encode-chrombpnet-DNASE-dorsolateral-prefrontal-cortex-ENCSR570BWW-ENCSR317UTQ / fold_1 /logs.models.fold_1.ENCSR570BWW /logfile.modelling.fold_1.ENCSR570BWW.stderr.txt
Download fold_1/logs.models.fold_1.ENCSR570BWW/logfile.modelling.fold_1.ENCSR570BWW.stderr.txt from kundajelab/encode-chrombpnet-DNASE-dorsolateral-prefrontal-cortex-ENCSR570BWW-ENCSR317UTQ: direct link, hf CLI and curl.
- Browser
- Download file 45.4 kB
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https://huggingface.co/kundajelab/encode-chrombpnet-DNASE-dorsolateral-prefrontal-cortex-ENCSR570BWW-ENCSR317UTQ/resolve/main/fold_1/logs.models.fold_1.ENCSR570BWW/logfile.modelling.fold_1.ENCSR570BWW.stderr.txt
- Command line
-
hf download hf://kundajelab/encode-chrombpnet-DNASE-dorsolateral-prefrontal-cortex-ENCSR570BWW-ENCSR317UTQ/fold_1/logs.models.fold_1.ENCSR570BWW/logfile.modelling.fold_1.ENCSR570BWW.stderr.txt
-
curl -L -o logfile.modelling.fold_1.ENCSR570BWW.stderr.txt https://huggingface.co/kundajelab/encode-chrombpnet-DNASE-dorsolateral-prefrontal-cortex-ENCSR570BWW-ENCSR317UTQ/resolve/main/fold_1/logs.models.fold_1.ENCSR570BWW/logfile.modelling.fold_1.ENCSR570BWW.stderr.txt
45.4 kB
| INFO: underlay of /etc/localtime required more than 50 (88) bind mounts | |
| INFO: underlay of /usr/bin/nvidia-smi required more than 50 (355) bind mounts | |
| INFO: underlay of /etc/localtime required more than 50 (88) bind mounts | |
| INFO: underlay of /usr/bin/nvidia-smi required more than 50 (355) bind mounts | |
| 2022-10-15 03:52:56.658674: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 04:01:51.029224: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 04:01:51.034115: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2022-10-15 04:01:51.093135: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 04:01:51.093230: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 04:01:51.121059: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 04:01:51.121154: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 04:01:51.135395: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 04:01:51.142207: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 04:01:51.166592: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 04:01:51.172713: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 04:01:51.174084: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 04:01:51.182099: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 04:01:51.182547: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2022-10-15 04:01:51.183557: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 04:01:51.184054: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 04:01:51.184093: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 04:01:51.184120: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 04:01:51.184144: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 04:01:51.184167: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 04:01:51.184191: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 04:01:51.184214: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 04:01:51.184237: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 04:01:51.184260: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 04:01:51.185154: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 04:01:51.186674: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 04:01:53.156334: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2022-10-15 04:01:53.156427: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2022-10-15 04:01:53.156445: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2022-10-15 04:01:53.163751: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10912 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:88:00.0, compute capability: 7.0) | |
| 2022-10-15 04:01:55.035896: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2022-10-15 04:01:55.052981: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400085000 Hz | |
| 2022-10-15 04:01:55.300974: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 04:01:56.525107: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 04:01:56.535501: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 04:02:46.765919: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 04:02:49.059874: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 04:02:49.061153: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2022-10-15 04:02:49.114988: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 04:02:49.115078: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 04:02:49.118298: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 04:02:49.118366: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 04:02:49.119776: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 04:02:49.120120: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 04:02:49.123380: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 04:02:49.124163: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 04:02:49.124520: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 04:02:49.127625: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 04:02:49.128035: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2022-10-15 04:02:49.128132: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 04:02:49.129139: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 04:02:49.129177: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 04:02:49.129208: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 04:02:49.129235: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 04:02:49.129260: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 04:02:49.129285: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 04:02:49.129315: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 04:02:49.129342: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 04:02:49.129367: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 04:02:49.131594: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 04:02:49.131648: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 04:02:49.810217: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2022-10-15 04:02:49.810341: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2022-10-15 04:02:49.810362: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2022-10-15 04:02:49.813141: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10912 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:88:00.0, compute capability: 7.0) | |
| 2022-10-15 04:10:56.192201: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2022-10-15 04:10:56.192709: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400085000 Hz | |
| 2022-10-15 04:10:58.165578: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 04:10:58.477481: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 04:10:58.499572: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| WARNING:tensorflow:Callback method `on_train_batch_end` is slow compared to the batch time (batch time: 0.2094s vs `on_train_batch_end` time: 0.2966s). Check your callbacks. | |
| 2022-10-15 08:58:22.912958: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 08:58:26.222314: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 08:58:26.223624: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2022-10-15 08:58:26.278839: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 08:58:26.278930: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 08:58:26.282341: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 08:58:26.282424: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 08:58:26.283931: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 08:58:26.284283: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 08:58:26.287583: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 08:58:26.288397: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 08:58:26.288790: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 08:58:26.289705: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 08:58:26.290062: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2022-10-15 08:58:26.290147: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 08:58:26.290659: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 08:58:26.290692: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 08:58:26.290720: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 08:58:26.290745: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 08:58:26.290768: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 08:58:26.290792: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 08:58:26.290816: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 08:58:26.290839: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 08:58:26.290863: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 08:58:26.291694: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 08:58:26.291734: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 08:58:26.984637: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2022-10-15 08:58:26.984758: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2022-10-15 08:58:26.984777: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2022-10-15 08:58:26.986986: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10912 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:88:00.0, compute capability: 7.0) | |
| 2022-10-15 09:00:55.320136: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2022-10-15 09:00:55.324622: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400085000 Hz | |
| 2022-10-15 09:00:55.443730: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:00:55.717913: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:00:55.720263: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| /opt/conda/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: is not loaded, but a Lambda layer uses it. It may cause errors. | |
| , UserWarning) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:69: RuntimeWarning: invalid value encountered in true_divide | |
| cur_jsd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),pred_probs[idx,:]) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/utils/metrics_utils.py:196: RuntimeWarning: invalid value encountered in true_divide | |
| profile_prob = profile / np.sum(profile) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:78: RuntimeWarning: invalid value encountered in true_divide | |
| shuffled_labels_prob=shuffled_labels/np.nansum(shuffled_labels) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:88: RuntimeWarning: invalid value encountered in true_divide | |
| curr_jsd_rnd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),shuffled_labels_prob) | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| 2022-10-15 09:06:30.575250: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:06:33.689558: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 09:06:33.690868: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2022-10-15 09:06:33.757768: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 09:06:33.757857: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:06:33.761171: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:06:33.761233: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:06:33.762660: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 09:06:33.763009: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 09:06:33.766266: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 09:06:33.767085: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 09:06:33.767565: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 09:06:33.769387: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 09:06:33.769746: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2022-10-15 09:06:33.769836: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 09:06:33.770319: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 09:06:33.770354: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:06:33.770387: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:06:33.770416: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:06:33.770444: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 09:06:33.770472: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 09:06:33.770499: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 09:06:33.770527: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 09:06:33.770555: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 09:06:33.771375: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 09:06:33.771431: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:06:34.494953: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2022-10-15 09:06:34.495048: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2022-10-15 09:06:34.495083: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2022-10-15 09:06:34.497654: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10912 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:88:00.0, compute capability: 7.0) | |
| WARNING:tensorflow:No training configuration found in the save file, so the model was *not* compiled. Compile it manually. | |
| 2022-10-15 09:08:48.571277: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2022-10-15 09:08:48.574349: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400085000 Hz | |
| 2022-10-15 09:08:48.649169: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:08:48.940656: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:08:48.942455: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:69: RuntimeWarning: invalid value encountered in true_divide | |
| cur_jsd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),pred_probs[idx,:]) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/utils/metrics_utils.py:196: RuntimeWarning: invalid value encountered in true_divide | |
| profile_prob = profile / np.sum(profile) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:78: RuntimeWarning: invalid value encountered in true_divide | |
| shuffled_labels_prob=shuffled_labels/np.nansum(shuffled_labels) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:88: RuntimeWarning: invalid value encountered in true_divide | |
| curr_jsd_rnd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),shuffled_labels_prob) | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| 2022-10-15 09:14:12.062952: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:14:15.158387: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 09:14:15.159685: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2022-10-15 09:14:15.222781: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 09:14:15.222880: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:14:15.226410: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:14:15.226476: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:14:15.227962: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 09:14:15.228322: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 09:14:15.231587: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 09:14:15.232419: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 09:14:15.232834: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 09:14:15.233777: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 09:14:15.234131: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2022-10-15 09:14:15.234219: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 09:14:15.236260: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 09:14:15.236311: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:14:15.236365: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:14:15.236394: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:14:15.236419: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 09:14:15.236460: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 09:14:15.236485: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 09:14:15.236510: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 09:14:15.236535: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 09:14:15.238204: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 09:14:15.238248: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:14:15.947773: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2022-10-15 09:14:15.947888: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2022-10-15 09:14:15.947908: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2022-10-15 09:14:15.950506: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10912 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:88:00.0, compute capability: 7.0) | |
| 2022-10-15 09:16:29.551485: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2022-10-15 09:16:29.553622: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400085000 Hz | |
| 2022-10-15 09:16:29.602897: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:16:29.888196: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:16:29.889888: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:69: RuntimeWarning: invalid value encountered in true_divide | |
| cur_jsd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),pred_probs[idx,:]) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/utils/metrics_utils.py:196: RuntimeWarning: invalid value encountered in true_divide | |
| profile_prob = profile / np.sum(profile) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:78: RuntimeWarning: invalid value encountered in true_divide | |
| shuffled_labels_prob=shuffled_labels/np.nansum(shuffled_labels) | |
| /home/users/anusri/chromatin-atlas-anvil/sherlock/chrombpnet/src/training/metrics.py:88: RuntimeWarning: invalid value encountered in true_divide | |
| curr_jsd_rnd=jensenshannon(true_counts[idx,:]/np.nansum(true_counts[idx,:]),shuffled_labels_prob) | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| findfont: Font family ['normal'] not found. Falling back to DejaVu Sans. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| No artists with labels found to put in legend. Note that artists whose label start with an underscore are ignored when legend() is called with no argument. | |
| 2022-10-15 09:18:16.643202: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:18:18.245356: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 09:18:18.246522: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2022-10-15 09:18:18.310080: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 09:18:18.310182: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:18:18.313455: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:18:18.313522: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:18:18.314992: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 09:18:18.315393: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 09:18:18.318816: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 09:18:18.319664: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 09:18:18.320095: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 09:18:18.321696: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 09:18:18.322057: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2022-10-15 09:18:18.322151: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 09:18:18.322637: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 09:18:18.322678: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:18:18.322707: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:18:18.322733: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:18:18.322758: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 09:18:18.322784: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 09:18:18.322809: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 09:18:18.322834: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 09:18:18.322859: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 09:18:18.323688: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 09:18:18.323756: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:18:19.032918: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2022-10-15 09:18:19.033014: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2022-10-15 09:18:19.033032: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2022-10-15 09:18:19.034535: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10912 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:88:00.0, compute capability: 7.0) | |
| WARNING:tensorflow:No training configuration found in the save file, so the model was *not* compiled. Compile it manually. | |
| 2022-10-15 09:18:41.913669: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2022-10-15 09:18:41.914300: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400085000 Hz | |
| 2022-10-15 09:18:42.189174: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:18:42.577870: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:18:42.579827: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 09:18:47.919949: W tensorflow/core/common_runtime/bfc_allocator.cc:248] Allocator (GPU_0_bfc) ran out of memory trying to allocate 3.96GiB with freed_by_count=0. The caller indicates that this is not a failure, but may mean that there could be performance gains if more memory were available. | |
| 2022-10-15 09:18:47.920529: W tensorflow/core/common_runtime/bfc_allocator.cc:248] Allocator (GPU_0_bfc) ran out of memory trying to allocate 3.96GiB with freed_by_count=0. The caller indicates that this is not a failure, but may mean that there could be performance gains if more memory were available. | |
| 2022-10-15 09:18:48.417028: W tensorflow/core/common_runtime/bfc_allocator.cc:248] Allocator (GPU_0_bfc) ran out of memory trying to allocate 3.77GiB with freed_by_count=0. The caller indicates that this is not a failure, but may mean that there could be performance gains if more memory were available. | |
| 2022-10-15 09:18:48.417523: W tensorflow/core/common_runtime/bfc_allocator.cc:248] Allocator (GPU_0_bfc) ran out of memory trying to allocate 3.77GiB with freed_by_count=0. The caller indicates that this is not a failure, but may mean that there could be performance gains if more memory were available. | |
| mkdir: cannot create directory ‘/scratch/groups/akundaje/anusri/chromatin_atlas/DNASE/ENCSR570BWW//chrombppnet_model_encsr880cub_bias_fold_1//footprints’: File exists | |
| 2022-10-15 09:22:43.406541: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:22:45.016752: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 09:22:45.017946: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 | |
| 2022-10-15 09:22:45.077021: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 09:22:45.077127: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:22:45.080535: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:22:45.080601: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:22:45.082100: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 09:22:45.082452: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 09:22:45.085798: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 09:22:45.086605: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 09:22:45.087009: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 09:22:45.090167: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 09:22:45.090545: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA | |
| To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. | |
| 2022-10-15 09:22:45.090655: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set | |
| 2022-10-15 09:22:45.091800: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: | |
| pciBusID: 0000:88:00.0 name: NVIDIA TITAN V computeCapability: 7.0 | |
| coreClock: 1.455GHz coreCount: 80 deviceMemorySize: 11.78GiB deviceMemoryBandwidth: 607.97GiB/s | |
| 2022-10-15 09:22:45.091845: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:22:45.091874: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:22:45.091899: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:22:45.091924: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 | |
| 2022-10-15 09:22:45.091947: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 | |
| 2022-10-15 09:22:45.091971: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 | |
| 2022-10-15 09:22:45.091995: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 | |
| 2022-10-15 09:22:45.092019: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |
| 2022-10-15 09:22:45.095115: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 | |
| 2022-10-15 09:22:45.095176: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 | |
| 2022-10-15 09:22:45.779632: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: | |
| 2022-10-15 09:22:45.779725: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 | |
| 2022-10-15 09:22:45.779743: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N | |
| 2022-10-15 09:22:45.781194: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10912 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN V, pci bus id: 0000:88:00.0, compute capability: 7.0) | |
| 2022-10-15 09:23:08.376587: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) | |
| 2022-10-15 09:23:08.377239: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400085000 Hz | |
| 2022-10-15 09:23:08.566012: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 | |
| 2022-10-15 09:23:08.933357: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 | |
| 2022-10-15 09:23:08.935311: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 | |