How to use from the
Use from the
Transformers library
# Use a pipeline as a high-level helper
from transformers import pipeline

pipe = pipeline("text-generation", model="jiosephlee/intern-s1-mini-assay-transfer-record-level-v27-bbb-martins-l3-best")
messages = [
    {"role": "user", "content": "Who are you?"},
]
pipe(messages)
# pip install -U transformers accelerate
# Load model directly
from transformers import AutoTokenizer, AutoModelForCausalLM

tokenizer = AutoTokenizer.from_pretrained("jiosephlee/intern-s1-mini-assay-transfer-record-level-v27-bbb-martins-l3-best")
model = AutoModelForCausalLM.from_pretrained("jiosephlee/intern-s1-mini-assay-transfer-record-level-v27-bbb-martins-l3-best", device_map="auto")
messages = [
    {"role": "user", "content": "Who are you?"},
]
inputs = tokenizer.apply_chat_template(
	messages,
	add_generation_prompt=True,
	tokenize=True,
	return_dict=True,
	return_tensors="pt",
).to(model.device)

outputs = model.generate(**inputs, max_new_tokens=256)
print(tokenizer.decode(outputs[0][inputs["input_ids"].shape[-1]:]))
Quick Links

Intern-S1-mini assay transfer V27 — BBB Martins L3

Validation-selected checkpoint from the V27 BBB Martins L3 record-level assay-transfer run.

Provenance

  • Base model: jiosephlee/Intern-S1-mini-lm
  • Base model revision: fcb667c380ae01f57693a45b4b5c2d331052a107
  • Training dataset: jiosephlee/assay-transfer-record-level-v27-bbb-martins-l3-intern
  • Dataset revision: 2a4c6848de474f0c9152e3acdf4087ce1fe16db8
  • Training configuration: 10 scheduled epochs, seed 42, 8 GPUs, device batch size 4, gradient accumulation 4, Flash Attention 2, BFD packing, and padding-free training
  • Selection metric: validation L3/overall/knn_regression_id_ood_level_macro_mae_at_3 (lower is better)
  • Selected optimizer step: 510
  • Selected validation metric: 0.5804
  • The run was intentionally stopped before completing the full scheduled training; this repository contains its saved validation-selected checkpoint.
  • Training run
  • Held-out model/Morgan comparison

Held-out test comparison

Ranker Binary macro-F1@3 Binary macro-F1@5 Regression MAE@3 Spearman@3 Top-1 hit@3
Model 0.8611 0.8611 0.7717 -0.0802 0.1408
Morgan vanilla 0.7432 0.7677 1.1246 -0.0382 0.1127
Morgan weighted 0.7345 0.7677 1.0652 -0.1077 0.1408

Lower regression MAE is better; higher values are better for the other metrics. All W&B metric names retain the L3/ prefix.

The repository contains the full Transformers checkpoint and tokenizer files. metric.json is the complete validation-selection record stored with the checkpoint.

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