{ "id": "acmg_alphamissense", "category": "ACMG & In Silico Predictors", "title": "AlphaMissense Deep Learning Structural Predictions", "description": "AlphaFold-derived structural misfolding scores for candidate missense mutations.", "columns": [ "Gene", "Variant (GRCh38)", "HGVSc", "Raw In Silico Score", "Percentile Rank", "Threshold Interpretation", "ACMG Evidence Code" ], "rows": [ [ "TRIP13", "chr5:895,302", "c.1060G>A", "0.882 / 28.4 Phred", "98.5th Percentile", "Deleterious / Damaging", "PP3 (Strong Computational Support)" ], [ "BUB1B", "chr15:40,205,811", "c.1972C>T", "38.0 Phred", "99.9th Percentile", "Nonsense Truncation", "PVS1 (Very Strong Loss-of-Function)" ], [ "CEP57", "chr11:96,158,214", "c.403C>T", "36.0 Phred", "99.8th Percentile", "Nonsense Stop Gain", "PVS1 (Loss of Microtubule Domain)" ], [ "MAD1L1", "chr7:1,842,504", "c.1852C>T", "0.794 / 26.2 Phred", "96.4th Percentile", "Damaging Missense", "PP3 (Computational Evidence)" ], [ "CEP192", "chr18:12,874,103", "c.1504G>A", "0.741 / 24.1 Phred", "94.2th Percentile", "Likely Damaging", "PP3 (Supporting Evidence)" ], [ "TP53", "chr17:7,675,088", "c.524G>A", "0.962 / 32.0 Phred", "99.7th Percentile", "Structural Oncogenic Driver", "PS1 / PS3 / PP3 (Well-Established Pathogenic)" ], [ "WT1", "chr11:32,417,912", "c.1180C>T", "0.935 / 29.6 Phred", "99.2th Percentile", "Zinc Finger Inactivation", "PS1 / PM1 / PP3 (Pathogenic Hotspot)" ] ], "tags": [ "ACMG", "InSilico", "Pathogenicity" ], "row_count": 7 }