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Update app.py
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app.py
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@@ -4,29 +4,29 @@ from PIL import Image
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from torchvision import transforms
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from TumorModel import TumorClassification, GliomaStageModel
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# Load tumor classification model
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tumor_model = TumorClassification()
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tumor_model.load_state_dict(torch.load("BTD_model.pth", map_location=torch.device("cpu")))
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tumor_model.eval()
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# Load glioma stage model
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glioma_model = GliomaStageModel()
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glioma_model.load_state_dict(torch.load("glioma_stages.pth", map_location=torch.device("cpu")))
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glioma_model.eval()
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# Labels
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tumor_labels = ['glioma', 'meningioma', 'notumor', 'pituitary']
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stage_labels = ['Stage 1', 'Stage 2'
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# Transform
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transform = transforms.Compose([
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transforms.Grayscale(),
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transforms.Resize((
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transforms.ToTensor(),
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transforms.Normalize(mean=[0.5], std=[0.5])
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])
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#
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def predict_tumor(image):
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image = transform(image).unsqueeze(0)
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with torch.no_grad():
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@@ -34,7 +34,7 @@ def predict_tumor(image):
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pred = torch.argmax(out, dim=1).item()
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return tumor_labels[pred]
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#
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def predict_stage(gender, age, idh1, tp53, atrx, pten, egfr, cic, pik3ca):
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gender_val = 0 if gender == "Male" else 1
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features = [gender_val, age, idh1, tp53, atrx, pten, egfr, cic, pik3ca]
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@@ -44,16 +44,16 @@ def predict_stage(gender, age, idh1, tp53, atrx, pten, egfr, cic, pik3ca):
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pred = torch.argmax(out, dim=1).item()
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return stage_labels[pred]
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#
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tumor_tab = gr.Interface(
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fn=predict_tumor,
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inputs=gr.Image(type="pil"),
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outputs=gr.Label(),
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title="π§ Brain Tumor
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description="Upload an MRI image to classify tumor type: glioma, meningioma, notumor, or pituitary."
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)
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#
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stage_tab = gr.Interface(
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fn=predict_stage,
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inputs=[
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@@ -69,11 +69,14 @@ stage_tab = gr.Interface(
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],
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outputs=gr.Label(),
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title="𧬠Glioma Stage Classifier",
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description="Enter
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)
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# Combine
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demo = gr.TabbedInterface(
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# Launch
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demo.launch()
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from torchvision import transforms
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from TumorModel import TumorClassification, GliomaStageModel
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# β
Load tumor classification model
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tumor_model = TumorClassification()
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tumor_model.load_state_dict(torch.load("BTD_model.pth", map_location=torch.device("cpu")))
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tumor_model.eval()
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# β
Load glioma stage classification model
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glioma_model = GliomaStageModel()
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glioma_model.load_state_dict(torch.load("glioma_stages.pth", map_location=torch.device("cpu")))
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glioma_model.eval()
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# β
Labels
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tumor_labels = ['glioma', 'meningioma', 'notumor', 'pituitary']
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stage_labels = ['Stage 1', 'Stage 2', 'Stage 3', 'Stage 4']
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# β
Transform (resize to 208x208 to match training)
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transform = transforms.Compose([
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transforms.Grayscale(),
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transforms.Resize((208, 208)), # <-- important for matching FC input
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transforms.ToTensor(),
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transforms.Normalize(mean=[0.5], std=[0.5])
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])
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# β
Tumor Prediction Function
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def predict_tumor(image):
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image = transform(image).unsqueeze(0)
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with torch.no_grad():
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pred = torch.argmax(out, dim=1).item()
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return tumor_labels[pred]
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# β
Glioma Stage Prediction Function
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def predict_stage(gender, age, idh1, tp53, atrx, pten, egfr, cic, pik3ca):
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gender_val = 0 if gender == "Male" else 1
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features = [gender_val, age, idh1, tp53, atrx, pten, egfr, cic, pik3ca]
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pred = torch.argmax(out, dim=1).item()
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return stage_labels[pred]
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# β
Tumor Detection Tab
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tumor_tab = gr.Interface(
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fn=predict_tumor,
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inputs=gr.Image(type="pil"),
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outputs=gr.Label(),
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title="π§ Brain Tumor Detector",
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description="Upload an MRI image to classify tumor type: glioma, meningioma, notumor, or pituitary."
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)
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# β
Glioma Stage Prediction Tab
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stage_tab = gr.Interface(
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fn=predict_stage,
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inputs=[
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],
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outputs=gr.Label(),
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title="𧬠Glioma Stage Classifier",
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description="Enter mutation and demographic data to classify glioma stage."
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)
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# β
Combine into a tabbed interface
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demo = gr.TabbedInterface(
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[tumor_tab, stage_tab],
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tab_names=["Tumor Detector", "Glioma Stage Predictor"]
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)
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# β
Launch the app
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demo.launch()
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