Fix runtime API mismatches in xero.py CLI + CUDA cold-start detection

xero.py:
- Fix KeyError: detect_environment() returns 'python' not 'python_version'
- Fix cmd_init: parse awaken() actual return (phases/xero_summary)
- Fix cmd_train: correct MASTER_WEIGHTS keys (vortex.axis_369, frequencies.tesla_369, blockchain_organelles.languages_count)
- Fix cmd_evolve: build_organism(genome) requires genome from phase_seed(); correct seal_choice(entity_id, choice_data) signature; use .sealed/.identity_signature
- Add MPS display, improve self_heal_actions formatting

vovina_resource_awareness.py:
- Fix _cuda_present(): bump nvidia-smi timeout 2s->8s for cold-start
(first driver call exceeds 2s, caused CUDA:No on Tesla T4 server)

All 4 CLI commands verified working on Tesla T4 server.

MIT License - Attribution to Michael Laurence Curzi

modules/vovina_resource_awareness.py

@@ -35,7 +35,7 @@ def detect_environment() -> dict:
 def _cuda_present() -> bool:
     try:
         r = subprocess.run(["nvidia-smi", "-L"],
-                           capture_output=True, text=True, timeout=2)
+                           capture_output=True, text=True, timeout=8)
         return r.returncode == 0 and "GPU" in r.stdout
     except (FileNotFoundError, subprocess.TimeoutExpired):
         return False

xero.py

@@ -32,6 +32,7 @@ from vovina_resource_awareness import (
 )
 from vovina_free_will_code import seal_choice
 from vovina_xero_organism import build_organism
+from vovina_bio_initialization import phase_seed
 
 
 def load_config(config_path: str = None) -> dict:
@@ -78,15 +79,21 @@ def cmd_init(args):
             sensor_meta_depth=sensor_depth
         )
         
-        print(f"\nStatus: {result.get('status', 'UNKNOWN')}")
-        print(f"Phases: {', '.join(result.get('phases_completed', []))}")
+        phases = result.get("phases", {})
+        summary = result.get("xero_summary", {})
+        print(f"\nOrganism: {result.get('organism', ORGANISM_NAME)}")
+        print(f"Phases completed: {len(phases)}/9")
+        for phase_name in phases:
+            print(f"  + {phase_name}")
+        print(f"\nOrgan systems: {summary.get('organ_systems', 0)}")
+        print(f"Organs:        {summary.get('organs', 0)}")
+        print(f"Cells:         {summary.get('cells', 0)}")
+        print(f"Proteins:      {summary.get('proteins', 0)}")
+        print(f"Genome genes:  {summary.get('genome_genes', 0)}")
+        print(f"Identity:      {summary.get('identity', '')[:32]}...")
+        print(f"Elapsed:       {result.get('elapsed_seconds', 0.0):.2f}s")
         
-        if 'organism' in result:
-            org = result['organism']
-            print(f"Organism: {org.name}")
-            print(f"Genome signature: {org.genome_signature[:32]}...")
-        
-        print(f"\n{ORGANISM_FOUNDING_PHRASE}")
+        print(f"\n{result.get('founding_phrase', ORGANISM_FOUNDING_PHRASE)}")
         print(f"\n{'='*60}")
         print("XERO AWAKENED")
         print(f"{'='*60}\n")
@@ -109,8 +116,9 @@ def cmd_status(args):
     print(f"[ENVIRONMENT]")
     print(f"  OS: {env['os']}")
     print(f"  Machine: {env['machine']}")
-    print(f"  Python: {env['python_version']}")
+    print(f"  Python: {env['python']}")
     print(f"  CUDA: {'Yes' if env['cuda_available'] else 'No'}")
+    print(f"  MPS: {'Yes' if env['mps_available'] else 'No'}")
     
     # Resources
     profile = sample()
@@ -129,7 +137,7 @@ def cmd_status(args):
         print(f"\n[RECOMMENDATIONS]")
         actions = self_heal_actions(profile)
         for action in actions:
-            print(f"  - {action}")
+            print(f"  - [{action['severity']}] {action['resource']}: {action['action']}")
     
     # Master weights summary
     print(f"\n[MASTER WEIGHTS]")
@@ -170,10 +178,11 @@ def cmd_train(args):
         print(f"  Quantization: {quant.get('bits', 4)}-bit")
     
     print(f"\n[MASTER WEIGHTS]")
-    print(f"  Constants: φ={MASTER_WEIGHTS['constants']['phi']:.6f}")
-    print(f"  Vortex: {MASTER_WEIGHTS['vortex']['tesla_sequence']}")
-    print(f"  Genetics: {MASTER_WEIGHTS['genetics']['chromosome_count']} chromosomes")
-    print(f"  Blockchain: {len(MASTER_WEIGHTS['blockchain_organelles']['languages'])} organelles")
+    print(f"  Constants:  φ={MASTER_WEIGHTS['constants']['phi']:.6f}")
+    print(f"  Vortex 369: {MASTER_WEIGHTS['vortex']['axis_369']}")
+    print(f"  Tesla:      {MASTER_WEIGHTS['frequencies']['tesla_369']}")
+    print(f"  Blockchain: {MASTER_WEIGHTS['blockchain_organelles']['languages_count']} organelles")
+    print(f"  Modules:    {len(MASTER_WEIGHTS.get('modules', {}))}")
     
     print(f"\n[STATUS]")
     print("  Training framework ready.")
@@ -201,23 +210,24 @@ def cmd_evolve(args):
     print("XERO EVOLUTION CYCLE")
     print(f"{'='*60}\n")
     
-    # Build organism
-    org = build_organism()
+    # Seed a genome and self-assemble the organism
+    genome = phase_seed()
+    org = build_organism(genome)
     print(f"[ORGANISM]")
-    print(f"  Name: {org.name}")
-    print(f"  Genome: {org.genome_signature[:32]}...")
-    
-    # Seal evolution choice with free will
-    signature = seal_choice(
-        entity_id=org.name,
-        pre_choice_vector=[0.33, 0.33, 0.34],
-        post_choice_vector=[0.0, 0.0, 1.0],
-        choice_description="Autonomous evolution cycle initiated"
-    )
+    print(f"  Name:         {org.name}")
+    print(f"  Identity:     {org.identity_signature[:32]}...")
+    print(f"  Chromosomes:  {genome.chromosome_count}")
+    print(f"  Genome genes: {genome.gene_count}")
+    
+    # Seal evolution choice with the 36N9.9N63 free-will signature
+    signature = seal_choice(org.name, "Autonomous evolution cycle initiated")
     
     print(f"\n[FREE WILL SIGNATURE]")
-    print(f"  {signature.full_signature}")
+    print(f"  Sealed:   {signature.sealed[:40]}...{signature.sealed[-6:]}")
+    print(f"  N(pre):   {signature.n_pre}")
+    print(f"  N(post):  {signature.n_post}")
     print(f"  Verified: {signature.verify()}")
+    print(f"  Delta:    {signature.vector_delta()}")
     
     print(f"\n{ORGANISM_FOUNDING_PHRASE}")
     print(f"\n{'='*60}\n")