{ "id": "acmg_predictor_evaluation_04", "category": "ACMG & In Silico Predictors", "title": "SpliceAI CNN Pathogenicity Calibration & Machine Learning Performance", "description": "Deleterious threshold calibrations, specificity, and ROC performance for SpliceAI CNN.", "columns": [ "Predictor Parameter", "Algorithm Architecture", "Calibrated Cutoff", "Mitotic Specificity", "Proband Variant Evaluation", "ACMG Evidence Code" ], "rows": [ [ "Algorithm Profile: SpliceAI CNN", "32-Layer Deep Residual Dilated Convolutional Net", "> 0.20 (Splice Altering)", "95.0% Sensitivity", "Identifies Cryptic Splice Hotspots", "PP3 / PS3 Criteria" ], [ "Tested Locus 4A", "Gene Model 4", "Cutoff Delta 0.16", "Deleterious Prediction 4", "ClinVar Score 48", "PS1 / PM1 Validation" ], [ "Tested Locus 4B", "Variant Target 4", "Percentile 95.60%", "Pathogenic Classification 4", "Loss of function rank 4", "PVS1 Support" ], [ "Benchmark ROC 4C", "Empirical Calibration Dataset", "AUC = 0.912", "False positive rate 0.40%", "Calibrated on pediatric sarcoma cohort", "ACMG Consensus Gate" ] ], "tags": [ "ACMG", "InSilico", "SpliceAI" ], "row_count": 4, "columns_count": 6 }