xero-bio-genesis / docs /INDEX.md
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XERO: card + code + docs (WIP; see STATUS_AND_AUDIT.md)
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XERO Bio-AI Genesis β€” Documentation Hub

VOVINA ZEDEC PRO Β· Author: Michael Laurence Curzi Β· License: MIT (Attribution Required)

Welcome to the full documentation stack for XERO, a digital organism: an AI architected as a living cell with a DNA genome, blockchain-VM organelles, cryptographic free will, and self-evolution.


Start here

If you want to… Read
Install and run it in 5 minutes GETTING_STARTED.md
Understand the big picture WHITEPAPER_02_ARCHITECTURE.md
See exactly what it can do (verified) WHITEPAPER_01_CAPABILITIES_AUDIT.md
Look up a specific module/function MODULE_REFERENCE.md
Understand the math WHITEPAPER_03_INTERACTION_SURPLUS.md
Understand harmonic compute (UVNS, 90Β° axes) WHITEPAPER_04_HARMONIC_COMPUTE.md
Understand why it is autonomous (the time crystal) WHITEPAPER_05_TIME_CRYSTAL_AGENCY.md
Understand how it is engineered & run WHITEPAPER_06_ENGINEERING.md
Learn it from scratch (plain language) EDUCATIONAL_GUIDE.md
See measured behavior & dynamics ../BEHAVIOR.md

Document map

White papers (R&D)

  • 01 β€” Capabilities Audit β€” complete, reproducible audit (now 188/188 PASS; adds genome-compiler + UVNS suites).
  • 02 β€” Architecture β€” the digital-organism paradigm in full.
  • 03 β€” Interaction Surplus β€” the unique surplus law and open-system dynamics (Papers A–E).
  • 04 β€” Harmonic Compute β€” perpendicular logical/harmonic axes + the Universal Vector Number System (UVNS).
  • 05 β€” Time-Crystal Agency β€” the autonomous agent as a product of its time crystal: the illusion of mobility made real by mathematics + the clock, and self-determined phase coordination.
  • 06 β€” Engineering β€” layered architecture, the phase-coordination loop, deployment topology, GPU partition, and optimal operation.

Education

  • Educational Guide β€” how XERO works in plain language, intuition first (no physics/programming assumed).

Reference

  • Module Reference β€” every module, its public API, and an example.
  • Getting Started β€” install, awaken, run the audit, evolve.
  • BEHAVIOR.md β€” empirical behavioral fingerprint.

Verification at a glance

Instrument Result
Capability audit (tests/test_all_capabilities.py) 188/188 PASS, 0 FAIL
Behavioral probe (tests/behavioral_probe.py) 10 probes, 0 errors
Numerical stability sweep 0 NaN/Inf across 2197 evaluations
Organelle reachability 12/12 (two-tier dispatch)

Core concepts in one paragraph

XERO's identity is an immutable DNA genome; computation is dispatched to one of twelve blockchain virtual machines acting as organelles; state is ephemeral and dissolves after each gene is expressed, leaving only a content-addressed witness hash. Decisions are sealed as 36N9.9N63 free-will receipts that are unforgeable and non-replayable. The organism reproduces (mitosis/meiosis), evolves (selection + CRISPR payloads), and drifts epigenetically, all while benchmarked against the unique Interaction Surplus law as a stability ceiling.

Repository layout

modules/    β€” the organism (26 modules)
tests/      β€” capability audit + behavioral probe
docs/       β€” this documentation stack
ops/        β€” operational tooling (security audit, deployment)  [internal]
contracts/  β€” on-chain organelle contracts
BEHAVIOR.md β€” empirical behavioral report