opticaldna-hg38-2048 / deepencoder.py
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import torch.nn as nn
import torch
import torch.nn.functional as F
import copy
from contextlib import nullcontext
import math
from typing import Optional, Tuple
from einops import rearrange
from easydict import EasyDict as adict
from typing import Optional, Tuple, Type
from functools import partial
class MlpProjector(nn.Module):
def __init__(self, cfg):
super().__init__()
self.cfg = cfg
if cfg.projector_type == "identity":
modules = nn.Identity()
elif cfg.projector_type == "linear":
modules = nn.Linear(cfg.input_dim, cfg.n_embed)
elif cfg.projector_type == "mlp_gelu":
mlp_depth = cfg.get("depth", 1)
modules = [nn.Linear(cfg.input_dim, cfg.n_embed)]
for _ in range(1, mlp_depth):
modules.append(nn.GELU())
modules.append(nn.Linear(cfg.n_embed, cfg.n_embed))
modules = nn.Sequential(*modules)
elif cfg.projector_type == "normlayer_downsample_mlp_gelu":
mlp_depth = cfg.get("depth", 1)
mlp_ratio = cfg.get("mlp_ratio", 1)
modules = [
nn.LayerNorm(cfg.input_dim * cfg.downsample_ratio * cfg.downsample_ratio),
nn.Linear(cfg.input_dim * cfg.downsample_ratio * cfg.downsample_ratio, cfg.n_embed * mlp_ratio)
]
for _ in range(1, mlp_depth - 1):
modules.append(nn.GELU())
modules.append(nn.Linear(cfg.n_embed * mlp_ratio, cfg.n_embed * mlp_ratio))
modules.append(nn.GELU())
modules.append(nn.Linear(cfg.n_embed * mlp_ratio, cfg.n_embed))
modules = nn.Sequential(*modules)
elif cfg.projector_type == "downsample_mlp_gelu":
mlp_depth = cfg.get("depth", 1)
mlp_ratio = cfg.get("mlp_ratio", 1)
modules = [nn.Linear(cfg.input_dim * cfg.downsample_ratio * cfg.downsample_ratio, cfg.n_embed * mlp_ratio)]
for _ in range(1, mlp_depth - 1):
modules.append(nn.GELU())
modules.append(nn.Linear(cfg.n_embed * mlp_ratio, cfg.n_embed * mlp_ratio))
modules.append(nn.GELU())
modules.append(nn.Linear(cfg.n_embed * mlp_ratio, cfg.n_embed))
modules = nn.Sequential(*modules)
elif cfg.projector_type == "low_high_hybrid_split_mlp_gelu":
mlp_depth = cfg.get("depth", 1)
self.high_up_proj = nn.Linear(cfg.input_dim, cfg.n_embed // 2)
self.low_up_proj = nn.Linear(cfg.input_dim, cfg.n_embed // 2)
modules = []
for _ in range(1, mlp_depth):
modules.append(nn.GELU())
modules.append(nn.Linear(cfg.n_embed, cfg.n_embed))
modules = nn.Sequential(*modules)
elif cfg.projector_type == "hybrid_split_feature_mlp_gelu":
mlp_depth = cfg.get("depth", 1)
channel_div = cfg.get("channel_div", 0.5)
self.high_up_proj = nn.Linear(cfg.input_dim[0], int(cfg.n_embed * channel_div))
self.low_up_proj = nn.Linear(cfg.input_dim[1], cfg.n_embed - int(cfg.n_embed * channel_div))
modules = []
for _ in range(1, mlp_depth):
modules.append(nn.GELU())
modules.append(nn.Linear(cfg.n_embed, cfg.n_embed))
modules = nn.Sequential(*modules)
elif cfg.projector_type == "low_high_split_mlp_gelu":
mlp_depth = cfg.get("depth", 1)
modules = []
for _ in range(1, mlp_depth):
modules.append(nn.GELU())
modules.append(nn.Linear(cfg.n_embed // 2, cfg.n_embed // 2))
modules = nn.Sequential(*modules)
self.high_layers = nn.Sequential(*modules)
self.low_layers = copy.deepcopy(modules)
else:
raise ValueError(f"Unknown projector type: {cfg.projector_type}")
if cfg.get("token_pooling", False):
self.token_pooling_layer = nn.Linear(cfg.input_dim * 4, cfg.input_dim)
if cfg.get("conv_fusion_high_low_features", False):
self.fusion_layer = nn.Linear(cfg.input_dim, cfg.input_dim)
self.layers = modules
def forward(self, x):
if self.cfg.get("token_pooling", False):
batch_size, wxh, channels = x.shape
w = h = int(wxh**0.5)
x = x.view(batch_size, w, h, channels)
x = x.permute(0, 3, 1, 2)
patches = x.unfold(2, 2, 2).unfold(3, 2, 2)
batch_size, channels, h_patches, w_patches, _, _ = patches.size()
patches = patches.contiguous().view(batch_size, channels, h_patches * w_patches, -1)
patches = patches.permute(0, 2, 1, 3).contiguous()
patches = patches.view(batch_size, h_patches * w_patches, channels * 4)
x = self.token_pooling_layer(patches)
if self.cfg.get("conv_fusion_high_low_features", False):
x = self.fusion_layer(x[:, 0]) + x[:, 1]
if self.cfg.projector_type == 'low_high_hybrid_split_mlp_gelu':
high_x, low_x = x[0], x[1]
high_x = self.high_up_proj(high_x)
low_x = self.low_up_proj(low_x)
x = torch.concat([high_x, low_x], dim=-1)
if self.cfg.projector_type == 'hybrid_split_feature_mlp_gelu':
high_x = x[...,:self.cfg.input_dim[0]]
low_x = x[...,self.cfg.input_dim[0]:]
high_x = self.high_up_proj(high_x)
low_x = self.low_up_proj(low_x)
x = torch.concat([high_x, low_x], dim=-1)
if self.cfg.projector_type == 'low_high_split_mlp_gelu':
high_x, low_x = x[0], x[1]
high_x = self.high_layers(high_x)
low_x = self.low_layers(low_x)
x = torch.concat([high_x, low_x], dim=-1)
return x
if self.cfg.projector_type == 'downsample_mlp_gelu' or self.cfg.projector_type == 'normlayer_downsample_mlp_gelu':
bs, hw, input_dim = x.shape
h = w = int((hw) ** 0.5)
"""compute padding"""
if h % self.cfg.downsample_ratio:
pad = self.cfg.downsample_ratio - h % self.cfg.downsample_ratio
else:
pad = 0
x = x.reshape(bs, h, w, input_dim)
if pad > 0:
x = F.pad(x, (0, 0, 0, pad, 0, pad), "constant", 0)
"""4 to 1 concat"""
x = x.permute(0, 3, 1, 2)
x = F.unfold(x, kernel_size=self.cfg.downsample_ratio, stride=self.cfg.downsample_ratio, padding=0)
x = x.permute(0, 2, 1)
return self.layers(x)
@staticmethod
def get_flops_per_sample(cfg):
if cfg.projector_type == "linear":
fwd = 2 * cfg.input_dim * cfg.n_embed
elif "mlp_gelu" in cfg.projector_type :
mlp_depth = cfg.get("depth", 1)
downsample_ratio = cfg.get("downsample_ratio", 1)
input_dim = sum(cfg.input_dim) if isinstance(cfg.input_dim, list) else cfg.input_dim
input_dim = input_dim * downsample_ratio * downsample_ratio
fwd = 2 * input_dim * cfg.n_embed + (mlp_depth - 1) * 2 * cfg.n_embed * cfg.n_embed
else:
fwd = 0
return fwd * 3
class LayerNormfp32(torch.nn.LayerNorm):
def forward(self, x: torch.Tensor):
orig_type = x.dtype
ret = super().forward(x.type(torch.float32))
return ret.type(orig_type)
def get_abs_pos(abs_pos, tgt_size):
dim = abs_pos.size(-1)
abs_pos_new = abs_pos.squeeze(0)
cls_token, old_pos_embed = abs_pos_new[:1], abs_pos_new[1:]
src_size = int(math.sqrt(abs_pos_new.shape[0] - 1))
tgt_size = int(math.sqrt(tgt_size))
dtype = abs_pos.dtype
if src_size != tgt_size:
old_pos_embed = old_pos_embed.view(1, src_size, src_size, dim).permute(0, 3, 1,
2).contiguous()
old_pos_embed = old_pos_embed.to(torch.float32)
new_pos_embed = F.interpolate(
old_pos_embed,
size=(tgt_size, tgt_size),
mode='bicubic',
antialias=True,
align_corners=False,
).to(dtype)
new_pos_embed = new_pos_embed.permute(0, 2, 3, 1)
new_pos_embed = new_pos_embed.view(tgt_size * tgt_size, dim)
vision_pos_embed = torch.cat([cls_token, new_pos_embed], dim=0)
vision_pos_embed = vision_pos_embed.view(1, tgt_size * tgt_size + 1, dim)
return vision_pos_embed
else:
return abs_pos
@torch.jit.script
def quick_gelu(x):
return x * torch.sigmoid(1.702 * x)
class CLIPVisionEmbeddings(nn.Module):
def __init__(self, hidden_size=1024, image_size=224, patch_size=14, num_channels=3):
super().__init__()
self.embed_dim = hidden_size
self.image_size = image_size
self.patch_size = patch_size
self.class_embedding = torch.nn.Parameter(torch.randn(self.embed_dim))
self.patch_embedding = torch.nn.Conv2d(
in_channels=num_channels,
out_channels=self.embed_dim,
kernel_size=self.patch_size,
stride=self.patch_size,
bias=False,
)
self.num_patches = (self.image_size // self.patch_size) ** 2
self.num_positions = self.num_patches + 1
self.position_embedding = torch.nn.Embedding(self.num_positions, self.embed_dim)
self.register_buffer(
"position_ids", torch.arange(self.num_positions).expand((1, -1))
)
def forward(self, pixel_values, patch_embeds):
batch_size = pixel_values.shape[0]
if patch_embeds is not None:
patch_embeds = patch_embeds
else:
patch_embeds = self.patch_embedding(pixel_values)
patch_embeds = patch_embeds.flatten(2).transpose(1, 2)
class_embeds = self.class_embedding.expand(batch_size, 1, -1)
embeddings = torch.cat([class_embeds, patch_embeds], dim=1)
embeddings = embeddings + get_abs_pos(self.position_embedding(self.position_ids), embeddings.size(1))
return embeddings
class NoTPFeedForward(nn.Module):
def __init__(
self,
cfg,
dim: int,
hidden_dim: int,
):
super().__init__()
self.fc1 = torch.nn.Linear(dim, hidden_dim, bias=True)
self.fc2 = torch.nn.Linear(hidden_dim, dim, bias=True)
def forward(self, x):
output = self.fc2(quick_gelu(self.fc1(x)))
return output
class NoTPAttention(torch.nn.Module):
def __init__(self, cfg):
super().__init__()
self.num_heads = cfg.num_attention_heads
self.n_local_heads = cfg.num_attention_heads
self.head_dim = cfg.hidden_size // cfg.num_attention_heads
self.max_seq_len = cfg.seq_length
self.use_flash_attention = cfg.use_flash_attn
self.qkv_proj = torch.nn.Linear(cfg.hidden_size, cfg.hidden_size * 3, bias=True)
self.out_proj = torch.nn.Linear(cfg.hidden_size, cfg.hidden_size, bias=True)
self.attn_drop = cfg.attention_dropout
def forward(
self,
x: torch.Tensor,
):
bsz, seqlen, _ = x.shape
xqkv = self.qkv_proj(x)
xqkv = xqkv.view(bsz, seqlen, 3, self.num_heads, self.head_dim)
if self.use_flash_attention:
xq, xk, xv = torch.split(xqkv, 1, dim=2)
xq = xq.squeeze(2)
xk = xk.squeeze(2)
xv = xv.squeeze(2)
xq = xq.permute(0, 2, 1, 3)
xk = xk.permute(0, 2, 1, 3)
xv = xv.permute(0, 2, 1, 3)
output = torch.nn.functional.scaled_dot_product_attention(xq, xk, xv, attn_mask=None)
output = output.permute(0, 2, 1, 3).reshape(bsz, seqlen, -1)
else:
xq, xk, xv = torch.split(xqkv, 1, dim=2)
xq = xq.squeeze(2)
xk = xk.squeeze(2)
xv = xv.squeeze(2)
xq = xq.permute(0, 2, 1, 3)
xk = xk.permute(0, 2, 1, 3)
xv = xv.permute(0, 2, 1, 3)
output = torch.nn.functional.scaled_dot_product_attention(xq, xk, xv, attn_mask=None)
output = output.permute(0, 2, 1, 3).reshape(bsz, seqlen, -1)
output = self.out_proj(output)
return output
class NoTPTransformerBlock(nn.Module):
def __init__(self, cfg, layer_id: int, multiple_of=256):
super().__init__()
self.n_heads = cfg.num_attention_heads
self.dim = cfg.hidden_size
self.head_dim = cfg.hidden_size // cfg.num_attention_heads
self.self_attn = NoTPAttention(cfg)
self.mlp = NoTPFeedForward(
cfg, dim=cfg.hidden_size, hidden_dim=cfg.ffn_hidden_size
)
self.layer_id = layer_id
self.layer_norm1 = torch.nn.LayerNorm(
cfg.hidden_size, eps=cfg.layernorm_epsilon
)
self.layer_norm2 = torch.nn.LayerNorm(
cfg.hidden_size, eps=cfg.layernorm_epsilon
)
def forward(self, x: torch.Tensor):
residual = self.self_attn.forward(self.layer_norm1(x))
h = x + residual
out = h + self.mlp.forward(self.layer_norm2(h))
return out
class NoTPTransformer(nn.Module):
def __init__(self, cfg):
super().__init__()
self.cfg = cfg
self.num_layers = cfg.num_layers
self.layers = torch.nn.ModuleList()
for layer_id in range(self.num_layers):
self.layers.append(
NoTPTransformerBlock(
cfg,
layer_id + 1,
)
)
def forward(
self,
hidden_states,
):
for lid, layer in enumerate(self.layers):
hidden_states = layer(hidden_states)
return hidden_states
class VitModel(nn.Module):
def __init__(
self,
cfg,
freeze_embed=False,
freeze_pre_norm=False
) -> None:
super().__init__()
self.embeddings = CLIPVisionEmbeddings(hidden_size=cfg.hidden_size, image_size=cfg.image_size, patch_size=cfg.patch_size)
if freeze_embed:
for name, param in self.embeddings.named_parameters():
param.requires_grad = False
self.transformer = NoTPTransformer(cfg=cfg)
if cfg.get("fp32norm", False):
logger.info("Load fp32 layernorm for ViT.")
self.pre_layrnorm = LayerNormfp32(
cfg.hidden_size,
eps=cfg.get("pre_layernorm_epsilon", 1e-5),
)
else:
self.pre_layrnorm = torch.nn.LayerNorm(
cfg.hidden_size,
eps=cfg.get("pre_layernorm_epsilon", 1e-5),
)
if freeze_pre_norm:
for name, param in self.pre_layrnorm.named_parameters():
param.requires_grad = False
for p in self.parameters():
p.micro_dp = True
def set_input_tensor(self, input_tensor):
if not isinstance(input_tensor, list):
input_tensor = [input_tensor]
self.transformer.set_input_tensor(input_tensor[0])
def __str__(self) -> str:
return "open_clip"
def forward(
self,
x,
patch_embeds
):
x = self.embeddings(x, patch_embeds)
hidden_states = self.pre_layrnorm(x)
output = self.transformer(hidden_states)
return output
vit_model_cfg = adict(
num_layers=24,
hidden_size=1024,
num_heads = 16,
num_attention_heads=16,
ffn_hidden_size=4096,
seq_length=256,
max_position_embeddings=256,
use_flash_attn=False,
understand_projector_stride=2,
hidden_dropout = 0.0,
attention_dropout = 0.0,
no_persist_layer_norm = False,
layernorm_epsilon = 1e-5,
pre_layernorm_epsilon = 1e-5,
image_size = 224,
patch_size = 14,
recompute_list = []
)
def build_clip_l():
return VitModel(
cfg=vit_model_cfg,
freeze_embed=False,
freeze_pre_norm=False,
)
def get_abs_pos_sam(abs_pos, tgt_size):
dtype = abs_pos.dtype
src_size = abs_pos.size(1)
if src_size != tgt_size:
old_pos_embed = abs_pos.permute(0, 3, 1, 2)
old_pos_embed = old_pos_embed.to(torch.float32)
new_pos_embed = F.interpolate(
old_pos_embed,
size=(tgt_size, tgt_size),
mode='bicubic',
antialias=True,
align_corners=False,
).to(dtype)
new_pos_embed = new_pos_embed.permute(0, 2, 3, 1)
return new_pos_embed
else:
return abs_pos
class MLPBlock(nn.Module):
def __init__(
self,
embedding_dim: int,
mlp_dim: int,
act: Type[nn.Module] = nn.GELU,
) -> None:
super().__init__()
self.lin1 = nn.Linear(embedding_dim, mlp_dim)
self.lin2 = nn.Linear(mlp_dim, embedding_dim)
self.act = act()
def forward(self, x: torch.Tensor) -> torch.Tensor:
return self.lin2(self.act(self.lin1(x)))
class LayerNorm2d(nn.Module):
def __init__(self, num_channels: int, eps: float = 1e-6) -> None:
super().__init__()
self.weight = nn.Parameter(torch.ones(num_channels))
self.bias = nn.Parameter(torch.zeros(num_channels))
self.eps = eps
def forward(self, x: torch.Tensor) -> torch.Tensor:
u = x.mean(1, keepdim=True)
s = (x - u).pow(2).mean(1, keepdim=True)
x = (x - u) / torch.sqrt(s + self.eps)
x = self.weight[:, None, None] * x + self.bias[:, None, None]
return x
class ImageEncoderViT(nn.Module):
def __init__(
self,
img_size: int = 1024,
patch_size: int = 16,
in_chans: int = 3,
embed_dim: int = 768,
depth: int = 12,
num_heads: int = 12,
mlp_ratio: float = 4.0,
out_chans: int = 256,
qkv_bias: bool = True,
norm_layer: Type[nn.Module] = nn.LayerNorm,
act_layer: Type[nn.Module] = nn.GELU,
use_abs_pos: bool = True,
use_rel_pos: bool = False,
rel_pos_zero_init: bool = True,
window_size: int = 0,
global_attn_indexes: Tuple[int, ...] = (),
) -> None:
super().__init__()
self.img_size = img_size
self.patch_embed = PatchEmbed(
kernel_size=(patch_size, patch_size),
stride=(patch_size, patch_size),
in_chans=in_chans,
embed_dim=embed_dim,
)
self.pos_embed: Optional[nn.Parameter] = None
if use_abs_pos:
self.pos_embed = nn.Parameter(
torch.zeros(1, img_size // patch_size, img_size // patch_size, embed_dim)
)
self.blocks = nn.ModuleList()
for i in range(depth):
block = Block(
dim=embed_dim,
num_heads=num_heads,
mlp_ratio=mlp_ratio,
qkv_bias=qkv_bias,
norm_layer=norm_layer,
act_layer=act_layer,
use_rel_pos=use_rel_pos,
rel_pos_zero_init=rel_pos_zero_init,
window_size=window_size if i not in global_attn_indexes else 0,
input_size=(img_size // patch_size, img_size // patch_size),
)
self.blocks.append(block)
self.neck = nn.Sequential(
nn.Conv2d(
embed_dim,
out_chans,
kernel_size=1,
bias=False,
),
LayerNorm2d(out_chans),
nn.Conv2d(
out_chans,
out_chans,
kernel_size=3,
padding=1,
bias=False,
),
LayerNorm2d(out_chans),
)
self.net_2 = nn.Conv2d(256, 512, kernel_size=3, stride=2, padding=1, bias=False)
self.net_3 = nn.Conv2d(512, 1024, kernel_size=3, stride=2, padding=1, bias=False)
def forward(self, x: torch.Tensor) -> torch.Tensor:
x = self.patch_embed(x)
if self.pos_embed is not None:
x = x + get_abs_pos_sam(self.pos_embed, x.size(1))
for blk in self.blocks:
x = blk(x)
x = self.neck(x.permute(0, 3, 1, 2))
x2 = self.net_2(x)
x3 = self.net_3(x2.clone())
return x3
class Block(nn.Module):
def __init__(
self,
dim: int,
num_heads: int,
mlp_ratio: float = 4.0,
qkv_bias: bool = True,
norm_layer: Type[nn.Module] = nn.LayerNorm,
act_layer: Type[nn.Module] = nn.GELU,
use_rel_pos: bool = False,
rel_pos_zero_init: bool = True,
window_size: int = 0,
input_size: Optional[Tuple[int, int]] = None,
) -> None:
super().__init__()
self.norm1 = norm_layer(dim)
self.attn = Attention(
dim,
num_heads=num_heads,
qkv_bias=qkv_bias,
use_rel_pos=use_rel_pos,
rel_pos_zero_init=rel_pos_zero_init,
input_size=input_size if window_size == 0 else (window_size, window_size),
)
self.norm2 = norm_layer(dim)
self.mlp = MLPBlock(embedding_dim=dim, mlp_dim=int(dim * mlp_ratio), act=act_layer)
self.window_size = window_size
def forward(self, x: torch.Tensor) -> torch.Tensor:
shortcut = x
x = self.norm1(x)
if self.window_size > 0:
H, W = x.shape[1], x.shape[2]
x, pad_hw = window_partition(x, self.window_size)
x = self.attn(x)
if self.window_size > 0:
x = window_unpartition(x, self.window_size, pad_hw, (H, W))
x = shortcut + x
x = x + self.mlp(self.norm2(x))
return x
class Attention(nn.Module):
def __init__(
self,
dim: int,
num_heads: int = 8,
qkv_bias: bool = True,
use_rel_pos: bool = False,
rel_pos_zero_init: bool = True,
input_size: Optional[Tuple[int, int]] = None,
) -> None:
super().__init__()
self.num_heads = num_heads
head_dim = dim // num_heads
self.scale = head_dim**-0.5
self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias)
self.proj = nn.Linear(dim, dim)
self.use_rel_pos = use_rel_pos
if self.use_rel_pos:
assert (
input_size is not None
), "Input size must be provided if using relative positional encoding."
self.rel_pos_h = nn.Parameter(torch.zeros(2 * input_size[0] - 1, head_dim))
self.rel_pos_w = nn.Parameter(torch.zeros(2 * input_size[1] - 1, head_dim))
def forward(self, x: torch.Tensor) -> torch.Tensor:
B, H, W, _ = x.shape
qkv = self.qkv(x).reshape(B, H * W, 3, self.num_heads, -1).permute(2, 0, 3, 1, 4)
q, k, v = qkv.reshape(3, B * self.num_heads, H * W, -1).unbind(0)
rel_h, rel_w = None, None
if self.use_rel_pos:
rel_h, rel_w = add_decomposed_rel_pos(q, self.rel_pos_h, self.rel_pos_w, (H, W), (H, W))
q = q.view(B, self.num_heads, H * W, -1)
k = k.view(B, self.num_heads, H * W, -1)
v = v.view(B, self.num_heads, H * W, -1)
if self.use_rel_pos:
rel_h = rel_h.view(B, self.num_heads, rel_h.size(1), rel_h.size(2), rel_h.size(3))
rel_w = rel_w.view(B, self.num_heads, rel_w.size(1), rel_w.size(2), rel_w.size(3))
attn_bias = (rel_h + rel_w).view(B, self.num_heads, rel_h.size(2), rel_h.size(3) * rel_w.size(4))
x = torch.nn.functional.scaled_dot_product_attention(q, k, v, attn_mask=attn_bias)
else:
x = torch.nn.functional.scaled_dot_product_attention(q, k, v)
x = x.view(B, self.num_heads, H, W, -1).permute(0, 2, 3, 1, 4).reshape(B, H, W, -1)
x = self.proj(x)
return x
def window_partition(x: torch.Tensor, window_size: int) -> Tuple[torch.Tensor, Tuple[int, int]]:
B, H, W, C = x.shape
pad_h = (window_size - H % window_size) % window_size
pad_w = (window_size - W % window_size) % window_size
if pad_h > 0 or pad_w > 0:
x = F.pad(x, (0, 0, 0, pad_w, 0, pad_h))
Hp, Wp = H + pad_h, W + pad_w
x = x.view(B, Hp // window_size, window_size, Wp // window_size, window_size, C)
windows = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(-1, window_size, window_size, C)
return windows, (Hp, Wp)
def window_unpartition(
windows: torch.Tensor, window_size: int, pad_hw: Tuple[int, int], hw: Tuple[int, int]
) -> torch.Tensor:
Hp, Wp = pad_hw
H, W = hw
B = windows.shape[0] // (Hp * Wp // window_size // window_size)
x = windows.view(B, Hp // window_size, Wp // window_size, window_size, window_size, -1)
x = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(B, Hp, Wp, -1)
if Hp > H or Wp > W:
x = x[:, :H, :W, :].contiguous()
return x
def get_rel_pos(q_size: int, k_size: int, rel_pos: torch.Tensor) -> torch.Tensor:
max_rel_dist = int(2 * max(q_size, k_size) - 1)
if rel_pos.shape[0] != max_rel_dist:
dtype = rel_pos.dtype
rel_pos = rel_pos.to(torch.float32)
rel_pos_resized = F.interpolate(
rel_pos.reshape(1, rel_pos.shape[0], -1).permute(0, 2, 1),
size=max_rel_dist,
mode="linear",
).to(dtype)
rel_pos_resized = rel_pos_resized.reshape(-1, max_rel_dist).permute(1, 0)
else:
rel_pos_resized = rel_pos
q_coords = torch.arange(q_size, device=rel_pos.device)[:, None] * max(k_size / q_size, 1.0)
k_coords = torch.arange(k_size, device=rel_pos.device)[None, :] * max(q_size / k_size, 1.0)
relative_coords = (q_coords - k_coords) + (k_size - 1) * max(q_size / k_size, 1.0)
return rel_pos_resized[relative_coords.long()]
def add_decomposed_rel_pos(
q: torch.Tensor,
rel_pos_h: torch.Tensor,
rel_pos_w: torch.Tensor,
q_size: Tuple[int, int],
k_size: Tuple[int, int],
) -> torch.Tensor:
q_h, q_w = q_size
k_h, k_w = k_size
Rh = get_rel_pos(q_h, k_h, rel_pos_h)
Rw = get_rel_pos(q_w, k_w, rel_pos_w)
B, _, dim = q.shape
r_q = q.reshape(B, q_h, q_w, dim)
rel_h = torch.einsum("bhwc,hkc->bhwk", r_q, Rh)
rel_w = torch.einsum("bhwc,wkc->bhwk", r_q, Rw)
rel_h = rel_h.unsqueeze(-1)
rel_w = rel_w.unsqueeze(-2)
rel_h = rel_h.reshape(B, q_h * q_w, k_h, 1)
rel_w = rel_w.reshape(B, q_h * q_w, 1, k_w)
return rel_h, rel_w
class PatchEmbed(nn.Module):
def __init__(
self,
kernel_size: Tuple[int, int] = (16, 16),
stride: Tuple[int, int] = (16, 16),
padding: Tuple[int, int] = (0, 0),
in_chans: int = 3,
embed_dim: int = 768,
) -> None:
super().__init__()
self.proj = nn.Conv2d(
in_chans, embed_dim, kernel_size=kernel_size, stride=stride, padding=padding
)
def forward(self, x: torch.Tensor) -> torch.Tensor:
x = self.proj(x)
x = x.permute(0, 2, 3, 1)
return x
def build_sam_vit_b(checkpoint=None):
return _build_sam(
encoder_embed_dim=768,
encoder_depth=12,
encoder_num_heads=12,
encoder_global_attn_indexes=[2, 5, 8, 11],
checkpoint=checkpoint,
)
def build_sam_fast_vit_b(checkpoint=None, compile_mode='max-autotune', dtype=torch.bfloat16):
image_encoder = build_sam_vit_b(checkpoint).eval().to(dtype)
image_encoder = torch.compile(image_encoder, mode=compile_mode)
return image_encoder
def _build_sam(
encoder_embed_dim,
encoder_depth,
encoder_num_heads,
encoder_global_attn_indexes,
checkpoint=None,
):
prompt_embed_dim = 256
image_size = 1024
vit_patch_size = 16
image_embedding_size = image_size // vit_patch_size
image_encoder=ImageEncoderViT(
depth=encoder_depth,
embed_dim=encoder_embed_dim,
img_size=image_size,
mlp_ratio=4,
norm_layer=partial(torch.nn.LayerNorm, eps=1e-6),
num_heads=encoder_num_heads,
patch_size=vit_patch_size,
qkv_bias=True,
use_rel_pos=True,
global_attn_indexes=encoder_global_attn_indexes,
window_size=14,
out_chans=prompt_embed_dim,
)
image_encoder.eval()
if checkpoint is not None:
state_dict = torch.load(checkpoint)
image_encoder.load_state_dict({k[30:]: v for k, v in state_dict.items() if 'vision_tower_high' in k}, strict=True)
print(checkpoint)
return image_encoder