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be56db1
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1 Parent(s): 1b82226

Open Models in a new tab on every page and swap the variant panel headings

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Files changed (6) hide show
  1. causal-variants.html +1 -1
  2. corpus.html +1 -1
  3. factory.html +1 -1
  4. index.html +2 -2
  5. leaderboard.html +1 -1
  6. use-case.html +1 -1
causal-variants.html CHANGED
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  <script src="https://cdnjs.cloudflare.com/ajax/libs/d3/7.9.0/d3.min.js"></script>
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  </head>
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  <body>
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- <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html">Model factory</a><a href="leaderboard.html">Leaderboard</a><a href="causal-variants.html" aria-current="page">Causal variants</a><a href="use-case.html">Use case</a><a href="corpus.html">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1">Models</a></nav></div></header>
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  <div class="page">
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  <main class="prose">
 
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  <script src="https://cdnjs.cloudflare.com/ajax/libs/d3/7.9.0/d3.min.js"></script>
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  </head>
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  <body>
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+ <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html">Model factory</a><a href="leaderboard.html">Leaderboard</a><a href="causal-variants.html" aria-current="page">Causal variants</a><a href="use-case.html">Use case</a><a href="corpus.html">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1" target="_blank" rel="noopener">Models</a></nav></div></header>
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  <div class="page">
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corpus.html CHANGED
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  <script src="https://cdnjs.cloudflare.com/ajax/libs/d3/7.9.0/d3.min.js"></script>
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- <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html">Model factory</a><a href="leaderboard.html">Leaderboard</a><a href="causal-variants.html">Causal variants</a><a href="use-case.html">Use case</a><a href="corpus.html" aria-current="page">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1">Models</a></nav></div></header>
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  <div class="page">
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  <main class="prose">
 
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  <script src="https://cdnjs.cloudflare.com/ajax/libs/d3/7.9.0/d3.min.js"></script>
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  </head>
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  <body>
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+ <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html">Model factory</a><a href="leaderboard.html">Leaderboard</a><a href="causal-variants.html">Causal variants</a><a href="use-case.html">Use case</a><a href="corpus.html" aria-current="page">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1" target="_blank" rel="noopener">Models</a></nav></div></header>
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factory.html CHANGED
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  <script src="https://cdnjs.cloudflare.com/ajax/libs/d3/7.9.0/d3.min.js"></script>
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  </head>
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  <body class="factory">
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- <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html" aria-current="page">Model factory</a><a href="leaderboard.html">Leaderboard</a><a href="causal-variants.html">Causal variants</a><a href="use-case.html">Use case</a><a href="corpus.html">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1">Models</a></nav></div></header>
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  <div class="page">
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  <main class="prose">
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  <p class="kicker">Methods</p>
 
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  <script src="https://cdnjs.cloudflare.com/ajax/libs/d3/7.9.0/d3.min.js"></script>
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  </head>
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  <body class="factory">
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+ <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html" aria-current="page">Model factory</a><a href="leaderboard.html">Leaderboard</a><a href="causal-variants.html">Causal variants</a><a href="use-case.html">Use case</a><a href="corpus.html">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1" target="_blank" rel="noopener">Models</a></nav></div></header>
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index.html CHANGED
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  <a class="text-link" href="corpus.html">Explore the training species <span aria-hidden="true">↗</span></a>
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  </article>
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  <article class="fact">
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- <p class="fact-label">Variant prioritisation</p>
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- <h2>Zero-shot scoring</h2>
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  <p>Botanic1-XL recovers 49.9% of validated causal variants within the top 1% of candidates (~60 variants out of a median of 5,904 per locus), across 545 studies in 14 species, from the sequence and mutation allele alone.</p>
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  <figure class="overview-plot" id="overview-causal" aria-label="Causal-variant recall curves" hidden></figure>
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  <a class="text-link" href="causal-variants.html">Explore the variant benchmark <span aria-hidden="true">↗</span></a>
 
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  <a class="text-link" href="corpus.html">Explore the training species <span aria-hidden="true">↗</span></a>
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  <article class="fact">
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+ <p class="fact-label">Zero-shot scoring</p>
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+ <h2>Variant prioritisation</h2>
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  <p>Botanic1-XL recovers 49.9% of validated causal variants within the top 1% of candidates (~60 variants out of a median of 5,904 per locus), across 545 studies in 14 species, from the sequence and mutation allele alone.</p>
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  <figure class="overview-plot" id="overview-causal" aria-label="Causal-variant recall curves" hidden></figure>
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  <a class="text-link" href="causal-variants.html">Explore the variant benchmark <span aria-hidden="true">↗</span></a>
leaderboard.html CHANGED
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- <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html">Model factory</a><a href="leaderboard.html" aria-current="page">Leaderboard</a><a href="causal-variants.html">Causal variants</a><a href="use-case.html">Use case</a><a href="corpus.html">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1">Models</a></nav></div></header>
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+ <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html">Model factory</a><a href="leaderboard.html" aria-current="page">Leaderboard</a><a href="causal-variants.html">Causal variants</a><a href="use-case.html">Use case</a><a href="corpus.html">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1" target="_blank" rel="noopener">Models</a></nav></div></header>
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- <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html">Model factory</a><a href="leaderboard.html">Leaderboard</a><a href="causal-variants.html">Causal variants</a><a href="use-case.html" aria-current="page">Use case</a><a href="corpus.html">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1">Models</a></nav></div></header>
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  <p class="kicker">Use case</p>
 
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+ <header class="topbar"><div class="inner"><a class="lockup" href="index.html"><div class="wordmark" aria-label="BOTANIC-1"><span class="cell">B</span><span class="cell">O</span><span class="cell">T</span><span class="cell">A</span><span class="cell">N</span><span class="cell">I</span><span class="cell">C</span><span class="cell tok" data-state="masked"><span class="probs"><i></i><i class="top"></i><i></i><i></i></span>?</span></div><span class="org"><svg class="living-models-mark" width="18" height="20" fill="currentColor" aria-hidden="true" focusable="false" xmlns="http://www.w3.org/2000/svg" version="1.1" viewBox="0 0 85.90 91.50"><rect x="55.1000" y="2.1000" width="3.2000" height="53.2000" /><rect x="55.1000" y="61.3000" width="3.2000" height="28.1000" /><rect x="68.9000" y="9.2000" width="3.2000" height="15.5000" /><rect x="68.9000" y="30.6000" width="3.2000" height="51.7000" /><rect x="82.7000" y="24.7000" width="3.2000" height="42.2000" /><rect x="41.4000" y="0.0000" width="3.2000" height="11.6000" /><rect x="41.4000" y="17.5000" width="3.2000" height="74.0000" /><rect x="27.6000" y="2.1000" width="3.2000" height="70.7000" /><rect x="27.6000" y="78.7000" width="3.2000" height="10.6000" /><rect x="13.8000" y="9.2000" width="3.2000" height="25.0000" /><rect x="13.8000" y="40.2000" width="3.2000" height="42.2000" /><rect x="0.0000" y="24.7000" width="3.2000" height="42.2000" /></svg>Living Models</span></a><nav aria-label="Pages"><a href="index.html">Overview</a><a href="factory.html">Model factory</a><a href="leaderboard.html">Leaderboard</a><a href="causal-variants.html">Causal variants</a><a href="use-case.html" aria-current="page">Use case</a><a href="corpus.html">Corpus</a><a class="ext" href="https://huggingface.co/collections/living-models/botanic1" target="_blank" rel="noopener">Models</a></nav></div></header>
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  <p class="kicker">Use case</p>