encode-chrombpnet-ATAC-left-cardiac-atrium-ENCSR310UDW-ENCSR343DVA / fold_2 /logs.models.fold_2.ENCSR310UDW /logfile.modelling.fold_2.ENCSR310UDW.stderr.txt
Download fold_2/logs.models.fold_2.ENCSR310UDW/logfile.modelling.fold_2.ENCSR310UDW.stderr.txt from kundajelab/encode-chrombpnet-ATAC-left-cardiac-atrium-ENCSR310UDW-ENCSR343DVA: direct link, hf CLI and curl.
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- Download file 45.5 kB
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https://huggingface.co/kundajelab/encode-chrombpnet-ATAC-left-cardiac-atrium-ENCSR310UDW-ENCSR343DVA/resolve/main/fold_2/logs.models.fold_2.ENCSR310UDW/logfile.modelling.fold_2.ENCSR310UDW.stderr.txt
- Command line
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hf download hf://kundajelab/encode-chrombpnet-ATAC-left-cardiac-atrium-ENCSR310UDW-ENCSR343DVA/fold_2/logs.models.fold_2.ENCSR310UDW/logfile.modelling.fold_2.ENCSR310UDW.stderr.txt
-
curl -L -o logfile.modelling.fold_2.ENCSR310UDW.stderr.txt https://huggingface.co/kundajelab/encode-chrombpnet-ATAC-left-cardiac-atrium-ENCSR310UDW-ENCSR343DVA/resolve/main/fold_2/logs.models.fold_2.ENCSR310UDW/logfile.modelling.fold_2.ENCSR310UDW.stderr.txt
45.5 kB
| INFO: underlay of /etc/localtime required more than 50 (88) bind mounts | |
| INFO: underlay of /usr/bin/nvidia-smi required more than 50 (355) bind mounts | |
| INFO: underlay of /etc/localtime required more than 50 (88) bind mounts | |
| INFO: underlay of /usr/bin/nvidia-smi required more than 50 (355) bind mounts | |
| 2023-01-23 23:25:53.392136: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-23 23:33:34.833276: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-23 23:33:34.837417: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2023-01-23 23:33:34.880479: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-23 23:33:34.880609: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-23 23:33:34.906264: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-23 23:33:34.906358: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-23 23:33:34.919107: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-23 23:33:34.924847: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-23 23:33:34.946160: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-23 23:33:34.951578: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-23 23:33:34.952925: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-23 23:33:34.954940: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-23 23:33:34.955308: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2023-01-23 23:33:34.956200: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-23 23:33:34.956500: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-23 23:33:34.956539: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-23 23:33:34.956568: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-23 23:33:34.956617: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-23 23:33:34.956644: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-23 23:33:34.956670: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-23 23:33:34.956696: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-23 23:33:34.956722: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-23 23:33:34.956749: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-23 23:33:34.957249: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-23 23:33:34.958535: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-23 23:33:36.696322: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2023-01-23 23:33:36.696402: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2023-01-23 23:33:36.696420: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2023-01-23 23:33:36.700160: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10902 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:03:00.0, compute capability: 7.0) | |
| 2023-01-23 23:33:39.047047: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2023-01-23 23:33:39.061722: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400015000 Hz | |
| 2023-01-23 23:33:39.286150: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-23 23:33:40.377505: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-23 23:33:40.386528: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-23 23:34:44.517048: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-23 23:34:46.873973: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-23 23:34:46.875078: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2023-01-23 23:34:46.909018: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-23 23:34:46.909106: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-23 23:34:46.912293: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-23 23:34:46.912369: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-23 23:34:46.913780: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-23 23:34:46.914121: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-23 23:34:46.917128: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-23 23:34:46.917833: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-23 23:34:46.918143: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-23 23:34:46.918710: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-23 23:34:46.919036: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2023-01-23 23:34:46.919121: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-23 23:34:46.919409: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-23 23:34:46.919438: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-23 23:34:46.919463: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-23 23:34:46.919485: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-23 23:34:46.919507: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-23 23:34:46.919528: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-23 23:34:46.919549: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-23 23:34:46.919570: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-23 23:34:46.919613: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-23 23:34:46.920071: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-23 23:34:46.920109: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-23 23:34:47.478897: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2023-01-23 23:34:47.478987: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2023-01-23 23:34:47.479005: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2023-01-23 23:34:47.479962: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10902 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:03:00.0, compute capability: 7.0) | |
| 2023-01-23 23:42:47.670430: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2023-01-23 23:42:47.670982: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400015000 Hz | |
| 2023-01-23 23:42:49.593134: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-23 23:42:49.862019: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-23 23:42:49.882778: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| WARNING:tensorflow:Callback method `on_train_batch_end` is slow compared to the batch time (batch time: 0.2078s vs `on_train_batch_end` time: 0.2977s). Check your callbacks. | |
| 2023-01-24 08:02:49.119417: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:02:53.244940: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:02:53.249749: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2023-01-24 08:02:53.291855: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:02:53.291952: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:02:53.311528: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:02:53.311712: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:02:53.322751: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:02:53.325410: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:02:53.344991: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:02:53.347280: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:02:53.347957: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:02:53.350290: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:02:53.350660: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2023-01-24 08:02:53.350750: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:02:53.351052: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:02:53.351084: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:02:53.351115: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:02:53.351139: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:02:53.351163: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:02:53.351187: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:02:53.351210: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:02:53.351233: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:02:53.351257: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:02:53.351702: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:02:53.353107: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:02:55.322157: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2023-01-24 08:02:55.322250: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2023-01-24 08:02:55.322267: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2023-01-24 08:02:55.323425: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10902 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:03:00.0, compute capability: 7.0) | |
| 2023-01-24 08:04:44.056508: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2023-01-24 08:04:44.063221: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400015000 Hz | |
| 2023-01-24 08:04:44.220342: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:04:45.322118: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:04:45.325429: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| /opt/conda/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: is not loaded, but a Lambda layer uses it. It may cause errors. | |
| , UserWarning) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:69: RuntimeWarning: invalid value encountered in true_divide | |
| cur_jsd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),pred_probs[idx,:]) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/utils/metrics_utils.py:196: RuntimeWarning: invalid value encountered in true_divide | |
| profile_prob = profile / np.sum(profile) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:78: RuntimeWarning: invalid value encountered in true_divide | |
| shuffled_labels_prob=shuffled_labels/np.nansum(shuffled_labels) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:88: RuntimeWarning: invalid value encountered in true_divide | |
| curr_jsd_rnd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),shuffled_labels_prob) | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| 2023-01-24 08:11:02.294918: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:11:05.138662: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:11:05.139862: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2023-01-24 08:11:05.175083: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:11:05.175150: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:11:05.178254: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:11:05.178315: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:11:05.179795: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:11:05.180176: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:11:05.183293: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:11:05.184052: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:11:05.184405: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:11:05.185030: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:11:05.185354: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2023-01-24 08:11:05.185436: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:11:05.185755: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:11:05.185803: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:11:05.185833: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:11:05.185860: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:11:05.185946: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:11:05.186011: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:11:05.186047: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:11:05.186075: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:11:05.186104: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:11:05.186589: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:11:05.186627: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:11:05.762467: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2023-01-24 08:11:05.762552: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2023-01-24 08:11:05.762569: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2023-01-24 08:11:05.764285: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10902 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:03:00.0, compute capability: 7.0) | |
| WARNING:tensorflow:No training configuration found in the save file, so the model was *not* compiled. Compile it manually. | |
| 2023-01-24 08:12:44.868444: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2023-01-24 08:12:44.871045: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400015000 Hz | |
| 2023-01-24 08:12:44.938965: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:12:45.335127: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:12:45.336698: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:69: RuntimeWarning: invalid value encountered in true_divide | |
| cur_jsd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),pred_probs[idx,:]) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/utils/metrics_utils.py:196: RuntimeWarning: invalid value encountered in true_divide | |
| profile_prob = profile / np.sum(profile) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:78: RuntimeWarning: invalid value encountered in true_divide | |
| shuffled_labels_prob=shuffled_labels/np.nansum(shuffled_labels) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:88: RuntimeWarning: invalid value encountered in true_divide | |
| curr_jsd_rnd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),shuffled_labels_prob) | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| 2023-01-24 08:18:37.009963: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:18:39.867630: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:18:39.868869: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2023-01-24 08:18:39.903807: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:18:39.903876: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:18:39.907185: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:18:39.907243: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:18:39.909014: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:18:39.909334: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:18:39.912610: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:18:39.913328: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:18:39.913714: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:18:39.914292: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:18:39.914640: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2023-01-24 08:18:39.914722: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:18:39.915019: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:18:39.915048: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:18:39.915086: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:18:39.915111: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:18:39.915133: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:18:39.915155: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:18:39.915177: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:18:39.915198: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:18:39.915220: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:18:39.915702: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:18:39.915742: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:18:40.491872: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2023-01-24 08:18:40.491966: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2023-01-24 08:18:40.491984: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2023-01-24 08:18:40.492971: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10902 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:03:00.0, compute capability: 7.0) | |
| 2023-01-24 08:20:20.546268: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2023-01-24 08:20:20.548311: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400015000 Hz | |
| 2023-01-24 08:20:20.592489: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:20:20.838009: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:20:20.839604: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:69: RuntimeWarning: invalid value encountered in true_divide | |
| cur_jsd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),pred_probs[idx,:]) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/utils/metrics_utils.py:196: RuntimeWarning: invalid value encountered in true_divide | |
| profile_prob = profile / np.sum(profile) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:78: RuntimeWarning: invalid value encountered in true_divide | |
| shuffled_labels_prob=shuffled_labels/np.nansum(shuffled_labels) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:88: RuntimeWarning: invalid value encountered in true_divide | |
| curr_jsd_rnd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),shuffled_labels_prob) | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| mkdir: cannot create directory ‘/scratch/groups/akundaje/anusri/chromatin_atlas/ATAC/ENCSR310UDW//chrombpnet_model_feb15_fold_2//footprints’: File exists | |
| 2023-01-24 08:22:06.165730: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:22:07.648146: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:22:07.649310: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2023-01-24 08:22:07.682253: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:22:07.682330: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:22:07.685819: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:22:07.685915: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:22:07.687277: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:22:07.687610: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:22:07.691026: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:22:07.691718: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:22:07.692059: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:22:07.692606: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:22:07.692945: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2023-01-24 08:22:07.693023: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:22:07.693462: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:22:07.693505: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:22:07.693535: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:22:07.693562: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:22:07.693599: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:22:07.693627: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:22:07.693668: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:22:07.693707: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:22:07.693732: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:22:07.694252: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:22:07.694298: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:22:08.277223: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2023-01-24 08:22:08.277324: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2023-01-24 08:22:08.277342: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2023-01-24 08:22:08.278302: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10902 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:03:00.0, compute capability: 7.0) | |
| WARNING:tensorflow:No training configuration found in the save file, so the model was *not* compiled. Compile it manually. | |
| 2023-01-24 08:22:36.896675: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2023-01-24 08:22:36.897244: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400015000 Hz | |
| 2023-01-24 08:22:37.160594: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:22:37.497301: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:22:37.499194: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:22:42.606998: W tensorflow/core/common_runtime/bfc_allocator.cc:248] Allocator (GPU_0_bfc) ran out of memory trying to allocate 3.96GiB with freed_by_count=0. The caller indicates that this is not a failure, but may mean that there could be performance gains if more memory were available. | |
| 2023-01-24 08:22:42.607466: W tensorflow/core/common_runtime/bfc_allocator.cc:248] Allocator (GPU_0_bfc) ran out of memory trying to allocate 3.96GiB with freed_by_count=0. The caller indicates that this is not a failure, but may mean that there could be performance gains if more memory were available. | |
| 2023-01-24 08:22:43.103902: W tensorflow/core/common_runtime/bfc_allocator.cc:248] Allocator (GPU_0_bfc) ran out of memory trying to allocate 3.77GiB with freed_by_count=0. The caller indicates that this is not a failure, but may mean that there could be performance gains if more memory were available. | |
| 2023-01-24 08:22:43.104367: W tensorflow/core/common_runtime/bfc_allocator.cc:248] Allocator (GPU_0_bfc) ran out of memory trying to allocate 3.77GiB with freed_by_count=0. The caller indicates that this is not a failure, but may mean that there could be performance gains if more memory were available. | |
| mkdir: cannot create directory ‘/scratch/groups/akundaje/anusri/chromatin_atlas/ATAC/ENCSR310UDW//chrombpnet_model_feb15_fold_2//footprints’: File exists | |
| 2023-01-24 08:35:52.195316: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:35:53.665118: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:35:53.666292: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2023-01-24 08:35:53.700935: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:35:53.701014: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:35:53.704494: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:35:53.704587: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:35:53.705955: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:35:53.706264: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:35:53.709284: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:35:53.710019: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:35:53.710363: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:35:53.710981: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:35:53.711406: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2023-01-24 08:35:53.711524: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2023-01-24 08:35:53.711817: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:03:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.77GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2023-01-24 08:35:53.711858: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:35:53.711888: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:35:53.711915: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:35:53.711948: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2023-01-24 08:35:53.711973: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2023-01-24 08:35:53.711999: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2023-01-24 08:35:53.712024: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2023-01-24 08:35:53.712049: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2023-01-24 08:35:53.713416: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2023-01-24 08:35:53.713475: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2023-01-24 08:35:54.272096: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2023-01-24 08:35:54.272198: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2023-01-24 08:35:54.272249: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2023-01-24 08:35:54.274149: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10902 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:03:00.0, compute capability: 7.0) | |
| 2023-01-24 08:36:22.792003: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2023-01-24 08:36:22.792659: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400015000 Hz | |
| 2023-01-24 08:36:22.963331: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2023-01-24 08:36:23.284888: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2023-01-24 08:36:23.286630: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |