{ "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| B cell | 15921 | 0.99 | 0.99 | 0.97 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 1.00 |\n| CD4-positive, alpha-beta T cell | 10228 | 0.40 | 0.81 | 0.80 | 0.79 | 0.00 | 0.42 | 0.34 | 0.51 | 0.75 |\n| CD8-positive, alpha-beta T cell | 8293 | 0.75 | 0.81 | 0.82 | 0.78 | 0.00 | 0.71 | 0.58 | 0.68 | 0.82 |\n| neutrophil | 17440 | 0.99 | 1.00 | 0.96 | 1.00 | 0.00 | 0.94 | 0.97 | 0.97 | 0.99 |\n| macrophage | 12654 | 0.93 | 0.93 | 0.92 | 0.90 | 0.00 | 0.87 | 0.87 | 0.88 | 0.95 |\n| plasma cell | 6650 | 0.98 | 0.99 | 0.87 | 0.98 | 0.00 | 0.98 | 0.98 | 0.98 | 0.99 |\n| monocyte | 7170 | 0.03 | 0.24 | 0.79 | 0.29 | 0.00 | 0.18 | 0.28 | 0.27 | 0.18 |\n| classical monocyte | 3217 | 0.39 | 0.47 | 0.62 | 0.39 | 0.00 | 0.37 | 0.31 | 0.36 | 0.42 |\n| erythrocyte | 1496 | 0.98 | 0.99 | 0.85 | 0.99 | 0.00 | 0.97 | 0.96 | 0.98 | 0.98 |\n| natural killer cell | 1805 | 0.65 | 0.74 | 0.77 | 0.71 | 0.00 | 0.68 | 0.64 | 0.70 | 0.73 |\n| naive thymus-derived CD4-positive, alpha-beta T cell | 1264 | 0.15 | 0.06 | 0.35 | 0.02 | 0.00 | 0.25 | 0.19 | 0.29 | 0.23 |\n| T cell | 476 | 0.41 | 0.38 | 0.66 | 0.44 | 0.00 | 0.33 | 0.27 | 0.45 | 0.51 |\n| mast cell | 383 | 0.48 | 0.55 | 0.82 | 0.54 | 0.00 | 0.79 | 0.76 | 0.66 | 0.71 |\n| intermediate monocyte | 379 | 0.07 | 0.15 | 0.36 | 0.09 | 0.00 | 0.05 | 0.06 | 0.08 | 0.09 |\n| mature NK T cell | 1096 | 0.64 | 0.65 | 0.60 | 0.54 | 0.00 | 0.57 | 0.49 | 0.56 | 0.67 |\n| mononuclear phagocyte | 62 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.04 | 0.05 | 0.00 |\n| CD4-positive, alpha-beta thymocyte | 5 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 |\n| regulatory T cell | 536 | 0.34 | 0.00 | 0.22 | 0.03 | 0.00 | 0.33 | 0.35 | 0.55 | 0.49 |\n| hematopoietic precursor cell | 125 | 0.23 | 0.53 | 0.55 | 0.46 | 0.00 | 0.22 | 0.24 | 0.27 | 0.40 |\n| gamma-delta T cell | 517 | 0.83 | 0.27 | 0.72 | 0.26 | 0.00 | 0.32 | 0.75 | 0.73 | 0.81 |\n| basophil | 584 | 0.15 | 0.03 | 0.91 | 0.09 | 0.00 | 0.81 | 0.75 | 0.75 | 0.71 |\n| tissue-resident macrophage | 18 | 0.73 | 0.00 | 0.05 | 0.04 | 0.00 | 0.03 | 0.26 | 0.16 | 0.27 |\n| non-classical monocyte | 214 | 0.31 | 0.45 | 0.39 | 0.33 | 0.00 | 0.15 | 0.21 | 0.27 | 0.44 |\n| activated CD8-positive, alpha-beta T cell | 9 | 0.11 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.03 | 0.13 |\n| naive thymus-derived CD8-positive, alpha-beta T cell | 86 | 0.13 | 0.00 | 0.18 | 0.02 | 0.00 | 0.16 | 0.07 | 0.08 | 0.24 |\n| myeloid leukocyte | 237 | 0.49 | 0.02 | 0.40 | 0.02 | 0.00 | 0.08 | 0.28 | 0.29 | 0.40 |\n| erythroid progenitor cell | 81 | 0.61 | 0.74 | 0.70 | 0.67 | 0.00 | 0.48 | 0.71 | 0.72 | 0.71 |\n| innate lymphoid cell | 209 | 0.36 | 0.15 | 0.26 | 0.08 | 0.00 | 0.19 | 0.29 | 0.41 | 0.43 |\n| hematopoietic stem cell | 51 | 0.62 | 0.59 | 0.64 | 0.59 | 0.00 | 0.47 | 0.53 | 0.63 | 0.65 |\n| granulocyte | 20 | 0.09 | 0.00 | 0.00 | 0.00 | 0.00 | 0.01 | 0.01 | 0.03 | 0.00 |\n| CD8-positive, alpha-beta thymocyte | 4 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.05 | 0.00 |\n| activated CD4-positive, alpha-beta T cell | 4 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.01 | 0.01 |\n| myeloid dendritic cell | 70 | 0.16 | 0.14 | 0.34 | 0.05 | 0.00 | 0.11 | 0.14 | 0.13 | 0.18 |\n| platelet | 131 | 0.76 | 0.92 | 0.84 | 0.96 | 0.00 | 0.68 | 0.71 | 0.76 | 0.85 |\n| common myeloid progenitor | 5 | 0.00 | 0.12 | 0.07 | 0.10 | 0.00 | 0.04 | 0.00 | 0.15 | 0.07 |\n| thymocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| microglial cell | 89 | 0.50 | 0.00 | 0.04 | 0.00 | 0.00 | 0.33 | 0.40 | 0.36 | 0.42 |\n| colon macrophage | 118 | 0.21 | 0.00 | 0.73 | 0.00 | 0.00 | 0.00 | 0.29 | 0.40 | 0.65 |\n| leukocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| hematopoietic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| plasmacytoid dendritic cell | 31 | 0.92 | 0.44 | 0.36 | 0.17 | 0.00 | 0.12 | 0.58 | 0.57 | 0.81 |\n| myeloid cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| Langerhans cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| T follicular helper cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| erythroid lineage cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |", "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| B cell | 98572 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.98 | 0.98 | 0.99 | 0.99 |\n| CD4-positive, alpha-beta T cell | 86890 | 0.58 | 0.81 | 0.85 | 0.80 | 0.00 | 0.56 | 0.41 | 0.59 | 0.81 |\n| CD8-positive, alpha-beta T cell | 67971 | 0.68 | 0.80 | 0.84 | 0.79 | 0.00 | 0.69 | 0.54 | 0.65 | 0.81 |\n| neutrophil | 52085 | 0.96 | 0.98 | 0.98 | 0.98 | 0.00 | 0.95 | 0.95 | 0.95 | 0.98 |\n| macrophage | 56393 | 0.82 | 0.84 | 0.92 | 0.86 | 0.00 | 0.81 | 0.70 | 0.74 | 0.91 |\n| plasma cell | 20697 | 0.96 | 0.98 | 0.98 | 0.99 | 0.00 | 0.98 | 0.96 | 0.98 | 0.99 |\n| monocyte | 18581 | 0.48 | 0.47 | 0.79 | 0.59 | 0.00 | 0.49 | 0.45 | 0.56 | 0.67 |\n| classical monocyte | 14982 | 0.66 | 0.70 | 0.83 | 0.71 | 0.00 | 0.71 | 0.64 | 0.74 | 0.79 |\n| erythrocyte | 13115 | 0.97 | 0.97 | 0.97 | 0.98 | 0.00 | 0.96 | 0.96 | 0.97 | 0.98 |\n| natural killer cell | 12426 | 0.70 | 0.77 | 0.81 | 0.77 | 0.00 | 0.74 | 0.69 | 0.74 | 0.77 |\n| naive thymus-derived CD4-positive, alpha-beta T cell | 8563 | 0.23 | 0.11 | 0.34 | 0.04 | 0.00 | 0.29 | 0.23 | 0.32 | 0.32 |\n| T cell | 5814 | 0.42 | 0.37 | 0.64 | 0.25 | 0.00 | 0.39 | 0.36 | 0.45 | 0.59 |\n| mast cell | 5835 | 0.87 | 0.89 | 0.96 | 0.91 | 0.00 | 0.96 | 0.90 | 0.92 | 0.95 |\n| intermediate monocyte | 5099 | 0.36 | 0.21 | 0.64 | 0.38 | 0.00 | 0.34 | 0.38 | 0.49 | 0.57 |\n| mature NK T cell | 4298 | 0.50 | 0.52 | 0.67 | 0.49 | 0.00 | 0.53 | 0.39 | 0.49 | 0.63 |\n| mononuclear phagocyte | 5274 | 0.70 | 0.00 | 0.91 | 0.39 | 0.00 | 0.86 | 0.63 | 0.63 | 0.89 |\n| CD4-positive, alpha-beta thymocyte | 4680 | 0.41 | 0.02 | 0.68 | 0.36 | 0.00 | 0.62 | 0.39 | 0.50 | 0.69 |\n| regulatory T cell | 2112 | 0.23 | 0.05 | 0.45 | 0.05 | 0.00 | 0.24 | 0.25 | 0.34 | 0.46 |\n| hematopoietic precursor cell | 2015 | 0.52 | 0.69 | 0.81 | 0.76 | 0.00 | 0.55 | 0.60 | 0.63 | 0.74 |\n| gamma-delta T cell | 1460 | 0.45 | 0.34 | 0.77 | 0.29 | 0.00 | 0.41 | 0.44 | 0.43 | 0.76 |\n| basophil | 1085 | 0.54 | 0.06 | 0.92 | 0.50 | 0.00 | 0.82 | 0.64 | 0.70 | 0.86 |\n| tissue-resident macrophage | 1337 | 0.64 | 0.00 | 0.86 | 0.56 | 0.00 | 0.68 | 0.53 | 0.57 | 0.77 |\n| non-classical monocyte | 1070 | 0.22 | 0.37 | 0.46 | 0.32 | 0.00 | 0.24 | 0.34 | 0.41 | 0.56 |\n| activated CD8-positive, alpha-beta T cell | 1138 | 0.35 | 0.03 | 0.28 | 0.13 | 0.00 | 0.57 | 0.26 | 0.35 | 0.62 |\n| naive thymus-derived CD8-positive, alpha-beta T cell | 970 | 0.13 | 0.00 | 0.53 | 0.11 | 0.00 | 0.21 | 0.15 | 0.18 | 0.34 |\n| myeloid leukocyte | 762 | 0.15 | 0.00 | 0.64 | 0.03 | 0.00 | 0.58 | 0.24 | 0.24 | 0.67 |\n| erythroid progenitor cell | 890 | 0.59 | 0.63 | 0.81 | 0.71 | 0.00 | 0.63 | 0.76 | 0.74 | 0.76 |\n| innate lymphoid cell | 762 | 0.21 | 0.20 | 0.49 | 0.32 | 0.00 | 0.51 | 0.22 | 0.26 | 0.46 |\n| hematopoietic stem cell | 807 | 0.68 | 0.78 | 0.83 | 0.78 | 0.00 | 0.71 | 0.79 | 0.85 | 0.86 |\n| granulocyte | 749 | 0.13 | 0.02 | 0.72 | 0.53 | 0.00 | 0.30 | 0.39 | 0.38 | 0.77 |\n| CD8-positive, alpha-beta thymocyte | 727 | 0.42 | 0.08 | 0.42 | 0.19 | 0.00 | 0.64 | 0.35 | 0.44 | 0.69 |\n| activated CD4-positive, alpha-beta T cell | 568 | 0.04 | 0.00 | 0.40 | 0.04 | 0.00 | 0.17 | 0.13 | 0.15 | 0.32 |\n| myeloid dendritic cell | 500 | 0.11 | 0.18 | 0.48 | 0.25 | 0.00 | 0.20 | 0.21 | 0.25 | 0.36 |\n| platelet | 363 | 0.72 | 0.87 | 0.92 | 0.94 | 0.00 | 0.59 | 0.77 | 0.81 | 0.90 |\n| common myeloid progenitor | 451 | 0.00 | 0.63 | 0.78 | 0.70 | 0.00 | 0.77 | 0.81 | 0.91 | 0.88 |\n| thymocyte | 455 | 0.00 | 0.02 | 0.42 | 0.23 | 0.00 | 0.36 | 0.27 | 0.59 | 0.91 |\n| microglial cell | 315 | 0.11 | 0.04 | 0.42 | 0.04 | 0.00 | 0.44 | 0.23 | 0.23 | 0.45 |\n| colon macrophage | 209 | 0.27 | 0.01 | 0.72 | 0.00 | 0.00 | 0.52 | 0.26 | 0.39 | 0.83 |\n| leukocyte | 187 | 0.09 | 0.01 | 0.34 | 0.01 | 0.00 | 0.16 | 0.16 | 0.20 | 0.43 |\n| hematopoietic cell | 100 | 0.00 | 0.04 | 0.93 | 0.69 | 0.00 | 0.12 | 0.48 | 0.58 | 0.79 |\n| plasmacytoid dendritic cell | 68 | 0.28 | 0.49 | 0.55 | 0.38 | 0.00 | 0.05 | 0.38 | 0.49 | 0.67 |\n| myeloid cell | 81 | 0.00 | 0.00 | 0.22 | 0.00 | 0.00 | 0.31 | 0.18 | 0.40 | 0.84 |\n| Langerhans cell | 76 | 0.27 | 0.27 | 0.73 | 0.53 | 0.00 | 0.10 | 0.25 | 0.31 | 0.51 |\n| T follicular helper cell | 6 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.08 | 0.10 | 0.71 | 0.73 |\n| erythroid lineage cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 |" }