and Ranganathan, Ananth and Dellaert, Frank},
file = {:home/fduvalle/proj/mendeley/papers/Kaess, Ranganathan, Dellaert - 2008 - iSAM Incremental smoothing and mapping.pdf:pdf},
journal = {IEEE Transactions on Robotics},
keywords = {Data association,Localization,Mapping,Mobile robots,Nonlinear estimation,Simultaneous localization and mapping (SLAM),Smoothing},
title = {{iSAM: Incremental smoothing and mapping}},
year = {2008}
}


text:
@thesis{jameswrightStaticPressureRecovery,
 abstract = {Conical diffusers are used in hundreds of engineering applications in various industries. Some of the operating conditions that they operate under cause swirling flow to enter the diffuser. It is generally well documented that the addition of swirl to the flow of a diffuser allows for greater divergence angles without wall separation, resulting in better overall performance of the diffuser and the machine it's attached to. It is also known that as swirl strength is increased, the flow will eventually breakdown, resulting in internal flow recirculation and decreased diffuser performance. However, the relationship between the diffuser geometry and its performance at these higher swirl strengths has not been investigated in detail. This link between diffuser geometry, swirl, and performance is investigated using a hybrid RANS-LES based computational model. A series of simulations are performed with the computational model, varying the swirl strength and diffuser half angle ϕ. Overall, there was found to be little relationship between adjusting the diffuser geometry and diffuser performance at high swirl numbers.},
 author = {James Ray Wright III},
 date = {2019},
 institution = {Clemson University},
 location = {Clemson, SC},
 pagetotal = {44},
 title = {Static Pressure Recovery Effects of Conical Diffusers with Swirling Inlet Flow},
 type = {Master's thesis},
 url = {https://tigerprints.clemson.edu/all_theses/3363/}
}


text:
SUMMARY = "Python vcversioner, automagically update the project's version"
HOMEPAGE = "https://github.com/habnabit/vcversioner"

LICENSE = "ISC"
LIC_FILES_CHKSUM = "file://PKG-INFO;md5=827a7a91a8d20d3c666b665cd96db8e3"

SRC_URI[md5sum] = "aab6ef5e0cf8614a1b1140ed5b7f107d"
SRC_URI[sha256sum] = "dae60c17a479781f44a4010701833f1829140b1eeccd258762a74974aa06e19b"

inherit pypi setuptools3

BBCLASSEXTEND = "native"

repository: ni/meta-openembedded

repo_name: ni/meta-openembedded

branch_name: refs/heads/nilrt/master/hardknott


text:
SUMMARY = "Phosphor OpenBMC BSP Example Application"
DESCRIPTION = "Phosphor OpenBMC QEMU BSP example implementation."
PR = "r1"

DBUS_SERVICES = " \
        org.openbmc.examples.PythonService0 \
        org.openbmc.examples.PythonService1 \
        "

inherit obmc-phosphor-pydbus-service

client = "pyclient-sample"
SRC_URI += "file://${client}.py"
SRC_URI += "file://${PN}.py"
S = "${WORKDIR}"

do_install_append() {
        install -d ${D}${bindir}
        install -m 0755 ${S}/${client}.py ${D}${bindir}/${client}
}


text:
SUMMARY = "Daemon providing a polkit authentication UI for KDE"
LICENSE = "GPLv2"
LIC_FILES_CHKSUM = " \
    file://COPYING;md5=5c213a7de3f013310bd272cdb6eb7a24 \
"

inherit kde-plasma gettext

DEPENDS += " \
    ki18n \
    kwindowsystem \
    kdbusaddons \
    kwidgetsaddons \
    kcoreaddons \
    kcoreaddons-native \
    kcrash \
    kconfig \
    kiconthemes \
    knotifications \
    polkit-qt-1 \
"

PV = "${PLASMA_VERSION}"
SRC_URI[md5sum] = "3565112964f5c905b57c4d3649a74c30"
SRC_URI[sha256sum] = "86422bb5a07f4234e629c6112ff758cd23f6a361f3312fac9d88733e622cc001"

SRC_URI += "file://0001-fix-build-for-QT_NO_SESSIONMANAGER.patch"

FILES_${PN} += "${datadir}/knotifications5"


text:
@techreport{___2014-2,
 author = {井上 直哉 and 河合 紀彦 and 佐藤 智和 and 大倉 史生 and 中島 悠太 and 横矢 直和},
 file = {D-11-43 自由視点画像生成に基づく移動撮影した全方位動画像からの動物体除去(D-11.画像工学,一般セッション) Snapshot:/Users/n-yuta/Zotero/storage/2APHZZAI/110009830023.html:text/html},
 month = {March},
 number = {電子情報通信学会2014年総合大会講演論文集, D-11-43},
 pages = {1},
 title = {自由視点画像生成に基づく移動撮影した全方位動画像からの動物体除去},
 url = {https://ci.nii.ac.jp/naid/110009830023},
 urldate = {2019-04-30},
 year = {2014}
}


text:
@article{Hamdan_Khalil_2005,
  doi = {10.1016/j.bcp.2004.10.011},
  url = {https://doi.org/10.1016\%2Fj.bcp.2004.10.011},
  year = 2005,
  month = {feb},
  publisher = {Elsevier {BV}},
  volume = {69},
  number = {3},
  pages = {525--529},
  author = {Rima Hamdan-Khalil and Jean-Luc Gala and Delphine Allorge and Jean-Marc Lo-Guidice and Yves Horsmans and Nicole Houdret and Franck Broly},
  title = {Identification and functional analysis of two rare allelic variants of the thiopurine S-methyltransferase gene, {TPMT}{\ast}16 and {TPMT}{\ast}19},
  journal = {Biochemical Pharmacology}
}

repository: larmcr/px

repo_name: larmcr/px


text:
% Encoding: UTF-8

@Article{matlabSegmentationTutorial,
  author    = {Image Analyst},
  title     = {Image Segmentation Tutorial},
  journal   = {MATLAB},
  year      = {2015},
}

@Article{matlabTumor,
  author    = {Chandra Sekhar Ravuri},
  title     = {Automatic segmentation of brain tumor in mr images},
  journal   = {MATLAB},
  year      = {2015},
}

@Article{matlabTumor2,
  author    = {Shazid Mahmood},
  title     = {Brain tumor detection from MRI images using anisotropic filter and segmentation image processing},
  journal   = {MATLAB},
  year      = {2017},
}

@Article{Ashburner2005,
  author    = {Ashburner, John and Friston, Karl J},
  title     = {Unified segmentation},
  journal   = {Neuroimage},
  year      = {2005},
  volume    = {26},
  number    = {3},
  pages     = {839--851},
  publisher = {Elsevier},
}

@Article{Ashton2003,
  author    = {Ashton, Edward A and Takahashi, Chihiro and Berg, Michel J and Goodman, Andrew and Totterman, Saara and Ekholm, Sven},
  title     = {Accuracy and reproducibility of manual and semiautomated quantification of {MS} lesions by {MRI}},
  journal   = {Journal of Magnetic Resonance Imaging},
  year      = {2003},
  volume    = {17},
  number    = {3},
  pages     = {300--308},
  publisher = {Wiley Online Library},
}

@Article{Bates2003,
  author    = {Bates, Elizabeth and Wilson, Stephen M and Saygin, Ayse Pinar and Dick, Frederic and Sereno, Martin I and Knight, Robert T and Dronkers, Nina F},
  title     = {Voxel-based lesion--symptom mapping},
  journal   = {Nature neuroscience},
  year      = {2003},
  volume    = {6},
  number    = {5},
  pages     = {448--450},
  publisher = {Nature Publishing Group},
}

@Article{chen2010voxel,
  author    = {Chen, Rong and Herskovits, Edward H},
  title     = {Voxel-based {Bayesian} lesion--symptom mapping},
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  year      = {2010},
  volume    = {49},
  number    = {1},
  pages     = {597--602},
  publisher = {Elsevier},
}

@Article{crinion2007spatial,
  author    = {Crinion, Jenny and Ashburner, John and Leff, Alex and Brett, Matthew and Price, Cathy and Friston, Karl},
  title     = {Spatial normalization of lesioned brains: performance evaluation and impact on {fMRI} analyses},
  journal   = {Neuroimage},
  year      = {2007},
  volume    = {37},
  number    = {3},
  pages     = {866--875},
  publisher = {Elsevier},
}

@Article{crinion2013neuroimaging,
  author    = {Crinion, Jenny and Holland, Audrey L and Copland, David A and Thompson, Cynthia K and Hillis, Argye E},
  title     = {Neuroimaging in aphasia treatment research: quantifying brain lesions after stroke},
  journal   = {Neuroimage},
  year      = {2013},
  volume    = {73},
  pages     = {208--214},
  publisher = {Elsevier},
}

@Article{domingos1997optimality,
  author    = {Domingos, Pedro and Pazzani, Michael},
  title     = {On the optimality of the simple {Bayesian} classifier under zero-one loss},
  journal   = {Machine learning},
  year      = {1997},
  volume    = {29},
  number    = {2-3},
  pages     = {103--130},
  publisher = {Springer},
}

@Article{fiez2000lesion,
  author    = {Fiez, Julie A and Damasio, Hanna and Grabowski, Thomas J},
  title     = {Lesion segmentation and manual warping to a reference brain: Intra-and interobserver reliability},
  journal   = {Human brain mapping},
  year      = {2000},
  volume    = {9},
  number    = {4},
  pages     = {192--211},
  publisher = {Wiley Online Library},
}

@Article{geva2012comparison,
  author    = {Geva, Sharon and Baron, Jean-Claude and Jones, P Simon and Price, Cathy J and Warburton, Elizabeth A},
  title     = {{A comparison of VLSM and VBM in a cohort of patients with post-stroke aphasia}},
  journal   = {NeuroImage: Clinical},
  year      = {2012},
  volume    = {1},
  number    = {1},
  pages     = {37--47},
  publisher = {Elsevier},
}

@Article{mehta2003evaluation,
  author    = {Mehta, Sonya and Grabowski, Thomas J and Trivedi, Yogi and Damasio, Hanna},
  title     = {Evaluation of voxel-based morphometry for focal lesion detection in individuals},
  journal   = {Neuroimage},
  year      = {2003},
  volume    = {20},
  number    = {3},
  pages     = {1438--1454},
  publisher = {Elsevier},
}

@Article{mitra2014lesion,
  author    = {Mitra, Jhimli and Bourgeat, Pierrick and Fripp, Jurgen and Ghose, Soumya and Rose, Stephen and Salvado, Olivier and Connelly, Alan and Campbell, Bruce and Palmer, Susan and Sharma, Gagan and others},
  title     = {Lesion segmentation from multimodal {MRI} using random forest following ischemic stroke},
  journal   = {NeuroImage},
  year      = {2014},
  volume    = {98},
  pages     = {324--335},
  publisher = {Elsevier},
}

@Article{raizada2013smoothness,
  author    = {Raizada, Rajeev DS and Lee, Yune-Sang},
  title     = {{Smoothness without smoothing: why Gaussian naive Bayes is not naive for multi-subject searchlight studies}},
  journal   = {PloS one},
  year      = {2013},
  volume    = {8},
  number    = {7},
  pages     = {e69566},
  publisher = {Public Library of Science},
}

@Article{pereira2009machine,
  author    = {Pereira, Francisco and Mitchell, Tom and Botvinick, Matthew},
  title     = {Machine learning classifiers and {fMRI}: a tutorial overview},
  journal   = {Neuroimage},
  year      = {2009},
  volume    = {45},
  number    = {1},
  pages     = {S199--S209},
  publisher = {Elsevier},
}

@Article{ripolles2012analysis,
  author    = {Ripolles, P and Marco-Pallar{\'e}s, Josep and de Diego-Balaguer, Ruth and Miro, J and Falip, M and Juncadella, M and Rubio, F and Rodriguez-Fornells, Antoni},
  title     = {Analysis of automated methods for spatial normalization of lesioned brains},
  journal   = {Neuroimage},
  year      = {2012},
  volume    = {60},
  number    = {2},
  pages     = {1296--1306},
  publisher = {Elsevier},
}

@Article{rish2001analysis,
  author  = {Rish, Irina and Hellerstein, Joseph and Thathachar, Jayram},
  title   = {An analysis of data characteristics that affect naive Bayes performance},
  journal = {IBM TJ Watson Research Center},
  year    = {2001},
  volume  = {30},
}

@Article{rorden2009evaluation,
  author    = {Rorden, Chris and Fridriksson, Julius and Karnath, Hans-Otto},
  title     = {An evaluation of traditional and novel tools for lesion behavior mapping},
  journal   = {Neuroimage},
  year      = {2009},
  volume    = {44},
  number    = {4},
  pages     = {1355--1362},
  publisher = {Elsevier},
}

@Article{rorden2007improving,
  author    = {Rorden, Chris and Karnath, Hans-Otto and Bonilha, Leonardo},
  title     = {Improving lesion-symptom mapping},
  journal   = {Journal of cognitive neuroscience},
  year      = {2007},
  volume    = {19},
  number    = {7},
  pages     = {1081--1088},
  publisher = {MIT Press},
}

@Article{seghier2008lesion,
  author    = {Seghier, Mohamed L and Ramlackhansingh, Anil and Crinion, Jenny and Leff, Alexander P and Price, Cathy J},
  title     = {Lesion identification using unified segmentation-normalisation models and fuzzy clustering},
  journal   = {Neuroimage},
  year      = {2008},
  volume    = {41},
  number    = {4},
  pages     = {1253--1266},
  publisher = {Elsevier},
}

@Article{wilke2011manual,
  author    = {Wilke, Marko and de Haan, Bianca and Juenger, Hendrik and Karnath, Hans-Otto},
  title     = {Manual, semi-automated, and automated delineation of chronic brain lesions: a comparison of methods},
  journal   = {Neuroimage},
  year      = {2011},
  volume    = {56},
  number    = {4},
  pages     = {2038--2046},
  publisher = {Elsevier},
}

@Article{zijdenbos1993brain,
  author  = {Zijdenbos, Alex P and Dawant, Benoit M},
  title   = {Brain segmentation and white matter lesion detection in {MR} images.},
  journal = {Critical reviews in biomedical engineering},
  year    = {1993},
  volume  = {22},
  number  = {5-6},
  pages   = {401--465},
}

@Article{alfano2000automated,
  author    = {Alfano, Bruno and Brunetti, Arturo and Larobina, Michele and Quarantelli, Mario and Tedeschi, Enrico and Ciarmiello, Andrea and Covelli, Eugenio M and Salvatore, Marco},
  title     = {{Automated segmentation and measurement of global white matter lesion volume in patients with multiple sclerosis}},
  journal   = {Journal of Magnetic Resonance Imaging},
  year      = {2000},
  volume    = {12},
  number    = {6},
  pages     = {799--807},
  publisher = {Wiley Online Library},
}

@Article{ballester2000segmentation,
  author    = {Ballester, Miguel Angel Gonzalez and Zisserman, Andrew and Brady, Michael},
  title     = {Segmentation and measurement of brain structures in {MRI} including confidence bounds},
  journal   = {Medical Image Analysis},
  year      = {2000},
  volume    = {4},
  number    = {3},
  pages     = {189--200},
  publisher = {Elsevier},
}

@Article{van2001automated,
  author    = {Van Leemput, Koen and Maes, Frederik and Vandermeulen, Dirk and Colchester, Alan and Suetens, Paul},
  title     = {Automated segmentation of multiple sclerosis lesions by model outlier detection},
  journal   = {IEEE transactions on medical imaging},
  year      = {2001},
  volume    = {20},
  number    = {8},
  pages     = {677--688},
  publisher = {IEEE},
}

@Article{kwan1999mri,
  author    = {Kwan, RK-S and Evans, Alan C and Pike, G Bruce},
  title     = {{MRI} simulation-based evaluation of image-processing and classification methods},
  journal   = {IEEE transactions on medical imaging},
  year      = {1999},
  volume    = {18},
  number    = {11},
  pages     = {1085--1097},
  publisher = {IEEE},
}

@InProceedings{kwan1996extensible,
  author       = {Kwan, Remi K-S and Evans, Alan C and Pike, G Bruce},
  title        = {An extensible {MRI} simulator for post-processing evaluation},
  booktitle    = {Visualization in biomedical computing},
  year         = {1996},
  pages        = {135--140},
  organization = {Springer},
}

@InProceedings{ashton2001automated,
  author       = {Ashton, Edward and Totterman, Saara and Takahashi, Chihiro and Tamez-Pena, Jose and Parker, Kevin J},
  title        = {Automated Measurement of Structures on {CT} and {MR} Imagery: A Validation Study},
  booktitle    = {Proceedings of the Fourteenth IEEE Symposium on Computer-Based Medical Systems},
  year         = {2001},
  pages        = {300},
  organization = {IEEE Computer Society},
}

@Article{ashton1997novel,
  author    = {Ashton, Edward A and Parker, Kevin J and Berg, Michel J and Chen, Chang Wen},
  title     = {A novel volumetric feature extraction technique with applications to {MR} images},
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  year      = {1997},
  volume    = {16},
  number    = {4},
  pages     = {365--371},
  publisher = {IEEE},
}

@InProceedings{taylor1994image,
  author       = {Taylor, David C and Barrett, William A},
  title        = {Image segmentation using globally optimal growth in three dimensions with an adaptive feature set},
  booktitle    = {Visualization in Biomedical Computing 1994},
  year         = {1994},
  pages        = {98--107},
  organization = {International Society for Optics and Photonics},
}

@Article{pustina2016automated,
  author    = {Pustina, Dorian and Coslett, H and Turkeltaub, Peter E and Tustison, Nicholas and Schwartz, Myrna F and Avants, Brian},
  title     = {Automated segmentation of chronic stroke lesions using {LINDA}: lesion identification with neighborhood data analysis},
  journal   = {Human brain mapping},
  year      = {2016},
  publisher = {Wiley Online Library},
}

@Article{griffis2016voxel,
  author    = {Griffis, Joseph C and Allendorfer, Jane B and Szaflarski, Jerzy P},
  title     = {{Voxel-based Gaussian na{\"\i}ve Bayes classification of ischemic stroke lesions in individual T1-weighted MRI scans}},
  journal   = {Journal of neuroscience methods},
  year      = {2016},
  volume    = {257},
  pages     = {97--108},
  publisher = {Elsevier},
}

@Article{de2015fast,
  author    = {de Haan, Bianca and Clas, Philipp and Juenger, Hendrik and Wilke, Marko and Karnath, Hans-Otto},
  title     = {Fast semi-automated lesion demarcation in stroke},
  journal   = {NeuroImage: Clinical},
  year      = {2015},
  volume    = {9},
  pages     = {69--74},
  publisher = {Elsevier},
}

@Article{li2015local,
  author    = {Li, Xin-Wei and Li, Qiong-Ling and Li, Shu-Yu and Li, De-Yu},
  title     = {Local manifold learning for multiatlas segmentation: application to hippocampal segmentation in healthy population and Alzheimer's disease},
  journal   = {CNS Neuroscience \& Therapeutics},
  year      = {2015},
  volume    = {21},
  number    = {10},
  pages     = {826--836},
  publisher = {Wiley Online Library},
}

@Article{harmouche2015probabilistic,
  author    = {Harmouche, Rola and Subbanna, Nagesh K and Collins, D Louis and Arnold, Douglas L and Arbel, Tal},
  title     = {Probabilistic Multiple Sclerosis Lesion Classification Based on Modeling Regional Intensity Variability and Local Neighborhood Information},
  journal   = {IEEE Transactions on Biomedical Engineering},
  year      = {2015},
  volume    = {62},
  number    = {5},
  pages     = {1281--1292},
  publisher = {IEEE},
}

@Article{petoe2014template,
  author    = {Petoe, Matthew A and Byblow, Winston D and de Vries, Esther JM and Krishnamurthy, Venkatesh and Zhong, Cathy S and Barber, P Alan and Stinear, Cathy M},
  title     = {A template-based procedure for determining white matter integrity in the internal capsule early after stroke},
  journal   = {NeuroImage: Clinical},
  year      = {2014},
  volume    = {4},
  pages     = {695--700},
  publisher = {Elsevier},
}

@Article{gillebert2014automated,
  author    = {Gillebert, Celine R and Humphreys, Glyn W and Mantini, Dante},
  title     = {Automated delineation of stroke lesions using brain {CT} images},
  journal   = {NeuroImage: Clinical},
  year      = {2014},
  volume    = {4},
  pages     = {540--548},
  publisher = {Elsevier},
}

@Article{elliott2013temporally,
  author    = {Elliott, Colm and Arnold, Douglas L and Collins, D Louis and Arbel, Tal},
  title     = {Temporally consistent probabilistic detection of new multiple sclerosis lesions in brain MRI},
  journal   = {IEEE Transactions On medical imaging},
  year      = {2013},
  volume    = {32},
  number    = {8},
  pages     = {1490--1503},
  publisher = {IEEE},
}

@Article{llado2012automated,
  author    = {Llad{\'o}, Xavier and Ganiler, Onur and Oliver, Arnau and Mart{\'\i}, Robert and Freixenet, Jordi and Valls, Laia and Vilanova, Joan C and Rami{\'o}-Torrent{\`a}, Llu{\'\i}s and Rovira, {\`A}lex},
  title     = {Automated detection of multiple sclerosis lesions in serial brain {MRI}},
  journal   = {Neuroradiology},
  year      = {2012},
  volume    = {54},
  number    = {8},
  pages     = {787--807},
  publisher = {Springer},
}

@Article{renz2011accuracy,
  author    = {Renz, Diane M and Hahn, Horst K and Schmidt, Peter and Rexilius, Jan and Lentschig, Markus and Pfeil, Alexander and Sauner, Dieter and Fitzek, Clemens and Mentzel, Hans-Joachim and Kaiser, Werner A and others},
  title     = {Accuracy and reproducibility of a novel semi-automatic segmentation technique for {MR} volumetry of the pituitary gland},
  journal   = {Neuroradiology},
  year      = {2011},
  volume    = {53},
  number    = {4},
  pages     = {233--244},
  publisher = {Springer},
}

@Article{chen2008voxelwise,
  author    = {Chen, Rong and Hillis, Argye E and Pawlak, Mikolaj and Herskovits, Edward H},
  title     = {Voxelwise {Bayesian} lesion-deficit analysis},
  journal   = {NeuroImage},
  year      = {2008},
  volume    = {40},
  number    = {4},
  pages     = {1633--1642},
  publisher = {Elsevier},
}

@Article{maier2015extra,
  author    = {Maier, Oskar and Wilms, Matthias and von der Gablentz, Janina and Kr{\"a}mer, Ulrike M and M{\"u}nte, Thomas F and Handels, Heinz},
  title     = {Extra Tree forests for sub-acute ischemic stroke lesion segmentation in {MR} sequences},
  journal   = {Journal of neuroscience methods},
  year      = {2015},
  volume    = {240},
  pages     = {89--100},
  publisher = {Elsevier},
}

@InProceedings{collins1995automatic,
  author       = {Collins, DL and Evans, AC and Holmes, C and Peters, TM},
  title        = {{Automatic 3D segmentation of neuro-anatomical structures from MRI}},
  booktitle    = {Information processing in medical imaging},
  year         = {1995},
  volume       = {3},
  pages        = {139--152},
  organization = {Kluwer Dordrecht},
}

@Misc{griffisSrcDLweb,
  author       = {Joseph C. Griffis},
  title        = {{lesion gnb toolbox for SPM12}},
  howpublished = {Online},
  month        = mar,
  year         = {2016},
  note         = {Accessed November 2016},
  url          = {https://www.researchgate.net/profile/Joseph_Griffis/publications},
}

@Misc{spm12DL,
  author       = {By members \& collaborators of the Wellcome Trust Centre for Neuroimaging},
  title        = {{Statistical Parametric Mapping - SPM}},
  howpublished = {Online},
  note         = {Accessed November 2016 at: www.fil.ion.ucl.ac.uk/spm/software/},
  url          = {http://www.fil.ion.ucl.ac.uk/spm/software/},
}

@Article{macdonald2000automated,
  author    = {MacDonald, David and Kabani, Noor and Avis, David and Evans, Alan C},
  title     = {{Automated 3-D extraction of inner and outer surfaces of cerebral cortex from MRI}},
  journal   = {NeuroImage},
  year      = {2000},
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}

@Article{pitiot2004expert,
  author    = {Pitiot, Alain and Delingette, Herv{\'e} and Thompson, Paul M and Ayache, Nicholas},
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  year      = {2004},
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}

@Article{ashburner1999nonlinear,
  author  = {Ashburner, John and Friston, Karl J and others},
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@Article{dice1945measures,
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}

@Comment{jabref-meta: databaseType:bibtex;}


text:
DESCRIPTION = "An advanced menu editor"
HOMEPAGE = "https://launchpad.net/menulibre"
SECTION = "x11/graphics"
LICENSE = "GPLv3"
LIC_FILES_CHKSUM = "file://COPYING;md5=d32239bcb673463ab874e80d47fae504"

DEPENDS = "python3-distutils-extra-native"

inherit distutils3 gtk-icon-cache

SRC_URI = " \
    https://launchpad.net/menulibre/2.1/${PV}/+download/${PN}-${PV}.tar.gz \
    file://0001-add_launcher-Exit-early-if-no-row-is-selected.patch \
    file://0002-setup.py-avoid-usr-share-share-paths.patch \
    file://0003-MenulibreXdg.py-fix-loading-of-desktop-files.patch \
"
SRC_URI[md5sum] = "19d9d3337322eb5513454bb8cdfb739b"
SRC_URI[sha256sum] = "bdd69740119902f1b1f8c7831155f4428403792a0a6c4287bcbb395c4e71fb31"

do_install_append() {
    sed -i 's:${D}::g' ${D}${datadir}/applications/menulibre.desktop
}

FILES_${PN} += " \
    ${datadir}/applications \
    ${datadir}/menulibre \
    ${datadir}/icons \
"

RDEPENDS_${PN} += " \
    gtk+3 \
    python3-pygobject \
    gnome-menus3 \
    python3-unixadmin \
    python3-psutil \
"

repository: ShotSpotter/meta-openembedded

repo_name: ShotSpotter/meta-openembedded