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data/wgs_sequencing_metrics.json

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+{
+  "instrument": "Illumina NovaSeq 6000",
+  "flowcell_id": "HGWCNDSX7",
+  "sample_id": "EX2312012 (S16)",
+  "read_type": "Paired-End 2x150bp",
+  "total_sequencing_data_gb": 78.86,
+  "lanes": [
+    {
+      "lane": "L001",
+      "r1_file": "WGS_EX2312012_HGWCNDSX7_S16_L001_R1_001.fastq.gz",
+      "r1_size_gb": 9.75,
+      "r2_file": "WGS_EX2312012_HGWCNDSX7_S16_L001_R2_001.fastq.gz",
+      "r2_size_gb": 10.28,
+      "total_reads_m": 204.5,
+      "q30_pct": 93.4,
+      "mean_coverage": 9.2
+    },
+    {
+      "lane": "L002",
+      "r1_file": "WGS_EX2312012_HGWCNDSX7_S16_L002_R1_001.fastq.gz",
+      "r1_size_gb": 9.66,
+      "r2_file": "WGS_EX2312012_HGWCNDSX7_S16_L002_R2_001.fastq.gz",
+      "r2_size_gb": 10.16,
+      "total_reads_m": 202.1,
+      "q30_pct": 93.1,
+      "mean_coverage": 9.0
+    },
+    {
+      "lane": "L003",
+      "r1_file": "WGS_EX2312012_HGWCNDSX7_S16_L003_R1_001.fastq.gz",
+      "r1_size_gb": 9.5,
+      "r2_file": "WGS_EX2312012_HGWCNDSX7_S16_L003_R2_001.fastq.gz",
+      "r2_size_gb": 9.89,
+      "total_reads_m": 198.8,
+      "q30_pct": 93.8,
+      "mean_coverage": 8.9
+    },
+    {
+      "lane": "L004",
+      "r1_file": "WGS_EX2312012_HGWCNDSX7_S16_L004_R1_001.fastq.gz",
+      "r1_size_gb": 9.6,
+      "r2_file": "WGS_EX2312012_HGWCNDSX7_S16_L004_R2_001.fastq.gz",
+      "r2_size_gb": 10.02,
+      "total_reads_m": 200.4,
+      "q30_pct": 93.5,
+      "mean_coverage": 9.1
+    }
+  ],
+  "aggregate": {
+    "total_paired_reads_m": 805.8,
+    "mean_target_coverage": "36.2x",
+    "percent_bases_q30": "93.45%",
+    "mean_insert_size": "380 bp",
+    "gc_content": "41.2%",
+    "duplication_rate": "8.4%"
+  }
+}