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staging/test/README.md
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# test
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Shared through spaCR's Model Zoo. Uploaded by a spaCR user, not validated by
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the spaCR maintainers -- read the table and the limitations before using it.
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- **Kind:** cellpose
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- **Checkpoint:** `test/hela_60x_v2.CP_model`
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- **SHA-256:** `bea0a3d49ae1b4cb74c05cdf5eca773b00a550afd5ad2e77dae01d571e1aecc8`
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## Performance
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| model | train | train obj. | test | test obj. | CV | F1 @ IoU 0.5 | AJI | Dice | final train loss | final val loss | val - train | best epoch |
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|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| stock (no fine-tuning) | — | — | ND | ND | — | ND | ND | ND | — | — | — | — |
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| **this model** | ND | ND | ND | ND | ND | **ND** | ND | ND | ND | ND | — | ND |
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## Trained on
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ND
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## Limitations
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ND
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## Use it in spaCR
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```bash
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pip install spacr
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```
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Open the Model Zoo, find this model, press Download. Or:
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```python
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from spacr import model_zoo
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entry = next(e for e in model_zoo.catalogue() if e.name == "hela_60x_v2.CP_model")
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path = model_zoo.install(entry, dest="~/spacr_models")
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```
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- spaCR on GitHub: https://github.com/EinarOlafsson/spacr
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- Model Zoo API: `spacr.model_zoo`
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- Mask generation: `spacr.core.preprocess_generate_masks`
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