text:
Support, Non-U.S. Gov't
United States
World J Gastroenterol. 2006 Mar 14;12(10):1617-20.},
   abstract = {AIM: To determine the association between the HLA-DRB1 alleles and perinuclear anti-neutrophil cytoplasmatic antibodies (p-ANCA) positive in Mexican patients with ulcerative colitis (UC). METHODS: Ninety Mexican mestizo patients (45 females) with UC, confirmed by biopsy, were studied. High resolution HLA typing was performed by PCR-SSO reverse dot blot and PCR-SSP. Molecular typing techniques were applied to define HLA-DRB1 alleles. Enzyme-linked immunosorbent assay and immunofluorescence techniques were used to detect p-ANCA. RESULTS: Forty-eight (53%) UC patients were positive for p-ANCA by ELISA and IF. We found that p-ANCA-positive UC patients had a significantly increased frequency of HLA-DR7 compared with p-ANCA-negative controls (22% vs 5.1%; pC=0.02, OR=5.2, CI 95%: 1.06-37.82). Disease activity was scored as severe in 20 patients, moderate in 8, mild in 14 and no activity in the remaining 38 patients according to the Truelove and Witts criteria. Subgroup analysis showed a significantly increased frequency of the HLA-DRB1*07 allele in 15 of 20 UC patients with severe activity of UC and p-ANCA positivity [100% vs 0%; pC=0.0000001; OR=35]. No significant differences were found between p-ANCA positive patients, HLA-DR alleles and other clinical features such as extraintestinal manifestations, proctocolectomy and extension. CONCLUSION: The HLA-DRB1*07 is associated with p-ANCA positive UC Mexican patients.},
   keywords = {Adult
Alleles
Antibodies, Antineutrophil Cytoplasmic/*blood
Colitis, Ulcerative/*ethnology/*immunology
Female
HLA-DR Antigens/*genetics
HLA-DRB1 Chains
Humans
Male
Mexico
Severity of Illness Index},
   ISSN = {1007-9327 (Print)
1007-9327},
   Accession Number = {16570357},
   year = {2006},
   type = {Ref–rence Type}
}

@article{
   author = {Yuan, Q. and Walker, W. A.},
   title = {Worm therapy for ulcerative colitis: a possible link to regulatory T cells},
   journal = {J Pediatr Gastroenterol Nutr},
   volume = {41},
   number = {1},
   pages = {139-40},
   note = {Yuan, Qian
Walker, W Allan
Journal Article
United States
J Pediatr Gastroenterol Nutr. 2005 Jul;41(1):139-40.},
   keywords = {Animals
Colitis, Ulcerative/*immunology/parasitology/*therapy
Host-Parasite Interactions
Humans
T-Lymphocytes/*immunology
Treatment Outcome
Trichuriasis/parasitology
Trichuris/*immunology},
   ISSN = {0277-2116 (Print)
0277-2116},
   Accession Number = {15990650},
   year = {2005},
   type = {Ref–rence Type}
}

@article{
   author = {Zheng, J. J.},
   title = {Clinical aspects of ulcerative colitis in mainland China},
   journal = {Chin J Dig Dis},
   volume = {7},
   number = {2},
   pages = {71-5},
   note = {Zheng, Jia Ju
Journal Article
Review
Australia
Chin J Dig Dis. 2006;7(2):71-5.},
   abstract = {Inflammatory bowel disease (IBD), including Crohn's disease (CD) and ulcerative colitis (UC), is reported to be increasing in incidence and prevalence in provinces and cities in mainland China. This article specifically reviews clinical features, extra-intestinal manifestations, complications, diagnosis and differential diagnosis, and medical treatment of UC. Compared to patients in Western countries, more mild to moderate and left-sided colitis cases were observed in a nation-wide study in China. Complications included anal fistula, anal abscess, anal fissure, severe bleeding, intestinal perforation, intestinal obstruction and colonic carcinoma. The extra-intestinal manifestations were arthritis/arthralgia, eye and skin disorders and oral ulcers. The high specificity of antineutrophil cytoplasmic antibody may useful for distinguishing UC from infectious colitis; in addition, serum levels of anti-saccharomyces cerevisiae antibody may be helpful for distinguishing between UC and CD. Oral sulfasalazine and 5-aminosalicylic acid (ASA) remain the mainstays for the management of mild to moderate UC in China. Corticosteroids and immunosuppressive agents are also widely used in severe or refractory UC.},
   keywords = {Aminosalicylic Acids/therapeutic use
Anti-Inflammatory Agents, Non-Steroidal/therapeutic use
China/epidemiology
Colitis, Ulcerative/diagnosis/drug therapy/epidemiology/etiology/*pathology
Crohn Disease/diagnosis
Diagnosis, Differential
Diagnostic Errors
Humans
Sulfasalazine/therapeutic use},
   ISSN = {1443-9611 (Print)
1443-9573},
   Accession Number = {16643333},
   DOI = {10.1111/j.1443-9573.2006.00251.x},
   year = {2006},
   type = {Ref–rence Type}
}

@article{
   author = {Zvirbliene, A. and Kiudelis, G. and Zalinkevicius, R. and Kupcinskas, L.},
   title = {[Dietary characteristics of patients with inflammatory bowel diseases]},
   journal = {Medicina (Kaunas)},
   volume = {42},
   number = {11},
   pages = {895-9},
   note = {1648-9144
Zvirbliene, Aida
Kiudelis, Gediminas
Zalinkevicius, Rimantas
Kupcinskas, Limas
Comparative Study
Evaluation Studies
Journal Article
Netherlands
Medicina (Kaunas). 2006;42(11):895-9.},
   abstract = {OBJECTIVE: To evaluate nutritional status and dietary habits of Lithuanian patients with ulcerative colitis and Crohn's disease and to compare with those of healthy controls. MATERIALS AND METHODS: A case-control study was conducted in the Department of Gastroenterology, Kaunas University of Medicine Hospital. A total of 101 patients with ulcerative colitis, 44 with Crohn's disease, and 178 healthy controls were examined with the help of standard self-report questionnaire about daily dietary habits. Healthy controls were evaluated in primary care centers during preventive examinations. Body mass index was calculated for all patients in a standard way. RESULTS: There was no statistically significant difference between patients and controls concerning consumption of coffee, tea, chewing gum, type of fat for meal preparation, white bread, cooked potatoes and sausages, non-carbonated water. Patients with inflammatory bowel diseases statistically significantly less frequently consumed fresh milk, cheese, fish, fried potatoes, and soda drinks. Patients with Crohn's disease statistically significantly less frequently consumed fresh fruits and patients with ulcerative colitis--fresh vegetables as compared to controls. Body mass index of patients with inflammatory bowel diseases was significantly lower compared to controls, and patients with Crohn's disease had significantly lower body mass index than ulcerative colitis patients. CONCLUSIONS: Patients with inflammatory bowel diseases have lower body mass index than healthy controls. Patients consume fresh milk, cheese, canned and fresh vegetables and fruits less frequently; therefore, primary care physicians and patients should be provided with teaching and more information about nutrition issues.},
   keywords = {Adult
Body Mass Index
Case-Control Studies
*Colitis, Ulcerative/epidemiology
*Crohn Disease/epidemiology
Diet Surveys
*Feeding Behavior
Female
Humans
Male
Middle Aged
*Nutritional Status
Patient Education as Topic
Primary Health Care
Rural Population
Surveys and Questionnaires
Urban Population},
   ISSN = {1010-660x},
   Accession Number = {17172790},
   year = {2006},
   type = {Ref–rence Type}
}

repository: KociOrges/pytag

repo_name: KociOrges/pytag


text:
@article{martiniano2016genomic,
 author = {Martiniano, Rui and Caffell, Anwen and Holst, Malin and Hunter-Mann, Kurt and Montgomery, Janet and Müldner, Gundula and McLaughlin, Russell L and Teasdale, Matthew D and Van Rheenen, Wouter and Veldink, Jan H and others},
 journal = {Nature communications},
 number = {1},
 pages = {1--8},
 publisher = {Nature Publishing Group},
 title = {Genomic signals of migration and continuity in Britain before the Anglo-Saxons},
 volume = {7},
 year = {2016}
}

license: MIT

repository: ruidlpm/academic-kickstart

license_type: permissive

repo_name: ruidlpm/academic-kickstart

branch_name: refs/heads/master

gha_license_id: MIT

extension: bib


text:
SUMMARY = "Pythonic argument parser, that will make you smile"
HOMEPAGE = "http://docopt.org/"
LICENSE = "MIT"
LIC_FILES_CHKSUM = "file://LICENSE-MIT;md5=09b77fb74986791a3d4a0e746a37d88f"

inherit setuptools3 pypi

SRC_URI[md5sum] = "4bc74561b37fad5d3e7d037f82a4c3b1"
SRC_URI[sha256sum] = "49b3a825280bd66b3aa83585ef59c4a8c82f2c8a522dbe754a8bc8d08c85c491"

BBCLASSEXTEND = "native nativesdk"

repository: openembedded/meta-openembedded

repo_name: openembedded/meta-openembedded

gha_language: BitBake

extension: bb


text:
# Configure the SWIG options that will be required in this project. The
# following variables will be set
# 1.)
MACRO(ENABLE_SWIG_SUPPORT)

  # Add the user supplied SWIG prefix to help find SWIG
  IF(DEFINED SWIG_PREFIX)
    SET(CMAKE_PREFIX_PATH ${SWIG_PREFIX} ${CMAKE_PREFIX_PATH})
  ENDIF()

  # Find the SWIG package available on this system
  FIND_PACKAGE(SWIG 4.0.0 REQUIRED)

  # Find the python package available on this system
  FIND_PACKAGE(PythonInterp 2.7 REQUIRED)
  FIND_PACKAGE(PythonLibs 2.7 REQUIRED)

  # Find the numpy package available on this system
  FIND_PACKAGE(NumPy 1.8 REQUIRED)

  IF(CMAKE_VERBOSE_CONFIGURE)
    MESSAGE("Found Python Interpreter! Here are the details: ")
    MESSAGE("  PYTHON_EXECUTABLE = ${PYTHON_EXECUTABLE}")
    MESSAGE("  PYTHON_VERSION = ${PYTHON_VERSION_STRING}")
    MESSAGE("End of Python Interpreter details\n")
    MESSAGE("Found Python Libraries! Here are the details: ")
    MESSAGE("  PYTHON_LIBRARIES = ${PYTHON_LIBRARIES}")
    MESSAGE("  PYTHON_INCLUDE_DIRS = ${PYTHON_INCLUDE_DIRS}")
    MESSAGE("  PYTHONLIBS_VERSION_STRING = ${PYTHONLIBS_VERSION_STRING}")
    MESSAGE("End of Python Library details\n")
    MESSAGE("Found SWIG! Here are the details: ")
    MESSAGE("  SWIG_DIR = ${SWIG_DIR}")
    MESSAGE("  SWIG_EXECUTABLE = ${SWIG_EXECUTABLE}")
    MESSAGE("  SWIG_VERSION = ${SWIG_VERSION}")
    MESSAGE("End of SWIG details\n")
  ENDIF()

ENDMACRO()

repository: FRENSIE/FRENSIE

repo_name: FRENSIE/FRENSIE

gha_license_id: NOASSERTION

extension: cmake


text:
package files

import (
	"net/mail"
	"net/url"

	"github.com/cafrias/clcity/pkg/gtfs"
)

var _ gtfs.FeedFile = new(Agencies)
var _ gtfs.FeedFileEntry = &Agency{}

// Agencies is a map with all agencies represented on 'agency.txt' file of the GTFS feed.
type Agencies map[AgencyID]*Agency

// FileName returns the GTFS filename.
func (a Agencies) FileName() string {
	return AgencyFileName
}

// FileHeaders returns the headers for this GTFS file
func (a Agencies) FileHeaders() []string {
	return AgencyFileHeaders
}

// FileEntries return all file entries for this GTFS file
func (a Agencies) FileEntries() []gtfs.FeedFileEntry {
	ret := []gtfs.FeedFileEntry{}

	for _, ag := range a {
		ret = append(ret, ag)
	}

	return ret
}

// AgencyID represents the ID for an Agency
type AgencyID string

// Agency represents a single Agency that can be saved on the 'agency.txt' GTFS feed file
type Agency struct {
	ID       AgencyID
	Name     string
	URL      url.URL
	Timezone gtfs.Timezone
	Lang     gtfs.LanguageISO6391
	Phone    string
	FareURL  url.URL
	Email    mail.Address
}

// Validate validates the Agency struct is valid as of GTFS specification
func (a *Agency) Validate() (bool, *gtfs.ErrValidation) {
	ok := true
	err := new(gtfs.ErrValidation)
	err.File = "agency.txt"
	err.Fields = make(map[string]string)

	// TODO: refactor to more reusable code
	if a.Name == "" {
		ok = false
		err.Fields["agency_name"] = ""
	}
	if a.URL.String() == "" {
		ok = false
		err.Fields["agency_url"] = ""
	}
	if a.Timezone.Validate() == false {
		ok = false
		err.Fields["agency_timezone"] = string(a.Timezone)
	}
	if string(a.Lang) != "" && a.Lang.Validate() == false {
		ok = false
		err.Fields["agency_lang"] = string(a.Lang)
	}

	if ok == true {
		return ok, nil
	}

	return ok, err
}

// Flatten returns the struct flattened for passing it to CSV parser.
func (a *Agency) Flatten() []string {
	return []string{
		string(a.ID),
		a.Name,
		a.URL.String(),
		string(a.Timezone),
		string(a.Lang),
		a.Phone,
		a.FareURL.String(),
		a.Email.Address,
	}
}

repository: cafrias/clcity

repo_name: cafrias/clcity

extension: go


text:
@article{Valerie_2016,
  doi = {10.1158/0008-5472.can-16-0584},
  url = {https://doi.org/10.1158\%2F0008-5472.can-16-0584},
  year = 2016,
  month = {aug},
  publisher = {American Association for Cancer Research ({AACR})},
  volume = {76},
  number = {18},
  pages = {5501--5511},
  author = {Nicholas C.K. Valerie and Anna Hagenkort and Brent D.G. Page and Geoffrey Masuyer and Daniel Rehling and Megan Carter and Luka Bevc and Patrick Herr and Evert Homan and Nina G. Sheppard and P{\aa}l Stenmark and Ann-Sofie Jemth and Thomas Helleday},
  title = {{NUDT}15 Hydrolyzes 6-Thio-{DeoxyGTP} to Mediate the Anticancer Efficacy of 6-Thioguanine},
  journal = {Cancer Research}
}

repository: larmcr/px

repo_name: larmcr/px


text:
SUMMARY = "recipe for sshserver image"
DESCRIPTION = "sshserver image"
LICENSE = "MIT"
require recipes-core/images/core-image-base.bb

# set a default password for root
inherit extrausers
EXTRA_USERS_PARAMS = "\
    usermod -P yocto root; \
"

# Add ssh server
IMAGE_FEATURES += " ssh-server-dropbear"

# Configure timezone data
IMAGE_INSTALL += "tzdata"

# Add wifi and bluetooth firmware
IMAGE_INSTALL += "linux-firmware-bcm43430"

# Add Network Manager
IMAGE_INSTALL += "networkmanager networkmanager-bash-completion networkmanager-nmtui"

repository: beattie/YoctoRaspberryPiExperiments

repo_name: beattie/YoctoRaspberryPiExperiments

branch_name: refs/heads/main


text:
SUMMARY = "Miscellaneous files for GrayS initial subsystem"
DESCRIPTION = "The rc.initial files package creates the initial menu option for GrayS"
SECTION = "base"
LICENSE="CLOSED"

SRC_URI = "file://rc.initial \
           file://rc.initial.toggle_ips \
           file://rc.initial.ping \
           file://rc.initial.showports \
           file://rc.initial.toggle_sshd \
           file://rc.initial.setinterfaceip \
          "

do_compile() {
}

do_install() {
    install -d ${D}${sysconfdir}
    install -c -m 0755 ${WORKDIR}/rc.initial ${D}${sysconfdir}/rc.initial
    install -c -m 0755 ${WORKDIR}/rc.initial.toggle_ips ${D}${sysconfdir}/rc.initial.toggle_ips
    install -c -m 0755 ${WORKDIR}/rc.initial.ping ${D}${sysconfdir}/rc.initial.ping
    install -c -m 0755 ${WORKDIR}/rc.initial.showports ${D}${sysconfdir}/rc.initial.showports
    install -c -m 0755 ${WORKDIR}/rc.initial.setinterfaceip ${D}${sysconfdir}/rc.initial.setinterfaceip
    install -c -m 0755 ${WORKDIR}/rc.initial.toggle_sshd ${D}${sysconfdir}/rc.initial.toggle_sshd
}

INHIBIT_PACKAGE_STRIP = "1"
INHIBIT_PACKAGE_DEBUG_SPLIT = "1"
INSANE_SKIP_${PN} += "already-stripped ldflags host-user-contaminated libdir arch"

repository: SrijanNandi/meta-grays

repo_name: SrijanNandi/meta-grays


text:
DESCRIPTION = "LyX is an advanced type setting processor - a frontend for LaTeX"
SECTION = "x11/office"
LICENSE = "GPL"
HOMEPAGE = "http://www.lyx.org"
DEPENDS = "qt4-x11-free"
RSUGGESTS_${PN} = "tetex"
RDEPENDS_${PN} = "python-shell python-textutils"
PR = "r1"

SRC_URI = "\
  ftp://ftp.lyx.org/pub/lyx/stable/1.6.x/lyx-${PV}.tar.bz2 \
  file://no-session-manager.patch \
  file://qt4tools-detect.diff \
"

inherit qt4x11 autotools

EXTRA_OECONF = "\
  --with-qt4-dir=${QTDIR} \
  --enable-threads=posix \
"

do_configure_prepend() {
	rm -f ${S}/config/libtool.m4
}

EXTRA_QMAKEVARS_POST = "DEFINES+=_LIBC"
PARALLEL_MAKE = ""

SRC_URI[md5sum] = "c1a0da5aee3b7e1a2f74e8018805c7b1"
SRC_URI[sha256sum] = "56f3120f814de0fc55866d92b08b2513ad0d0532fc6675aeaf36154eb73c403b"

repository: overo/overo-oe-natty

repo_name: overo/overo-oe-natty

branch_name: HEAD


text:
DESCRIPTION = "Linux kernel with BigEndian support for Seattle SoC, AMD 64bit ARMv8 Cortex-A57"

require linux-seattle.inc

SRCREV = "e152349de59b43b2a75f2c332b44171df461d5a0"
SRC_URI = "git://git.yoctoproject.org/linux-yocto-3.19;branch="standard/qemuarm64" \
           file://01-arm64-boot-BE-kernels-from-UEFI.patch \
           file://02-319-Enable-32-bit-EL0-with-64K-and-4K-page-s.patch \
           file://03-arm64-don-t-set-READ_IMPLIES_EXEC-for-EM_AARCH64-ELF.patch \
           file://319-Update-xgbe-drivers-for-B0-board.patch \
           file://defconfig \
           "
SRC_URI_append_seattle-be = "file://bigendian.cfg \
                            "

INSANE_SKIP_${PN} += "installed-vs-shipped"
INSANE_SKIP_kernel-dev += "debug-files"
INSANE_SKIP_kernel-dev += "arch"


text:
@misc{HTTP,
  author = {{MDN contributors}},
  title = {{HTTP | MDN}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://developer.mozilla.org/en-US/docs/Web/HTTP}
}

@misc{RESTArch,
  author = {{Fielding, Roy Thomas}},
  title = {{Fielding Dissertation: CHAPTER 5: Representational State Transfer (REST)}},
  year = {2000},
  note = {{Last accessed 2 October 2021}},
  url = {https://www.ics.uci.edu/~fielding/pubs/dissertation/rest_arch_style.htm}
}

@misc{RESTEvaluation,
  author = {{Fielding, Roy Thomas}},
  title = {{Fielding Dissertation: CHAPTER 6: Experience and Evaluation}},
  year = {2000},
  note = {{Last accessed 2 October 2021}},
  url = {https://www.ics.uci.edu/~fielding/pubs/dissertation/evaluation.htm}
}

@misc{RESTRFC,
  author = {{Fielding, Roy Thomas}},
  title = {{Hypertext Transfer Protocol (HTTP/1.1): Semantics and Content, Section 4}},
  year = {2014},
  note = {{Last accessed 2 October 2021}},
  url = {https://datatracker.ietf.org/doc/html/rfc7231#section-4}
}

@misc{Git,
  author = {{Software Freedom Conservancy}},
  title = {{Git}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://git-scm.com/}
}

@misc{Container,
  author = {{Docker Inc.}},
  title = {{What is a Container? | App Containerization | Docker}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://www.docker.com/resources/what-container}
}

@misc{Docker,
  author = {{Docker Inc.}},
  title = {{Empowering App Development for Developers | Docker}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://www.docker.com/}
}

@misc{SwarmOverview,
  author = {{Docker Inc.}},
  title = {{Swarm mode overview | Docker Documentation}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://docs.docker.com/engine/swarm/}
}

@misc{SwarmConcepts,
  author = {{Docker Inc.}},
  title = {{Swarm mode key concepts | Docker Documentation}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://docs.docker.com/engine/swarm/key-concepts/}
}

@misc{Hadoop,
  author = {{Apache Software Foundation}},
  title = {{Apache Hadoop}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://hadoop.apache.org/}
}

@misc{HDFS,
  author = {{Dhruba Borthakur}},
  title = {{HDFS Architecture Guide}},
  year = {2020},
  note = {{Last accessed 3 October 2021}},
  url = {https://hadoop.apache.org/docs/r1.2.1/hdfs_design.html}
}

@misc{Hive,
  author = {{Liquan Pei}},
  title = {{Home - Apache Hive - Apache Software Foundation}},
  year = {2020},
  note = {{Last accessed 3 October 2021}},
  url = {https://hive.apache.org/}
}

@misc{Impala,
  author = {{Apache Software Foundation}},
  title = {{Impala}},
  year = {2021},
  note = {{Last accessed 3 October 2021}},
  url = {https://impala.apache.org/overview.html.apache.org/}
}

@misc{ImpalaPaper,
  author = {{Cloudera}},
  title = {{Impala: A Modern, Open-Source SQL Engine for Hadoop}},
  year = {2015},
  note = {{Last accessed 3 October 2021}},
  url = {https://impala.apache.org/overview.html.apache.org/}
}

@misc{Postgres,
  author = {{The PostgreSQL Global Development Group}},
  title = {{PostgreSQL: About}},
  year = {2021},
  note = {{Last accessed 3 October 2021}},
  url = {https://hive.apache.org/}
}

@misc{MSSQL,
  author = {{Kellyn Gorman, Dave Noderer, James Rowland-Jones, Arun Sirpal, Dustin Ryan, Buck Woody}},
  title = {{Introducing Microft SQL Server 2019}},
  year = {2019},
  note = {{Last accessed 9 October 2021}},
  url = {https://clouddamcdnprodep.azureedge.net/gdc/gdcJivzXl/original}
}

@misc{Kafka,
  author = {{Apache Software Foundation}},
  title = {{Apache Kafka}},
  year = {2021},
  note = {{Last accessed 9 October 2021}},
  url = {https://kafka.apache.org/}
}

@misc{Elasticsearch,
  author = {{Elasticsearch B.V.}},
  title = {{Elasticsearch: The Official Distributed Search \& Analytics Engine | Elastic}},
  year = {2021},
  note = {{Last accessed 9 October 2021}},
  url = {https://www.elastic.co/elasticsearch/}
}

@misc{Kibana,
  author = {{Elasticsearch B.V.}},
  title = {{Kibana: Explore, Visualize, Discover Data | Elastic}},
  year = {2021},
  note = {{Last accessed 9 October 2021}},
  url = {https://www.elastic.co/kibana/}
}

@misc{Python,
  author = {{Python Software Foundation}},
  title = {{About Python | Python.org}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://www.python.org/about/}
}

@misc{PythonApplication,
  author = {{Python Software Foundation}},
  title = {{Applications for Python | Python.org}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://www.python.org/about/apps/}
}

@misc{JavaScript,
  author = {{MDN contributors}},
  title = {{About JavaScript - JavaScript | MDN}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://developer.mozilla.org/en-US/docs/Web/JavaScript/About_JavaScript}
}

@misc{TypeScript,
  author = {{Microsoft}},
  title = {{TypeScript: JavaScript With Syntax For Types.}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://www.typescriptlang.org/}
}

@misc{Bash,
  author = {{Ryan Chadwick}},
  title = {{What is a Bash Script? - Bash Scripting Tutorial}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://ryanstutorials.net/bash-scripting-tutorial/bash-script.php}
}

@misc{Click,
  author = {{Pallets}},
  title = {{Welcome to Click — Click Documentation (8.0.x)}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://fastapi.tiangolo.com/}
}

@misc{FastAPI,
  author = {{tiangolo}},
  title = {{FastAPI}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://fastapi.tiangolo.com/}
}

@misc{React,
  author = {{Facebook Inc.}},
  title = {{Getting Started - React}},
  year = {2021},
  note = {{Last accessed 2 October 2021}},
  url = {https://reactjs.org/docs/getting-started.html}
}

@misc{Tailwind,
  author = {{tailwindlabs}},
  title = {{Tailwind CSS - Rapidly build modern websites without ever leaving your HTML}},
  year = {2021},
  note = {{Last accessed 3 October 2021}},
  url = {https://tailwindcss.com/}
}

@misc{GitHub,
  author = {{GitHub, Inc.}},
  title = {{Features | GitHub}},
  year = {2021},
  note = {{Last accessed 3 October 2021}},
  url = {https://github.com/features}
}

@misc{Hue,
  author = {{Priyankaa Arunachalam}},
  title = {{Diving into Big Data: Hadoop User Experience - Alibaba Cloud Community}},
  year = {2019},
  note = {{Last accessed 3 October 2021}},
  url = {https://www.alibabacloud.com/blog/diving-into-big-data-hadoop-user-experience_595322}
}

@misc{DBeaver,
  author = {{DBeaver Contributors}},
  title = {{About | DBeaver Community}},
  year = {2021},
  note = {{Last accessed 5 October 2021}},
  url = {https://dbeaver.io/about/}
}

repository: gearprn/IT-KMITL-Latex

repo_name: gearprn/IT-KMITL-Latex


text:
@conference{Fitzgerald2011,
 abstract = {In this article, the authors examine two computational approaches that can be used to study the motions of flexible flapping systems.  For illustration, a fully coupled interaction of a fluid system with a flapping profile performing harmonic flapping kinematics is studied.  In one approach, the fluid model is based on the Navier-Stokes equations for viscous incompressible flow, where all spatio-temporal scales are directly resolved by means of Direct Numerical Simulation (DNS).  In the other approach, the fluid model is an inviscid, potential flow model, based on the unsteady vortex lattice method (UVLM).  In the UVLM model, the focus is on vortex structures and the fluid dynamics is treated as a problem of vortex kinematics, whereas with the DNS model, the focus is on forming a detailed picture of the flapping physics.  The UVLM base approach, although coarse from a modeling standpoint, is computationally inexpensive compared to the DNS based approach.  This comparative study is motivated by the hypothesis that flapping related phenomena are primarily determined by vortex interactions and viscous effects play a secondary role, which could mean that a UVLM based approach could be suitable for design purposes and/or constructing a predictive tool.  In most of the cases studies in this work, the UVLM base approach produces a good approximation to CL/CD.  Apart from comparisons of the aerodynamic loads, comparisons are also made of th features of the system dynamics generated by using the two computational approaches.  Limitations of both approaches are also discussed.},
 address = {Orlando, Florida},
 author = {T. Fitzgerald and M. Valdez and B. Balachandran},
 booktitle = {49th AIAA Aerospace Sciences Meeting},
 doi = {10.2514/6.2011-1115},
 month = {January 4--7},
 number = {2011-1115},
 owner = {tim},
 timestamp = {2011.04.18},
 title = {A comparison of computational models for fluid-structure interaction of flexible flapping wing systems},
 year = {2011}
}

repository: tfitz/academic-kickstart

repo_name: tfitz/academic-kickstart


text:
SUMMARY = "Shared OpenPOWER configuration"
PR = "r1"
LICENSE = "Apache-2.0"
LIC_FILES_CHKSUM = "file://${COREBASE}/meta/files/common-licenses/Apache-2.0;md5=89aea4e17d99a7cacdbeed46a0096b10"

inherit allarch

SRC_URI = " \
    file://ipmi-fru-properties-mrw.yaml \
    file://ipmi-hostboot-fru-mrw.yaml \
    file://ipmi-hostboot-volatile-sensor-mrw.yaml \
    file://ipmi-occ-active-sensor-mrw.yaml \
    "

S = "${WORKDIR}"

do_install() {
    install -m 0644 -D ipmi-fru-properties-mrw.yaml \
        ${D}${datadir}/${BPN}/ipmi-fru-properties-mrw.yaml
    install -m 0644 -D ipmi-hostboot-fru-mrw.yaml \
        ${D}${datadir}/${BPN}/ipmi-hostboot-fru-mrw.yaml
    install -m 0644 -D ipmi-hostboot-volatile-sensor-mrw.yaml \
        ${D}${datadir}/${BPN}/ipmi-hostboot-volatile-sensor-mrw.yaml
    install -m 0644 -D ipmi-occ-active-sensor-mrw.yaml \
        ${D}${datadir}/${BPN}/ipmi-occ-active-sensor-mrw.yaml
}

FILES:${PN}-dev = " \
    ${datadir}/${BPN}/ipmi-fru-properties-mrw.yaml \
    ${datadir}/${BPN}/ipmi-hostboot-fru-mrw.yaml \
    ${datadir}/${BPN}/ipmi-hostboot-volatile-sensor-mrw.yaml \
    ${datadir}/${BPN}/ipmi-occ-active-sensor-mrw.yaml \
    "

ALLOW_EMPTY:${PN} = "1"

repository: openbmc/openbmc

repo_name: openbmc/openbmc

gha_language: Python


text:
@article{pmid31754640,
 abstract = {Bacterial ClpP is a highly conserved, cylindrical, self-compartmentalizing serine protease required for maintaining cellular proteostasis. Small molecule acyldepsipeptides (ADEPs) and activators of self-compartmentalized proteases 1 (ACP1s) cause dysregulation and activation of ClpP, leading to bacterial cell death, highlighting their potential use as novel antibiotics. Structural changes in Neisseria meningitidis and Escherichia coli ClpP upon binding to novel ACP1 and ADEP analogs were probed by X-ray crystallography, methyl-TROSY NMR, and small angle X-ray scattering. ACP1 and ADEP induce distinct conformational changes in the ClpP structure. However, reorganization of electrostatic interaction networks at the ClpP entrance pores is necessary and sufficient for activation. Further activation is achieved by formation of ordered N-terminal axial loops and reduction in the structural heterogeneity of the ClpP cylinder. Activating mutations recapitulate the structural effects of small molecule activator binding. Our data, together with previous findings, provide a structural basis for a unified mechanism of compound-based ClpP activation.},
 author = {Mark F Mabanglo and Elisa Leung and Siavash Vahidi and Thiago V Seraphim and Bryan T Eger and Steve Bryson and Vaibhav Bhandari and Jin Lin Zhou and Yu-Qian Mao and Kamran Rizzolo and Marim M Barghash and Jordan D Goodreid and Sadhna Phanse and Mohan Babu and Leandro R S Barbosa and Carlos H I Ramos and Robert A Batey and Lewis E Kay and Emil F Pai and Walid A Houry},
 doi = {10.1038/s42003-019-0656-3},
 journal = {Commun Biol},
 nlmuniqueid = {101719179},
 pages = {410},
 pii = {656},
 pmc = {PMC6853987},
 pubmed = {31754640},
 title = {ClpP protease activation results from the reorganization of the electrostatic interaction networks at the entrance pores.},
 volume = {2},
 year = {2019}
}

repository: zqzneptune/BabuLab

repo_name: zqzneptune/BabuLab


text:
DESCRIPTION = "The Debian Almquist Shell is a POSIX compliant shell that is much smaller than 'bash'."
PROVIDES = "virtual/sh"
LICENSE = "BSD GPL"

SRC_URI = "http://ftp.debian.org/debian/pool/main/d/dash/dash_${PV}.orig.tar.gz;name=archive \
	https://launchpad.net/debian/sid/+source/dash/0.5.5.1-2.3/+files/dash_${PV}-2.3.diff.gz;name=patch \
	file://makefile-build-cc.diff"

SRC_URI[archive.md5sum] = "7ac832b440b91f5a52cf8eb68e172616"
SRC_URI[archive.sha256sum] = "1c6717a1014c73aa16bc78a4767f1e00b40ff2a01a6c2cf2cce9a5335c24493f"
SRC_URI[patch.md5sum] = "be9cf0b148f4127d06cede66241175c0"
SRC_URI[patch.sha256sum] = "afa02603f39a9557c65f88702f41190fa69e41ebe5d7729b4a52ab04573539c5"

inherit autotools

bindir = "/bin"
PREFIX="${bindir}"

# dont use update-alternatives class because since we are dealing with /bin/sh
# we need to do the remove in pkg_prerm where the /bin/sh link still points
# to something (postrm is a shell script)

ALTERNATIVE_NAME = "sh"
ALTERNATIVE_PATH = "${bindir}/dash"
ALTERNATIVE_PRIORITY = "10"
ALTERNATIVE_LINK = "${bindir}/${ALTERNATIVE_NAME}"

pkg_postinst() {
update-alternatives --install ${ALTERNATIVE_LINK} ${ALTERNATIVE_NAME} ${ALTERNATIVE_PATH} ${ALTERNATIVE_PRIORITY}
}

pkg_prerm() {
update-alternatives --remove ${ALTERNATIVE_NAME} ${ALTERNATIVE_PATH}
}


text:
DESCRIPTION = "Torrent client"
HOMEPAGE = "http://libtorrent.rakshasa.no/"
LICENSE = "GPL-2.0"
LIC_FILES_CHKSUM = "file://COPYING;md5=94d55d512a9ba36caa9b7df079bae19f"

DEPENDS = "libsigc++-2.0 curl cppunit libtorrent"

SRC_URI = "http://libtorrent.rakshasa.no/downloads/${PN}-${PV}.tar.gz \
    file://don-t-run-code-while-configuring-package.patch \
"

SRC_URI[md5sum] = "0bf2f262faa8c8c8d3b11ce286ea2bf2"
SRC_URI[sha256sum] = "9e93ca41beb1afe74ad7ad8013e0d53ae3586c9b0e97263d722f721535cc7310"

inherit autotools

repository: ExorEmbedded/exor-workspace

repo_name: ExorEmbedded/exor-workspace


text:
require xorg-proto-common.inc

SUMMARY = "Xdamage: X Damage extension headers"

DESCRIPTION = "This package provides the wire protocol for the DAMAGE \
extension.  The DAMAGE extension allows applications to receive \
information about changes made to pixel contents of windows and \
pixmaps."

LICENSE = "MIT-style"
LIC_FILES_CHKSUM = "file://COPYING;md5=d5f5a2de65c3a84cbde769f07a769608 \
                    file://damagewire.h;endline=23;md5=4a4501a592dbc7de5ce89255e50d0296"

RCONFLICTS_${PN} = "damageext"
BBCLASSEXTEND = "native"
PR = "r1"
PE = "1"

SRC_URI[md5sum] = "998e5904764b82642cc63d97b4ba9e95"
SRC_URI[sha256sum] = "5c7c112e9b9ea8a9d5b019e5f17d481ae20f766cb7a4648360e7c1b46fc9fc5b"

#
# debian
#
inherit debian-package
DEBIAN_SECTION = "x11"
DPR = "0"
DPN = "x11proto-damage"

# There is no debian patch
DEBIAN_PATCH_TYPE = "nopatch"

repository: takuya-t/meta-debian

repo_name: takuya-t/meta-debian

branch_name: refs/heads/daisy


text:
%Articles
@article{exact_distributions_guhr,
	doi = {10.1088/1751-8121/abe3c8},
	url = {https://doi.org/10.1088/1751-8121/abe3c8},
	year = {2021},
	month = {mar},
	publisher = {{IOP} Publishing},
	volume = {54},
	number = {12},
	pages = {125002},
	author = {Thomas Guhr and Andreas Schell},
	title = {Exact multivariate amplitude distributions for non-stationary
           Gaussian or algebraic fluctuations of covariances or correlations},
	journal = {Journal of Physics A: Mathematical and Theoretical},
}

@article{portfolio_distributions_guhr,
  author = {Desislava Chetalova and Thilo A. Schmitt and Rudi Schäfer and
            Thomas Guhr},
  title = {Portfolio return distributions: Sample statistics with stochastic
           correlations},
  journal = {International Journal of Theoretical and Applied Finance},
  volume = {18},
  number = {02},
  pages = {1550012},
  year = {2015},
  doi = {10.1142/S0219024915500120},
  URL = {https://doi.org/10.1142/S0219024915500120 },
  eprint = {https://doi.org/10.1142/S0219024915500120}
}

@article{non_stationarity_fin_guhr,
	doi = {10.1209/0295-5075/103/58003},
	url = {https://doi.org/10.1209/0295-5075/103/58003},
	year = {2013},
	month = {sep},
	publisher = {{IOP} Publishing},
	volume = {103},
	number = {5},
	pages = {58003},
	author = {Thilo A. Schmitt and Desislava Chetalova and Rudi Schäfer and
            Thomas Guhr},
	title = {Non-stationarity in financial time series: Generic features and tail
           behavior},
	journal = {{EPL} (Europhysics Letters)},
}

@article{credit_risk_guhr,
	doi = {10.1209/0295-5075/105/38004},
	url = {https://doi.org/10.1209/0295-5075/105/38004},
	year = {2014},
	month = {feb},
	publisher = {{IOP} Publishing},
	volume = {105},
	number = {3},
	pages = {38004},
	author = {Thilo A. Schmitt and Desislava Chetalova and Rudi Schäfer and
            Thomas Guhr},
	title = {Credit risk and the instability of the financial system: An ensemble
           approach},
	journal = {{EPL} (Europhysics Letters)},
}

@article{univariate_non_stationarity_guhr,
  title = {Compounding approach for univariate time series with nonstationary
           variances},
  author = {Rudi Schäfer and Sonja Barkhofen and Thomas Guhr and Hans-Jürgen
            Stöckmann and Ulrich Kuhl},
  journal = {Phys. Rev. E},
  volume = {92},
  issue = {6},
  pages = {062901},
  numpages = {7},
  year = {2015},
  month = {Dec},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevE.92.062901},
  url = {https://link.aps.org/doi/10.1103/PhysRevE.92.062901}
}

@article{stochastic_cov_guhr,
	doi = {10.1088/1742-5468/2015/11/p11025},
	url = {https://doi.org/10.1088/1742-5468/2015/11/p11025},
	year = {2015},
	month = {nov},
	publisher = {{IOP} Publishing},
	volume = {2015},
	number = {11},
	pages = {P11025},
	author = {Frederik Meudt and Martin Theissen and Rudi Schäfer and Thomas
            Guhr},
	title = {Constructing analytically tractable ensembles of stochastic
           covariances with an application to financial data},
	journal = {Journal of Statistical Mechanics: Theory and Experiment},
}

@article{asset_correlations_guhr,
author = {Thilo Schmitt and Rudi Schäfer and Thomas Guhr},
title = {Credit Risk: Taking Fluctuating Asset Correlations into Account},
journal = {Journal of Credit Risk},
volume = {11},
number = {3},
url = {https://ssrn.com/abstract=2795524},
year = {2015}
}

@article{volatility_change,
author = {William G. Schwert},
title = {Why Does Stock Market Volatility Change Over Time?},
journal = {The Journal of Finance},
volume = {44},
number = {5},
pages = {1115-1153},
year = {1989},
doi = {https://doi.org/10.1111/j.1540-6261.1989.tb02647.x},
}

@article{subtle_nature,
    author = {Bouchaud,Jean-Philippe},
    title = {The subtle nature of financial random walks},
    journal = {Chaos: An Interdisciplinary Journal of Nonlinear Science},
    volume = {15},
    number = {2},
    pages = {026104},
    year = {2005},
    doi = {10.1063/1.1889265},
    URL = {https://doi.org/10.1063/1.1889265},
    eprint = {https://doi.org/10.1063/1.1889265}
}

@article{empirical_facts,
    author = {Chakraborti, Anirban and Toke, Ioane and Patriarca, Marco and
              Abergel, Frédéric},
    year = {2009},
    month = {09},
    pages = {},
    title = {Econophysics: Empirical facts and agent-based models},
    journal = {arXiv.org, Quantitative Finance Papers}
}

@article{my_paper_response_financial,
  title = {Price response functions and spread impact in correlated financial
           markets},
  author = {Juan C. Henao-Londono and Sebastian M. Krause and Thomas Guhr},
  year = {2021},
  month = {04},
  day = {08},
  journal = {The European Physical Journal B},
  volume = {94},
  number = {4},
  doi = {10.1140/epjb/s10051-021-00077-z},
  url = {https://doi.org/10.1140/epjb/s10051-021-00077-z},
  issn = {1434-6036},
}

@article{comp_sys_1,
  title = {Recurrence Time Statistics for Chaotic Systems and Their
           Applications},
  author = {Gao, J. B.},
  journal = {Phys. Rev. Lett.},
  volume = {83},
  issue = {16},
  pages = {3178--3181},
  numpages = {0},
  year = {1999},
  month = {Oct},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevLett.83.3178},
  url = {https://link.aps.org/doi/10.1103/PhysRevLett.83.3178}
}

@article{comp_sys_2,
  title = {Coping with Nonstationarity by Overembedding},
  author = {Rainer Hegger and Holger Kantz and Lorenzo Matassini and Thomas
            Schreiber},
  journal = {Phys. Rev. Lett.},
  volume = {84},
  issue = {18},
  pages = {4092--4095},
  numpages = {0},
  year = {2000},
  month = {May},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevLett.84.4092},
  url = {https://link.aps.org/doi/10.1103/PhysRevLett.84.4092}
}

@article{comp_sys_3,
  title = {Scale Invariance in the Nonstationarity of Human Heart Rate},
  author = {Pedro Bernaola-Galv\'an and Plamen Ch. Ivanov and
            Lu\'{\i}s A. Nunes Amaral and H. Eugene Stanley},
  journal = {Phys. Rev. Lett.},
  volume = {87},
  issue = {16},
  pages = {168105},
  numpages = {4},
  year = {2001},
  month = {Oct},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevLett.87.168105},
  url = {https://link.aps.org/doi/10.1103/PhysRevLett.87.168105}
}

@article{comp_sys_4,
  title = {Measuring Nonstationarity by Analyzing the Loss of Recurrence in
           Dynamical Systems},
  author = {Christoph Rieke and Karsten Sternickel and Ralph G. Andrzejak and
            Christian E. Elger and Peter David and Klaus Lehnertz},
  journal = {Phys. Rev. Lett.},
  volume = {88},
  issue = {24},
  pages = {244102},
  numpages = {4},
  year = {2002},
  month = {May},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevLett.88.244102},
  url = {https://link.aps.org/doi/10.1103/PhysRevLett.88.244102}
}

@article{non_stat_1,
	doi = {10.1088/0305-4470/37/19/003},
	url = {https://doi.org/10.1088/0305-4470/37/19/003},
	year = {2004},
	month = {apr},
	publisher = {{IOP} Publishing},
	volume = {37},
	number = {19},
	pages = {5135--5155},
	author = {R K P Zia and Per Arne Rikvold},
	title = {Fluctuations and correlations in an individual-based model of
           biological coevolution},
	journal = {Journal of Physics A: Mathematical and General},
}

@article{non_stat_2,
	doi = {10.1088/0305-4470/39/24/l04},
	url = {https://doi.org/10.1088/0305-4470/39/24/l04},
	year = {2006},
	month = {may},
	publisher = {{IOP} Publishing},
	volume = {39},
	number = {24},
	pages = {L407--L413},
	author = {R K P Zia and B Schmittmann},
	title = {A possible classification of nonequilibrium steady states},
	journal = {Journal of Physics A: Mathematical and General},
}

@article{state_crisis_1,
 title = {Time-Varying World Market Integration},
 author = {Geert Bekaert and Campbell R. Harvey},
 ISSN = {00221082, 15406261},
 journal = {The Journal of Finance},
 number = {2},
 pages = {403--444},
 publisher = {[American Finance Association, Wiley]},
 volume = {50},
 year = {1995},
 URL = {http://www.jstor.org/stable/2329414},
}

@article{state_crisis_2,
 title = {Is the correlation in international equity returns constant:
          1960–1990?},
 author = {François Longin and Bruno Solnik},
 journal = {Journal of International Money and Finance},
 volume = {14},
 number = {1},
 pages = {3-26},
 year = {1995},
 issn = {0261-5606},
 doi = {https://doi.org/10.1016/0261-5606(94)00001-H},
 url = {https://www.sciencedirect.com/science/article/pii/026156069400001H},
}

@article{state_crisis_3,
  title = {Dynamics of market correlations: Taxonomy and portfolio analysis},
  author = {J.-P. Onnela and A. Chakraborti and K. Kaski and J. Kert\'esz
            and A. Kanto},
  journal = {Phys. Rev. E},
  volume = {68},
  issue = {5},
  pages = {056110},
  numpages = {12},
  year = {2003},
  month = {Nov},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevE.68.056110},
  url = {https://link.aps.org/doi/10.1103/PhysRevE.68.056110}
}

@article{state_crisis_4,
title = {Will the US economy recover in 2010? A minimal spanning tree study},
journal = {Physica A: Statistical Mechanics and its Applications},
author = {Yiting Zhang and Gladys Hui Ting Lee and Jian Cheng Wong and
          Jun Liang Kok and Manamohan Prusty and Siew Ann Cheong},
volume = {390},
number = {11},
pages = {2020-2050},
year = {2011},
issn = {0378-4371},
doi = {https://doi.org/10.1016/j.physa.2011.01.020},
url = {https://www.sciencedirect.com/science/article/pii/S0378437111000847},
}

@article{state_crisis_5,
  title = {Evolution of worldwide stock markets, correlation structure, and
           correlation-based graphs},
  author = {Dong-Ming Song and Michele Tumminello and Wei-Xing Zhou and
            Rosario N. Mantegna},
  journal = {Phys. Rev. E},
  volume = {84},
  issue = {2},
  pages = {026108},
  numpages = {9},
  year = {2011},
  month = {Aug},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevE.84.026108},
  url = {https://link.aps.org/doi/10.1103/PhysRevE.84.026108}
}

@article{state_crisis_6,
title = {Correlation of financial markets in times of crisis},
journal = {Physica A: Statistical Mechanics and its Applications},
author = {Leonidas Sandoval and Italo De Paula Franca},
volume = {391},
number = {1},
pages = {187-208},
year = {2012},
issn = {0378-4371},
doi = {https://doi.org/10.1016/j.physa.2011.07.023},
url = {https://www.sciencedirect.com/science/article/pii/S037843711100570X},
}

@article{state_crisis_7,
title = {Identifying States of a Financial Market},
journal = {Scientific Reports},
author = {Michael C. Münnix and Takashi Shimada and Rudi Schäfer
          and Francois Leyvraz and Thomas H. Selgman and Thomas Guhr
          and H. Eugene Stanley},
volume = {2},
year = {2012},
issn = {2045-2322},
doi = {10.1038/srep00644},
url = {https://doi.org/10.1038/srep00644},
}

@article{random_matrix_1,
title = {Random-matrix theories in quantum physics: common concepts},
author = {Thomas Guhr and Axel Müller–Groeling and Hans A. Weidenmüller},
journal = {Physics Reports},
volume = {299},
number = {4},
pages = {189-425},
year = {1998},
issn = {0370-1573},
doi = {https://doi.org/10.1016/S0370-1573(97)00088-4},
url = {https://www.sciencedirect.com/science/article/pii/S0370157397000884},
}

@article{wishart,
 title = {The Generalised Product Moment Distribution in Samples from a Normal
          Multivariate Population},
 author = {John Wishart},
 ISSN = {00063444},
 URL = {http://www.jstor.org/stable/2331939},
 journal = {Biometrika},
 number = {1/2},
 pages = {32--52},
 publisher = {[Oxford University Press, Biometrika Trust]},
 volume = {20A},
 year = {1928}
}

@article{matrix_fin_02,
  title = {Noise Dressing of Financial Correlation Matrices},
  author = {Laurent Laloux and Pierre Cizeau and Jean-Philippe Bouchaud and
            Marc Potters},
  journal = {Phys. Rev. Lett.},
  volume = {83},
  issue = {7},
  pages = {1467--1470},
  numpages = {0},
  year = {1999},
  month = {Aug},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevLett.83.1467},
  url = {https://link.aps.org/doi/10.1103/PhysRevLett.83.1467}
}

@article{matrix_fin_03,
author = {Laurent Laloux and Pierre Cizeau and Marc Potters
          and Jean-Philippe Bouchaud},
 title = {Random Matrix Theory and Financial Correlations},
 journal = {International Journal of Theoretical and Applied Finance},
 volume = {03},
 number = {03},
 pages = {391-397},
 year = {2000},
 doi = {10.1142/S0219024900000255},
 URL = {https://doi.org/10.1142/S0219024900000255},
 eprint = {https://doi.org/10.1142/S0219024900000255},
}

@article{matrix_fin_04,
  title = {Universal and Nonuniversal Properties of Cross Correlations in
           Financial Time Series},
  author = {Vasiliki Plerou and Parameswaran Gopikrishnan and Bernd Rosenow
            and Lu\'{\i}s A. Nunes Amaral and H. Eugene Stanley},
  journal = {Phys. Rev. Lett.},
  volume = {83},
  issue = {7},
  pages = {1471--1474},
  numpages = {0},
  year = {1999},
  month = {Aug},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevLett.83.1471},
  url = {https://link.aps.org/doi/10.1103/PhysRevLett.83.1471}
}

@article{matrix_fin_05,
  title = {Random matrix approach to cross correlations in financial data},
  author = {Vasiliki Plerou and Parameswaran Gopikrishnan and Bernd Rosenow
            and Lu\'{\i}s A. Nunes Amaral and Thomas Guhr
            and H. Eugene Stanley},
  journal = {Phys. Rev. E},
  volume = {65},
  issue = {6},
  pages = {066126},
  numpages = {18},
  year = {2002},
  month = {Jun},
  publisher = {American Physical Society},
  doi = {10.1103/PhysRevE.65.066126},
  url = {https://link.aps.org/doi/10.1103/PhysRevE.65.066126}
}

@article{matrix_fin_06,
title = {Estimated correlation matrices and portfolio optimization},
author = {Szilárd Pafka and Imre Kondor},
journal = {Physica A: Statistical Mechanics and its Applications},
volume = {343},
pages = {623-634},
year = {2004},
issn = {0378-4371},
doi = {https://doi.org/10.1016/j.physa.2004.05.079},
url = {https://www.sciencedirect.com/science/article/pii/S0378437104007447},
}

@article{matrix_fin_07,
title = {Financial Applications of Random Matrix Theory: Old Laces and New
         pieces},
author = {M. Potters and J.-P. Bouchaud and L. Laloux},
journal = {Acta Physica Polonica Series B},
volume = {B35},
pages = {2767-2784},
year = {2005},
issn = {0587-4254},
url = {http://inis.iaea.org/search/search.aspx?orig_q=RN:36100087},
}

@article{matrix_fin_08,
title = {Empirics Versus RMT in Financial Cross-Correlations},
author = {S. Drozdz and J. Kwapien and P. Oswiecimka},
journal = {Acta Physica Polonica Series B},
volume = {B39},
pages = {4027-4039},
year = {2008},
issn = {0587-4254},
url = {http://inis.iaea.org/search/search.aspx?orig_q=RN:39016403},
}

@article{matrix_fin_09,
title = {The bulk of the stock market correlation matrix is not pure noise},
author = {J. Kwapień and S. Drożdż and P. Oświecimka},
journal = {Physica A: Statistical Mechanics and its Applications},
volume = {359},
pages = {589-606},
year = {2006},
issn = {0378-4371},
doi = {https://doi.org/10.1016/j.physa.2005.05.090},
url = {https://www.sciencedirect.com/science/article/pii/S0378437105005716},
}

@article{matrix_fin_10,
title = {The Student Ensemble of Correlation Matrices: Eigenvalue Spectrum and
         and Kullback-Leibler Entropy},
author = {G. Biroli and J.-P. Bouchaud M. Potters},
journal = {Acta Physica Polonica Series B},
volume = {B39},
pages = {4009-4026},
year = {2008},
issn = {0587-4254},
url = {http://inis.iaea.org/search/search.aspx?orig_q=RN:39016402},
}

@article{matrix_fin_11,
title = {Free Lévy matrices and financial correlations},
author = {Zdzisław Burda and Jerzy Jurkiewicz and Maciej A. Nowak and
          Gabor Papp and Ismail Zahed},
journal = {Physica A: Statistical Mechanics and its Applications},
volume = {343},
pages = {694-700},
year = {2004},
issn = {0378-4371},
doi = {https://doi.org/10.1016/j.physa.2004.05.049},
url = {https://www.sciencedirect.com/science/article/pii/S0378437104007186},
}

@article{matrix_fin_12,
    author = {G. Akemann and P. Vivo},
    title = {Power law deformation of Wishart-Laguerre ensembles of random
              matrices},
    eprint = {0806.1861},
    archivePrefix = {arXiv},
    primaryClass = {math-ph},
    doi = {10.1088/1742-5468/2008/09/P09002},
    journal = {J. Stat. Mech.},
    volume = {0809},
    pages = {P09002},
    year = {2008}
}

@article{matrix_fin_13,
author = {Zdzisław Burda and Andrzej Jarosz and Maciej A. Nowak and
          Jerzy Jurkiewicz and Gábor Papp and Ismail Zahed},
title = {Applying free random variables to random matrix analysis of financial
         data. Part I: The Gaussian case},
journal = {Quantitative Finance},
volume = {11},
number = {7},
pages = {1103-1124},
year  = {2011},
publisher = {Routledge},
doi = {10.1080/14697688.2010.484025},
URL = {https://doi.org/10.1080/14697688.2010.484025},
eprint = {https://doi.org/10.1080/14697688.2010.484025}
}

@article{Heckens_2020,
	doi = {10.1088/1742-5468/abb6e2},
	url = {https://doi.org/10.1088/1742-5468/abb6e2},
	year = 2020,
	month = {oct},
	publisher = {{IOP} Publishing},
	volume = {2020},
	number = {10},
	pages = {103402},
	author = {Anton J Heckens and Sebastian M Krause and Thomas Guhr},
	title = {Uncovering the dynamics of correlation structures relative to the collective market motion},
	journal = {Journal of Statistical Mechanics: Theory and Experiment},
}

@article{local_normalization,
author = {Rudi Schäfer and Thomas Guhr},
year = {2010},
month = {09},
pages = {3856-3865},
title = {Local normalization: Uncovering correlations in non-stationary financial time series},
volume = {389},
journal = {Physica A-statistical Mechanics and Its Applications},
doi = {10.1016/j.physa.2010.05.030}
}

%==============================================================================
%Books
@book{random_matrix_2,
    author    = {Madan Lal Mehta},
    title     = {Random Matrices},
    year      = {2004},
    publisher = {Elsevier},
    issn      = {0079-8169},
}

@book{matrix_fin_01,
    author    = {Jean-Philippe Bouchaud and Marc Potters},
    title     = {Thery of Financial Risks, from statistical physics to risk
                 management},
    year      = {2000},
    publisher = {Cambridge University Press},
    isbn      = {0521782325},
}

@book{drawing_dist,
    author    = {James E. Gentle},
    title     = {Computational Statistics},
    publisher = {Springer-Verlag New York},
    year      = {2009},
    page      = {315 - 316},
    doi       = {10.1007/978-0-387-98144-4},
    isbn      = {978-0-387-98143-7},
}

@book{t_student_dist,
  title={Matrix Variate Distributions},
  author={A.K. Gupta and D.K. Nagar},
  isbn={9781584880462},
  lccn={99040291},
  series={Monographs and Surveys in Pure and Applied Mathematics},
  url={https://books.google.de/books?id=PQOYnT7P1loC},
  year={1999},
  publisher={Taylor \& Francis}
}

%==============================================================================
%Doesn't fit in any other type
@misc{r_walks_liquidity,
    title={Random walks, liquidity molasses and critical response in financial
           markets},
    author={J. P. Bouchaud and J. Kockelkoren and M. Potters},
    year={2004},
    eprint={cond-mat/0406224},
    archivePrefix={arXiv},
    primaryClass={cond-mat.other}
}

@Misc{quandl,
author = {Quandl},
howpublished = {\url{https://www.quandl.com/}
                (Online; accessed 5-November-2019)},
note = {The source for financial, economic, and alternative datasets, serving
        investment professionals.}
}

@Misc{quotemedia,
author = {QuoteMedia},
title = {Stock Market Data and Financial Research Solutions},
howpublished = {\url{https://www.quotemedia.com/}},
note = {(Online; accessed 5-November-2019)},
}

@misc{code,
  title={First release - Exact multivariate amplitude distributions in
         correlated financial markets code},
  author={Juan Camilo Henao Londono},
  year={2021},
  version= {v1.0.0},
  doi={10.5281/zenodo.5716382},
  url={https://doi.org/10.5281/zenodo.5716382}
}


text:
DESCRIPTION = "An implementation of the PGM reliable multicast protocol"
HOMEPAGE = "https://code.google.com/archive/p/openpgm/"
LICENSE = "LGPL-2.1+"
LIC_FILES_CHKSUM = "file://COPYING;md5=fbc093901857fcd118f065f900982c24"

FILESEXTRAPATHS_prepend := "${THISDIR}/files:"

SRC_URI = "https://storage.googleapis.com/google-code-archive-downloads/v2/code.google.com/openpgm/${BP}.tar.bz2;name=tarbz"
SRC_URI += "file://openpgm-cross-compile.patch;subdir=${BP}/openpgm/pgm;striplevel=3"
#SRC_URI += "https://git.busybox.net/buildroot/plain/package/openpgm/openpgm-cross-compile.patch?id=ab001acd4c543a41d586d918a1ecf3206678d80b;name=patch;downloadfilename=openpgm-cross-compile.patch;"

SRC_URI[tarbz.md5sum] = "06d6e16bc9064379caf0f8fe979dc785"
SRC_URI[tarbz.sha256sum] = "2f6fcdad7fcf08368bce100db2598abdd57cb1e55869df68c0032a12ffe86d93"
SRC_URI[patch.md5sum] = "de52b68c5748cc2dda4b806db2e35a72"
SRC_URI[patch.sha256sum] = "7588c0e31aea158680a48e343c89daa6877d8e0e2f571645a30dc9797f69bf2a"

inherit autotools

S = "${WORKDIR}/${BP}/openpgm/pgm"

CFLAGS_append = " -std=gnu99 "

EXTRA_OECONF += "\
	ac_cv_file__proc_cpuinfo=yes \
	ac_cv_file__dev_rtc=no \
	ac_cv_file__dev_hpet=no \
	ac_fn_c_try_run=no \
	pgm_unaligned_pointers=no"

do_install() {
	oe_runmake install DESTDIR=${D} SBINDIR=${sbindir} MANDIR=${mandir} INCLUDEDIR=${includedir}
}


text:
require recipes-kernel/linux/linux-yocto.inc

FILESEXTRAPATHS_prepend := "${THISDIR}/${PN}:"

LINUX_VERSION = "3.14"
KBRANCH = "vtss_${LINUX_VERSION}"
KMETA = ""

SRC_URI = "git://github.com/vtss/linux-stable.git;protocol=git;bareclone=1;branch=${KBRANCH}"

SRCREV                = "b04a6112a8001462b0af176f7dc8c934aa77ba2c"
SRCREV_machine        = "b04a6112a8001462b0af176f7dc8c934aa77ba2c"

PR = "r1"
PV = "${LINUX_VERSION}+git${SRCPV}"

SRC_URI_append         =      " file://defconfig"
SRC_URI_append_luton26 =      " file://luton26.scc file://luton26.cfg"
SRC_URI_append_jaguar1 =      " file://jaguar1.scc file://jaguar1.cfg"
SRC_URI_append_jaguar1-dual = " file://jaguar1-dual.scc file://jaguar1-dual.cfg"
SRC_URI_append_serval1 =      " file://serval1.scc file://serval1.cfg"
SRC_URI_append_jaguar2 =      " file://jaguar2.scc file://jaguar2.cfg"
SRC_URI_append_serval2 =      " file://serval2.scc file://serval2.cfg"
SRC_URI_append_servalt =      " file://servalt.scc file://servalt.cfg"

COMPATIBLE_MACHINE = "luton26|jaguar1|jaguar1-dual|serval1|jaguar2|serval2|servalt"

KCONFIG_MODE="--alldefconfig"

kernel_do_deploy_append() {
    pwd
    ls -l
    ${OBJCOPY} -O binary -R .note -R .comment -S vmlinux vmlinux.bin
    xz --check=crc32 --lzma2=preset=6e,dict=64KiB < vmlinux.bin > ${DEPLOYDIR}/vmlinux-${LINUX_VERSION}.${MACHINE}.xz
    rm -f linux.bin
}

repository: ccxtechnologies/meta-vtss-vcoreiii

repo_name: ccxtechnologies/meta-vtss-vcoreiii


text:
package text

import (
	"bytes"

	"github.com/mdp/qrterminal/v3"
	"rsc.io/qr"
)

func GenerateQRCode(text string, redundancyLevel qr.Level) string {
	buffer := bytes.NewBufferString("")
	qrConfig := qrterminal.Config{
		Level:          redundancyLevel,
		Writer:         buffer,
		HalfBlocks:     true,
		BlackChar:      qrterminal.BLACK_BLACK,
		WhiteBlackChar: qrterminal.WHITE_BLACK,
		WhiteChar:      qrterminal.WHITE_WHITE,
		BlackWhiteChar: qrterminal.BLACK_WHITE,
		QuietZone:      2,
	}
	qrterminal.GenerateWithConfig(text, qrConfig)
	return buffer.String()
}

repository: Bios-Marcel/cordless

repo_name: Bios-Marcel/cordless

gha_language: Go


text:
SUMMARY = "OpenBMC - IPMI sensors"
PR = "r1"

inherit native
inherit packagegroup
inherit obmc-phosphor-license

PROVIDES = "${PACKAGES}"

OBMC_IPMI_SENSORS_PROVIDERS = "phosphor-ipmi-sensor-inventory-mrw-config-native"

DEPENDS_append = " ${OBMC_IPMI_SENSORS_PROVIDERS} "


text:
@article{damodaran:hal-02554910,
 author = {Damodaran, Bharath Bhushan and Flamary, Rémi and Seguy, Vivien and Courty, Nicolas},
 doi = {10.1016/j.cviu.2019.102863},
 hal_id = {hal-02554910},
 hal_version = {v1},
 journal = {Computer Vision and Image Understanding},
 month = {February},
 pages = {102863},
 publisher = {Elsevier},
 title = {An Entropic Optimal Transport loss for learning deep neural networks under label noise in remote sensing images},
 url = {https://hal.archives-ouvertes.fr/hal-02554910},
 volume = {191},
 year = {2020}
}

repository: ncourty/academic-kickstart

repo_name: ncourty/academic-kickstart


text:
require util-linux-ng.inc

PR = "r5"
FILESPATH = "${@base_set_filespath([ '${FILE_DIRNAME}/util-linux-ng-2.14', '${FILE_DIRNAME}/files', '${FILE_DIRNAME}' ], d)}"

SRC_URI += "file://util-linux-ng-uclibc-versionsort.patch;patch=1 \
	    file://util-linux-ng-replace-siginterrupt.patch;patch=1 \
	   "
LDFLAGS_append_linux-uclibc = " -lintl"
LDFLAGS_append_linux-uclibcgnueabi = " -lintl "
LDFLAGS_append_uclinux-uclibc = " -lintl"


text:
# - Try to find the libevhtp
# Once done this will define
#
# LIBEVHTP_FOUND - System has libevhtp
# LIBEVHTP_INCLUDE_DIR - the libevhtp include directory
# LIBEVHTP_LIBRARY 0 The library needed to use libevhtp

FIND_PATH(LIBEVHTP_INCLUDE_DIR NAMES evhtp.h PATHS /usr/local/include/evhtp)
FIND_LIBRARY(LIBEVHTP_LIBRARY NAMES evhtp)

INCLUDE(FindPackageHandleStandardArgs)
FIND_PACKAGE_HANDLE_STANDARD_ARGS(libevhtp DEFAULT_MSG LIBEVHTP_LIBRARY LIBEVHTP_INCLUDE_DIR)
MARK_AS_ADVANCED(LIBEVHTP_INCLUDE_DIR LIBEVHTP_LIBRARY)

repository: hand-code/kproxy

repo_name: hand-code/kproxy


text:
@misc{https://doi.org/10.48550/arxiv.2208.13624,
  doi = {10.48550/ARXIV.2208.13624},
  url = {https://arxiv.org/abs/2208.13624},
  author = {Delaunoy, Arnaud and Hermans, Joeri and Rozet, François and Wehenkel, Antoine and Louppe, Gilles},
  keywords = {Machine Learning (stat.ML), Machine Learning (cs.LG), Methodology (stat.ME), FOS: Computer and information sciences, FOS: Computer and information sciences},
  title = {Towards Reliable Simulation-Based Inference with Balanced Neural Ratio Estimation},
  publisher = {arXiv},
  year = {2022},
  copyright = {arXiv.org perpetual, non-exclusive license}
}

repository: montefiore-ai/balanced-nre

repo_name: montefiore-ai/balanced-nre

gha_language: Jupyter Notebook


text:
require('amdefine/intercept');

module.exports = {
    functional: require('./src/functional'),
    stream: require('./src/stream'),
    stream2: require('./src/stream2'),
    reactive: require('./src/reactive'),
    mathematical: require('./src/mathematical'),
    events: require('./src/events'),
    domdiff: require('./src/domdiff')
};

repository: widmogrod/jef

repo_name: widmogrod/jef

extension: js


text:
@article{doi:10.1002/admi.201701596,
author = {Ozutemiz, Kadri Bugra and Wissman, James and Ozdoganlar, Osman Burak and Majidi, Carmel},
title = {EGaIn–Metal Interfacing for Liquid Metal Circuitry and Microelectronics Integration},
journal = {Advanced Materials Interfaces},
volume = {5},
number = {10},
pages = {1701596},
keywords = {eutectic gallium–indium, liquid phase microelectronics, microelectronics component integration, soft electronics, stretchable electronics},
doi = {10.1002/admi.201701596},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/admi.201701596},
eprint = {https://onlinelibrary.wiley.com/doi/pdf/10.1002/admi.201701596},
abstract = {Abstract Eutectic gallium–indium (EGaIn) has attracted significant attention in recent years for its use in soft and stretchable electronics. However, advances in scalable fabrication approaches and effective electromechanical interfaces between liquid metal (LM) traces and microelectronics are still needed to create functional soft and stretchable electronics. In this study, EGaIn–metal interfacing for the effective integration of surface-mount microelectronics with LM interconnects is investigated. The electrical interconnects are produced by creating copper patterns on a soft-elastomer substrate, and subsequently exposing the substrate to EGaIn, which selectively wets the Cu traces. To create strong electromechanical connection between EGaIn and microelectronics, the terminals of the LM-coated traces are “soldered” to the metal pins of the packaged microelectronic circuits using a novel HCl-vapor treatment. In combination, the fabrication and microelectronics-interfacing approaches enable creating stretchable circuits composed of LM wiring and packaged microelectronics. It is found that the HCl-vapor treatment significantly improves electrical conductivity at the LM–pin interface while enhancing the strain limit of the soft circuits and the reproducibility of the interface. The applicability of this approach in creating soft-matter circuits is demonstrated through two illustrative examples—a circuit with a digital 9-axis inertial measurement unit and a temperature sensor; and a circuit with a 3-axis analog accelerometer.},
year = {2018}
}

repository: bozutemiz/academic-theme

repo_name: bozutemiz/academic-theme


text:
@article{BARRETT201569,
 abstract = {Virtual models are increasingly used in science education, especially in spatially demanding domains. However, few studies have directly compared the effectiveness of virtual and concrete models, or systematically characterized differences between them. Here, we compared students' accuracy and efficiency using virtual and concrete models to align and produce different representations in the domain of organic chemistry. Na?ve undergraduate students learned the conventions of different molecular representations (diagrams and models) and then performed tasks that involved matching models to diagrams and using models to complete diagrams. The results indicated similar levels of accuracy for virtual and concrete models and greater efficiency for virtual models. Students preferred virtual models, but rated the usability of the two model types about equally. The efficiency benefit associated with using virtual models can be explained by their constrained interactivity, which prevented students from making task-irrelevant manipulations and increased the salience of the task-relevant information in the models.},
 author = {Trevor J. Barrett and Andrew T. Stull and Ted M. Hsu and Mary Hegarty},
 doi = {https://doi.org/10.1016/j.compedu.2014.09.009},
 issn = {0360-1315},
 journal = {Computers & Education},
 keywords = {Chemistry, Diagrams, Models, Virtual, Constrained interactivity},
 pages = {69 - 81},
 title = {Constrained interactivity for relating multiple representations in science: When virtual is better than real},
 url = {http://www.sciencedirect.com/science/article/pii/S0360131514002097},
 volume = {81},
 year = {2015}
}

repository: t-barrett/academic-kickstart

repo_name: t-barrett/academic-kickstart


text:
@proceedings{ws-2015-international-health,
    title = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    editor = "Grouin, Cyril  and
      Hamon, Thierry  and
      N{\'e}v{\'e}ol, Aur{\'e}lie  and
      Zweigenbaum, Pierre",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2600",
    doi = "10.18653/v1/W15-26",
}
@inproceedings{yim-etal-2015-depth,
    title = "In-depth annotation for patient level liver cancer staging",
    author = "Yim, Wen-wai  and
      Kwan, Sharon  and
      Yetisgen, Meliha",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2601",
    doi = "10.18653/v1/W15-2601",
    pages = "1--11",
}
@inproceedings{sadeque-etal-2015-predicting,
    title = "Predicting Continued Participation in Online Health Forums",
    author = "Sadeque, Farig  and
      Solorio, Thamar  and
      Pedersen, Ted  and
      Shrestha, Prasha  and
      Bethard, Steven",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2602",
    doi = "10.18653/v1/W15-2602",
    pages = "12--20",
}
@inproceedings{dhondt-etal-2015-redundancy,
    title = "Redundancy in {F}rench Electronic Health Records: A preliminary study",
    author = "D{'}hondt, Eva  and
      Tannier, Xavier  and
      N{\'e}v{\'e}ol, Aur{\'e}lie",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2603",
    doi = "10.18653/v1/W15-2603",
    pages = "21--30",
}
@inproceedings{grouin-etal-2015-possible,
    title = "Is it possible to recover personal health information from an automatically de-identified corpus of {F}rench {EHR}s?",
    author = "Grouin, Cyril  and
      Griffon, Nicolas  and
      N{\'e}v{\'e}ol, Aur{\'e}lie",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2604",
    doi = "10.18653/v1/W15-2604",
    pages = "31--39",
}
@inproceedings{cruz-diaz-mana-lopez-2015-analysis,
    title = "An Analysis of Biomedical Tokenization: Problems and Strategies",
    author = "Cruz D{\'\i}az, Noa P.  and
      Ma{\~n}a L{\'o}pez, Manuel",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2605",
    doi = "10.18653/v1/W15-2605",
    pages = "40--49",
}
@inproceedings{yetisgen-etal-2015-annotation,
    title = "Annotation of Clinically Important Follow-up Recommendations in Radiology Reports",
    author = "Yetisgen, Meliha  and
      Klassen, Prescott  and
      McCarthy, Lucas  and
      Pellicer, Elena  and
      Payne, Tom  and
      Gunn, Martin",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2606",
    doi = "10.18653/v1/W15-2606",
    pages = "50--54",
}
@inproceedings{dwi-prasetyo-etal-2015-impact,
    title = "On the Impact of Twitter-based Health Campaigns: A Cross-Country Analysis of Movember",
    author = "Dwi Prasetyo, Nugroho  and
      Hauff, Claudia  and
      Nguyen, Dong  and
      van den Broek, Tijs  and
      Hiemstra, Djoerd",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2607",
    doi = "10.18653/v1/W15-2607",
    pages = "55--63",
}
@inproceedings{segura-bedmar-etal-2015-exploring,
    title = "Exploring Word Embedding for Drug Name Recognition",
    author = "Segura-Bedmar, Isabel  and
      Su{\'a}rez-Paniagua, V{\'\i}ctor  and
      Mart{\'\i}nez, Paloma",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2608",
    doi = "10.18653/v1/W15-2608",
    pages = "64--72",
}
@inproceedings{weegar-dalianis-2015-creating,
    title = "Creating a rule based system for text mining of {N}orwegian breast cancer pathology reports",
    author = "Weegar, Rebecka  and
      Dalianis, Hercules",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2609",
    doi = "10.18653/v1/W15-2609",
    pages = "73--78",
}
@inproceedings{mitchell-steedman-2015-parser,
    title = "Parser Adaptation to the Biomedical Domain without Re-Training",
    author = "Mitchell, Jeff  and
      Steedman, Mark",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2610",
    doi = "10.18653/v1/W15-2610",
    pages = "79--89",
}
@inproceedings{alfalahi-etal-2015-expanding,
    title = "Expanding a dictionary of marker words for uncertainty and negation using distributional semantics",
    author = "Alfalahi, Alyaa  and
      Skeppstedt, Maria  and
      Ahlbom, Rickard  and
      Baskalayci, Roza  and
      Henriksson, Aron  and
      Asker, Lars  and
      Paradis, Carita  and
      Kerren, Andreas",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2611",
    doi = "10.18653/v1/W15-2611",
    pages = "90--96",
}
@inproceedings{roller-stevenson-2015-held,
    title = "Held-out versus Gold Standard: Comparison of Evaluation Strategies for Distantly Supervised Relation Extraction from {M}edline abstracts",
    author = "Roller, Roland  and
      Stevenson, Mark",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2612",
    doi = "10.18653/v1/W15-2612",
    pages = "97--102",
}
@inproceedings{busse-2015-checking,
    title = "Checking a structured pathology report for completeness of content using terminological knowledge",
    author = "Busse, Sebastian",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2613",
    doi = "10.18653/v1/W15-2613",
    pages = "103--108",
}
@inproceedings{cocos-etal-2015-effectively,
    title = "Effectively Crowdsourcing Radiology Report Annotations",
    author = "Cocos, Anne  and
      Masino, Aaron  and
      Qian, Ting  and
      Pavlick, Ellie  and
      Callison-Burch, Chris",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2614",
    doi = "10.18653/v1/W15-2614",
    pages = "109--114",
}
@inproceedings{zheng-yu-2015-identifying,
    title = "Identifying Key Concepts from {EHR} Notes Using Domain Adaptation",
    author = "Zheng, Jiaping  and
      Yu, Hong",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2615",
    doi = "10.18653/v1/W15-2615",
    pages = "115--119",
}
@inproceedings{moens-2015-information,
    title = "Information Extraction from Biomedical Texts: Learning Models with Limited Supervision",
    author = "Moens, Marie-Francine",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2616",
    doi = "10.18653/v1/W15-2616",
    pages = "120",
}
@inproceedings{friedrich-dalianis-2015-adverse,
    title = "Adverse Drug Event classification of health records using dictionary based pre-processing and machine learning",
    author = "Friedrich, Stefanie  and
      Dalianis, Hercules",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2617",
    doi = "10.18653/v1/W15-2617",
    pages = "121--130",
}
@inproceedings{venturi-etal-2015-nlp,
    title = "{NLP}{--}Based Readability Assessment of Health{--}Related Texts: a Case Study on {I}talian Informed Consent Forms",
    author = "Venturi, Giulia  and
      Bellandi, Tommaso  and
      Dell{'}Orletta, Felice  and
      Montemagni, Simonetta",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2618",
    doi = "10.18653/v1/W15-2618",
    pages = "131--141",
}
@inproceedings{jagannatha-etal-2015-mining,
    title = "Mining and Ranking Biomedical Synonym Candidates from {W}ikipedia",
    author = "Jagannatha, Abhyuday  and
      Chen, Jinying  and
      Yu, Hong",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2619",
    doi = "10.18653/v1/W15-2619",
    pages = "142--151",
}
@inproceedings{henriksson-2015-representing,
    title = "Representing Clinical Notes for Adverse Drug Event Detection",
    author = "Henriksson, Aron",
    booktitle = "Proceedings of the Sixth International Workshop on Health Text Mining and Information Analysis",
    month = sep,
    year = "2015",
    address = "Lisbon, Portugal",
    publisher = "Association for Computational Linguistics",
    url = "https://www.aclweb.org/anthology/W15-2620",
    doi = "10.18653/v1/W15-2620",
    pages = "152--158",
}

repository: emorynlp/nlprankings

repo_name: emorynlp/nlprankings

gha_language: TeX


text:
SUMMARY = "chronos initram install script"

require recipes-core/initrdscripts/include/chronos.inc

SRC_URI += " \
  file://init.sh \
  "

RDEPENDS_${PN} += " \
  e2fsprogs \
  "

do_install() {
  install -m 0755 ${WORKDIR}/init.sh ${D}/init
}

FILES_${PN} += " \
  /init \
  "

repository: esno/meta-chronos

repo_name: esno/meta-chronos


text:
DESCRIPTION = "Kernel module for the LLRF RTM carrier AMC"
LICENSE = "BSD"
LIC_FILES_CHKSUM = "file://LICENSE;md5=441c1ecbc199a036abf37f3aa47c5f34"

SRC_URI = "git://git@gitlab.esss.lu.se/icshwi/ics-xdriver-core.git;branch=master;protocol=ssh \
           file://0001-Modify-Makefile-for-Yocto.patch \
           file://0001-Add-Xilinx-BSD-LICENSE.patch \
           file://xdma.conf \
"

#Change these when updating
PV = "2017.1.48"
SRCREV = "123088a9bd1d989f0b1239f6f8e411392bafab3d"

S = "${WORKDIR}/git"

# Build number - increment on change
PR = "r0"

inherit module

RPROVIDES_${PN} += "kernel-module-ics-xdriver"
PACKAGES = "${PN} ${PN}-dbg ${PN}-dev"
PROVIDES = "${PN} ${PN}-dbg ${PN}-dev"

do_install_append () {
    # Create install directories
    install -d ${D}${sysconfdir}/modules-load.d
    install -d ${D}/etc/udev/rules.d

    # Install driver auto load conf file
    install -m 0644 ${WORKDIR}/xdma.conf ${D}${sysconfdir}/modules-load.d/xdma.conf

    # Install udev rules
    install -m 0666 ${S}/60-xdma.rules ${D}/etc/udev/rules.d/60-xdma.rules
}

FILES_${PN} += "/etc/udev/rules.d"

repository: jeonghanlee/yocto-ess

repo_name: jeonghanlee/yocto-ess


text:
package arcade

import (
	"fmt"

	"github.com/chr-ras/advent-of-code-2019/13-care-package/intcode"
	q "github.com/enriquebris/goconcurrentqueue"
	"github.com/gosuri/uilive"
)

// RunGame runs a game of bricks.
func RunGame(program []int64, gameFinished chan struct{}) {
	inputQueue := q.NewFIFO()
	outputQueue := q.NewFIFO()
	finalMemory := make(chan []int64)
	gameLoopFinished := make(chan struct{})

	go intcode.ExecuteProgram(program, finalMemory, inputQueue, outputQueue, 1024)
	go gameLoop(inputQueue, outputQueue, gameLoopFinished)

	<-finalMemory

	outputQueue.Enqueue(int64(99))

	<-gameLoopFinished

	gameFinished <- struct{}{}
}

func gameLoop(inputQueue q.Queue, outputQueue q.Queue, gameLoopFinished chan struct{}) {
	writer := uilive.New()
	writer.Start()

	gameState := prepareGameState()
	score := int64(0)
	paddlePos := int64(-1)
	ballPos := int64(-1)

	initialRenderComplete := false
	initialAction := false
	renderRounds := 0
	paddleMovement := int64(0)

	for {
		xElement, _ := outputQueue.DequeueOrWaitForNextElement()
		x := xElement.(int64)
		if x == 99 {
			gameLoopFinished <- struct{}{}
			return
		}

		yElement, _ := outputQueue.DequeueOrWaitForNextElement()
		typeElement, _ := outputQueue.DequeueOrWaitForNextElement()
		y := yElement.(int64)
		output := typeElement.(int64)
		ballMoved := false

		if x == -1 && y == 0 {
			score = output
		} else {
			newCellState := cellState(output)
			gameState[y][x] = newCellState

			if newCellState == paddle {
				paddlePos = x
			}

			if newCellState == ball {
				ballPos = x
				ballMoved = true
			}

			renderRounds++
			if renderRounds == 1170 {
				initialRenderComplete = true
				initialAction = true
			}

			paddleMovement = int64(0)
			if initialRenderComplete && (ballMoved || initialAction) {

				if initialAction {
					initialAction = false
				}

				if ballPos > paddlePos {
					paddleMovement = 1
				} else if ballPos < paddlePos {
					paddleMovement = -1
				}

				inputQueue.Enqueue(paddleMovement)

			}
		}

		render(gameState, score, writer)
	}
}

func prepareGameState() [][]cellState {
	gameState := make([][]cellState, 26)
	for i := range gameState {
		gameState[i] = make([]cellState, 45)
	}

	return gameState
}

func render(gameState [][]cellState, score int64, writer *uilive.Writer) {
	output := fmt.Sprintf("Score: %    d\n", score)
	for _, row := range gameState {
		for _, cell := range row {
			cellOutput := ""
			switch cell {
			case empty:
				cellOutput = " "
			case wall:
				cellOutput = "░"
			case block:
				cellOutput = "#"
			case paddle:
				cellOutput = "="
			case ball:
				cellOutput = "O"
			default:
				panic(fmt.Errorf("Unexpected cell type %v", cell))
			}

			output += cellOutput
		}

		output += "\n"
	}

	fmt.Fprintf(writer, output)
}

type cellState int64

const (
	empty cellState = iota
	wall
	block
	paddle
	ball
)

license: Unlicense


text:
@article{ohagan_monte_2007,
	title = {Monte {Carlo} probabilistic sensitivity analysis for patient level simulation models: efficient estimation of mean and variance using {ANOVA}},
	volume = {16},
	issn = {1057-9230},
	shorttitle = {Monte {Carlo} probabilistic sensitivity analysis for patient level simulation models},
	doi = {10.1002/hec.1199},
	abstract = {Probabilistic sensitivity analysis (PSA) is required to account for uncertainty in cost-effectiveness calculations arising from health economic models. The simplest way to perform PSA in practice is by Monte Carlo methods, which involves running the model many times using randomly sampled values of the model inputs. However, this can be impractical when the economic model takes appreciable amounts of time to run. This situation arises, in particular, for patient-level simulation models (also known as micro-simulation or individual-level simulation models), where a single run of the model simulates the health care of many thousands of individual patients. The large number of patients required in each run to achieve accurate estimation of cost-effectiveness means that only a relatively small number of runs is possible. For this reason, it is often said that PSA is not practical for patient-level models. We develop a way to reduce the computational burden of Monte Carlo PSA for patient-level models, based on the algebra of analysis of variance. Methods are presented to estimate the mean and variance of the model output, with formulae for determining optimal sample sizes. The methods are simple to apply and will typically reduce the computational demand very substantially.},
	language = {eng},
	number = {10},
	journal = {Health Economics},
	author = {O'Hagan, Anthony and Stevenson, Matt and Madan, Jason},
	month = oct,
	year = {2007},
	pmid = {17173339},
	keywords = {Analysis of Variance, Computer Simulation, Cost-Benefit Analysis, Humans, Models, Economic, Models, Statistical, Monte Carlo Method},
	pages = {1009--1023}
}

repository: spgarbet/right

repo_name: spgarbet/right


text:
# Generated by superflore -- DO NOT EDIT
#
# Copyright Open Source Robotics Foundation

inherit ros_distro_melodic
inherit ros_superflore_generated

DESCRIPTION = "map_server provides the <tt>map_server</tt> ROS Node, which offers map data as a ROS Service. It also provides the <tt>map_saver</tt> command-line utility, which allows dynamically generated maps to be saved to file."
AUTHOR = "David V. Lu!! <davidvlu@gmail.com>"
ROS_AUTHOR = "Brian Gerkey, Tony Pratkanis"
HOMEPAGE = "http://wiki.ros.org/map_server"
SECTION = "devel"
LICENSE = "BSD"
LIC_FILES_CHKSUM = "file://package.xml;beginline=17;endline=17;md5=01c2bc31767ccb3a68e12f02612b2a97"

ROS_CN = "navigation"
ROS_BPN = "map_server"

ROS_BUILD_DEPENDS = " \
    bullet \
    libsdl \
    libsdl-image \
    nav-msgs \
    roscpp \
    tf2 \
    yaml-cpp \
"

ROS_BUILDTOOL_DEPENDS = " \
    catkin-native \
"

ROS_EXPORT_DEPENDS = " \
    bullet \
    libsdl \
    libsdl-image \
    nav-msgs \
    roscpp \
    tf2 \
    yaml-cpp \
"

ROS_BUILDTOOL_EXPORT_DEPENDS = ""

ROS_EXEC_DEPENDS = " \
    bullet \
    libsdl \
    libsdl-image \
    nav-msgs \
    roscpp \
    tf2 \
    yaml-cpp \
"

# Currently informational only -- see http://www.ros.org/reps/rep-0149.html#dependency-tags.
ROS_TEST_DEPENDS = " \
    rospy \
    rostest \
    rosunit \
"

DEPENDS = "${ROS_BUILD_DEPENDS} ${ROS_BUILDTOOL_DEPENDS}"
# Bitbake doesn't support the "export" concept, so build them as if we needed them to build this package (even though we actually
# don't) so that they're guaranteed to have been staged should this package appear in another's DEPENDS.
DEPENDS += "${ROS_EXPORT_DEPENDS} ${ROS_BUILDTOOL_EXPORT_DEPENDS}"

RDEPENDS_${PN} += "${ROS_EXEC_DEPENDS}"

# matches with: https://github.com/ros-gbp/navigation-release/archive/release/melodic/map_server/1.16.6-1.tar.gz
ROS_BRANCH ?= "branch=release/melodic/map_server"
SRC_URI = "git://github.com/ros-gbp/navigation-release;${ROS_BRANCH};protocol=https"
SRCREV = "02aec622cfa950d97d625de9977a8737dc52e303"
S = "${WORKDIR}/git"

ROS_BUILD_TYPE = "catkin"

inherit ros_${ROS_BUILD_TYPE}

repository: jianchangfeng/meta-ros

repo_name: jianchangfeng/meta-ros


text:
@INPROCEEDINGS{8953134-B,

 author={R. {Valencia} and C. {Sham} and O. {Sinnen}},
 booktitle={2019 International Conference on Field-Programmable Technology (FPT)},
 title={Evolved binary neural networks through harnessing FPGA capabilities},
 year={2019},
 volume={},
 number={},
 pages={395-398},
 abstract={},
 keywords={Neuroevolution;binary neural networks;BiSUNA;discrete optimization},
 ISSN={null},
 month={Dec}}
@INPROCEEDINGS{8977877,

 author={R. {Valencia} and C. W. {Sham} and O. {Sinnen}},
 booktitle={2019 International Conference on Field-Programmable Technology (ICFPT)},
 title={Evolved Binary Neural Networks Through Harnessing FPGA Capabilities},
 year={2019},
 volume={},
 number={},
 pages={395-398},
 abstract={The exponential progress of semiconductor tech-nologies has enabled the proliferation of deep learning as a prominent area of research, where neural networks have demon-strated its effectiveness to solve very hard multi dimensional problems. This paper focuses on one in particular, Binary Neural Networks (BNN), which use fixed length bits in its connections and logic functions to perform excitation operations. Exploiting those characteristics, hardware accelerators that integrate field-programmable gate arrays (FPGAs) have been adopted to hasten inference of deep learning networks, given its proficiency to maximize parallelism and energy efficiency. This work will show how the algorithm Binary Spectrum-diverse Unified Neuroevolution Architecture (BiSUNA) can perform training and inference on FPGA without the need of gradient descent. Source code can be found in github.com/rval735/bisunaocl},
 keywords={FPGA;BiSUNA;Binary Neural Network;TWEANN;Evolutionary Algorithm},
 doi={10.1109/ICFPT47387.2019.00076},
 ISSN={null},
 month={Dec},}


text:
SUMMARY = "Python @deprecated decorator to deprecate old python classes, functions or methods."
HOMEPAGE = "https://deprecated.readthedocs.io/en/latest/"
LICENSE = "MIT"
LIC_FILES_CHKSUM = "file://LICENSE.rst;md5=44288e26f4896bdab14072d4fa35ff01"

PYPI_PACKAGE = "Deprecated"
SRC_URI[sha256sum] = "e5323eb936458dccc2582dc6f9c322c852a775a27065ff2b0c4970b9d53d01b3"

inherit pypi setuptools3

RDEPENDS:${PN} += " \
	${PYTHON_PN}-wrapt \
"

repository: openembedded/meta-openembedded

repo_name: openembedded/meta-openembedded


text:
# This Isar layer is part of MTDA
# Copyright (C) 2017-2019 Mentor Graphics, a Siemens business

inherit dpkg

SRC_URI += "git://github.com/MentorEmbedded/zerorpc-python.git;protocol=https;branch=debian/0.6.3"
SRCREV   = "145d70032e9cc9c78ad3b1c545204333a65d578b"
S        = "${WORKDIR}/git"

do_prepare_build_append() {
    echo "DEB_BUILD_OPTIONS += nocheck" >>${S}/debian/rules
}

repository: LevyForchh/mtda

repo_name: LevyForchh/mtda


text:
SUMMARY = "OpenSwitch system initilization script."
LICENSE = "Apache-2.0"
LIC_FILES_CHKSUM = "file://${COMMON_LICENSE_DIR}/Apache-2.0;md5=89aea4e17d99a7cacdbeed46a0096b10"

RDEPENDS_${PN} = "bash"

SRC_URI = "file://ops-init.service \
           file://ops-first-boot.service \
           file://ops-init.sh \
           file://ops-profile.sh \
           file://ops-vrf-sysctl-set.conf \
           file://ops-vrf-sysctl-unset.conf \
           file://ops-arp-sysctl-set.conf\
           file://ops-ping-sysctl-set.conf\
           file://ops-overcommit-set.conf\
"

S = "${WORKDIR}"

do_install () {
    install -d ${D}${sbindir}
    install -d ${D}${systemd_unitdir}/system
    install -d ${D}${sysconfdir}/profile.d
    install -d ${D}${sysconfdir}/ops/sysctl.d
    install -d ${D}${sysconfdir}/sysctl.d

    install -m 0644 ${WORKDIR}/ops-first-boot.service ${D}${systemd_unitdir}/system
    install -m 0644 ${WORKDIR}/ops-init.service ${D}${systemd_unitdir}/system
    install -m 0755 ${WORKDIR}/ops-init.sh ${D}${sbindir}/ops-init
    install -m 0755 ${WORKDIR}/ops-profile.sh ${D}${sysconfdir}/profile.d/ops-profile
    install -m 0755 ${WORKDIR}/ops-vrf-sysctl-set.conf ${D}${sysconfdir}/ops/sysctl.d/ops-vrf-sysctl-set.conf
    install -m 0755 ${WORKDIR}/ops-vrf-sysctl-unset.conf ${D}${sysconfdir}/ops/sysctl.d/ops-vrf-sysctl-unset.conf
    install -m 0644 ${WORKDIR}/ops-arp-sysctl-set.conf ${D}${sysconfdir}/sysctl.d/
    install -m 0755 ${WORKDIR}/ops-ping-sysctl-set.conf ${D}${sysconfdir}/sysctl.d/
    install -m 0755 ${WORKDIR}/ops-overcommit-set.conf ${D}${sysconfdir}/sysctl.d/
}

FILES_${PN} += "${sysconfdir}/ops/sysctl.d"
SYSTEMD_PACKAGES = "${PN}"
SYSTEMD_SERVICE_${PN} = "ops-init.service ops-first-boot.service"

inherit systemd

repository: billyjbryant/ops-build

repo_name: billyjbryant/ops-build


text:
/* global Parse */

export function issuesCountsInfo(ownerRepoStr) {
  return Parse.Cloud.run(`issuesCountsInfo`, {
    ownerRepoStr,
  });
}

export function pullRequestsCountsInfo(ownerRepoStr) {
  return Parse.Cloud.run(`PRsCountsInfo`, {
    ownerRepoStr,
  });
}

export function getTopPaths() {
  return Parse.Cloud.run(`topPaths`, {
  });
}

repository: tomchentw/xrossref

repo_name: tomchentw/xrossref

gha_language: JavaScript


text:
@article{ison2015tools,
  title={Tools and data services registry: a community effort to document bioinformatics resources},
  author={Ison, Jon and Rapacki, Kristoffer and M{\'e}nager, Herv{\'e} and Kala{\v{s}}, Mat{\'u}{\v{s}} and Rydza, Emil and Chmura, Piotr and Anthon, Christian and Beard, Niall and Berka, Karel and Bolser, Dan and others},
  journal={Nucleic acids research},
  volume={44},
  number={D1},
  pages={D38--D47},
  year={2015},
  publisher={Oxford University Press}
}

@article{whetzel2011bioportal,
  title={BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications},
  author={Whetzel, Patricia L and Noy, Natalya F and Shah, Nigam H and Alexander, Paul R and Nyulas, Csongor and Tudorache, Tania and Musen, Mark A},
  journal={Nucleic acids research},
  volume={39},
  number={suppl\_2},
  pages={W541--W545},
  year={2011},
  publisher={Oxford University Press}
}
@inproceedings{jupp2015new,
  title={A new Ontology Lookup Service at EMBL-EBI.},
  author={Jupp, Simon and Burdett, Tony and Leroy, Catherine and Parkinson, Helen E},
  booktitle={SWAT4LS},
  pages={118--119},
  year={2015}
}
@article{ison2013edam,
  title={EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats},
  author={Ison, Jon and Kala{\v{s}}, Mat{\'u}{\v{s}} and Jonassen, Inge and Bolser, Dan and Uludag, Mahmut and McWilliam, Hamish and Malone, James and Lopez, Rodrigo and Pettifer, Steve and Rice, Peter},
  journal={Bioinformatics},
  volume={29},
  number={10},
  pages={1325--1332},
  year={2013},
  publisher={Oxford University Press}
}
@misc{
  d3js,
  author = {Mike Bostock},
  year = 2018,
  title = {{D3 is a JavaScript library for visualizing data with HTML, SVG, and CSS.}},
  howpublished = {https://d3js.org/}
}

repository: hmenager/edam-browser

repo_name: hmenager/edam-browser


text:
@BOOK{BRLS94,
  title        = {Нарысы па гiсторыi беларуска-рускiх
                  лiтаратурных сувязей: У 4 кн.},
  organization = {Акад.\ навук Беларусi. Iн-т лiт.},
  address      = {Мiнск},
  publisher    = {Навука i тэхнiка},
  year         = {1994},
  volume       = {2: Пачатак ХХ ст. 1900--1917 гг.},
  editor       = {В. А. Каваленка and I. Я. Навуменка},
  pagetotal    = {440},
  language     = {russian},
}


text:
inherit esw_examples features_check

REQUIRED_MACHINE_FEATURES = "mutex"

ESW_COMPONENT_SRC = "/XilinxProcessorIPLib/drivers/mutex/examples/"

repository: Xilinx/meta-xilinx

repo_name: Xilinx/meta-xilinx

gha_language: C